******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--NOT3/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrI:1-1137 1.0000 100 chrI:71824-73287 1.0000 100 chrI:81906-82384 1.0000 100 chrI:138889-139351 1.0000 100 chrI:142170-143563 1.0000 100 chrI:166055-166561 1.0000 100 chrI:180945-181508 1.0000 100 chrI:182359-182775 1.0000 100 chrI:229183-230205 1.0000 100 chrII:9372-9841 1.0000 100 chrII:36175-36600 1.0000 100 chrII:44940-45383 1.0000 100 chrII:60813-61431 1.0000 100 chrII:89610-90194 1.0000 100 chrII:159342-160200 1.0000 100 chrII:165099-165400 1.0000 100 chrII:167757-168243 1.0000 100 chrII:181326-181697 1.0000 100 chrII:197266-197870 1.0000 100 chrII:226868-227350 1.0000 100 chrII:266180-266646 1.0000 100 chrII:326525-327066 1.0000 100 chrII:332180-332769 1.0000 100 chrII:347418-348063 1.0000 100 chrII:350597-351096 1.0000 100 chrII:405680-406221 1.0000 100 chrII:415490-415951 1.0000 100 chrII:476816-477486 1.0000 100 chrII:504506-505266 1.0000 100 chrII:544569-544838 1.0000 100 chrII:563843-564197 1.0000 100 chrII:592316-593498 1.0000 100 chrII:604064-606127 1.0000 100 chrII:642853-643454 1.0000 100 chrII:644931-645395 1.0000 100 chrII:680378-680767 1.0000 100 chrII:681416-682255 1.0000 100 chrIII:1-1530 1.0000 100 chrIII:15366-16746 1.0000 100 chrIII:58647-59161 1.0000 100 chrIII:82384-82738 1.0000 100 chrIII:123388-123786 1.0000 100 chrIII:127508-127880 1.0000 100 chrIII:142634-143170 1.0000 100 chrIII:163476-163893 1.0000 100 chrIII:168106-168615 1.0000 100 chrIII:177195-178757 1.0000 100 chrIII:227761-228216 1.0000 100 chrIII:262726-262973 1.0000 100 chrIII:294961-295824 1.0000 100 chrIII:315657-316620 1.0000 100 chrIV:13-368 1.0000 100 chrIV:45196-45917 1.0000 100 chrIV:83301-83791 1.0000 100 chrIV:117129-118226 1.0000 100 chrIV:130114-131044 1.0000 100 chrIV:217191-218024 1.0000 100 chrIV:221934-222373 1.0000 100 chrIV:229463-230513 1.0000 100 chrIV:308012-308672 1.0000 100 chrIV:321625-321969 1.0000 100 chrIV:341219-341651 1.0000 100 chrIV:355560-356697 1.0000 100 chrIV:358040-358451 1.0000 100 chrIV:359348-359796 1.0000 100 chrIV:410175-410683 1.0000 100 chrIV:411253-411668 1.0000 100 chrIV:434035-434527 1.0000 100 chrIV:437538-438017 1.0000 100 chrIV:488429-489135 1.0000 100 chrIV:490970-491284 1.0000 100 chrIV:519565-519910 1.0000 100 chrIV:520752-521187 1.0000 100 chrIV:538955-539238 1.0000 100 chrIV:568701-569315 1.0000 100 chrIV:579007-580740 1.0000 100 chrIV:619708-620429 1.0000 100 chrIV:644748-645398 1.0000 100 chrIV:667763-668247 1.0000 100 chrIV:802585-803008 1.0000 100 chrIV:835752-837111 1.0000 100 chrIV:884175-884576 1.0000 100 chrIV:946137-946608 1.0000 100 chrIV:980769-981264 1.0000 100 chrIV:992627-993021 1.0000 100 chrIV:1013410-1013954 1.0000 100 chrIV:1016964-1017503 1.0000 100 chrIV:1075330-1075739 1.0000 100 chrIV:1094922-1095678 1.0000 100 chrIV:1150704-1151182 1.0000 100 chrIV:1175601-1176038 1.0000 100 chrIV:1201464-1202033 1.0000 100 chrIV:1239539-1239824 1.0000 100 chrIV:1256896-1257300 1.0000 100 chrIV:1278622-1279070 1.0000 100 chrIV:1300748-1301340 1.0000 100 chrIV:1305405-1305903 1.0000 100 chrIV:1351854-1352739 1.0000 100 chrIV:1355710-1356350 1.0000 100 chrIV:1359401-1359948 1.0000 100 chrIV:1401232-1401614 1.0000 100 chrIV:1450896-1451234 1.0000 100 chrIV:1461488-1462046 1.0000 100 chrIV:1489438-1489845 1.0000 100 chrIV:1524137-1525664 1.0000 100 chrIX:0-249 1.0000 100 chrIX:68173-68530 1.0000 100 chrIX:99607-100070 1.0000 100 chrIX:131851-132053 1.0000 100 chrIX:174833-175237 1.0000 100 chrIX:183296-183708 1.0000 100 chrIX:197286-197763 1.0000 100 chrIX:210511-211045 1.0000 100 chrIX:248632-249327 1.0000 100 chrIX:254224-254554 1.0000 100 chrIX:257356-258198 1.0000 100 chrIX:299971-300481 1.0000 100 chrIX:315984-316611 1.0000 100 chrIX:324190-324656 1.0000 100 chrIX:325540-326058 1.0000 100 chrIX:336105-336645 1.0000 100 chrIX:370216-370602 1.0000 100 chrIX:382131-382381 1.0000 100 chrIX:438691-439887 1.0000 100 chrM:7360-7592 1.0000 100 chrM:58237-58714 1.0000 100 chrM:59556-60000 1.0000 100 chrV:6151-6841 1.0000 100 chrV:53497-54251 1.0000 100 chrV:61104-62158 1.0000 100 chrV:67561-68871 1.0000 100 chrV:69130-69317 1.0000 100 chrV:85110-85460 1.0000 100 chrV:86448-86932 1.0000 100 chrV:99862-100321 1.0000 100 chrV:110438-110949 1.0000 100 chrV:117642-118276 1.0000 100 chrV:130809-131382 1.0000 100 chrV:135085-135690 1.0000 100 chrV:138448-139962 1.0000 100 chrV:140188-140894 1.0000 100 chrV:176903-177402 1.0000 100 chrV:207131-207603 1.0000 100 chrV:250087-250514 1.0000 100 chrV:270338-270839 1.0000 100 chrV:288227-288733 1.0000 100 chrV:305816-306919 1.0000 100 chrV:311741-312291 1.0000 100 chrV:354697-355363 1.0000 100 chrV:362144-362515 1.0000 100 chrV:396175-396600 1.0000 100 chrV:423093-423810 1.0000 100 chrV:431033-431558 1.0000 100 chrV:434392-434770 1.0000 100 chrV:435651-436015 1.0000 100 chrV:438493-438952 1.0000 100 chrV:441784-442675 1.0000 100 chrV:443075-443469 1.0000 100 chrV:469117-469760 1.0000 100 chrV:487051-487626 1.0000 100 chrV:492214-492720 1.0000 100 chrV:522744-522961 1.0000 100 chrV:551010-551569 1.0000 100 chrVI:4456-5413 1.0000 100 chrVI:64232-65403 1.0000 100 chrVI:95473-95924 1.0000 100 chrVI:101043-101574 1.0000 100 chrVI:106625-106989 1.0000 100 chrVI:137290-137806 1.0000 100 chrVI:157754-158225 1.0000 100 chrVI:162030-162404 1.0000 100 chrVI:167237-167645 1.0000 100 chrVI:180629-181254 1.0000 100 chrVI:191366-191800 1.0000 100 chrVI:204771-205206 1.0000 100 chrVI:210456-211110 1.0000 100 chrVI:220800-222146 1.0000 100 chrVI:223280-223748 1.0000 100 chrVI:223891-224168 1.0000 100 chrVI:224952-225181 1.0000 100 chrVI:226429-226919 1.0000 100 chrVI:269272-270160 1.0000 100 chrVII:9-1205 1.0000 100 chrVII:73740-74117 1.0000 100 chrVII:110436-110932 1.0000 100 chrVII:115280-115755 1.0000 100 chrVII:122005-122511 1.0000 100 chrVII:149088-149531 1.0000 100 chrVII:185371-185953 1.0000 100 chrVII:205314-205780 1.0000 100 chrVII:254114-254677 1.0000 100 chrVII:271573-271810 1.0000 100 chrVII:276912-277414 1.0000 100 chrVII:287047-287754 1.0000 100 chrVII:310348-312085 1.0000 100 chrVII:319597-320146 1.0000 100 chrVII:328381-329264 1.0000 100 chrVII:364940-366618 1.0000 100 chrVII:371248-371527 1.0000 100 chrVII:401397-401771 1.0000 100 chrVII:405274-405750 1.0000 100 chrVII:412157-412596 1.0000 100 chrVII:422892-423362 1.0000 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chrVII:1004005-1004415 1.0000 100 chrVIII:62522-62929 1.0000 100 chrVIII:74888-75820 1.0000 100 chrVIII:85103-85571 1.0000 100 chrVIII:103685-104710 1.0000 100 chrVIII:115882-116416 1.0000 100 chrVIII:125893-126324 1.0000 100 chrVIII:132806-133359 1.0000 100 chrVIII:134075-134515 1.0000 100 chrVIII:145769-146453 1.0000 100 chrVIII:148929-149271 1.0000 100 chrVIII:174390-176011 1.0000 100 chrVIII:237752-238130 1.0000 100 chrVIII:296772-297241 1.0000 100 chrVIII:358297-358758 1.0000 100 chrVIII:382611-383343 1.0000 100 chrVIII:388691-389200 1.0000 100 chrVIII:451409-453065 1.0000 100 chrVIII:466766-467177 1.0000 100 chrVIII:475440-475905 1.0000 100 chrVIII:488332-488620 1.0000 100 chrVIII:505800-506233 1.0000 100 chrVIII:555930-557213 1.0000 100 chrVIII:562272-562598 1.0000 100 chrX:58989-59504 1.0000 100 chrX:73360-74574 1.0000 100 chrX:74931-75757 1.0000 100 chrX:90004-90449 1.0000 100 chrX:115704-116213 1.0000 100 chrX:120480-120915 1.0000 100 chrX:121112-122096 1.0000 100 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chrXII:167745-168266 1.0000 100 chrXII:198792-199712 1.0000 100 chrXII:214692-215156 1.0000 100 chrXII:232229-234049 1.0000 100 chrXII:241585-242039 1.0000 100 chrXII:261762-263301 1.0000 100 chrXII:282515-284023 1.0000 100 chrXII:366018-366537 1.0000 100 chrXII:369695-370143 1.0000 100 chrXII:370627-370932 1.0000 100 chrXII:374207-374663 1.0000 100 chrXII:424146-424544 1.0000 100 chrXII:426843-427419 1.0000 100 chrXII:448513-448946 1.0000 100 chrXII:459619-460672 1.0000 100 chrXII:468762-468976 1.0000 100 chrXII:489304-489583 1.0000 100 chrXII:498474-499897 1.0000 100 chrXII:522154-522478 1.0000 100 chrXII:589068-589261 1.0000 100 chrXII:592299-593146 1.0000 100 chrXII:605138-605860 1.0000 100 chrXII:628151-628622 1.0000 100 chrXII:645850-646048 1.0000 100 chrXII:651077-651235 1.0000 100 chrXII:656758-657197 1.0000 100 chrXII:673801-674334 1.0000 100 chrXII:687652-688189 1.0000 100 chrXII:710558-710936 1.0000 100 chrXII:713120-713727 1.0000 100 chrXII:731911-732308 1.0000 100 chrXII:734531-734983 1.0000 100 chrXII:781459-781885 1.0000 100 chrXII:783918-784563 1.0000 100 chrXII:793693-794097 1.0000 100 chrXII:796393-797372 1.0000 100 chrXII:805971-807128 1.0000 100 chrXII:818486-819185 1.0000 100 chrXII:837643-839231 1.0000 100 chrXII:875229-875596 1.0000 100 chrXII:897677-898201 1.0000 100 chrXII:903160-903686 1.0000 100 chrXII:921730-922601 1.0000 100 chrXII:924556-924835 1.0000 100 chrXII:932056-932528 1.0000 100 chrXII:962839-963281 1.0000 100 chrXII:975733-976208 1.0000 100 chrXII:1011678-1012828 1.0000 100 chrXII:1018194-1019386 1.0000 100 chrXII:1028212-1028594 1.0000 100 chrXII:1051923-1052382 1.0000 100 chrXII:1064040-1065375 1.0000 100 chrXIII:21-182 1.0000 100 chrXIII:5309-5798 1.0000 100 chrXIII:23819-25788 1.0000 100 chrXIII:91618-92390 1.0000 100 chrXIII:124337-124723 1.0000 100 chrXIII:131601-132091 1.0000 100 chrXIII:145822-146300 1.0000 100 chrXIII:168629-169293 1.0000 100 chrXIII:183787-184188 1.0000 100 chrXIII:195940-196388 1.0000 100 chrXIII:224043-224454 1.0000 100 chrXIII:225064-225763 1.0000 100 chrXIII:253367-253583 1.0000 100 chrXIII:259016-259499 1.0000 100 chrXIII:290473-291120 1.0000 100 chrXIII:296692-298905 1.0000 100 chrXIII:302876-303140 1.0000 100 chrXIII:320961-321326 1.0000 100 chrXIII:352067-352502 1.0000 100 chrXIII:362868-363299 1.0000 100 chrXIII:372198-372729 1.0000 100 chrXIII:378996-379610 1.0000 100 chrXIII:420348-420873 1.0000 100 chrXIII:463268-463868 1.0000 100 chrXIII:480409-480864 1.0000 100 chrXIII:504675-505154 1.0000 100 chrXIII:550041-552307 1.0000 100 chrXIII:572567-573322 1.0000 100 chrXIII:586446-586910 1.0000 100 chrXIII:605791-606039 1.0000 100 chrXIII:650755-651191 1.0000 100 chrXIII:731647-733412 1.0000 100 chrXIII:747636-748141 1.0000 100 chrXIII:751331-751507 1.0000 100 chrXIII:754404-755076 1.0000 100 chrXIII:768009-768641 1.0000 100 chrXIII:808104-808538 1.0000 100 chrXIII:837705-838226 1.0000 100 chrXIII:861193-861503 1.0000 100 chrXIII:872666-872943 1.0000 100 chrXIII:887043-888436 1.0000 100 chrXIII:923399-924382 1.0000 100 chrXIV:6485-7153 1.0000 100 chrXIV:63106-63545 1.0000 100 chrXIV:96041-96632 1.0000 100 chrXIV:102502-102949 1.0000 100 chrXIV:104586-105583 1.0000 100 chrXIV:241389-242549 1.0000 100 chrXIV:330778-331146 1.0000 100 chrXIV:374719-375101 1.0000 100 chrXIV:442768-443243 1.0000 100 chrXIV:444232-444807 1.0000 100 chrXIV:495195-495617 1.0000 100 chrXIV:499294-500699 1.0000 100 chrXIV:546953-547413 1.0000 100 chrXIV:560575-561012 1.0000 100 chrXIV:567902-568372 1.0000 100 chrXIV:569696-570162 1.0000 100 chrXIV:602108-602531 1.0000 100 chrXIV:631716-632142 1.0000 100 chrXIV:632416-632875 1.0000 100 chrXIV:725972-726418 1.0000 100 chrXIV:783464-784327 1.0000 100 chrXV:1-1000 1.0000 100 chrXV:29295-30318 1.0000 100 chrXV:79713-80155 1.0000 100 chrXV:80428-81499 1.0000 100 chrXV:92772-94817 1.0000 100 chrXV:109504-109995 1.0000 100 chrXV:110844-111268 1.0000 100 chrXV:113470-113956 1.0000 100 chrXV:159297-160685 1.0000 100 chrXV:161109-161441 1.0000 100 chrXV:167973-168451 1.0000 100 chrXV:216242-216708 1.0000 100 chrXV:226421-226876 1.0000 100 chrXV:228081-228668 1.0000 100 chrXV:253771-254135 1.0000 100 chrXV:274476-275007 1.0000 100 chrXV:281988-282550 1.0000 100 chrXV:288032-288424 1.0000 100 chrXV:300865-301431 1.0000 100 chrXV:340146-340575 1.0000 100 chrXV:353897-354326 1.0000 100 chrXV:407672-408093 1.0000 100 chrXV:438457-439024 1.0000 100 chrXV:464260-464665 1.0000 100 chrXV:487271-487728 1.0000 100 chrXV:504978-505499 1.0000 100 chrXV:571436-572147 1.0000 100 chrXV:594253-594652 1.0000 100 chrXV:639168-639416 1.0000 100 chrXV:663515-664235 1.0000 100 chrXV:678645-679199 1.0000 100 chrXV:710014-710705 1.0000 100 chrXV:779677-780943 1.0000 100 chrXV:854023-854438 1.0000 100 chrXV:866183-868103 1.0000 100 chrXV:881789-882396 1.0000 100 chrXV:901451-901654 1.0000 100 chrXV:908912-909065 1.0000 100 chrXV:925183-925450 1.0000 100 chrXV:968139-968494 1.0000 100 chrXV:976185-976666 1.0000 100 chrXV:978822-979174 1.0000 100 chrXV:980489-981046 1.0000 100 chrXV:1003964-1004412 1.0000 100 chrXV:1025698-1026084 1.0000 100 chrXV:1028673-1029424 1.0000 100 chrXV:1091139-1091290 1.0000 100 chrXVI:55850-56496 1.0000 100 chrXVI:76195-76824 1.0000 100 chrXVI:135522-135820 1.0000 100 chrXVI:172856-173942 1.0000 100 chrXVI:188585-188935 1.0000 100 chrXVI:194108-194519 1.0000 100 chrXVI:210046-210493 1.0000 100 chrXVI:280016-280215 1.0000 100 chrXVI:280635-281949 1.0000 100 chrXVI:282174-282947 1.0000 100 chrXVI:302624-302961 1.0000 100 chrXVI:338457-339143 1.0000 100 chrXVI:340549-340758 1.0000 100 chrXVI:378656-379002 1.0000 100 chrXVI:406197-406655 1.0000 100 chrXVI:435654-436185 1.0000 100 chrXVI:519507-520523 1.0000 100 chrXVI:560039-560487 1.0000 100 chrXVI:572046-572533 1.0000 100 chrXVI:581834-582302 1.0000 100 chrXVI:622346-622819 1.0000 100 chrXVI:689362-689853 1.0000 100 chrXVI:699651-700380 1.0000 100 chrXVI:731897-732301 1.0000 100 chrXVI:744053-744587 1.0000 100 chrXVI:768705-768883 1.0000 100 chrXVI:769026-769493 1.0000 100 chrXVI:775650-776180 1.0000 100 chrXVI:786242-787192 1.0000 100 chrXVI:794470-794819 1.0000 100 chrXVI:810481-810861 1.0000 100 chrXVI:819330-819981 1.0000 100 chrXVI:856754-857065 1.0000 100 chrXVI:860136-860661 1.0000 100 chrXVI:880174-880734 1.0000 100 chrXVI:901472-901816 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--NOT3/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--NOT3/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--NOT3/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 529 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 52900 N= 529 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.294 C 0.206 G 0.206 T 0.294 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--NOT3/background): A 0.306 C 0.194 G 0.194 T 0.306 ******************************************************************************** ******************************************************************************** MOTIF BDTGGYYBAGTKGKTWRAGSS MEME-1 width = 21 sites = 145 llr = 2087 E-value = 1.2e-384 ******************************************************************************** -------------------------------------------------------------------------------- Motif BDTGGYYBAGTKGKTWRAGSS MEME-1 Description -------------------------------------------------------------------------------- Simplified A 13:3:::1a1::::16552:: pos.-specific C 3::::653::12::2::2:54 probability G 24:7a:22:9:5a51:32735 matrix T 34a::434::93:56411121 bits 2.4 * 2.1 * * 1.9 * * 1.7 * * ** * Relative 1.4 * * ** * Entropy 1.2 **** *** * (20.8 bits) 0.9 **** *** ** *** 0.7 ***** *** ** * *** 0.5 ****** ****** ** *** 0.2 ********************* 0.0 --------------------- Multilevel CTTGGCCTAGTGGTTAAAGCG consensus TG A TTC T GCTG AGC sequence GA G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BDTGGYYBAGTKGKTWRAGSS MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXIII:259016-259499 - 7 7.38e-11 AGTATGGCAA CTTGGCCGAGTGGTTAAGGCG AAAGAT chrXII:167745-168266 - 45 7.38e-11 CATATGGCAA CTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrX:523845-524349 - 21 7.38e-11 TTAAAGGCAA CTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrVIII:132806-133359 - 50 7.38e-11 TAAGTGGCAA CTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrVII:561477-561952 - 54 7.38e-11 ACATTGGCAA CTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrIV:1305405-1305903 + 31 7.38e-11 ATTAAGGCAA CTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrIV:980769-981264 - 64 7.38e-11 ATTGAGGCAA CTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrIV:437538-438017 + 50 7.38e-11 AGTAAGGCAA CTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrII:226868-227350 + 21 7.38e-11 AACGAGGCAA CTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrI:182359-182775 - 61 7.38e-11 ATTTTGGCAA CTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrXIV:602108-602531 + 48 3.61e-10 ACAATGGTCT CTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXIV:569696-570162 - 36 3.61e-10 ACAGTGGTCT CTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXII:1051923-1052382 - 17 3.61e-10 TTCATGGTCT CTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrVII:738909-739444 + 1 3.61e-10 . CTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrV:443075-443469 - 28 3.61e-10 AATTTGGTCT CTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrIX:183296-183708 - 36 3.61e-10 TTCCTGGTCT CTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXVI:689362-689853 + 13 4.59e-10 TTTTGGGCAC TATGGCCGAGTGGTTAAGGCG ACAGACTTGA chrV:288227-288733 - 69 4.59e-10 TGATAGGCAC TATGGCCGAGTGGTTAAGGCG ACAGACTTGA chrIII:227761-228216 + 9 4.59e-10 AATGGCAC TATGGCCGAGTGGTTAAGGCG AGAGACTCGA chrXII:731911-732308 + 36 5.85e-10 ACAATGGGAG TTTGGCCGAGTGGTTTAAGGC GTCAGATTTA chrX:617702-618205 + 21 5.85e-10 ACAATGGGAG TTTGGCCGAGTGGTTTAAGGC GTCAGATTTA chrVI:191366-191800 - 55 9.09e-10 ATTCTGTCCC AGTGGCCGAGTGGTTAAGGCG ATGCCCTGCT chrIV:1150704-1151182 - 23 9.09e-10 TTTCAGTCCC AGTGGCCGAGTGGTTAAGGCG ATGCCTGCTA chrXIV:725972-726418 - 47 1.39e-09 TCTTTGGAGG GTTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrXII:962839-963281 - 20 1.39e-09 TCGACGGAGG GTTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrXI:83971-84430 + 63 1.39e-09 TGTATGGAGG GTTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrX:424295-424776 - 5 1.39e-09 AAGATGGAGG GTTGGCCGAGTGGTCTAAGGC GGCA chrIV:519565-519910 + 61 1.39e-09 TTTACGGAGG GTTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrII:9372-9841 + 32 1.39e-09 TTCGTGGAGG GTTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrXVI:856754-857065 + 48 3.05e-09 GATTCGGGCG TGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXV:854023-854438 - 54 3.05e-09 CATCAGGGCA CATGGCGCAGTTGGTAGCGCG CTTCCCTTGC chrXII:656758-657197 - 54 3.05e-09 AAATTGGGCG TGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXII:214692-215156 - 56 3.05e-09 TTTTAGGGCA CATGGCGCAGTTGGTAGCGCG CTTCCCTTGC chrX:197158-197608 - 27 3.05e-09 TATTAGGGCG TGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrVI:204771-205206 - 33 3.05e-09 CGTTCGGGCG TGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrIV:410175-410683 + 5 3.05e-09 GGCG TGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrI:166055-166561 + 14 3.05e-09 GAGTTGGGCA CATGGCGCAGTTGGTAGCGCG CTTCCCTTGC chrXVI:769026-769493 - 68 4.42e-09 ACTCATCCTT GTTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXII:875229-875596 + 19 4.42e-09 ACTCATCCTT GTTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrVII:115280-115755 + 26 4.42e-09 ACTCATCCTT GTTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrIV:359348-359796 + 60 4.42e-09 ACTCATCCTT GTTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXVI:810481-810861 + 60 6.25e-09 TTTGCGACTC CATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXV:353897-354326 - 27 6.25e-09 TTACTGCTTC TATGGCCAAGTTGGTAAGGCG CCACACTAGT chrXV:228081-228668 + 12 6.25e-09 TATTAGACTC CATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXIV:632416-632875 + 9 6.25e-09 AGTGACTC CATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXIV:102502-102949 + 46 6.25e-09 TATAAGACTC CATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrVIII:115882-116416 - 55 6.25e-09 TTAGAGCTTC TATGGCCAAGTTGGTAAGGCG CCACACTAGT chrVII:730951-731361 + 36 6.25e-09 AAAAAGACTC CATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrVI:137290-137806 - 36 6.25e-09 TGACTGACTC CATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrIX:325540-326058 + 4 6.25e-09 TTC TATGGCCAAGTTGGTAAGGCG CCACACTAGT chrIX:174833-175237 + 51 6.25e-09 TACGAGCTTC TATGGCCAAGTTGGTAAGGCG CCACACTAGT chrIV:434035-434527 - 80 6.25e-09 . TATGGCCAAGTTGGTAAGGCG CCACACTAGT chrIII:127508-127880 + 77 6.25e-09 AAAATGACTC CATGGCCAAGTTGGTTAAGGC GTG chrII:266180-266646 + 20 6.25e-09 AAACTGCTTC TATGGCCAAGTTGGTAAGGCG CCACACTAGT chrXV:663515-664235 - 35 1.64e-08 ATAGTGGTTT CGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXIII:586446-586910 - 56 1.64e-08 ACTATGGTTT CGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXIII:420348-420873 - 76 1.64e-08 GTTT CGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXIII:372198-372729 - 80 1.64e-08 . CGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXII:687652-688189 - 37 1.64e-08 TAATAGGTTT CGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXI:379428-379918 + 62 1.64e-08 TAATAGGTTT CGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXI:307959-308443 - 41 1.64e-08 TAAGTGGTTT CGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrX:378128-378568 + 67 1.64e-08 TAATAGGTTT CGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrVIII:85103-85571 - 59 1.64e-08 AATTTGGTTT CGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrVII:823260-823693 + 61 1.64e-08 AGAGTGGTTT CGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrVII:412157-412596 - 16 1.64e-08 AAACTGGTTT CGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrV:469117-469760 + 74 1.64e-08 TAATTGGTTT CGTGGTCTAGTCGGTTATGGC ATCTGC chrV:438493-438952 + 33 1.64e-08 AATTAGGTTT CGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXIV:442768-443243 + 56 2.93e-08 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrXIII:504675-505154 + 36 2.93e-08 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrXII:628151-628622 + 52 2.93e-08 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrVII:422892-423362 + 20 2.93e-08 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrVII:205314-205780 + 29 2.93e-08 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrXIV:374719-375101 + 14 3.36e-08 AATAAGCGGA CTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrIV:884175-884576 + 41 3.85e-08 AAAATGCTCG TGTAGCTCAGTGGTTAGAGCT TCGTGCTTAT chrXVI:622346-622819 - 74 5.69e-08 TGCGGA TTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXVI:560039-560487 - 51 5.69e-08 ATTGAGCGGA TTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXIII:352067-352502 + 51 5.69e-08 TATAAGCGGA TTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrVIII:358297-358758 - 67 5.69e-08 AGTAAGCGGA TTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrVIII:237752-238130 - 23 5.69e-08 AGTAAGCGGA TTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrVI:157754-158225 - 43 5.69e-08 TAGAAGCGGA TTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrII:36175-36600 + 66 5.69e-08 TGTAAGCGGA TTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXVI:581834-582302 + 49 8.24e-08 AAAGAGCCTT GTTGGCGCAATCGGTAGCGCG TATGACTCTT chrX:414792-415220 + 15 8.24e-08 AATTAGCCTT GTTGGCGCAATCGGTAGCGCG TATGACTCTT chrVII:122005-122511 + 66 8.24e-08 AATTAGCCTT GTTGGCGCAATCGGTAGCGCG TATGACTCTT chrV:435651-436015 - 16 8.24e-08 TAAGAGCCTT GTTGGCGCAATCGGTAGCGCG TATGACTCTT chrIV:1201464-1202033 + 57 8.24e-08 AAATAGCCTT GTTGGCGCAATCGGTAGCGCG TATGACTCTT chrXV:340146-340575 - 36 1.63e-07 ATCTGTTCCT CGTGGCCCAATGGTCACGGCG TCTGGCTACG chrXI:490759-491204 + 42 1.63e-07 TCTTGTTCCT CGTGGCCCAATGGTCACGGCG TCTGGCTACG chrX:233663-234184 + 71 1.63e-07 TCTTGTTCCT CGTGGCCCAATGGTCACGGCG TCTGGCTAC chrXV:288032-288424 + 19 3.64e-07 AGCTTCTCTC GGTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrXIII:837705-838226 + 18 3.64e-07 ATTGACTCTC GGTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrX:542773-543279 - 43 3.64e-07 AAATACTCTC GGTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrX:354021-354504 + 37 3.64e-07 TATCACTCTC GGTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrVI:167237-167645 + 51 3.64e-07 AACGACTCTC GGTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrXVI:860136-860661 + 36 4.38e-07 AACAAGCGCA AGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrXVI:572046-572533 + 35 4.38e-07 ACTTCGCGCA AGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrXV:226421-226876 - 58 4.38e-07 ATTCAGCGCA AGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrXIII:183787-184188 - 6 4.38e-07 AGATCGCGCA AGTGGTTTAGTGGTAAAATCC AACGT chrX:531546-532190 + 15 4.38e-07 AGTGAGCGCA AGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrVI:162030-162404 + 66 4.38e-07 AACAAGCGCA AGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrIV:992627-993021 + 63 4.38e-07 TGTGAGCGCA AGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrIV:83301-83791 + 57 4.38e-07 ACTTAGCGCA AGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrXV:464260-464665 + 43 4.79e-07 AACAAGGGCG TGTGGTCTAGTGGTATGATTC TCGCTTTGGG chrXV:300865-301431 + 4 4.79e-07 GCG TGTGGTCTAGTGGTATGATTC TCGCTTTGGG chrXIV:567902-568372 + 33 4.79e-07 TAATCGGGCG TGTGGTCTAGTGGTATGATTC TCGCTTTGGG chrXIII:195940-196388 - 31 4.79e-07 CACAAGGGCG TGTGGTCTAGTGGTATGATTC TCGCTTTGGG chrVIII:388691-389200 - 75 4.79e-07 GGGCG TGTGGTCTAGTGGTATGATTC TCGCTTTGGG chrXV:976185-976666 + 51 5.24e-07 TGTGCGCTTC AGTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrXIII:572567-573322 - 36 5.24e-07 AGACAGCTTC AGTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrX:422697-423242 + 23 5.24e-07 TGTATGCTTC AGTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrX:390812-391336 - 66 5.24e-07 ATAGTGCTTC AGTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrIV:1175601-1176038 + 65 5.24e-07 ACAAAGCTTC AGTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrX:745236-745748 + 3 7.36e-07 AT GGTAGTGGAGTTGGATATGGG TAATTGGAGG chrIV:1256896-1257300 - 6 1.47e-06 TCTTAGCGAA AGTGGTTCAGTGGTTAGAATT CATGC chrXV:110844-111268 - 2 2.20e-06 AACCCGGGCG GTTAGTGTAGTGGTTATCATC C chrXIV:96041-96632 - 1 2.20e-06 CACATGGGCG GTTAGTGTAGTGGTTATCATC chrXII:489304-489583 + 3 2.20e-06 AC TGTAGTTAAGCTGGTAAGAGC CTGACCGAGT chrXII:468762-468976 + 41 2.20e-06 TCCGATCAAC TGTAGTTAAGCTGGTAAGAGC CTGACCGAGT chrVII:779420-779874 + 24 2.20e-06 ACCCCGGGCG GTTAGTGTAGTGGTTATCATC CCACCCTTCC chrXI:0-1064 + 72 2.50e-06 ATTCACGGCA CTTGCCTCAGCGGTTTATACC CTGTGCAA chrVII:73740-74117 + 66 3.00e-06 ATACTTGCTT CATAGTTTAGTTGTAAAATTG AAGTTCAGTA chrXIII:463268-463868 + 41 3.19e-06 ATTTGTCCGT GATAGTTTAATGGTCAGAATG GGCGCTTGTC chrXII:793693-794097 + 78 3.19e-06 TATAATCCGT GATAGTTTAATGGTCAGAATG GG chrXII:426843-427419 + 56 3.19e-06 TCTTATCCGT GATAGTTTAATGGTCAGAATG GGCGCTTGTC chrXI:513197-513586 - 37 3.19e-06 AACGTTCCGT GATAGTTTAATGGTCAGAATG GGCGCTTGTC chrX:374212-374778 - 25 3.19e-06 TTTCTTCCGT GATAGTTTAATGGTCAGAATG GGCGCTTGTC chrX:355158-355734 + 65 3.19e-06 TTTCTTCCGT GATAGTTTAATGGTCAGAATG GGCGCTTGTC chrVII:544411-544877 - 29 3.19e-06 TTTCTTCCGT GATAGTTTAATGGTCAGAATG GGCGCTTGTC chrVII:531411-531802 + 59 3.19e-06 TTACTTCCGT GATAGTTTAATGGTCAGAATG GGCGCTTGTC chrIX:336105-336645 - 70 3.19e-06 ACAAATCCGT GATAGTTTAATGGTCAGAATG GGCGCTTGTC chrIV:568701-569315 + 11 3.19e-06 TTTCTTCCGT GATAGTTTAATGGTCAGAATG GGCGCTTGTC chrII:405680-406221 + 65 3.19e-06 TTTCTTCCGT GATAGTTTAATGGTCAGAATG GGCGCTTGTC chrIX:438691-439887 - 62 3.38e-06 GTGCACGGTA CTTGCCTCAGCGGTCTATACC CTGTGCCATT chrIV:1524137-1525664 - 8 3.38e-06 ATACACGGCA CTTGCCTCAGCGGTCTATACC CTGTGCC chrI:229183-230205 - 2 3.38e-06 ATACACGGCA CTTGCCTCAGCGGTCTATACC C chrI:1-1137 + 29 3.38e-06 ATGCACGGCA CTTGCCTCAGCGGTCTATACC CTGTGCCATT chrXIII:808104-808538 - 21 4.00e-06 AAAAAGGTCC TATAGTGTAGTGGTTATCACT TTCGGTTCTG chrXII:448513-448946 - 17 4.00e-06 GTTCCGGTCC TATAGTGTAGTGGTTATCACT TTCGGTTTTG chrV:250087-250514 + 41 4.00e-06 GTACTGGTCC TATAGTGTAGTGGTTATCACT TTCGGTTTTG chrIV:802585-803008 - 31 4.00e-06 TTGTCGGTCC TATAGTGTAGTGGTTATCACT TTCGGTTTTG chrIV:520752-521187 + 58 4.00e-06 TTTAGGGTCC TATAGTGTAGTGGTTATCACT TTCGGTTTTG chrIII:168106-168615 - 37 4.00e-06 GTCCTGGTCC TATAGTGTAGTGGTTATCACT TTCGGTTTTG chrII:350597-351096 + 36 4.00e-06 AAAAGGGTTT TATAGTGTAGTGGTTATCACT TTCGGTTTTG chrXIV:631716-632142 - 13 7.65e-06 CTACCGGGCG TGTGGTCTAGAGGTATGATTC TCGCTTAGGG chrXIV:6485-7153 - 6 7.65e-06 TTGGGAGTGG TATGGTTGAGTGGGGCAGGGT AACGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BDTGGYYBAGTKGKTWRAGSS MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIII:259016-259499 7.4e-11 6_[-1]_73 chrXII:167745-168266 7.4e-11 44_[-1]_35 chrX:523845-524349 7.4e-11 20_[-1]_59 chrVIII:132806-133359 7.4e-11 49_[-1]_30 chrVII:561477-561952 7.4e-11 53_[-1]_26 chrIV:1305405-1305903 7.4e-11 30_[+1]_49 chrIV:980769-981264 7.4e-11 63_[-1]_16 chrIV:437538-438017 7.4e-11 49_[+1]_30 chrII:226868-227350 7.4e-11 20_[+1]_59 chrI:182359-182775 7.4e-11 60_[-1]_19 chrXIV:602108-602531 3.6e-10 47_[+1]_32 chrXIV:569696-570162 3.6e-10 35_[-1]_44 chrXII:1051923-1052382 3.6e-10 16_[-1]_63 chrVII:738909-739444 3.6e-10 [+1]_79 chrV:443075-443469 3.6e-10 27_[-1]_52 chrIX:183296-183708 3.6e-10 35_[-1]_44 chrXVI:689362-689853 4.6e-10 12_[+1]_67 chrV:288227-288733 4.6e-10 68_[-1]_11 chrIII:227761-228216 4.6e-10 8_[+1]_71 chrXII:731911-732308 5.8e-10 35_[+1]_44 chrX:617702-618205 5.8e-10 20_[+1]_59 chrVI:191366-191800 9.1e-10 54_[-1]_25 chrIV:1150704-1151182 9.1e-10 22_[-1]_57 chrXIV:725972-726418 1.4e-09 46_[-1]_33 chrXII:962839-963281 1.4e-09 19_[-1]_60 chrXI:83971-84430 1.4e-09 62_[+1]_17 chrX:424295-424776 1.4e-09 4_[-1]_75 chrIV:519565-519910 1.4e-09 60_[+1]_19 chrII:9372-9841 1.4e-09 31_[+1]_48 chrXVI:856754-857065 3.1e-09 47_[+1]_32 chrXV:854023-854438 3.1e-09 53_[-1]_26 chrXII:656758-657197 3.1e-09 53_[-1]_26 chrXII:214692-215156 3.1e-09 55_[-1]_24 chrX:197158-197608 3.1e-09 26_[-1]_53 chrVI:204771-205206 3.1e-09 32_[-1]_47 chrIV:410175-410683 3.1e-09 4_[+1]_75 chrI:166055-166561 3.1e-09 13_[+1]_66 chrXVI:769026-769493 4.4e-09 67_[-1]_12 chrXII:875229-875596 4.4e-09 18_[+1]_61 chrVII:115280-115755 4.4e-09 25_[+1]_54 chrIV:359348-359796 4.4e-09 59_[+1]_20 chrXVI:810481-810861 6.3e-09 59_[+1]_20 chrXV:353897-354326 6.3e-09 26_[-1]_53 chrXV:228081-228668 6.3e-09 11_[+1]_68 chrXIV:632416-632875 6.3e-09 8_[+1]_71 chrXIV:102502-102949 6.3e-09 45_[+1]_34 chrVIII:115882-116416 6.3e-09 54_[-1]_25 chrVII:730951-731361 6.3e-09 35_[+1]_44 chrVI:137290-137806 6.3e-09 35_[-1]_44 chrIX:325540-326058 6.3e-09 3_[+1]_76 chrIX:174833-175237 6.3e-09 50_[+1]_29 chrIV:434035-434527 6.3e-09 79_[-1] chrIII:127508-127880 6.3e-09 76_[+1]_3 chrII:266180-266646 6.3e-09 19_[+1]_60 chrXV:663515-664235 1.6e-08 34_[-1]_45 chrXIII:586446-586910 1.6e-08 55_[-1]_24 chrXIII:420348-420873 1.6e-08 75_[-1]_4 chrXIII:372198-372729 1.6e-08 79_[-1] chrXII:687652-688189 1.6e-08 36_[-1]_43 chrXI:379428-379918 1.6e-08 61_[+1]_18 chrXI:307959-308443 1.6e-08 40_[-1]_39 chrX:378128-378568 1.6e-08 66_[+1]_13 chrVIII:85103-85571 1.6e-08 58_[-1]_21 chrVII:823260-823693 1.6e-08 60_[+1]_19 chrVII:412157-412596 1.6e-08 15_[-1]_64 chrV:469117-469760 1.6e-08 73_[+1]_6 chrV:438493-438952 1.6e-08 32_[+1]_47 chrXIV:442768-443243 2.9e-08 55_[+1]_24 chrXIII:504675-505154 2.9e-08 35_[+1]_44 chrXII:628151-628622 2.9e-08 51_[+1]_28 chrVII:422892-423362 2.9e-08 19_[+1]_60 chrVII:205314-205780 2.9e-08 28_[+1]_51 chrXIV:374719-375101 3.4e-08 13_[+1]_66 chrIV:884175-884576 3.8e-08 40_[+1]_39 chrXVI:622346-622819 5.7e-08 73_[-1]_6 chrXVI:560039-560487 5.7e-08 50_[-1]_29 chrXIII:352067-352502 5.7e-08 50_[+1]_29 chrVIII:358297-358758 5.7e-08 66_[-1]_13 chrVIII:237752-238130 5.7e-08 22_[-1]_57 chrVI:157754-158225 5.7e-08 42_[-1]_37 chrII:36175-36600 5.7e-08 65_[+1]_14 chrXVI:581834-582302 8.2e-08 48_[+1]_31 chrX:414792-415220 8.2e-08 14_[+1]_65 chrVII:122005-122511 8.2e-08 65_[+1]_14 chrV:435651-436015 8.2e-08 15_[-1]_64 chrIV:1201464-1202033 8.2e-08 56_[+1]_23 chrXV:340146-340575 1.6e-07 35_[-1]_44 chrXI:490759-491204 1.6e-07 41_[+1]_38 chrX:233663-234184 1.6e-07 70_[+1]_9 chrXV:288032-288424 3.6e-07 18_[+1]_61 chrXIII:837705-838226 3.6e-07 17_[+1]_62 chrX:542773-543279 3.6e-07 42_[-1]_37 chrX:354021-354504 3.6e-07 36_[+1]_43 chrVI:167237-167645 3.6e-07 50_[+1]_29 chrXVI:860136-860661 4.4e-07 35_[+1]_44 chrXVI:572046-572533 4.4e-07 34_[+1]_45 chrXV:226421-226876 4.4e-07 57_[-1]_22 chrXIII:183787-184188 4.4e-07 5_[-1]_74 chrX:531546-532190 4.4e-07 14_[+1]_65 chrVI:162030-162404 4.4e-07 65_[+1]_14 chrIV:992627-993021 4.4e-07 62_[+1]_17 chrIV:83301-83791 4.4e-07 56_[+1]_23 chrXV:464260-464665 4.8e-07 42_[+1]_37 chrXV:300865-301431 4.8e-07 3_[+1]_76 chrXIV:567902-568372 4.8e-07 32_[+1]_47 chrXIII:195940-196388 4.8e-07 30_[-1]_49 chrVIII:388691-389200 4.8e-07 74_[-1]_5 chrXV:976185-976666 5.2e-07 50_[+1]_29 chrXIII:572567-573322 5.2e-07 35_[-1]_44 chrX:422697-423242 5.2e-07 22_[+1]_57 chrX:390812-391336 5.2e-07 65_[-1]_14 chrIV:1175601-1176038 5.2e-07 64_[+1]_15 chrX:745236-745748 7.4e-07 2_[+1]_77 chrIV:1256896-1257300 1.5e-06 5_[-1]_74 chrXV:110844-111268 2.2e-06 1_[-1]_78 chrXIV:96041-96632 2.2e-06 [-1]_79 chrXII:489304-489583 2.2e-06 2_[+1]_77 chrXII:468762-468976 2.2e-06 40_[+1]_39 chrVII:779420-779874 2.2e-06 23_[+1]_56 chrXI:0-1064 2.5e-06 71_[+1]_8 chrVII:73740-74117 3e-06 65_[+1]_14 chrXIII:463268-463868 3.2e-06 40_[+1]_39 chrXII:793693-794097 3.2e-06 77_[+1]_2 chrXII:426843-427419 3.2e-06 55_[+1]_24 chrXI:513197-513586 3.2e-06 36_[-1]_43 chrX:374212-374778 3.2e-06 24_[-1]_55 chrX:355158-355734 3.2e-06 64_[+1]_15 chrVII:544411-544877 3.2e-06 28_[-1]_51 chrVII:531411-531802 3.2e-06 58_[+1]_21 chrIX:336105-336645 3.2e-06 69_[-1]_10 chrIV:568701-569315 3.2e-06 10_[+1]_69 chrII:405680-406221 3.2e-06 64_[+1]_15 chrIX:438691-439887 3.4e-06 61_[-1]_18 chrIV:1524137-1525664 3.4e-06 7_[-1]_72 chrI:229183-230205 3.4e-06 1_[-1]_78 chrI:1-1137 3.4e-06 28_[+1]_51 chrXIII:808104-808538 4e-06 20_[-1]_59 chrXII:448513-448946 4e-06 16_[-1]_63 chrV:250087-250514 4e-06 40_[+1]_39 chrIV:802585-803008 4e-06 30_[-1]_49 chrIV:520752-521187 4e-06 57_[+1]_22 chrIII:168106-168615 4e-06 36_[-1]_43 chrII:350597-351096 4e-06 35_[+1]_44 chrXIV:631716-632142 7.7e-06 12_[-1]_67 chrXIV:6485-7153 7.7e-06 5_[-1]_74 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BDTGGYYBAGTKGKTWRAGSS MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF BDTGGYYBAGTKGKTWRAGSS width=21 seqs=145 chrXIII:259016-259499 ( 7) CTTGGCCGAGTGGTTAAGGCG 1 chrXII:167745-168266 ( 45) CTTGGCCGAGTGGTTAAGGCG 1 chrX:523845-524349 ( 21) CTTGGCCGAGTGGTTAAGGCG 1 chrVIII:132806-133359 ( 50) CTTGGCCGAGTGGTTAAGGCG 1 chrVII:561477-561952 ( 54) CTTGGCCGAGTGGTTAAGGCG 1 chrIV:1305405-1305903 ( 31) CTTGGCCGAGTGGTTAAGGCG 1 chrIV:980769-981264 ( 64) CTTGGCCGAGTGGTTAAGGCG 1 chrIV:437538-438017 ( 50) CTTGGCCGAGTGGTTAAGGCG 1 chrII:226868-227350 ( 21) CTTGGCCGAGTGGTTAAGGCG 1 chrI:182359-182775 ( 61) CTTGGCCGAGTGGTTAAGGCG 1 chrXIV:602108-602531 ( 48) CTTGGCCCAGTTGGTTAAGGC 1 chrXIV:569696-570162 ( 36) CTTGGCCCAGTTGGTTAAGGC 1 chrXII:1051923-1052382 ( 17) CTTGGCCCAGTTGGTTAAGGC 1 chrVII:738909-739444 ( 1) CTTGGCCCAGTTGGTTAAGGC 1 chrV:443075-443469 ( 28) CTTGGCCCAGTTGGTTAAGGC 1 chrIX:183296-183708 ( 36) CTTGGCCCAGTTGGTTAAGGC 1 chrXVI:689362-689853 ( 13) TATGGCCGAGTGGTTAAGGCG 1 chrV:288227-288733 ( 69) TATGGCCGAGTGGTTAAGGCG 1 chrIII:227761-228216 ( 9) TATGGCCGAGTGGTTAAGGCG 1 chrXII:731911-732308 ( 36) TTTGGCCGAGTGGTTTAAGGC 1 chrX:617702-618205 ( 21) TTTGGCCGAGTGGTTTAAGGC 1 chrVI:191366-191800 ( 55) AGTGGCCGAGTGGTTAAGGCG 1 chrIV:1150704-1151182 ( 23) AGTGGCCGAGTGGTTAAGGCG 1 chrXIV:725972-726418 ( 47) GTTGGCCGAGTGGTCTAAGGC 1 chrXII:962839-963281 ( 20) GTTGGCCGAGTGGTCTAAGGC 1 chrXI:83971-84430 ( 63) GTTGGCCGAGTGGTCTAAGGC 1 chrX:424295-424776 ( 5) GTTGGCCGAGTGGTCTAAGGC 1 chrIV:519565-519910 ( 61) GTTGGCCGAGTGGTCTAAGGC 1 chrII:9372-9841 ( 32) GTTGGCCGAGTGGTCTAAGGC 1 chrXVI:856754-857065 ( 48) TGTGGCGTAGTCGGTAGCGCG 1 chrXV:854023-854438 ( 54) CATGGCGCAGTTGGTAGCGCG 1 chrXII:656758-657197 ( 54) TGTGGCGTAGTCGGTAGCGCG 1 chrXII:214692-215156 ( 56) CATGGCGCAGTTGGTAGCGCG 1 chrX:197158-197608 ( 27) TGTGGCGTAGTCGGTAGCGCG 1 chrVI:204771-205206 ( 33) TGTGGCGTAGTCGGTAGCGCG 1 chrIV:410175-410683 ( 5) TGTGGCGTAGTCGGTAGCGCG 1 chrI:166055-166561 ( 14) CATGGCGCAGTTGGTAGCGCG 1 chrXVI:769026-769493 ( 68) GTTAGCTCAGTTGGTAGAGCG 1 chrXII:875229-875596 ( 19) GTTAGCTCAGTTGGTAGAGCG 1 chrVII:115280-115755 ( 26) GTTAGCTCAGTTGGTAGAGCG 1 chrIV:359348-359796 ( 60) GTTAGCTCAGTTGGTAGAGCG 1 chrXVI:810481-810861 ( 60) CATGGCCAAGTTGGTTAAGGC 1 chrXV:353897-354326 ( 27) TATGGCCAAGTTGGTAAGGCG 1 chrXV:228081-228668 ( 12) CATGGCCAAGTTGGTTAAGGC 1 chrXIV:632416-632875 ( 9) CATGGCCAAGTTGGTTAAGGC 1 chrXIV:102502-102949 ( 46) CATGGCCAAGTTGGTTAAGGC 1 chrVIII:115882-116416 ( 55) TATGGCCAAGTTGGTAAGGCG 1 chrVII:730951-731361 ( 36) CATGGCCAAGTTGGTTAAGGC 1 chrVI:137290-137806 ( 36) CATGGCCAAGTTGGTTAAGGC 1 chrIX:325540-326058 ( 4) TATGGCCAAGTTGGTAAGGCG 1 chrIX:174833-175237 ( 51) TATGGCCAAGTTGGTAAGGCG 1 chrIV:434035-434527 ( 80) TATGGCCAAGTTGGTAAGGCG 1 chrIII:127508-127880 ( 77) CATGGCCAAGTTGGTTAAGGC 1 chrII:266180-266646 ( 20) TATGGCCAAGTTGGTAAGGCG 1 chrXV:663515-664235 ( 35) CGTGGTCTAGTCGGTTATGGC 1 chrXIII:586446-586910 ( 56) CGTGGTCTAGTCGGTTATGGC 1 chrXIII:420348-420873 ( 76) CGTGGTCTAGTCGGTTATGGC 1 chrXIII:372198-372729 ( 80) CGTGGTCTAGTCGGTTATGGC 1 chrXII:687652-688189 ( 37) CGTGGTCTAGTCGGTTATGGC 1 chrXI:379428-379918 ( 62) CGTGGTCTAGTCGGTTATGGC 1 chrXI:307959-308443 ( 41) CGTGGTCTAGTCGGTTATGGC 1 chrX:378128-378568 ( 67) CGTGGTCTAGTCGGTTATGGC 1 chrVIII:85103-85571 ( 59) CGTGGTCTAGTCGGTTATGGC 1 chrVII:823260-823693 ( 61) CGTGGTCTAGTCGGTTATGGC 1 chrVII:412157-412596 ( 16) CGTGGTCTAGTCGGTTATGGC 1 chrV:469117-469760 ( 74) CGTGGTCTAGTCGGTTATGGC 1 chrV:438493-438952 ( 33) CGTGGTCTAGTCGGTTATGGC 1 chrXIV:442768-443243 ( 56) TTTGGCCGAGCGGTCTAAGGC 1 chrXIII:504675-505154 ( 36) TTTGGCCGAGCGGTCTAAGGC 1 chrXII:628151-628622 ( 52) TTTGGCCGAGCGGTCTAAGGC 1 chrVII:422892-423362 ( 20) TTTGGCCGAGCGGTCTAAGGC 1 chrVII:205314-205780 ( 29) TTTGGCCGAGCGGTCTAAGGC 1 chrXIV:374719-375101 ( 14) CTTAGCTCAGTTGGGAGAGCG 1 chrIV:884175-884576 ( 41) TGTAGCTCAGTGGTTAGAGCT 1 chrXVI:622346-622819 ( 74) TTTAGCTCAGTTGGGAGAGCG 1 chrXVI:560039-560487 ( 51) TTTAGCTCAGTTGGGAGAGCG 1 chrXIII:352067-352502 ( 51) TTTAGCTCAGTTGGGAGAGCG 1 chrVIII:358297-358758 ( 67) TTTAGCTCAGTTGGGAGAGCG 1 chrVIII:237752-238130 ( 23) TTTAGCTCAGTTGGGAGAGCG 1 chrVI:157754-158225 ( 43) TTTAGCTCAGTTGGGAGAGCG 1 chrII:36175-36600 ( 66) TTTAGCTCAGTTGGGAGAGCG 1 chrXVI:581834-582302 ( 49) GTTGGCGCAATCGGTAGCGCG 1 chrX:414792-415220 ( 15) GTTGGCGCAATCGGTAGCGCG 1 chrVII:122005-122511 ( 66) GTTGGCGCAATCGGTAGCGCG 1 chrV:435651-436015 ( 16) GTTGGCGCAATCGGTAGCGCG 1 chrIV:1201464-1202033 ( 57) GTTGGCGCAATCGGTAGCGCG 1 chrXV:340146-340575 ( 36) CGTGGCCCAATGGTCACGGCG 1 chrXI:490759-491204 ( 42) CGTGGCCCAATGGTCACGGCG 1 chrX:233663-234184 ( 71) CGTGGCCCAATGGTCACGGCG 1 chrXV:288032-288424 ( 19) GGTAGCCAAGTTGGTTTAAGG 1 chrXIII:837705-838226 ( 18) GGTAGCCAAGTTGGTTTAAGG 1 chrX:542773-543279 ( 43) GGTAGCCAAGTTGGTTTAAGG 1 chrX:354021-354504 ( 37) GGTAGCCAAGTTGGTTTAAGG 1 chrVI:167237-167645 ( 51) GGTAGCCAAGTTGGTTTAAGG 1 chrXVI:860136-860661 ( 36) AGTGGTTTAGTGGTAAAATCC 1 chrXVI:572046-572533 ( 35) AGTGGTTTAGTGGTAAAATCC 1 chrXV:226421-226876 ( 58) AGTGGTTTAGTGGTAAAATCC 1 chrXIII:183787-184188 ( 6) AGTGGTTTAGTGGTAAAATCC 1 chrX:531546-532190 ( 15) AGTGGTTTAGTGGTAAAATCC 1 chrVI:162030-162404 ( 66) AGTGGTTTAGTGGTAAAATCC 1 chrIV:992627-993021 ( 63) AGTGGTTTAGTGGTAAAATCC 1 chrIV:83301-83791 ( 57) AGTGGTTTAGTGGTAAAATCC 1 chrXV:464260-464665 ( 43) TGTGGTCTAGTGGTATGATTC 1 chrXV:300865-301431 ( 4) TGTGGTCTAGTGGTATGATTC 1 chrXIV:567902-568372 ( 33) TGTGGTCTAGTGGTATGATTC 1 chrXIII:195940-196388 ( 31) TGTGGTCTAGTGGTATGATTC 1 chrVIII:388691-389200 ( 75) TGTGGTCTAGTGGTATGATTC 1 chrXV:976185-976666 ( 51) AGTAGCTCAGTAGGAAGAGCG 1 chrXIII:572567-573322 ( 36) AGTAGCTCAGTAGGAAGAGCG 1 chrX:422697-423242 ( 23) AGTAGCTCAGTAGGAAGAGCG 1 chrX:390812-391336 ( 66) AGTAGCTCAGTAGGAAGAGCG 1 chrIV:1175601-1176038 ( 65) AGTAGCTCAGTAGGAAGAGCG 1 chrX:745236-745748 ( 3) GGTAGTGGAGTTGGATATGGG 1 chrIV:1256896-1257300 ( 6) AGTGGTTCAGTGGTTAGAATT 1 chrXV:110844-111268 ( 2) GTTAGTGTAGTGGTTATCATC 1 chrXIV:96041-96632 ( 1) GTTAGTGTAGTGGTTATCATC 1 chrXII:489304-489583 ( 3) TGTAGTTAAGCTGGTAAGAGC 1 chrXII:468762-468976 ( 41) TGTAGTTAAGCTGGTAAGAGC 1 chrVII:779420-779874 ( 24) GTTAGTGTAGTGGTTATCATC 1 chrXI:0-1064 ( 72) CTTGCCTCAGCGGTTTATACC 1 chrVII:73740-74117 ( 66) CATAGTTTAGTTGTAAAATTG 1 chrXIII:463268-463868 ( 41) GATAGTTTAATGGTCAGAATG 1 chrXII:793693-794097 ( 78) GATAGTTTAATGGTCAGAATG 1 chrXII:426843-427419 ( 56) GATAGTTTAATGGTCAGAATG 1 chrXI:513197-513586 ( 37) GATAGTTTAATGGTCAGAATG 1 chrX:374212-374778 ( 25) GATAGTTTAATGGTCAGAATG 1 chrX:355158-355734 ( 65) GATAGTTTAATGGTCAGAATG 1 chrVII:544411-544877 ( 29) GATAGTTTAATGGTCAGAATG 1 chrVII:531411-531802 ( 59) GATAGTTTAATGGTCAGAATG 1 chrIX:336105-336645 ( 70) GATAGTTTAATGGTCAGAATG 1 chrIV:568701-569315 ( 11) GATAGTTTAATGGTCAGAATG 1 chrII:405680-406221 ( 65) GATAGTTTAATGGTCAGAATG 1 chrIX:438691-439887 ( 62) CTTGCCTCAGCGGTCTATACC 1 chrIV:1524137-1525664 ( 8) CTTGCCTCAGCGGTCTATACC 1 chrI:229183-230205 ( 2) CTTGCCTCAGCGGTCTATACC 1 chrI:1-1137 ( 29) CTTGCCTCAGCGGTCTATACC 1 chrXIII:808104-808538 ( 21) TATAGTGTAGTGGTTATCACT 1 chrXII:448513-448946 ( 17) TATAGTGTAGTGGTTATCACT 1 chrV:250087-250514 ( 41) TATAGTGTAGTGGTTATCACT 1 chrIV:802585-803008 ( 31) TATAGTGTAGTGGTTATCACT 1 chrIV:520752-521187 ( 58) TATAGTGTAGTGGTTATCACT 1 chrIII:168106-168615 ( 37) TATAGTGTAGTGGTTATCACT 1 chrII:350597-351096 ( 36) TATAGTGTAGTGGTTATCACT 1 chrXIV:631716-632142 ( 13) TGTGGTCTAGAGGTATGATTC 1 chrXIV:6485-7153 ( 6) TATGGTTGAGTGGGGCAGGGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BDTGGYYBAGTKGKTWRAGSS MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 42320 bayes= 9.04079 E= 1.2e-384 -147 80 31 2 -19 -1382 88 28 -1382 -1382 -1382 171 11 -1382 178 -1382 -1382 -249 231 -1382 -1382 169 -1382 28 -1382 139 -23 8 -115 54 9 28 171 -1382 -1382 -1382 -122 -1382 216 -1382 -547 -123 -1382 157 -315 -29 139 -4 -1382 -1382 236 -1382 -1382 -1382 133 74 -108 4 -165 96 99 -481 -1382 34 81 -323 80 -156 78 -29 -6 -122 -38 -1382 177 -156 -1382 141 77 -101 -1382 116 135 -215 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BDTGGYYBAGTKGKTWRAGSS MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 145 E= 1.2e-384 0.110345 0.337931 0.241379 0.310345 0.268966 0.000000 0.358621 0.372414 0.000000 0.000000 0.000000 1.000000 0.331034 0.000000 0.668966 0.000000 0.000000 0.034483 0.965517 0.000000 0.000000 0.627586 0.000000 0.372414 0.000000 0.510345 0.165517 0.324138 0.137931 0.282759 0.206897 0.372414 1.000000 0.000000 0.000000 0.000000 0.131034 0.000000 0.868966 0.000000 0.006897 0.082759 0.000000 0.910345 0.034483 0.158621 0.510345 0.296552 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.489655 0.510345 0.144828 0.200000 0.062069 0.593103 0.606897 0.006897 0.000000 0.386207 0.537931 0.020690 0.337931 0.103448 0.524138 0.158621 0.186207 0.131034 0.234483 0.000000 0.662069 0.103448 0.000000 0.517241 0.331034 0.151724 0.000000 0.434483 0.496552 0.068966 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BDTGGYYBAGTKGKTWRAGSS MEME-1 regular expression -------------------------------------------------------------------------------- [CTG][TGA]T[GA]G[CT][CT][TCG]AGT[GT]G[TG][TC][AT][AG]A[GA][CG][GC] -------------------------------------------------------------------------------- Time 270.48 secs. ******************************************************************************** ******************************************************************************** MOTIF RAGRTCVBSGGTTCGATYCCS MEME-2 width = 21 sites = 114 llr = 1778 E-value = 4.6e-337 ******************************************************************************** -------------------------------------------------------------------------------- Motif RAGRTCVBSGGTTCGATYCCS MEME-2 Description -------------------------------------------------------------------------------- Simplified A 46242:3:12::::3a2:::: pos.-specific C 112118443::::a::24a75 probability G 43651:3257a:::7:2:::3 matrix T 1:::62:31::aa:::46:31 bits 2.4 * * * 2.1 * * * 1.9 * * * 1.7 **** * * Relative 1.4 * ****** * Entropy 1.2 * ******* * (22.5 bits) 0.9 * ******* *** 0.7 ** * ******* **** 0.5 **** *********** **** 0.2 **************** **** 0.0 --------------------- Multilevel GAGGTCCCGGGTTCGATTCCC consensus AGCA TATCA A CC TG sequence GG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCVBSGGTTCGATYCCS MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrIII:123388-123786 - 50 2.84e-13 TAGGGTGCGG GAGGTCCCGGGTTCGAGTCCC GGCTCGCCCC chrXV:854023-854438 - 17 9.48e-11 TTGCAAGGAA GAGGTCATCGGTTCGATTCCG GTTGCGTCCA chrXII:214692-215156 - 19 9.48e-11 TTGCAAGGAA GAGGTCATCGGTTCGATTCCG GTTGCGTCCA chrV:311741-312291 - 67 9.48e-11 TTGCAAGGAA GAGGTCATCGGTTCGATTCCG GTTGCGTCCA chrI:166055-166561 + 51 9.48e-11 TTGCAAGGAA GAGGTCATCGGTTCGATTCCG GTTGCGTCCA chrXV:980489-981046 + 40 3.69e-10 AAGCATGCGA GAGGCCCTGGGTTCAATTCCC AGCTCGCCCC chrXV:300865-301431 + 70 3.69e-10 AAGCATGCGA GAGGCCCTGGGTTCAATTCCC AGCTCGCCCC chrXIV:546953-547413 + 33 3.69e-10 AAGCATGCGA GAGGCCCTGGGTTCAATTCCC AGCTCGCCCC chrVIII:388691-389200 - 8 3.69e-10 AAGCATGCGA GAGGCCCTGGGTTCAATTCCC AGCTCGC chrVII:738909-739444 + 39 4.42e-10 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGACCA chrV:551010-551569 - 56 4.42e-10 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGACCA chrIV:667763-668247 - 62 4.42e-10 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGACCA chrII:197266-197870 + 19 4.42e-10 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGACCA chrVII:779420-779874 + 60 5.27e-10 CTTCCAAGGT GGGGACACGGGTTCGATTCTC GTACCGCTCA chrXIII:480409-480864 - 45 7.40e-10 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrXI:202825-203292 + 33 7.40e-10 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrX:414792-415220 + 52 7.40e-10 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrX:115704-116213 - 41 7.40e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTATCGGAG chrVII:541623-542159 + 50 7.40e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTATCGGAG chrVII:401397-401771 - 3 7.40e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CG chrVI:226429-226919 - 74 7.40e-10 AATCAT AAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrV:487051-487626 - 53 7.40e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTATCGGAG chrV:176903-177402 + 38 7.40e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTATCGGAG chrIX:299971-300481 - 62 7.40e-10 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrIV:1016964-1017503 - 34 7.40e-10 TTCTCACCGT GGAGACCGGGGTTCGACTCCC CGCTTCGGAG chrXIII:320961-321326 - 64 8.76e-10 TAGCATGGGA GAGGTCTCCGGTTCGATTCCG GACTCGTCCA chrXII:656758-657197 - 17 8.76e-10 TAGCATGGGA GAGGTCTCCGGTTCGATTCCG GACTCGTCCA chrVII:774149-774661 + 36 8.76e-10 TAGCATGGGA GAGGTCTCCGGTTCGATTCCG GACTCGTCCA chrIV:410175-410683 + 42 8.76e-10 TAGCATGGGA GAGGTCTCCGGTTCGATTCCG GACTCGTCCA chrXVI:860136-860661 + 71 1.42e-09 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGCTTGCGC chrXVI:572046-572533 + 70 1.42e-09 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrXV:226421-226876 - 23 1.42e-09 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrX:531546-532190 + 50 1.42e-09 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrX:396441-396975 - 78 1.42e-09 GT TGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrVII:845364-846091 + 12 1.42e-09 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrXIII:747636-748141 - 64 3.48e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrXIII:131601-132091 - 39 3.48e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrXI:162326-162728 - 20 3.48e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrX:374212-374778 - 71 3.48e-09 TCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrX:355158-355734 + 19 3.48e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrVII:736183-736543 + 68 3.48e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrVII:405274-405750 + 49 3.48e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrV:250087-250514 + 77 3.48e-09 TTTTGATCCG GACAACCCCGGTTCGAATCCG GGT chrIII:168106-168615 - 1 3.48e-09 TTTTGATCCG GACAACCCCGGTTCGAATCCG chrII:405680-406221 + 19 3.48e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrII:350597-351096 + 72 3.48e-09 TTTTGATCCG GACAACCCCGGTTCGAATCCG GGTAAGAC chrX:538367-538899 + 13 4.01e-09 TCCTAAGGAG AAGACTGCGGGTTCGAGTCCC GTACGGAACG chrIV:488429-489135 - 75 5.28e-09 CGGCG AAGATCCCGAGTTCGAACCTC GGTTGGATCA chrII:326525-327066 - 57 5.28e-09 TTACACGGCG AAGATCCCGAGTTCGAACCTC GGTTGGATCA chrXVI:769026-769493 - 8 6.05e-09 AGGATACCGA AATGTCAGGGGTTCGAGCCCC CTATGAG chrXV:438457-439024 + 18 6.05e-09 AGGATACCGA AATGTCAGGGGTTCGAGCCCC CTATGAGGAG chrXII:875229-875596 + 79 6.05e-09 AGGATACCGA AATGTCAGGGGTTCGAGCCCC C chrXI:578748-579384 + 14 6.05e-09 AGGATACCGA AATGTCAGGGGTTCGAGCCCC CTATGAGGAG chrV:130809-131382 - 47 6.05e-09 TTTTGATCCG AACAACCCCGGTTCGAATCCG GGTAAGACCT chrXIII:586446-586910 - 18 8.95e-09 TAACACGCAG AACGTCCCCAGTTCGATCCTG GGCGAAATCA chrXIII:420348-420873 - 38 8.95e-09 TAACACGCAG AACGTCCCCAGTTCGATCCTG GGCGAAATCA chrXIII:372198-372729 - 42 8.95e-09 TAACACGCAG AACGTCCCCAGTTCGATCCTG GGCGAAATCA chrXI:307959-308443 - 3 8.95e-09 TAACACGCAG AACGTCCCCAGTTCGATCCTG GG chrVIII:85103-85571 - 21 8.95e-09 TAACACGCAG AACGTCCCCAGTTCGATCCTG GGCGAAATCA chrV:438493-438952 + 71 8.95e-09 TAACACGCAG AACGTCCCCAGTTCGATCCTG GGCGAAATC chrVIII:115882-116416 - 18 1.02e-08 TAGTAATGTG GAGATCATCGGTTCAAATCCG ATTGGAAGCA chrIX:325540-326058 + 41 1.02e-08 TAGTAATGTG GAGATCATCGGTTCAAATCCG ATTGGAAGCA chrIV:434035-434527 - 43 1.02e-08 TAGTAATGTG GAGATCATCGGTTCAAATCCG ATTGGAAGCA chrII:266180-266646 + 57 1.02e-08 TAGTAATGTG GAGATCATCGGTTCAAATCCG ATTGGAAGCA chrXV:487271-487728 + 33 5.61e-08 TGTTAATCGC AAGATCGTGAGTTCAACCCTC ACTGGGGTCG chrXV:228081-228668 + 50 5.61e-08 TGTTAATCGC AAGATCGTGAGTTCAACCCTC ACTGGGGTCG chrXIV:632416-632875 + 47 5.61e-08 TGTTAATCGC AAGATCGTGAGTTCAACCCTC ACTGGGGTCG chrXII:975733-976208 - 73 5.61e-08 TAATCGC AAGATCGTGAGTTCAACCCTC ACTGGGGTCG chrXI:74400-75022 + 6 5.61e-08 ATCGC AAGATCGTGAGTTCAACCCTC ACTGGGGTCG chrVII:730951-731361 + 74 5.61e-08 TGTTAATCGC AAGATCGTGAGTTCAACCCTC ACTGGG chrX:422697-423242 + 60 6.21e-08 TCATAATCTG AAGGTCGAGAGTTCGAACCTC CCCTGGAGCA chrX:390812-391336 - 29 6.21e-08 TCATAATCTG AAGGTCGAGAGTTCGAACCTC CCCTGGAGCA chrXVI:55850-56496 - 56 7.59e-08 TTGCAATCGA AGGGTTGCAGGTTCAATTCCT GTCCGTTTCA chrXIII:378996-379610 - 60 7.59e-08 TTGCAATCGA AGGGTTGCAGGTTCAATTCCT GTCCGTTTCA chrX:415702-416266 - 7 7.59e-08 TTGCAATCGA AGGGTTGCAGGTTCAATTCCT GTCCGT chrVII:287047-287754 - 10 7.59e-08 TTGCAATCGA AGGGTTGCAGGTTCAATTCCT GTCCGTTTC chrXVI:622346-622819 - 18 1.11e-07 AAGTTATCTG GAGGTCCTGTGTTCGATCCAC AGAATTCGCA chrXIV:374719-375101 + 69 1.11e-07 AAGTCATCTG GAGGTCCTGTGTTCGATCCAC AGAGTTCGCA chrVIII:358297-358758 - 11 1.11e-07 AAGTTATCTG GAGGTCCTGTGTTCGATCCAC AGAATTCGCA chrXV:288032-288424 + 72 1.22e-07 ACGAAATCTT GAGATCGGGCGTTCGACTCGC CCCCGGGA chrXIII:837705-838226 + 71 1.22e-07 ACGAAATCTT GAGATCGGGCGTTCGACTCGC CCCCGGGAG chrXII:374207-374663 + 12 1.22e-07 TACGAACCAG AAGATTCCAGGTTCAAGTCCT GGCGGGGAAG chrXI:490759-491204 + 79 1.22e-07 TACGAACCAG AAGATTCCAGGTTCAAGTCCT G chrIV:946137-946608 + 48 1.22e-07 ACGAAATCTT GAGATCGGGCGTTCGACTCGC CCCCGGGAGA chrXVI:744053-744587 + 55 1.75e-07 TTGTAATGCA AAGGTCGTTAGTTCAATTCTG ACAGGTGGCA chrVIII:132806-133359 - 4 1.91e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT GCA chrVII:561477-561952 - 8 1.91e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT GCAGTTG chrV:86448-86932 + 15 1.91e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT GCAGTTGTCG chrIV:1305405-1305903 + 78 1.91e-07 TTGGGCTTTG GCCCGCGCAGGTTCGAGTCCT GC chrIV:980769-981264 - 18 1.91e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT GCAGTTGTCG chrII:226868-227350 + 67 1.91e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT GCAGTTGTCG chrI:182359-182775 - 15 1.91e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT GCAGTTGTCG chrXIII:463268-463868 + 77 2.26e-07 TTGTCGCGTG CCAGATCGGGGTTCAATTCCC CGT chrXI:513197-513586 - 1 2.26e-07 TTGTCGCGTG CCAGATCGGGGTTCAATTCCC chrX:541330-541814 + 27 2.26e-07 TTGTCGCGTG CCAGATCGGGGTTCAATTCCC CGTCGCGGAG chrX:204531-205063 + 29 2.26e-07 TTGTCGCGTG CCAGATCGGGGTTCAATTCCC CGTCGCGGAG chrIX:336105-336645 - 34 2.26e-07 TTGTCGCGTG CCAGATCGGGGTTCAATTCCC CGTCGCGGAG chrIV:568701-569315 + 47 2.26e-07 TTGTCGCGTG CCAGATCGGGGTTCAATTCCC CGTCGCGGAG chrXVI:689362-689853 + 59 8.14e-07 GTTGGGCTCT GCCCGCGCTGGTTCAAATCCT GCTGGTGTCG chrV:288227-288733 - 23 8.14e-07 GTTGGGCTCT GCCCGCGCTGGTTCAAATCCT GCTGGTGTCG chrIII:227761-228216 + 74 8.14e-07 CTTGGGCTCT GCCCGCGCTGGTTCAAATCCT GCTGGT chrII:9372-9841 + 80 8.14e-07 TTGGACGGTT GTCCGCGCGAGTTCGAACCTC chrXVI:435654-436185 - 34 8.70e-07 TGCAAATCTG TTGGTCCTTAGTTCGATCCTG AGTGCGAGCT chrVII:706919-707343 - 37 8.70e-07 TGCAAATCTG TTGGTCCTTAGTTCGATCCTG AGTGCGAGCT chrXV:274476-275007 + 52 9.92e-07 ATTGGGTTTT ACCTGCGCAGGTTCGAATCCT GTCTGTGACG chrXIII:362868-363299 + 72 1.62e-06 TTGTGGCCGA TGAAACCCTGGTTCGATTCTA GGAGATGG chrXI:313188-313660 - 37 1.62e-06 TTGTGGCCGA TGAAACCCTGGTTCGATTCTA GGAGATGGCA chrVII:319597-320146 + 1 1.62e-06 . TGAAACCCTGGTTCGATTCTA GGAGATGGCA chrVII:110436-110932 - 1 1.62e-06 TTGTGGCCGA TGAAACCCTGGTTCGATTCTA chrV:434392-434770 - 20 1.62e-06 TTGTGGCCGA TGAAACCCTGGTTCGATTCTA GGAGATGGCA chrXIII:91618-92390 - 74 3.36e-06 TAAAGC CTCACCCCGAGTTCGAACCGG AAAAAAAAAT chrXI:458369-458871 + 70 3.85e-06 AGGTATCGTA AGATGCAAGAGTTCGAATCTC TTAGCAACCA chrIV:1461488-1462046 - 8 3.85e-06 AGGTATCGTA AGATGCAAGAGTTCGAATCTC TTAGCAA chrI:180945-181508 + 48 3.85e-06 AGGTATCGTA AGATGCAAGAGTTCGAATCTC TTAGCAACCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCVBSGGTTCGATYCCS MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:123388-123786 2.8e-13 49_[-2]_30 chrXV:854023-854438 9.5e-11 16_[-2]_63 chrXII:214692-215156 9.5e-11 18_[-2]_61 chrV:311741-312291 9.5e-11 66_[-2]_13 chrI:166055-166561 9.5e-11 50_[+2]_29 chrXV:980489-981046 3.7e-10 39_[+2]_40 chrXV:300865-301431 3.7e-10 69_[+2]_10 chrXIV:546953-547413 3.7e-10 32_[+2]_47 chrVIII:388691-389200 3.7e-10 7_[-2]_72 chrVII:738909-739444 4.4e-10 38_[+2]_41 chrV:551010-551569 4.4e-10 55_[-2]_24 chrIV:667763-668247 4.4e-10 61_[-2]_18 chrII:197266-197870 4.4e-10 18_[+2]_61 chrVII:779420-779874 5.3e-10 59_[+2]_20 chrXIII:480409-480864 7.4e-10 44_[-2]_35 chrXI:202825-203292 7.4e-10 32_[+2]_47 chrX:414792-415220 7.4e-10 51_[+2]_28 chrX:115704-116213 7.4e-10 40_[-2]_39 chrVII:541623-542159 7.4e-10 49_[+2]_30 chrVII:401397-401771 7.4e-10 2_[-2]_77 chrVI:226429-226919 7.4e-10 73_[-2]_6 chrV:487051-487626 7.4e-10 52_[-2]_27 chrV:176903-177402 7.4e-10 37_[+2]_42 chrIX:299971-300481 7.4e-10 61_[-2]_18 chrIV:1016964-1017503 7.4e-10 33_[-2]_46 chrXIII:320961-321326 8.8e-10 63_[-2]_16 chrXII:656758-657197 8.8e-10 16_[-2]_63 chrVII:774149-774661 8.8e-10 35_[+2]_44 chrIV:410175-410683 8.8e-10 41_[+2]_38 chrXVI:860136-860661 1.4e-09 70_[+2]_9 chrXVI:572046-572533 1.4e-09 69_[+2]_10 chrXV:226421-226876 1.4e-09 22_[-2]_57 chrX:531546-532190 1.4e-09 49_[+2]_30 chrX:396441-396975 1.4e-09 77_[-2]_2 chrVII:845364-846091 1.4e-09 11_[+2]_68 chrXIII:747636-748141 3.5e-09 63_[-2]_16 chrXIII:131601-132091 3.5e-09 38_[-2]_41 chrXI:162326-162728 3.5e-09 19_[-2]_60 chrX:374212-374778 3.5e-09 70_[-2]_9 chrX:355158-355734 3.5e-09 18_[+2]_61 chrVII:736183-736543 3.5e-09 67_[+2]_12 chrVII:405274-405750 3.5e-09 48_[+2]_31 chrV:250087-250514 3.5e-09 76_[+2]_3 chrIII:168106-168615 3.5e-09 [-2]_79 chrII:405680-406221 3.5e-09 18_[+2]_61 chrII:350597-351096 3.5e-09 71_[+2]_8 chrX:538367-538899 4e-09 12_[+2]_67 chrIV:488429-489135 5.3e-09 74_[-2]_5 chrII:326525-327066 5.3e-09 56_[-2]_23 chrXVI:769026-769493 6e-09 7_[-2]_72 chrXV:438457-439024 6e-09 17_[+2]_62 chrXII:875229-875596 6e-09 78_[+2]_1 chrXI:578748-579384 6e-09 13_[+2]_66 chrV:130809-131382 6e-09 46_[-2]_33 chrXIII:586446-586910 9e-09 17_[-2]_62 chrXIII:420348-420873 9e-09 37_[-2]_42 chrXIII:372198-372729 9e-09 41_[-2]_38 chrXI:307959-308443 9e-09 2_[-2]_77 chrVIII:85103-85571 9e-09 20_[-2]_59 chrV:438493-438952 9e-09 70_[+2]_9 chrVIII:115882-116416 1e-08 17_[-2]_62 chrIX:325540-326058 1e-08 40_[+2]_39 chrIV:434035-434527 1e-08 42_[-2]_37 chrII:266180-266646 1e-08 56_[+2]_23 chrXV:487271-487728 5.6e-08 32_[+2]_47 chrXV:228081-228668 5.6e-08 49_[+2]_30 chrXIV:632416-632875 5.6e-08 46_[+2]_33 chrXII:975733-976208 5.6e-08 72_[-2]_7 chrXI:74400-75022 5.6e-08 5_[+2]_74 chrVII:730951-731361 5.6e-08 73_[+2]_6 chrX:422697-423242 6.2e-08 59_[+2]_20 chrX:390812-391336 6.2e-08 28_[-2]_51 chrXVI:55850-56496 7.6e-08 55_[-2]_24 chrXIII:378996-379610 7.6e-08 59_[-2]_20 chrX:415702-416266 7.6e-08 6_[-2]_73 chrVII:287047-287754 7.6e-08 9_[-2]_70 chrXVI:622346-622819 1.1e-07 17_[-2]_62 chrXIV:374719-375101 1.1e-07 68_[+2]_11 chrVIII:358297-358758 1.1e-07 10_[-2]_69 chrXV:288032-288424 1.2e-07 71_[+2]_8 chrXIII:837705-838226 1.2e-07 70_[+2]_9 chrXII:374207-374663 1.2e-07 11_[+2]_68 chrXI:490759-491204 1.2e-07 78_[+2]_1 chrIV:946137-946608 1.2e-07 47_[+2]_32 chrXVI:744053-744587 1.8e-07 54_[+2]_25 chrVIII:132806-133359 1.9e-07 3_[-2]_76 chrVII:561477-561952 1.9e-07 7_[-2]_72 chrV:86448-86932 1.9e-07 14_[+2]_65 chrIV:1305405-1305903 1.9e-07 77_[+2]_2 chrIV:980769-981264 1.9e-07 17_[-2]_62 chrII:226868-227350 1.9e-07 66_[+2]_13 chrI:182359-182775 1.9e-07 14_[-2]_65 chrXIII:463268-463868 2.3e-07 76_[+2]_3 chrXI:513197-513586 2.3e-07 [-2]_79 chrX:541330-541814 2.3e-07 26_[+2]_53 chrX:204531-205063 2.3e-07 28_[+2]_51 chrIX:336105-336645 2.3e-07 33_[-2]_46 chrIV:568701-569315 2.3e-07 46_[+2]_33 chrXVI:689362-689853 8.1e-07 58_[+2]_21 chrV:288227-288733 8.1e-07 22_[-2]_57 chrIII:227761-228216 8.1e-07 73_[+2]_6 chrII:9372-9841 8.1e-07 79_[+2] chrXVI:435654-436185 8.7e-07 33_[-2]_46 chrVII:706919-707343 8.7e-07 36_[-2]_43 chrXV:274476-275007 9.9e-07 51_[+2]_28 chrXIII:362868-363299 1.6e-06 71_[+2]_8 chrXI:313188-313660 1.6e-06 36_[-2]_43 chrVII:319597-320146 1.6e-06 [+2]_79 chrVII:110436-110932 1.6e-06 [-2]_79 chrV:434392-434770 1.6e-06 19_[-2]_60 chrXIII:91618-92390 3.4e-06 73_[-2]_6 chrXI:458369-458871 3.9e-06 69_[+2]_10 chrIV:1461488-1462046 3.9e-06 7_[-2]_72 chrI:180945-181508 3.9e-06 47_[+2]_32 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCVBSGGTTCGATYCCS MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RAGRTCVBSGGTTCGATYCCS width=21 seqs=114 chrIII:123388-123786 ( 50) GAGGTCCCGGGTTCGAGTCCC 1 chrXV:854023-854438 ( 17) GAGGTCATCGGTTCGATTCCG 1 chrXII:214692-215156 ( 19) GAGGTCATCGGTTCGATTCCG 1 chrV:311741-312291 ( 67) GAGGTCATCGGTTCGATTCCG 1 chrI:166055-166561 ( 51) GAGGTCATCGGTTCGATTCCG 1 chrXV:980489-981046 ( 40) GAGGCCCTGGGTTCAATTCCC 1 chrXV:300865-301431 ( 70) GAGGCCCTGGGTTCAATTCCC 1 chrXIV:546953-547413 ( 33) GAGGCCCTGGGTTCAATTCCC 1 chrVIII:388691-389200 ( 8) GAGGCCCTGGGTTCAATTCCC 1 chrVII:738909-739444 ( 39) GGGATCAGCGGTTCGATCCCG 1 chrV:551010-551569 ( 56) GGGATCAGCGGTTCGATCCCG 1 chrIV:667763-668247 ( 62) GGGATCAGCGGTTCGATCCCG 1 chrII:197266-197870 ( 19) GGGATCAGCGGTTCGATCCCG 1 chrVII:779420-779874 ( 60) GGGGACACGGGTTCGATTCTC 1 chrXIII:480409-480864 ( 45) AAGGTTAGGGGTTCGAGCCCC 1 chrXI:202825-203292 ( 33) AAGGTTAGGGGTTCGAGCCCC 1 chrX:414792-415220 ( 52) AAGGTTAGGGGTTCGAGCCCC 1 chrX:115704-116213 ( 41) GGAGACCGGGGTTCGACTCCC 1 chrVII:541623-542159 ( 50) GGAGACCGGGGTTCGACTCCC 1 chrVII:401397-401771 ( 3) GGAGACCGGGGTTCGACTCCC 1 chrVI:226429-226919 ( 74) AAGGTTAGGGGTTCGAGCCCC 1 chrV:487051-487626 ( 53) GGAGACCGGGGTTCGACTCCC 1 chrV:176903-177402 ( 38) GGAGACCGGGGTTCGACTCCC 1 chrIX:299971-300481 ( 62) AAGGTTAGGGGTTCGAGCCCC 1 chrIV:1016964-1017503 ( 34) GGAGACCGGGGTTCGACTCCC 1 chrXIII:320961-321326 ( 64) GAGGTCTCCGGTTCGATTCCG 1 chrXII:656758-657197 ( 17) GAGGTCTCCGGTTCGATTCCG 1 chrVII:774149-774661 ( 36) GAGGTCTCCGGTTCGATTCCG 1 chrIV:410175-410683 ( 42) GAGGTCTCCGGTTCGATTCCG 1 chrXVI:860136-860661 ( 71) TGGGCCCCCGGTTCGATTCCG 1 chrXVI:572046-572533 ( 70) TGGGCCCCCGGTTCGATTCCG 1 chrXV:226421-226876 ( 23) TGGGCCCCCGGTTCGATTCCG 1 chrX:531546-532190 ( 50) TGGGCCCCCGGTTCGATTCCG 1 chrX:396441-396975 ( 78) TGGGCCCCCGGTTCGATTCCG 1 chrVII:845364-846091 ( 12) TGGGCCCCCGGTTCGATTCCG 1 chrXIII:747636-748141 ( 64) AAGATTATGGGTTCGACCCCC 1 chrXIII:131601-132091 ( 39) AAGATTATGGGTTCGACCCCC 1 chrXI:162326-162728 ( 20) AAGATTATGGGTTCGACCCCC 1 chrX:374212-374778 ( 71) AAGATTATGGGTTCGACCCCC 1 chrX:355158-355734 ( 19) AAGATTATGGGTTCGACCCCC 1 chrVII:736183-736543 ( 68) AAGATTATGGGTTCGACCCCC 1 chrVII:405274-405750 ( 49) AAGATTATGGGTTCGACCCCC 1 chrV:250087-250514 ( 77) GACAACCCCGGTTCGAATCCG 1 chrIII:168106-168615 ( 1) GACAACCCCGGTTCGAATCCG 1 chrII:405680-406221 ( 19) AAGATTATGGGTTCGACCCCC 1 chrII:350597-351096 ( 72) GACAACCCCGGTTCGAATCCG 1 chrX:538367-538899 ( 13) AAGACTGCGGGTTCGAGTCCC 1 chrIV:488429-489135 ( 75) AAGATCCCGAGTTCGAACCTC 1 chrII:326525-327066 ( 57) AAGATCCCGAGTTCGAACCTC 1 chrXVI:769026-769493 ( 8) AATGTCAGGGGTTCGAGCCCC 1 chrXV:438457-439024 ( 18) AATGTCAGGGGTTCGAGCCCC 1 chrXII:875229-875596 ( 79) AATGTCAGGGGTTCGAGCCCC 1 chrXI:578748-579384 ( 14) AATGTCAGGGGTTCGAGCCCC 1 chrV:130809-131382 ( 47) AACAACCCCGGTTCGAATCCG 1 chrXIII:586446-586910 ( 18) AACGTCCCCAGTTCGATCCTG 1 chrXIII:420348-420873 ( 38) AACGTCCCCAGTTCGATCCTG 1 chrXIII:372198-372729 ( 42) AACGTCCCCAGTTCGATCCTG 1 chrXI:307959-308443 ( 3) AACGTCCCCAGTTCGATCCTG 1 chrVIII:85103-85571 ( 21) AACGTCCCCAGTTCGATCCTG 1 chrV:438493-438952 ( 71) AACGTCCCCAGTTCGATCCTG 1 chrVIII:115882-116416 ( 18) GAGATCATCGGTTCAAATCCG 1 chrIX:325540-326058 ( 41) GAGATCATCGGTTCAAATCCG 1 chrIV:434035-434527 ( 43) GAGATCATCGGTTCAAATCCG 1 chrII:266180-266646 ( 57) GAGATCATCGGTTCAAATCCG 1 chrXV:487271-487728 ( 33) AAGATCGTGAGTTCAACCCTC 1 chrXV:228081-228668 ( 50) AAGATCGTGAGTTCAACCCTC 1 chrXIV:632416-632875 ( 47) AAGATCGTGAGTTCAACCCTC 1 chrXII:975733-976208 ( 73) AAGATCGTGAGTTCAACCCTC 1 chrXI:74400-75022 ( 6) AAGATCGTGAGTTCAACCCTC 1 chrVII:730951-731361 ( 74) AAGATCGTGAGTTCAACCCTC 1 chrX:422697-423242 ( 60) AAGGTCGAGAGTTCGAACCTC 1 chrX:390812-391336 ( 29) AAGGTCGAGAGTTCGAACCTC 1 chrXVI:55850-56496 ( 56) AGGGTTGCAGGTTCAATTCCT 1 chrXIII:378996-379610 ( 60) AGGGTTGCAGGTTCAATTCCT 1 chrX:415702-416266 ( 7) AGGGTTGCAGGTTCAATTCCT 1 chrVII:287047-287754 ( 10) AGGGTTGCAGGTTCAATTCCT 1 chrXVI:622346-622819 ( 18) GAGGTCCTGTGTTCGATCCAC 1 chrXIV:374719-375101 ( 69) GAGGTCCTGTGTTCGATCCAC 1 chrVIII:358297-358758 ( 11) GAGGTCCTGTGTTCGATCCAC 1 chrXV:288032-288424 ( 72) GAGATCGGGCGTTCGACTCGC 1 chrXIII:837705-838226 ( 71) GAGATCGGGCGTTCGACTCGC 1 chrXII:374207-374663 ( 12) AAGATTCCAGGTTCAAGTCCT 1 chrXI:490759-491204 ( 79) AAGATTCCAGGTTCAAGTCCT 1 chrIV:946137-946608 ( 48) GAGATCGGGCGTTCGACTCGC 1 chrXVI:744053-744587 ( 55) AAGGTCGTTAGTTCAATTCTG 1 chrVIII:132806-133359 ( 4) GCCCGCGCAGGTTCGAGTCCT 1 chrVII:561477-561952 ( 8) GCCCGCGCAGGTTCGAGTCCT 1 chrV:86448-86932 ( 15) GCCCGCGCAGGTTCGAGTCCT 1 chrIV:1305405-1305903 ( 78) GCCCGCGCAGGTTCGAGTCCT 1 chrIV:980769-981264 ( 18) GCCCGCGCAGGTTCGAGTCCT 1 chrII:226868-227350 ( 67) GCCCGCGCAGGTTCGAGTCCT 1 chrI:182359-182775 ( 15) GCCCGCGCAGGTTCGAGTCCT 1 chrXIII:463268-463868 ( 77) CCAGATCGGGGTTCAATTCCC 1 chrXI:513197-513586 ( 1) CCAGATCGGGGTTCAATTCCC 1 chrX:541330-541814 ( 27) CCAGATCGGGGTTCAATTCCC 1 chrX:204531-205063 ( 29) CCAGATCGGGGTTCAATTCCC 1 chrIX:336105-336645 ( 34) CCAGATCGGGGTTCAATTCCC 1 chrIV:568701-569315 ( 47) CCAGATCGGGGTTCAATTCCC 1 chrXVI:689362-689853 ( 59) GCCCGCGCTGGTTCAAATCCT 1 chrV:288227-288733 ( 23) GCCCGCGCTGGTTCAAATCCT 1 chrIII:227761-228216 ( 74) GCCCGCGCTGGTTCAAATCCT 1 chrII:9372-9841 ( 80) GTCCGCGCGAGTTCGAACCTC 1 chrXVI:435654-436185 ( 34) TTGGTCCTTAGTTCGATCCTG 1 chrVII:706919-707343 ( 37) TTGGTCCTTAGTTCGATCCTG 1 chrXV:274476-275007 ( 52) ACCTGCGCAGGTTCGAATCCT 1 chrXIII:362868-363299 ( 72) TGAAACCCTGGTTCGATTCTA 1 chrXI:313188-313660 ( 37) TGAAACCCTGGTTCGATTCTA 1 chrVII:319597-320146 ( 1) TGAAACCCTGGTTCGATTCTA 1 chrVII:110436-110932 ( 1) TGAAACCCTGGTTCGATTCTA 1 chrV:434392-434770 ( 20) TGAAACCCTGGTTCGATTCTA 1 chrXIII:91618-92390 ( 74) CTCACCCCGAGTTCGAACCGG 1 chrXI:458369-458871 ( 70) AGATGCAAGAGTTCGAATCTC 1 chrIV:1461488-1462046 ( 8) AGATGCAAGAGTTCGAATCTC 1 chrI:180945-181508 ( 48) AGATGCAAGAGTTCGAATCTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCVBSGGTTCGATYCCS MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 42320 bayes= 9.77047 E= 4.6e-337 40 -166 112 -142 88 -38 39 -312 -80 6 160 -312 20 -101 141 -312 -66 -88 -56 90 -1348 199 -1348 -42 -8 112 39 -312 -280 115 34 -12 -132 53 136 -166 -54 -288 192 -354 -1348 -1348 236 -1348 -1348 -1348 -1348 171 -1348 -1348 -1348 171 -1348 236 -1348 -1348 -22 -1348 192 -1348 171 -1348 -1348 -1348 -73 6 -15 52 -1348 99 -1348 101 -1348 236 -1348 -1348 -354 182 -247 -27 -280 134 70 -104 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCVBSGGTTCGATYCCS MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 114 E= 4.6e-337 0.403509 0.061404 0.421053 0.114035 0.561404 0.149123 0.254386 0.035088 0.175439 0.201754 0.587719 0.035088 0.350877 0.096491 0.517544 0.035088 0.192982 0.105263 0.131579 0.570175 0.000000 0.771930 0.000000 0.228070 0.289474 0.421053 0.254386 0.035088 0.043860 0.429825 0.245614 0.280702 0.122807 0.280702 0.500000 0.096491 0.210526 0.026316 0.736842 0.026316 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.263158 0.000000 0.736842 0.000000 1.000000 0.000000 0.000000 0.000000 0.184211 0.201754 0.175439 0.438596 0.000000 0.385965 0.000000 0.614035 0.000000 1.000000 0.000000 0.000000 0.026316 0.684211 0.035088 0.254386 0.043860 0.491228 0.315789 0.149123 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCVBSGGTTCGATYCCS MEME-2 regular expression -------------------------------------------------------------------------------- [GA][AG][GC][GA]T[CT][CAG][CTG][GC][GA]GTTC[GA]A[TC][TC]C[CT][CG] -------------------------------------------------------------------------------- Time 505.90 secs. ******************************************************************************** ******************************************************************************** MOTIF GGTSAMARCGWKATGTGATARCCRYTACAC MEME-3 width = 30 sites = 16 llr = 499 E-value = 7.3e-092 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGTSAMARCGWKATGTGATARCCRYTACAC MEME-3 Description -------------------------------------------------------------------------------- Simplified A :1::96a5::3171::37:a4::4::a:a: pos.-specific C 1:34:3::911::1:::3:::aa:4::7:a probability G 99:6:1:519163:a:7:::6::6:::::: matrix T ::7:1:::::63:9:a::a:::::6a:3:: bits 2.4 * ** * 2.1 * ** * ** * 1.9 ** ** * ** * 1.7 ** * ** ** ** ** ** ** Relative 1.4 ** ** * ** ** ** ** ** ** Entropy 1.2 ** ** * ** **** ****** ***** (44.9 bits) 0.9 ***** **** ****************** 0.7 ********** ******************* 0.5 ********** ******************* 0.2 ****************************** 0.0 ------------------------------ Multilevel GGTGAAAACGTGATGTGATAGCCGTTACAC consensus CC C G ATG AC A AC T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTSAMARCGWKATGTGATARCCRYTACAC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chrXVI:210046-210493 + 6 8.16e-19 TCCAC GGTGAAAGCGTGATGTGATAGCCGTTACAC TATATCGGAC chrXIII:290473-291120 - 64 8.16e-19 TCTCCAC GGTGAAAGCGTGATGTGATAGCCGTTACAC TATATCGGAT chrX:115704-116213 + 64 8.16e-19 CGGTCTCCAC GGTGAAAGCGTGATGTGATAGCCGTTACAC TATATCG chrVII:541623-542159 - 18 8.16e-19 CGGTCTCCAC GGTGAAAGCGTGATGTGATAGCCGTTACAC TATATCGGAT chrVII:401397-401771 + 26 8.16e-19 CGGTCTCCAC GGTGAAAGCGTGATGTGATAGCCGTTACAC TATATCGGAA chrV:176903-177402 - 6 8.16e-19 CGGTCTCCAC GGTGAAAGCGTGATGTGATAGCCGTTACAC TATAT chrIX:370216-370602 - 67 8.16e-19 CCAC GGTGAAAGCGTGATGTGATAGCCGTTACAC TATATCGGAT chrII:644931-645395 - 63 8.16e-19 GTCTCCAC GGTGAAAGCGTGATGTGATAGCCGTTACAC TATATCGGAT chrIV:1016964-1017503 + 57 6.69e-17 CGGTCTCCAC GGTGAGAACGTGATGTGATAGCCGTTACAC TACATCGGAT chrXIII:362868-363299 - 40 8.68e-14 GGGTTTCATC GGCCACAACGATGTGTACTAACCACTATAC TAAGATGGCA chrXI:313188-313660 + 60 8.68e-14 GGGTTTCATC GGCCACAACGATGTGTACTAACCACTATAC TAAGATGGCA chrVII:110436-110932 + 24 8.68e-14 GGGTTTCATC GGCCACAACGATGTGTACTAACCACTATAC TAAGATGGCA chrV:434392-434770 + 43 8.68e-14 GGGTTTCATC GGCCACAACGATGTGTACTAACCACTATAC TAAGATGGCG chrV:207131-207603 - 49 8.68e-14 GGGTTTCATC GGCCACAACGATGTGTACTAACCACTATAC TAAGATGGCG chrV:130809-131382 + 70 2.63e-12 GGGTTGTTCG GATCAAAACCGAAAGTGATAACCACTACAC T chrIV:1075330-1075739 + 22 3.16e-12 GGACCTTTGC CGTGTGAAGGCAACGTGATAGCCGCTACAC TATTGGAACA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTSAMARCGWKATGTGATARCCRYTACAC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXVI:210046-210493 8.2e-19 5_[+3]_65 chrXIII:290473-291120 8.2e-19 63_[-3]_7 chrX:115704-116213 8.2e-19 63_[+3]_7 chrVII:541623-542159 8.2e-19 17_[-3]_53 chrVII:401397-401771 8.2e-19 25_[+3]_45 chrV:176903-177402 8.2e-19 5_[-3]_65 chrIX:370216-370602 8.2e-19 66_[-3]_4 chrII:644931-645395 8.2e-19 62_[-3]_8 chrIV:1016964-1017503 6.7e-17 56_[+3]_14 chrXIII:362868-363299 8.7e-14 39_[-3]_31 chrXI:313188-313660 8.7e-14 59_[+3]_11 chrVII:110436-110932 8.7e-14 23_[+3]_47 chrV:434392-434770 8.7e-14 42_[+3]_28 chrV:207131-207603 8.7e-14 48_[-3]_22 chrV:130809-131382 2.6e-12 69_[+3]_1 chrIV:1075330-1075739 3.2e-12 21_[+3]_49 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTSAMARCGWKATGTGATARCCRYTACAC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGTSAMARCGWKATGTGATARCCRYTACAC width=30 seqs=16 chrXVI:210046-210493 ( 6) GGTGAAAGCGTGATGTGATAGCCGTTACAC 1 chrXIII:290473-291120 ( 64) GGTGAAAGCGTGATGTGATAGCCGTTACAC 1 chrX:115704-116213 ( 64) GGTGAAAGCGTGATGTGATAGCCGTTACAC 1 chrVII:541623-542159 ( 18) GGTGAAAGCGTGATGTGATAGCCGTTACAC 1 chrVII:401397-401771 ( 26) GGTGAAAGCGTGATGTGATAGCCGTTACAC 1 chrV:176903-177402 ( 6) GGTGAAAGCGTGATGTGATAGCCGTTACAC 1 chrIX:370216-370602 ( 67) GGTGAAAGCGTGATGTGATAGCCGTTACAC 1 chrII:644931-645395 ( 63) GGTGAAAGCGTGATGTGATAGCCGTTACAC 1 chrIV:1016964-1017503 ( 57) GGTGAGAACGTGATGTGATAGCCGTTACAC 1 chrXIII:362868-363299 ( 40) GGCCACAACGATGTGTACTAACCACTATAC 1 chrXI:313188-313660 ( 60) GGCCACAACGATGTGTACTAACCACTATAC 1 chrVII:110436-110932 ( 24) GGCCACAACGATGTGTACTAACCACTATAC 1 chrV:434392-434770 ( 43) GGCCACAACGATGTGTACTAACCACTATAC 1 chrV:207131-207603 ( 49) GGCCACAACGATGTGTACTAACCACTATAC 1 chrV:130809-131382 ( 70) GATCAAAACCGAAAGTGATAACCACTACAC 1 chrIV:1075330-1075739 ( 22) CGTGTGAAGGCAACGTGATAGCCGCTACAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTSAMARCGWKATGTGATARCCRYTACAC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 37559 bayes= 11.1963 E= 7.3e-092 -1064 -163 227 -1064 -229 -1064 227 -1064 -1064 69 -1064 117 -1064 95 169 -1064 162 -1064 -1064 -229 88 69 -64 -1064 171 -1064 -1064 -1064 71 -1064 136 -1064 -1064 227 -163 -1064 -1064 -163 227 -1064 3 -163 -163 88 -129 -1064 153 3 117 -1064 69 -1064 -229 -163 -1064 152 -1064 -1064 236 -1064 -1064 -1064 -1064 171 3 -1064 182 -1064 117 69 -1064 -1064 -1064 -1064 -1064 171 171 -1064 -1064 -1064 29 -1064 169 -1064 -1064 236 -1064 -1064 -1064 236 -1064 -1064 29 -1064 169 -1064 -1064 117 -1064 88 -1064 -1064 -1064 171 171 -1064 -1064 -1064 -1064 182 -1064 3 171 -1064 -1064 -1064 -1064 236 -1064 -1064 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTSAMARCGWKATGTGATARCCRYTACAC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 16 E= 7.3e-092 0.000000 0.062500 0.937500 0.000000 0.062500 0.000000 0.937500 0.000000 0.000000 0.312500 0.000000 0.687500 0.000000 0.375000 0.625000 0.000000 0.937500 0.000000 0.000000 0.062500 0.562500 0.312500 0.125000 0.000000 1.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.500000 0.000000 0.000000 0.937500 0.062500 0.000000 0.000000 0.062500 0.937500 0.000000 0.312500 0.062500 0.062500 0.562500 0.125000 0.000000 0.562500 0.312500 0.687500 0.000000 0.312500 0.000000 0.062500 0.062500 0.000000 0.875000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.312500 0.000000 0.687500 0.000000 0.687500 0.312500 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.375000 0.000000 0.625000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.375000 0.000000 0.625000 0.000000 0.000000 0.437500 0.000000 0.562500 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.687500 0.000000 0.312500 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTSAMARCGWKATGTGATARCCRYTACAC MEME-3 regular expression -------------------------------------------------------------------------------- GG[TC][GC]A[AC]A[AG]CG[TA][GT][AG]TGT[GA][AC]TA[GA]CC[GA][TC]TA[CT]AC -------------------------------------------------------------------------------- Time 733.11 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrI:1-1137 6.66e-03 28_[+1(3.38e-06)]_51 chrI:71824-73287 7.18e-02 100 chrI:81906-82384 2.53e-01 100 chrI:138889-139351 6.13e-01 100 chrI:142170-143563 2.78e-01 100 chrI:166055-166561 5.60e-14 13_[+1(3.05e-09)]_16_[+2(9.48e-11)]_\ 29 chrI:180945-181508 5.07e-03 47_[+2(3.85e-06)]_32 chrI:182359-182775 1.27e-10 14_[-2(1.91e-07)]_25_[-1(7.38e-11)]_\ 19 chrI:229183-230205 1.20e-02 1_[-1(3.38e-06)]_78 chrII:9372-9841 5.38e-09 31_[+1(1.39e-09)]_27_[+2(8.14e-07)] chrII:36175-36600 2.19e-04 65_[+1(5.69e-08)]_14 chrII:44940-45383 6.70e-01 100 chrII:60813-61431 3.95e-01 100 chrII:89610-90194 6.72e-01 100 chrII:159342-160200 9.95e-02 100 chrII:165099-165400 1.32e-01 100 chrII:167757-168243 4.06e-01 100 chrII:181326-181697 5.88e-01 100 chrII:197266-197870 1.91e-06 18_[+2(4.42e-10)]_61 chrII:226868-227350 1.27e-10 20_[+1(7.38e-11)]_25_[+2(1.91e-07)]_\ 13 chrII:266180-266646 3.47e-10 19_[+1(6.25e-09)]_16_[+2(1.02e-08)]_\ 23 chrII:326525-327066 4.12e-05 56_[-2(5.28e-09)]_23 chrII:332180-332769 9.60e-01 100 chrII:347418-348063 7.05e-01 100 chrII:350597-351096 1.32e-16 39_[-3(2.63e-12)]_2_[+2(3.48e-09)]_\ 8 chrII:405680-406221 3.97e-10 18_[+2(3.48e-09)]_25_[+1(3.19e-06)]_\ 15 chrII:415490-415951 2.62e-01 100 chrII:476816-477486 2.64e-01 100 chrII:504506-505266 3.05e-01 100 chrII:544569-544838 7.42e-01 100 chrII:563843-564197 2.00e-01 100 chrII:592316-593498 3.33e-01 100 chrII:604064-606127 5.83e-01 100 chrII:642853-643454 9.12e-01 100 chrII:644931-645395 1.64e-14 62_[-3(8.16e-19)]_8 chrII:680378-680767 4.15e-01 100 chrII:681416-682255 5.06e-01 100 chrIII:1-1530 9.61e-01 100 chrIII:15366-16746 2.00e-03 20_[+2(4.88e-05)]_59 chrIII:58647-59161 9.52e-01 100 chrIII:82384-82738 4.45e-01 100 chrIII:123388-123786 4.18e-09 49_[-2(2.84e-13)]_30 chrIII:127508-127880 9.05e-05 76_[+1(6.25e-09)]_3 chrIII:142634-143170 5.69e-01 100 chrIII:163476-163893 2.32e-01 100 chrIII:168106-168615 1.32e-16 [-2(3.48e-09)]_2_[+3(2.63e-12)]_47 chrIII:177195-178757 9.23e-01 100 chrIII:227761-228216 2.00e-09 8_[+1(4.59e-10)]_44_[+2(8.14e-07)]_\ 6 chrIII:262726-262973 6.28e-01 100 chrIII:294961-295824 1.58e-01 100 chrIII:315657-316620 7.91e-01 100 chrIV:13-368 2.55e-01 100 chrIV:45196-45917 7.23e-01 100 chrIV:83301-83791 3.90e-05 56_[+1(4.38e-07)]_23 chrIV:117129-118226 1.72e-01 100 chrIV:130114-131044 8.01e-01 100 chrIV:217191-218024 6.96e-01 100 chrIV:221934-222373 1.58e-01 100 chrIV:229463-230513 3.07e-01 100 chrIV:308012-308672 5.43e-01 100 chrIV:321625-321969 9.57e-01 100 chrIV:341219-341651 7.51e-01 100 chrIV:355560-356697 8.69e-01 100 chrIV:358040-358451 6.15e-01 100 chrIV:359348-359796 1.70e-05 59_[+1(4.42e-09)]_20 chrIV:410175-410683 1.84e-13 4_[+1(3.05e-09)]_16_[+2(8.76e-10)]_\ 38 chrIV:411253-411668 3.14e-01 100 chrIV:434035-434527 3.47e-10 42_[-2(1.02e-08)]_16_[-1(6.25e-09)] chrIV:437538-438017 1.13e-06 49_[+1(7.38e-11)]_30 chrIV:488429-489135 4.72e-05 74_[-2(5.28e-09)]_5 chrIV:490970-491284 8.89e-01 100 chrIV:519565-519910 4.96e-06 60_[+1(1.39e-09)]_19 chrIV:520752-521187 2.30e-11 61_[-3(2.63e-12)]_9 chrIV:538955-539238 9.55e-02 100 chrIV:568701-569315 1.89e-08 10_[+1(3.19e-06)]_15_[+2(2.26e-07)]_\ 33 chrIV:579007-580740 1.21e-01 100 chrIV:619708-620429 9.06e-01 100 chrIV:644748-645398 9.58e-01 100 chrIV:667763-668247 1.91e-06 61_[-2(4.42e-10)]_18 chrIV:802585-803008 4.78e-12 17_[+3(2.63e-12)]_53 chrIV:835752-837111 6.56e-01 100 chrIV:884175-884576 2.75e-06 40_[+1(3.85e-08)]_39 chrIV:946137-946608 2.97e-04 47_[+2(1.22e-07)]_32 chrIV:980769-981264 1.27e-10 17_[-2(1.91e-07)]_25_[-1(7.38e-11)]_\ 16 chrIV:992627-993021 1.32e-03 62_[+1(4.38e-07)]_17 chrIV:1013410-1013954 3.99e-01 100 chrIV:1016964-1017503 3.37e-19 33_[-2(7.40e-10)]_2_[+3(6.69e-17)]_\ 14 chrIV:1075330-1075739 3.09e-09 21_[+3(3.16e-12)]_49 chrIV:1094922-1095678 9.42e-01 100 chrIV:1150704-1151182 7.38e-06 22_[-1(9.09e-10)]_57 chrIV:1175601-1176038 1.56e-03 64_[+1(5.24e-07)]_15 chrIV:1201464-1202033 1.19e-04 56_[+1(8.24e-08)]_23 chrIV:1239539-1239824 2.94e-01 100 chrIV:1256896-1257300 1.94e-03 5_[-1(1.47e-06)]_74 chrIV:1278622-1279070 1.32e-01 100 chrIV:1300748-1301340 9.06e-01 100 chrIV:1305405-1305903 1.01e-10 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39_[-3(8.68e-14)]_2_[+2(1.62e-06)]_\ 8 chrXIII:372198-372729 2.97e-10 41_[-2(8.95e-09)]_17_[-1(1.64e-08)] chrXIII:378996-379610 2.31e-04 59_[-2(7.59e-08)]_20 chrXIII:420348-420873 2.97e-10 37_[-2(8.95e-09)]_17_[-1(1.64e-08)]_\ 4 chrXIII:463268-463868 1.89e-08 40_[+1(3.19e-06)]_15_[+2(2.26e-07)]_\ 3 chrXIII:480409-480864 1.50e-06 44_[-2(7.40e-10)]_35 chrXIII:504675-505154 2.97e-04 35_[+1(2.93e-08)]_44 chrXIII:550041-552307 4.39e-03 18_[+1(5.24e-05)]_61 chrXIII:572567-573322 5.74e-04 35_[-1(5.24e-07)]_44 chrXIII:586446-586910 2.97e-10 17_[-2(8.95e-09)]_17_[-1(1.64e-08)]_\ 24 chrXIII:605791-606039 8.08e-01 100 chrXIII:650755-651191 6.33e-01 100 chrXIII:731647-733412 6.71e-01 100 chrXIII:747636-748141 5.26e-05 63_[-2(3.48e-09)]_16 chrXIII:751331-751507 4.77e-02 100 chrXIII:754404-755076 7.76e-01 100 chrXIII:768009-768641 1.00e+00 100 chrXIII:808104-808538 3.83e-11 7_[+3(4.54e-12)]_63 chrXIII:837705-838226 1.88e-07 17_[+1(3.64e-07)]_32_[+2(1.22e-07)]_\ 9 chrXIII:861193-861503 5.12e-02 100 chrXIII:872666-872943 6.85e-02 100 chrXIII:887043-888436 4.76e-01 100 chrXIII:923399-924382 6.44e-01 100 chrXIV:6485-7153 8.39e-03 5_[-1(7.65e-06)]_74 chrXIV:63106-63545 5.41e-01 100 chrXIV:96041-96632 1.81e-03 [-1(2.20e-06)]_13_[+1(1.25e-05)]_45 chrXIV:102502-102949 8.86e-05 45_[+1(6.25e-09)]_34 chrXIV:104586-105583 9.99e-01 100 chrXIV:241389-242549 1.88e-02 4_[-3(1.35e-05)]_66 chrXIV:330778-331146 1.22e-01 38_[-1(4.75e-05)]_41 chrXIV:374719-375101 8.40e-09 13_[+1(3.36e-08)]_34_[+2(1.11e-07)]_\ 11 chrXIV:442768-443243 3.20e-04 55_[+1(2.93e-08)]_24 chrXIV:444232-444807 1.16e-01 100 chrXIV:495195-495617 8.49e-01 100 chrXIV:499294-500699 5.24e-01 100 chrXIV:546953-547413 8.91e-07 32_[+2(3.69e-10)]_47 chrXIV:560575-561012 5.94e-01 100 chrXIV:567902-568372 4.81e-04 32_[+1(4.79e-07)]_47 chrXIV:569696-570162 5.27e-06 35_[-1(3.61e-10)]_44 chrXIV:602108-602531 2.16e-06 47_[+1(3.61e-10)]_32 chrXIV:631716-632142 7.96e-03 12_[-1(7.65e-06)]_67 chrXIV:632416-632875 1.67e-09 8_[+1(6.25e-09)]_17_[+2(5.61e-08)]_\ 33 chrXIV:725972-726418 3.42e-06 46_[-1(1.39e-09)]_33 chrXIV:783464-784327 2.02e-01 100 chrXV:1-1000 7.67e-01 100 chrXV:29295-30318 6.61e-01 100 chrXV:79713-80155 3.02e-01 100 chrXV:80428-81499 7.01e-01 100 chrXV:92772-94817 8.46e-01 100 chrXV:109504-109995 5.98e-01 100 chrXV:110844-111268 9.31e-03 1_[-1(2.20e-06)]_78 chrXV:113470-113956 4.43e-01 100 chrXV:159297-160685 9.40e-01 100 chrXV:161109-161441 7.32e-01 100 chrXV:167973-168451 3.40e-02 100 chrXV:216242-216708 8.71e-01 100 chrXV:226421-226876 3.35e-09 22_[-2(1.42e-09)]_14_[-1(4.38e-07)]_\ 22 chrXV:228081-228668 1.67e-09 11_[+1(6.25e-09)]_17_[+2(5.61e-08)]_\ 30 chrXV:253771-254135 6.34e-01 100 chrXV:274476-275007 1.61e-03 51_[+2(9.92e-07)]_28 chrXV:281988-282550 9.20e-01 100 chrXV:288032-288424 1.93e-07 18_[+1(3.64e-07)]_32_[+2(1.22e-07)]_\ 8 chrXV:300865-301431 7.63e-10 3_[+1(4.79e-07)]_45_[+2(3.69e-10)]_\ 10 chrXV:340146-340575 8.30e-05 35_[-1(1.63e-07)]_44 chrXV:353897-354326 4.89e-05 26_[-1(6.25e-09)]_53 chrXV:407672-408093 5.66e-01 100 chrXV:438457-439024 8.52e-06 17_[+2(6.05e-09)]_62 chrXV:464260-464665 4.81e-04 42_[+1(4.79e-07)]_37 chrXV:487271-487728 1.15e-04 32_[+2(5.61e-08)]_47 chrXV:504978-505499 3.81e-01 100 chrXV:571436-572147 9.87e-01 100 chrXV:594253-594652 4.94e-01 100 chrXV:639168-639416 6.47e-01 100 chrXV:663515-664235 5.44e-06 34_[-1(1.64e-08)]_45 chrXV:678645-679199 3.92e-01 100 chrXV:710014-710705 9.90e-01 100 chrXV:779677-780943 6.30e-01 100 chrXV:854023-854438 5.60e-14 16_[-2(9.48e-11)]_16_[-1(3.05e-09)]_\ 26 chrXV:866183-868103 7.67e-01 100 chrXV:881789-882396 9.76e-01 100 chrXV:901451-901654 8.96e-01 100 chrXV:908912-909065 2.35e-01 100 chrXV:925183-925450 3.49e-01 100 chrXV:968139-968494 5.96e-01 100 chrXV:976185-976666 3.31e-04 50_[+1(5.24e-07)]_29 chrXV:978822-979174 1.17e-01 100 chrXV:980489-981046 2.38e-06 39_[+2(3.69e-10)]_40 chrXV:1003964-1004412 2.71e-01 100 chrXV:1025698-1026084 1.05e-01 9_[-3(8.88e-05)]_61 chrXV:1028673-1029424 8.78e-01 100 chrXV:1091139-1091290 8.00e-01 100 chrXVI:55850-56496 3.14e-04 55_[-2(7.59e-08)]_24 chrXVI:76195-76824 7.62e-02 100 chrXVI:135522-135820 6.45e-01 100 chrXVI:172856-173942 8.30e-01 100 chrXVI:188585-188935 8.92e-02 100 chrXVI:194108-194519 7.47e-01 100 chrXVI:210046-210493 9.96e-15 5_[+3(8.16e-19)]_65 chrXVI:280016-280215 3.24e-01 100 chrXVI:280635-281949 4.70e-01 100 chrXVI:282174-282947 4.03e-01 100 chrXVI:302624-302961 8.76e-01 100 chrXVI:338457-339143 7.50e-01 100 chrXVI:340549-340758 6.54e-02 100 chrXVI:378656-379002 8.18e-02 26_[+1(8.76e-05)]_53 chrXVI:406197-406655 4.86e-01 100 chrXVI:435654-436185 7.93e-04 33_[-2(8.70e-07)]_46 chrXVI:519507-520523 7.34e-01 100 chrXVI:560039-560487 3.03e-04 50_[-1(5.69e-08)]_29 chrXVI:572046-572533 3.35e-09 34_[+1(4.38e-07)]_14_[+2(1.42e-09)]_\ 10 chrXVI:581834-582302 1.19e-04 48_[+1(8.24e-08)]_31 chrXVI:622346-622819 3.52e-08 17_[-2(1.11e-07)]_35_[-1(5.69e-08)]_\ 6 chrXVI:689362-689853 2.09e-09 12_[+1(4.59e-10)]_25_[+2(8.14e-07)]_\ 21 chrXVI:699651-700380 9.00e-01 100 chrXVI:731897-732301 3.82e-01 100 chrXVI:744053-744587 1.04e-04 54_[+2(1.75e-07)]_25 chrXVI:768705-768883 4.61e-01 100 chrXVI:769026-769493 7.00e-11 7_[-2(6.05e-09)]_39_[-1(4.42e-09)]_\ 12 chrXVI:775650-776180 9.17e-01 100 chrXVI:786242-787192 9.17e-01 100 chrXVI:794470-794819 9.88e-01 100 chrXVI:810481-810861 4.91e-06 59_[+1(6.25e-09)]_20 chrXVI:819330-819981 8.28e-01 100 chrXVI:856754-857065 9.32e-08 47_[+1(3.05e-09)]_32 chrXVI:860136-860661 3.35e-09 35_[+1(4.38e-07)]_14_[+2(1.42e-09)]_\ 9 chrXVI:880174-880734 3.46e-01 100 chrXVI:901472-901816 8.39e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************