******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--INO80/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrI:2-1115 1.0000 100 chrI:71630-73637 1.0000 100 chrI:81927-82294 1.0000 100 chrI:138903-139376 1.0000 100 chrI:142116-143598 1.0000 100 chrI:166030-166557 1.0000 100 chrI:180926-181455 1.0000 100 chrI:182348-182806 1.0000 100 chrI:229114-230195 1.0000 100 chrII:9355-9984 1.0000 100 chrII:36154-36595 1.0000 100 chrII:44930-45386 1.0000 100 chrII:59833-61295 1.0000 100 chrII:87940-88583 1.0000 100 chrII:89647-90036 1.0000 100 chrII:165076-165413 1.0000 100 chrII:167311-169658 1.0000 100 chrII:181273-181641 1.0000 100 chrII:197228-197899 1.0000 100 chrII:226855-227354 1.0000 100 chrII:266116-266643 1.0000 100 chrII:326569-327119 1.0000 100 chrII:332190-333694 1.0000 100 chrII:347377-347880 1.0000 100 chrII:350587-351055 1.0000 100 chrII:405596-406299 1.0000 100 chrII:415485-415928 1.0000 100 chrII:477093-477781 1.0000 100 chrII:504518-504724 1.0000 100 chrII:544569-544867 1.0000 100 chrII:592337-593522 1.0000 100 chrII:604051-607118 1.0000 100 chrII:642856-643444 1.0000 100 chrII:644960-645414 1.0000 100 chrII:680385-682183 1.0000 100 chrIII:2-1718 1.0000 100 chrIII:11081-11516 1.0000 100 chrIII:14046-16909 1.0000 100 chrIII:58704-59006 1.0000 100 chrIII:82019-82746 1.0000 100 chrIII:123366-123818 1.0000 100 chrIII:127502-127897 1.0000 100 chrIII:142343-142998 1.0000 100 chrIII:163477-163889 1.0000 100 chrIII:168128-168610 1.0000 100 chrIII:177079-178797 1.0000 100 chrIII:227726-228218 1.0000 100 chrIII:294624-295841 1.0000 100 chrIII:315634-316620 1.0000 100 chrIV:28-374 1.0000 100 chrIV:83314-83751 1.0000 100 chrIV:116927-118226 1.0000 100 chrIV:129940-131018 1.0000 100 chrIV:216572-218067 1.0000 100 chrIV:220965-222386 1.0000 100 chrIV:229434-230702 1.0000 100 chrIV:307946-310167 1.0000 100 chrIV:321605-321978 1.0000 100 chrIV:340376-341779 1.0000 100 chrIV:358033-358482 1.0000 100 chrIV:359333-359854 1.0000 100 chrIV:410157-410701 1.0000 100 chrIV:411244-411661 1.0000 100 chrIV:434017-434541 1.0000 100 chrIV:437529-438003 1.0000 100 chrIV:488406-489158 1.0000 100 chrIV:490929-492763 1.0000 100 chrIV:519545-519966 1.0000 100 chrIV:520308-520542 1.0000 100 chrIV:520722-521294 1.0000 100 chrIV:538925-539245 1.0000 100 chrIV:568686-569296 1.0000 100 chrIV:578841-580721 1.0000 100 chrIV:619688-620243 1.0000 100 chrIV:644958-645389 1.0000 100 chrIV:667769-668279 1.0000 100 chrIV:721157-721487 1.0000 100 chrIV:802571-803001 1.0000 100 chrIV:835772-836586 1.0000 100 chrIV:884164-884682 1.0000 100 chrIV:915287-916219 1.0000 100 chrIV:946129-946625 1.0000 100 chrIV:980745-981282 1.0000 100 chrIV:992595-993067 1.0000 100 chrIV:1013069-1013974 1.0000 100 chrIV:1016961-1017507 1.0000 100 chrIV:1075286-1075775 1.0000 100 chrIV:1095107-1095700 1.0000 100 chrIV:1150654-1151188 1.0000 100 chrIV:1175591-1176084 1.0000 100 chrIV:1201524-1202055 1.0000 100 chrIV:1256898-1257295 1.0000 100 chrIV:1278635-1279029 1.0000 100 chrIV:1300720-1301364 1.0000 100 chrIV:1305408-1305897 1.0000 100 chrIV:1352272-1352749 1.0000 100 chrIV:1354444-1356262 1.0000 100 chrIV:1359235-1360818 1.0000 100 chrIV:1401216-1401895 1.0000 100 chrIV:1450340-1451459 1.0000 100 chrIV:1461500-1462065 1.0000 100 chrIV:1489074-1489907 1.0000 100 chrIV:1524129-1525657 1.0000 100 chrIX:0-231 1.0000 100 chrIX:68176-68545 1.0000 100 chrIX:98427-100049 1.0000 100 chrIX:131866-132095 1.0000 100 chrIX:174827-175298 1.0000 100 chrIX:183281-183723 1.0000 100 chrIX:197316-197800 1.0000 100 chrIX:210504-210916 1.0000 100 chrIX:232729-233192 1.0000 100 chrIX:248629-249370 1.0000 100 chrIX:254214-254563 1.0000 100 chrIX:257339-258271 1.0000 100 chrIX:300001-300512 1.0000 100 chrIX:316113-318214 1.0000 100 chrIX:324133-324616 1.0000 100 chrIX:325501-326063 1.0000 100 chrIX:336116-336685 1.0000 100 chrIX:370214-370636 1.0000 100 chrIX:438667-439887 1.0000 100 chrV:6161-7044 1.0000 100 chrV:13334-13611 1.0000 100 chrV:53518-53962 1.0000 100 chrV:61062-62183 1.0000 100 chrV:69100-69300 1.0000 100 chrV:85117-86867 1.0000 100 chrV:99889-100356 1.0000 100 chrV:117639-118313 1.0000 100 chrV:130845-131385 1.0000 100 chrV:135147-135691 1.0000 100 chrV:138433-140899 1.0000 100 chrV:152151-153011 1.0000 100 chrV:176818-177396 1.0000 100 chrV:207117-207686 1.0000 100 chrV:250073-250520 1.0000 100 chrV:270374-270709 1.0000 100 chrV:288181-288736 1.0000 100 chrV:305772-306924 1.0000 100 chrV:311775-312310 1.0000 100 chrV:321795-323178 1.0000 100 chrV:354679-355371 1.0000 100 chrV:362139-363260 1.0000 100 chrV:396137-397902 1.0000 100 chrV:423076-424326 1.0000 100 chrV:430975-431569 1.0000 100 chrV:434380-434786 1.0000 100 chrV:435583-436048 1.0000 100 chrV:438481-438986 1.0000 100 chrV:441785-442676 1.0000 100 chrV:443040-443504 1.0000 100 chrV:469247-469661 1.0000 100 chrV:487088-487697 1.0000 100 chrV:492187-492571 1.0000 100 chrV:551115-551581 1.0000 100 chrVI:4472-5878 1.0000 100 chrVI:63950-65389 1.0000 100 chrVI:95479-95869 1.0000 100 chrVI:101147-101596 1.0000 100 chrVI:106602-106841 1.0000 100 chrVI:137241-137806 1.0000 100 chrVI:157714-158261 1.0000 100 chrVI:161999-162404 1.0000 100 chrVI:167174-167699 1.0000 100 chrVI:180689-181258 1.0000 100 chrVI:191328-191822 1.0000 100 chrVI:204741-205215 1.0000 100 chrVI:210424-210893 1.0000 100 chrVI:220770-222116 1.0000 100 chrVI:223319-224180 1.0000 100 chrVI:226535-226951 1.0000 100 chrVI:269249-270160 1.0000 100 chrVII:9-1311 1.0000 100 chrVII:1679-1873 1.0000 100 chrVII:23930-25457 1.0000 100 chrVII:73689-74169 1.0000 100 chrVII:110431-110954 1.0000 100 chrVII:115236-115803 1.0000 100 chrVII:122046-122538 1.0000 100 chrVII:148109-149552 1.0000 100 chrVII:185379-185992 1.0000 100 chrVII:205308-205778 1.0000 100 chrVII:254095-254737 1.0000 100 chrVII:276883-278714 1.0000 100 chrVII:287050-287740 1.0000 100 chrVII:291583-291947 1.0000 100 chrVII:310467-312229 1.0000 100 chrVII:319578-320125 1.0000 100 chrVII:328351-328912 1.0000 100 chrVII:329131-329729 1.0000 100 chrVII:364894-366660 1.0000 100 chrVII:371205-371504 1.0000 100 chrVII:400851-401797 1.0000 100 chrVII:405265-405768 1.0000 100 chrVII:412086-412586 1.0000 100 chrVII:422685-423497 1.0000 100 chrVII:437536-439944 1.0000 100 chrVII:440485-443102 1.0000 100 chrVII:479282-482867 1.0000 100 chrVII:483431-483671 1.0000 100 chrVII:531388-531812 1.0000 100 chrVII:533847-535239 1.0000 100 chrVII:541614-542217 1.0000 100 chrVII:544301-544893 1.0000 100 chrVII:555072-556680 1.0000 100 chrVII:561020-561964 1.0000 100 chrVII:609337-609908 1.0000 100 chrVII:648768-649386 1.0000 100 chrVII:661507-661975 1.0000 100 chrVII:700320-701260 1.0000 100 chrVII:706903-707357 1.0000 100 chrVII:726283-726782 1.0000 100 chrVII:726977-728169 1.0000 100 chrVII:730902-731440 1.0000 100 chrVII:736186-736571 1.0000 100 chrVII:738890-739457 1.0000 100 chrVII:774110-774651 1.0000 100 chrVII:779372-779896 1.0000 100 chrVII:788321-788778 1.0000 100 chrVII:794170-794622 1.0000 100 chrVII:823266-823696 1.0000 100 chrVII:828458-829036 1.0000 100 chrVII:845382-845899 1.0000 100 chrVII:856688-856998 1.0000 100 chrVII:857213-857660 1.0000 100 chrVII:876032-876730 1.0000 100 chrVII:878594-879037 1.0000 100 chrVII:882387-883943 1.0000 100 chrVII:919914-920264 1.0000 100 chrVII:930642-931252 1.0000 100 chrVII:1000316-1000630 1.0000 100 chrVII:1003998-1004454 1.0000 100 chrVIII:34478-36386 1.0000 100 chrVIII:62517-62951 1.0000 100 chrVIII:74915-76219 1.0000 100 chrVIII:85165-85564 1.0000 100 chrVIII:103850-104721 1.0000 100 chrVIII:115921-116441 1.0000 100 chrVIII:125898-127062 1.0000 100 chrVIII:132855-133334 1.0000 100 chrVIII:134083-134549 1.0000 100 chrVIII:145906-146464 1.0000 100 chrVIII:148939-149317 1.0000 100 chrVIII:174994-175384 1.0000 100 chrVIII:237741-238144 1.0000 100 chrVIII:296743-297281 1.0000 100 chrVIII:353368-353620 1.0000 100 chrVIII:358282-358789 1.0000 100 chrVIII:381507-383387 1.0000 100 chrVIII:388662-389226 1.0000 100 chrVIII:410993-411668 1.0000 100 chrVIII:451312-452998 1.0000 100 chrVIII:455600-455877 1.0000 100 chrVIII:466728-467364 1.0000 100 chrVIII:475467-475919 1.0000 100 chrVIII:505317-506230 1.0000 100 chrVIII:555807-557196 1.0000 100 chrVIII:562290-562580 1.0000 100 chrX:58950-59554 1.0000 100 chrX:73364-75719 1.0000 100 chrX:90025-90451 1.0000 100 chrX:115710-116204 1.0000 100 chrX:139157-140443 1.0000 100 chrX:157429-157918 1.0000 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chrXI:74389-74926 1.0000 100 chrXI:83951-84476 1.0000 100 chrXI:99734-99966 1.0000 100 chrXI:108330-110143 1.0000 100 chrXI:140783-141457 1.0000 100 chrXI:158121-159228 1.0000 100 chrXI:162278-162773 1.0000 100 chrXI:163268-164491 1.0000 100 chrXI:202813-203307 1.0000 100 chrXI:219678-220095 1.0000 100 chrXI:302672-303246 1.0000 100 chrXI:307869-308427 1.0000 100 chrXI:313195-313673 1.0000 100 chrXI:322433-322755 1.0000 100 chrXI:326084-327520 1.0000 100 chrXI:379409-379920 1.0000 100 chrXI:382176-382464 1.0000 100 chrXI:430827-431692 1.0000 100 chrXI:458359-458918 1.0000 100 chrXI:490724-491237 1.0000 100 chrXI:513145-513609 1.0000 100 chrXI:517774-518232 1.0000 100 chrXI:578776-579297 1.0000 100 chrXI:617736-619253 1.0000 100 chrXI:665680-666798 1.0000 100 chrXII:5-241 1.0000 100 chrXII:5470-5923 1.0000 100 chrXII:11013-11986 1.0000 100 chrXII:47545-49143 1.0000 100 chrXII:84086-84470 1.0000 100 chrXII:92294-92927 1.0000 100 chrXII:167756-168268 1.0000 100 chrXII:198687-199659 1.0000 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chrXII:784080-784595 1.0000 100 chrXII:795574-797383 1.0000 100 chrXII:818475-819659 1.0000 100 chrXII:837642-839392 1.0000 100 chrXII:875196-875665 1.0000 100 chrXII:897667-899609 1.0000 100 chrXII:903403-903973 1.0000 100 chrXII:921700-922596 1.0000 100 chrXII:932062-932524 1.0000 100 chrXII:962809-963342 1.0000 100 chrXII:975782-976282 1.0000 100 chrXII:1012106-1012436 1.0000 100 chrXII:1017788-1019420 1.0000 100 chrXII:1028184-1028597 1.0000 100 chrXII:1051838-1052402 1.0000 100 chrXII:1064071-1065374 1.0000 100 chrXIII:20-204 1.0000 100 chrXIII:5329-5769 1.0000 100 chrXIII:23746-25903 1.0000 100 chrXIII:91593-92137 1.0000 100 chrXIII:123238-124846 1.0000 100 chrXIII:131429-132125 1.0000 100 chrXIII:145869-147241 1.0000 100 chrXIII:168584-169055 1.0000 100 chrXIII:183756-184161 1.0000 100 chrXIII:195908-196408 1.0000 100 chrXIII:224050-224419 1.0000 100 chrXIII:225271-225751 1.0000 100 chrXIII:258963-259433 1.0000 100 chrXIII:267891-268587 1.0000 100 chrXIII:290578-291577 1.0000 100 chrXIII:296583-298952 1.0000 100 chrXIII:302819-303108 1.0000 100 chrXIII:320922-321330 1.0000 100 chrXIII:352064-352520 1.0000 100 chrXIII:362886-363331 1.0000 100 chrXIII:372204-372719 1.0000 100 chrXIII:379082-379658 1.0000 100 chrXIII:420309-420853 1.0000 100 chrXIII:463281-463886 1.0000 100 chrXIII:480391-480925 1.0000 100 chrXIII:504681-505244 1.0000 100 chrXIII:549843-551790 1.0000 100 chrXIII:551949-553213 1.0000 100 chrXIII:572689-573213 1.0000 100 chrXIII:586414-586930 1.0000 100 chrXIII:626218-626894 1.0000 100 chrXIII:632178-634828 1.0000 100 chrXIII:650755-652902 1.0000 100 chrXIII:731931-733525 1.0000 100 chrXIII:747751-748162 1.0000 100 chrXIII:753333-754868 1.0000 100 chrXIII:768188-768662 1.0000 100 chrXIII:807800-808569 1.0000 100 chrXIII:837710-838251 1.0000 100 chrXIII:872682-872945 1.0000 100 chrXIII:923258-924379 1.0000 100 chrXIV:6464-7210 1.0000 100 chrXIV:61970-64548 1.0000 100 chrXIV:88932-89669 1.0000 100 chrXIV:96035-96553 1.0000 100 chrXIV:102493-103105 1.0000 100 chrXIV:104577-105110 1.0000 100 chrXIV:241373-241776 1.0000 100 chrXIV:330601-331134 1.0000 100 chrXIV:374676-375099 1.0000 100 chrXIV:442809-444837 1.0000 100 chrXIV:495186-495791 1.0000 100 chrXIV:499275-500741 1.0000 100 chrXIV:546939-547408 1.0000 100 chrXIV:560114-561013 1.0000 100 chrXIV:567866-568540 1.0000 100 chrXIV:569708-570139 1.0000 100 chrXIV:575154-576120 1.0000 100 chrXIV:602126-602534 1.0000 100 chrXIV:631700-632136 1.0000 100 chrXIV:632391-632898 1.0000 100 chrXIV:715667-716594 1.0000 100 chrXIV:725986-726424 1.0000 100 chrXIV:783450-784325 1.0000 100 chrXV:1-1024 1.0000 100 chrXV:79724-80147 1.0000 100 chrXV:92105-94859 1.0000 100 chrXV:109533-110031 1.0000 100 chrXV:110823-111275 1.0000 100 chrXV:113559-113978 1.0000 100 chrXV:159288-160715 1.0000 100 chrXV:161084-161451 1.0000 100 chrXV:167958-168599 1.0000 100 chrXV:216264-216673 1.0000 100 chrXV:226479-226891 1.0000 100 chrXV:228127-228592 1.0000 100 chrXV:253142-254729 1.0000 100 chrXV:274449-275069 1.0000 100 chrXV:281958-282419 1.0000 100 chrXV:288008-288436 1.0000 100 chrXV:300857-301357 1.0000 100 chrXV:340127-340582 1.0000 100 chrXV:353849-354443 1.0000 100 chrXV:438439-438966 1.0000 100 chrXV:444618-446138 1.0000 100 chrXV:464234-464720 1.0000 100 chrXV:487212-487686 1.0000 100 chrXV:505105-505487 1.0000 100 chrXV:571730-572322 1.0000 100 chrXV:594190-594681 1.0000 100 chrXV:663479-664108 1.0000 100 chrXV:677912-679202 1.0000 100 chrXV:709997-710746 1.0000 100 chrXV:779670-780952 1.0000 100 chrXV:832370-832786 1.0000 100 chrXV:853901-854434 1.0000 100 chrXV:866522-868101 1.0000 100 chrXV:901412-901748 1.0000 100 chrXV:968117-968432 1.0000 100 chrXV:976171-976677 1.0000 100 chrXV:978799-979144 1.0000 100 chrXV:980480-981014 1.0000 100 chrXV:1003938-1004888 1.0000 100 chrXV:1025692-1026082 1.0000 100 chrXV:1027879-1029297 1.0000 100 chrXV:1070869-1071158 1.0000 100 chrXV:1091107-1091291 1.0000 100 chrXVI:55837-56497 1.0000 100 chrXVI:75458-76915 1.0000 100 chrXVI:134770-135866 1.0000 100 chrXVI:172717-174120 1.0000 100 chrXVI:188562-188968 1.0000 100 chrXVI:193518-194620 1.0000 100 chrXVI:209979-210497 1.0000 100 chrXVI:279965-280229 1.0000 100 chrXVI:280669-282928 1.0000 100 chrXVI:302470-304321 1.0000 100 chrXVI:338746-339114 1.0000 100 chrXVI:378646-379022 1.0000 100 chrXVI:404559-406037 1.0000 100 chrXVI:406205-407751 1.0000 100 chrXVI:435669-436204 1.0000 100 chrXVI:520141-520527 1.0000 100 chrXVI:560004-560504 1.0000 100 chrXVI:572045-572571 1.0000 100 chrXVI:575195-575555 1.0000 100 chrXVI:581811-582393 1.0000 100 chrXVI:622288-622861 1.0000 100 chrXVI:689357-689862 1.0000 100 chrXVI:699885-700706 1.0000 100 chrXVI:718432-719437 1.0000 100 chrXVI:731590-732296 1.0000 100 chrXVI:744058-744603 1.0000 100 chrXVI:768994-769511 1.0000 100 chrXVI:775627-776097 1.0000 100 chrXVI:794251-795988 1.0000 100 chrXVI:810429-811079 1.0000 100 chrXVI:819330-819748 1.0000 100 chrXVI:856758-857121 1.0000 100 chrXVI:860133-860648 1.0000 100 chrXVI:866456-866882 1.0000 100 chrXVI:880033-880588 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--INO80/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--INO80/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--INO80/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 520 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 52000 N= 520 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.291 C 0.209 G 0.209 T 0.291 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--INO80/background): A 0.311 C 0.189 G 0.189 T 0.311 ******************************************************************************** ******************************************************************************** MOTIF BSGGRATCGAACCSVKGAYCT MEME-1 width = 21 sites = 135 llr = 2275 E-value = 5.6e-493 ******************************************************************************** -------------------------------------------------------------------------------- Motif BSGGRATCGAACCSVKGAYCT MEME-1 Description -------------------------------------------------------------------------------- Simplified A :13:65:::aa::13127::: pos.-specific C 44:::2:7:::a7532:1672 probability G 357a42::a::::34481111 matrix T 2::::1a3::::21:3:2416 bits 2.4 * * * 2.2 * * * 1.9 * * * 1.7 * * **** Relative 1.4 * ****** * Entropy 1.2 * ******* * (24.3 bits) 1.0 *** ******* * ** 0.7 ***** ******** * ** 0.5 ***** *************** 0.2 ********************* 0.0 --------------------- Multilevel CGGGAATCGAACCCGGGACCT consensus GCA GG T TGCTA T C sequence T AC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BSGGRATCGAACCSVKGAYCT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrIII:123366-123818 + 44 5.04e-13 TGGGGCGAGC CGGGACTCGAACCCGGGACCT CCCGCACCCT chrXV:853901-854434 + 79 4.27e-11 TTGGACGCAA CCGGAATCGAACCGATGACCT C chrXII:214688-215163 + 17 4.27e-11 ATGGACGCAA CCGGAATCGAACCGATGACCT CTTCCTTGCA chrV:311775-312310 + 40 4.27e-11 TTGGACGCAA CCGGAATCGAACCGATGACCT CTTCCTTGCA chrI:166030-166557 - 67 4.27e-11 TTGGACGCAA CCGGAATCGAACCGATGACCT CTTCCTTGCA chrXVI:860133-860648 - 80 5.21e-11 . CCGGAATCGAACCGGGGGCCC AACGATGGCA chrXVI:572045-572571 - 52 5.21e-11 TTGCGCAAGC CCGGAATCGAACCGGGGGCCC AACGATGGCA chrXV:281958-282419 - 67 5.21e-11 ATGCGCAAGC CCGGAATCGAACCGGGGGCCC AACGATGGCA chrX:531547-532168 - 62 5.21e-11 CTGCGCAAGC CCGGAATCGAACCGGGGGCCC AACGATGGCA chrX:396431-397042 + 49 5.21e-11 ATGCGCAAGC CCGGAATCGAACCGGGGGCCC AACGATGGCA chrVII:930642-931252 + 65 5.21e-11 ATGCGCAAGC CCGGAATCGAACCGGGGGCCC AACGATGGCA chrVI:180689-181258 + 60 5.21e-11 CTGCGCAAGC CCGGAATCGAACCGGGGGCCC AACGATGGCA chrVIII:475467-475919 + 72 9.07e-11 ATGTTCCAAC CGAGGATCGAACTCGGGACCT TTGCCGTG chrIV:1075286-1075775 + 1 9.07e-11 . CGAGGATCGAACTCGGGACCT TTGCCGTGTG chrXVI:856758-857121 - 56 1.08e-10 ATGGACGAGT CCGGAATCGAACCGGAGACCT CTCCCATGCT chrXIII:768188-768662 + 3 1.08e-10 GT CCGGAATCGAACCGGAGACCT CTCCCATGCT chrXIII:320922-321330 + 80 1.08e-10 ATGGACGAGT CCGGAATCGAACCGGAGACCT chrXII:656687-657212 + 44 1.08e-10 TTGGACGAGT CCGGAATCGAACCGGAGACCT CTCCCATGCT chrXI:517774-518232 - 78 1.08e-10 GT CCGGAATCGAACCGGAGACCT CTCCCATGCT chrX:197131-197598 + 8 1.08e-10 GACGAGT CCGGAATCGAACCGGAGACCT CTCCCATGCT chrVII:774110-774651 - 62 1.08e-10 TTGGACGAGT CCGGAATCGAACCGGAGACCT CTCCCATGCT chrVI:204741-205215 + 5 1.08e-10 GAGT CCGGAATCGAACCGGAGACCT CTCCCATGCT chrIV:410157-410701 - 43 1.08e-10 TTGGACGAGT CCGGAATCGAACCGGAGACCT CTCCCATGCT chrXVI:880033-880588 + 45 1.82e-10 ATGGTCTCTA GCGGGATCGAACCGCTGATCC CCGCGTTATT chrXIV:602126-602534 - 76 1.82e-10 TCTA GCGGGATCGAACCGCTGATCC CCGCGTTATT chrXIV:569708-570139 + 3 1.82e-10 TA GCGGGATCGAACCGCTGATCC CCGCGTTATT chrXII:1051838-1052402 + 10 1.82e-10 TGGTCTCTA GCGGGATCGAACCGCTGATCC CCGCGTTATT chrVII:738890-739457 - 43 1.82e-10 ATGGTCTCTA GCGGGATCGAACCGCTGATCC CCGCGTTATT chrIX:210504-210916 - 49 1.82e-10 ATGGTCTCTA GCGGGATCGAACCGCTGATCC CCGCGTTATT chrIV:667769-668279 + 42 1.82e-10 ATGGTCTCTA GCGGGATCGAACCGCTGATCC CCGCGTTATT chrII:197228-197899 - 25 1.82e-10 ATGGTCTCTA GCGGGATCGAACCGCTGATCC CCGCGTTATT chrXVI:581811-582393 - 53 2.15e-10 AAGCCCTGTA GGGGGCTCGAACCCCTAACCT TATGATTAAG chrXIII:480391-480925 + 22 2.15e-10 AAGCCCTGTA GGGGGCTCGAACCCCTAACCT TATGATTAAG chrXI:202813-203307 - 32 2.15e-10 AAGCCCTGTA GGGGGCTCGAACCCCTAACCT TATGATTAAG chrX:414724-415292 - 51 2.15e-10 TAGCCCTGTA GGGGGCTCGAACCCCTAACCT TATGATTAAG chrVII:122046-122538 - 70 2.15e-10 TAGCCCTGTA GGGGGCTCGAACCCCTAACCT TATGATTAAG chrVI:226535-226951 + 4 2.15e-10 GTA GGGGGCTCGAACCCCTAACCT TATGATTAAG chrV:135147-135691 + 65 2.15e-10 AAGCCCTGTA GGGGGCTCGAACCCCTAACCT TATGATTAAG chrIX:300001-300512 + 31 2.15e-10 TAGCCCTGTA GGGGGCTCGAACCCCTAACCT TATGATTAAG chrIV:1352272-1352749 + 15 2.15e-10 TAGCCCTGTA GGGGGCTCGAACCCCTAACCT TATGATTAAG chrIV:1201524-1202055 - 54 2.15e-10 TAGCCCTGTA GGGGGCTCGAACCCCTAACCT TATGATTAAG chrXIV:96035-96553 + 6 4.75e-10 CGGTA CGAGAATCGAACCCGTGTCCC CACCTTGGAA chrVII:779372-779896 - 74 4.75e-10 GCGGTA CGAGAATCGAACCCGTGTCCC CACCTTGGAA chrXVI:209979-210497 + 13 8.58e-10 ACTCCGATAC GGGGAGTCGAACCCCGGTCTC CACGGTGAAA chrX:115710-116204 + 41 8.58e-10 ACTCCGATAC GGGGAGTCGAACCCCGGTCTC CACGGTGAAA chrVII:541614-542217 - 27 8.58e-10 ACTCCGATAC GGGGAGTCGAACCCCGGTCTC CACGGTGAAA chrVII:328351-328912 - 44 8.58e-10 ACTCCGATAC GGGGAGTCGAACCCCGGTCTC CACGGTGAAA chrV:354679-355371 - 1 8.58e-10 ACTCCGATAC GGGGAGTCGAACCCCGGTCTC chrIV:1016961-1017507 + 32 8.58e-10 ACTCCGAAGC GGGGAGTCGAACCCCGGTCTC CACGGTGAGA chrII:644960-645414 - 72 8.58e-10 TCCGATAC GGGGAGTCGAACCCCGGTCTC CACGGTGAAA chrXV:980480-981014 - 61 1.31e-09 AGGGGCGAGC TGGGAATTGAACCCAGGGCCT CTCGCATGCT chrXIV:567866-568540 - 35 1.31e-09 AGGGGCGAGC TGGGAATTGAACCCAGGGCCT CTCGCATGCT chrXIV:546939-547408 - 44 1.31e-09 CGGGGCGAGC TGGGAATTGAACCCAGGGCCT CTCGCATGCT chrXII:92294-92927 - 61 1.31e-09 AGGGGCGAGC TGGGAATTGAACCCAGGGCCT CTCGCATGCT chrVIII:388662-389226 + 8 1.31e-09 GGCGAGC TGGGAATTGAACCCAGGGCCT CTCGCATGCT chrXV:663479-664108 + 78 1.96e-09 ACGATTTCGC CCAGGATCGAACTGGGGACGT TC chrXIII:586414-586930 + 23 1.96e-09 ATGATTTCGC CCAGGATCGAACTGGGGACGT TCTGCGTGTT chrXIII:420309-420853 + 66 1.96e-09 ATGATTTCGC CCAGGATCGAACTGGGGACGT TCTGCGTGTT chrXIII:372204-372719 + 43 1.96e-09 ATGATTTCGC CCAGGATCGAACTGGGGACGT TCTGCGTGTT chrXII:687673-688146 + 9 1.96e-09 GATTTCGC CCAGGATCGAACTGGGGACGT TCTGCGTGTT chrXI:307869-308427 + 55 1.96e-09 TTGATTTCGC CCAGGATCGAACTGGGGACGT TCTGCGTGTT chrVII:412086-412586 + 17 1.96e-09 TTGATTTCGC CCAGGATCGAACTGGGGACGT TCTGCGTGTT chrV:438481-438986 - 61 1.96e-09 TTGATTTCGC CCAGGATCGAACTGGGGACGT TCTGCGTGTT chrXVI:768994-769511 + 14 2.54e-09 ACTCCTCATA GGGGGCTCGAACCCCTGACAT TTCGGTATCC chrXV:438439-438966 - 57 2.54e-09 ACTCCTCATA GGGGGCTCGAACCCCTGACAT TTCGGTATCC chrXII:875196-875665 - 62 2.54e-09 ACTCCTCATA GGGGGCTCGAACCCCTGACAT TTCGGTATCC chrXI:578776-579297 - 45 2.54e-09 ACTCCTCATA GGGGGCTCGAACCCCTGACAT TTCGGTATCC chrXI:46440-47021 + 64 2.89e-09 ATGCCCTCTG TGGGAATTGAACCCACGATCC CCGCATTACG chrIV:488406-489158 + 74 2.89e-09 CTGATCCAAC CGAGGTTCGAACTCGGGATCT TCGCCG chrII:326569-327119 + 7 2.89e-09 TCCAAC CGAGGTTCGAACTCGGGATCT TCGCCGTGTA chrXI:162278-162773 + 21 3.71e-09 ACACTCACGA TGGGGGTCGAACCCATAATCT TCTGATTAGA chrX:374214-374827 + 45 3.71e-09 GCACTCACGA TGGGGGTCGAACCCATAATCT TCTGATTAGA chrX:355123-355727 - 41 3.71e-09 GCACTCACGA TGGGGGTCGAACCCATAATCT TCTGATTAGA chrVII:828458-829036 + 35 3.71e-09 GCACTCACGA TGGGGGTCGAACCCATAATCT TCTGATTAGA chrVII:736186-736571 - 54 3.71e-09 ACACTCACGA TGGGGGTCGAACCCATAATCT TCTGATTAGA chrVII:405265-405768 - 46 3.71e-09 GCACTCACGA TGGGGGTCGAACCCATAATCT TCTGATTAGA chrII:405596-406299 - 23 3.71e-09 GCACTCACGA TGGGGGTCGAACCCATAATCT TCTGATTAGA chrV:130845-131385 + 26 4.19e-09 TAGGTCTTAC CCGGATTCGAACCGGGGTTGT TCGGATCAAA chrIV:802571-803001 + 4 4.19e-09 TAC CCGGATTCGAACCGGGGTTGT CCGGATCAAA chrIV:644958-645389 + 39 4.19e-09 AAGGTCCTAC CCGGATTCGAACCGGGGTTGT CCGGATCAAA chrIV:520722-521294 - 56 4.19e-09 AAGGTCCTAC CCGGATTCGAACCGGGGTTGT CCGGATCAAA chrXIV:104577-105110 - 55 2.43e-08 ATGCTTCCAA TCGGATTTGAACCGATGATCT CCACATTACT chrIX:325501-326063 - 59 2.43e-08 TTGCTTCCAA TCGGATTTGAACCGATGATCT CCACATTACT chrIX:174827-175298 - 62 2.43e-08 TTGCTTCCAA TCGGATTTGAACCGATGATCT CCACATTACT chrIV:434017-434541 + 44 2.43e-08 ATGCTTCCAA TCGGATTTGAACCGATGATCT CCACATTACT chrXV:571730-572322 - 24 3.26e-08 TCTCCGCGAC GGGGAATTGAACCCCGATCTG GCACGCGACA chrXIII:463281-463886 - 63 3.26e-08 TCTCCGCGAC GGGGAATTGAACCCCGATCTG GCACGCGACA chrXII:426880-427464 - 52 3.26e-08 TCTCCGCGAC GGGGAATTGAACCCCGATCTG GCACGCGACA chrXI:513145-513609 + 14 3.26e-08 TCTCCGCGAC GGGGAATTGAACCCCGATCTG GCACGCGACA chrX:541282-541818 - 50 3.26e-08 TCTCCGCGAC GGGGAATTGAACCCCGATCTG GCACGCGACA chrVII:544301-544893 + 39 3.26e-08 TCTCCGCGAC GGGGAATTGAACCCCGATCTG GCACGCGACA chrIX:336116-336685 + 8 3.26e-08 CCGCGAC GGGGAATTGAACCCCGATCTG GCACGCGACA chrIV:568686-569296 - 65 3.26e-08 TCTCCGCGAC GGGGAATTGAACCCCGATCTG GCACGCGACA chrVIII:466728-467364 - 36 3.58e-08 ATGCCACCTG CCAGAATTGAACTAGCGACCT TTGCATTACA chrXVI:810429-811079 - 16 5.66e-08 ACGACCCCAG TGAGGGTTGAACTCACGATCT TGCGATTAAC chrXVI:55837-56497 + 61 5.66e-08 TTGAAACGGA CAGGAATTGAACCTGCAACCC TTCGATTGCA chrXV:288008-288436 - 79 5.66e-08 G GGCGAGTCGAACGCCCGATCT CAAGATTTCG chrXV:228127-228592 - 66 5.66e-08 ACGACCCCAG TGAGGGTTGAACTCACGATCT TGCGATTAAC chrXIV:632391-632898 - 49 5.66e-08 ACGACCCCAG TGAGGGTTGAACTCACGATCT TGCGATTAAC chrXIV:102493-103105 - 11 5.66e-08 ACGACCCCAG TGAGGGTTGAACTCACGATCT TGCGATTAAC chrXIII:837710-838251 - 57 5.66e-08 ATCTCCCGGG GGCGAGTCGAACGCCCGATCT CAAGATTTCG chrXII:975782-976282 + 10 5.66e-08 CGACCCCAG TGAGGGTTGAACTCACGATCT TGCGATTAAC chrXI:74389-74926 - 61 5.66e-08 GCGACCCCAG TGAGGGTTGAACTCACGATCT TGCGATTAAC chrX:415714-416265 + 1 5.66e-08 . CAGGAATTGAACCTGCAACCC TTCGATTGCA chrX:354012-354564 - 65 5.66e-08 ATCTCCCGGG GGCGAGTCGAACGCCCGATCT CAAGATTTCG chrVII:730902-731440 - 60 5.66e-08 ACGACCCCAG TGAGGGTTGAACTCACGATCT TGCGATTAAC chrVII:287050-287740 + 14 5.66e-08 ATGAAACGGA CAGGAATTGAACCTGCAACCC TTCGATTGCA chrVI:210424-210893 + 20 5.66e-08 ATCTCCCGGG GGCGAGTCGAACGCCCGATCT CAAGATTTCG chrVI:137241-137806 + 22 5.66e-08 ACGACCCCAG TGAGGGTTGAACTCACGATCT TGCGATTAAC chrIV:946129-946625 - 44 5.66e-08 ATCTCCCGGG GGCGAGTCGAACGCCCGATCT CAAGATTTCG chrXVI:622288-622861 + 25 7.34e-08 ATGCGAATTC TGTGGATCGAACACAGGACCT CCAGATAACT chrXVI:560004-560504 + 3 7.34e-08 TC TGTGGATCGAACACAGGACCT CCAGATAACT chrVIII:358282-358789 + 2 7.34e-08 C TGTGGATCGAACACAGGACCT CCAGATAACT chrIV:1095107-1095700 + 26 7.34e-08 ATGCGAACTC TGTGGATCGAACACAGGACCT CCAGATATCT chrXV:340127-340582 + 4 7.99e-08 CGC CAGGACTTGAACCTGGAATCT TCTGGTTCGT chrXII:374182-374709 - 3 7.99e-08 TCTTCCCCGC CAGGACTTGAACCTGGAATCT TC chrV:492187-492571 + 32 7.99e-08 CCTTCCCCGC CAGGACTTGAACCTGGAATCT TCTGGTTCGT chrIV:619688-620243 + 63 7.99e-08 TCTTCCCCGC CAGGACTTGAACCTGGAATCT TCTGGTTCGT chrXVI:744058-744603 - 46 1.64e-07 TTGCCACCTG TCAGAATTGAACTAACGACCT TTGCATTACA chrX:422708-423236 - 58 1.64e-07 GTGCTCCAGG GGAGGTTCGAACTCTCGACCT TCAGATTATG chrXVI:435669-436204 + 16 2.36e-07 AAGCTCGCAC TCAGGATCGAACTAAGGACCA ACAGATTTGC chrVII:706903-707357 + 37 2.36e-07 AAGCTCGCAC TCAGGATCGAACTAAGGACCA ACAGATTTGC chrXIII:362886-363331 - 48 4.05e-07 ATGCCATCTC CTAGAATCGAACCAGGGTTTC ATCGGCCACA chrXI:313195-313673 + 26 4.05e-07 ATGCCATCTC CTAGAATCGAACCAGGGTTTC ATCGGCCACA chrVII:319578-320125 - 22 4.05e-07 ATGCCATCTC CTAGAATCGAACCAGGGTTTC ATCGGCCACA chrV:434380-434786 + 17 4.05e-07 ATGCCATCTC CTAGAATCGAACCAGGGTTTC ATCGGCCACA chrV:207117-207686 - 48 4.05e-07 ATGCCATCTC CTAGAATCGAACCAGGGTTTC ATCGGCCACA chrXIII:258963-259433 + 19 6.97e-07 ACGACAACTG CAGGACTCGAACCTGCGCGGG CAAAGCCCAA chrIV:980745-981282 + 20 6.97e-07 ACGACAACTG CAGGACTCGAACCTGCGCGGG CAAAGCCCAA chrII:226855-227354 - 73 6.97e-07 ACAACTG CAGGACTCGAACCTGCGCGGG CAAAGCCCAA chrI:182348-182806 + 4 6.97e-07 CTG CAGGACTCGAACCTGCGCGGG CAAAGCCCAA chrII:347377-347880 - 79 1.30e-06 G CGAGGTTCGAACTCGCGCGGA CAACCGTCCA chrII:9355-9984 - 18 1.30e-06 CTGAAGGATG CGAGGTTCGAACTCGCGCGGA CAACCGTCCA chrXVI:689357-689862 - 58 1.96e-06 ACGACACCAG CAGGATTTGAACCAGCGCGGG CAGAGCCCAA chrV:288181-288736 + 44 1.96e-06 ACGACACCAG CAGGATTTGAACCAGCGCGGG CAGAGCCCAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BSGGRATCGAACCSVKGAYCT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:123366-123818 5e-13 43_[+1]_36 chrXV:853901-854434 4.3e-11 78_[+1]_1 chrXII:214688-215163 4.3e-11 16_[+1]_63 chrV:311775-312310 4.3e-11 39_[+1]_40 chrI:166030-166557 4.3e-11 66_[-1]_13 chrXVI:860133-860648 5.2e-11 79_[-1] chrXVI:572045-572571 5.2e-11 51_[-1]_28 chrXV:281958-282419 5.2e-11 66_[-1]_13 chrX:531547-532168 5.2e-11 61_[-1]_18 chrX:396431-397042 5.2e-11 48_[+1]_31 chrVII:930642-931252 5.2e-11 64_[+1]_15 chrVI:180689-181258 5.2e-11 59_[+1]_20 chrVIII:475467-475919 9.1e-11 71_[+1]_8 chrIV:1075286-1075775 9.1e-11 [+1]_79 chrXVI:856758-857121 1.1e-10 55_[-1]_24 chrXIII:768188-768662 1.1e-10 2_[+1]_77 chrXIII:320922-321330 1.1e-10 79_[+1] chrXII:656687-657212 1.1e-10 43_[+1]_36 chrXI:517774-518232 1.1e-10 77_[-1]_2 chrX:197131-197598 1.1e-10 7_[+1]_72 chrVII:774110-774651 1.1e-10 61_[-1]_18 chrVI:204741-205215 1.1e-10 4_[+1]_75 chrIV:410157-410701 1.1e-10 42_[-1]_37 chrXVI:880033-880588 1.8e-10 44_[+1]_35 chrXIV:602126-602534 1.8e-10 75_[-1]_4 chrXIV:569708-570139 1.8e-10 2_[+1]_77 chrXII:1051838-1052402 1.8e-10 9_[+1]_70 chrVII:738890-739457 1.8e-10 42_[-1]_37 chrIX:210504-210916 1.8e-10 48_[-1]_31 chrIV:667769-668279 1.8e-10 41_[+1]_38 chrII:197228-197899 1.8e-10 24_[-1]_55 chrXVI:581811-582393 2.1e-10 52_[-1]_27 chrXIII:480391-480925 2.1e-10 21_[+1]_58 chrXI:202813-203307 2.1e-10 31_[-1]_48 chrX:414724-415292 2.1e-10 50_[-1]_29 chrVII:122046-122538 2.1e-10 69_[-1]_10 chrVI:226535-226951 2.1e-10 3_[+1]_76 chrV:135147-135691 2.1e-10 64_[+1]_15 chrIX:300001-300512 2.1e-10 30_[+1]_49 chrIV:1352272-1352749 2.1e-10 14_[+1]_65 chrIV:1201524-1202055 2.1e-10 53_[-1]_26 chrXIV:96035-96553 4.7e-10 5_[+1]_74 chrVII:779372-779896 4.7e-10 73_[-1]_6 chrXVI:209979-210497 8.6e-10 12_[+1]_67 chrX:115710-116204 8.6e-10 40_[+1]_39 chrVII:541614-542217 8.6e-10 26_[-1]_53 chrVII:328351-328912 8.6e-10 43_[-1]_36 chrV:354679-355371 8.6e-10 [-1]_79 chrIV:1016961-1017507 8.6e-10 31_[+1]_48 chrII:644960-645414 8.6e-10 71_[-1]_8 chrXV:980480-981014 1.3e-09 60_[-1]_19 chrXIV:567866-568540 1.3e-09 34_[-1]_45 chrXIV:546939-547408 1.3e-09 43_[-1]_36 chrXII:92294-92927 1.3e-09 60_[-1]_19 chrVIII:388662-389226 1.3e-09 7_[+1]_72 chrXV:663479-664108 2e-09 77_[+1]_2 chrXIII:586414-586930 2e-09 22_[+1]_57 chrXIII:420309-420853 2e-09 65_[+1]_14 chrXIII:372204-372719 2e-09 42_[+1]_37 chrXII:687673-688146 2e-09 8_[+1]_71 chrXI:307869-308427 2e-09 54_[+1]_25 chrVII:412086-412586 2e-09 16_[+1]_63 chrV:438481-438986 2e-09 60_[-1]_19 chrXVI:768994-769511 2.5e-09 13_[+1]_66 chrXV:438439-438966 2.5e-09 56_[-1]_23 chrXII:875196-875665 2.5e-09 61_[-1]_18 chrXI:578776-579297 2.5e-09 44_[-1]_35 chrXI:46440-47021 2.9e-09 63_[+1]_16 chrIV:488406-489158 2.9e-09 73_[+1]_6 chrII:326569-327119 2.9e-09 6_[+1]_73 chrXI:162278-162773 3.7e-09 20_[+1]_59 chrX:374214-374827 3.7e-09 44_[+1]_35 chrX:355123-355727 3.7e-09 40_[-1]_39 chrVII:828458-829036 3.7e-09 34_[+1]_45 chrVII:736186-736571 3.7e-09 53_[-1]_26 chrVII:405265-405768 3.7e-09 45_[-1]_34 chrII:405596-406299 3.7e-09 22_[-1]_57 chrV:130845-131385 4.2e-09 25_[+1]_54 chrIV:802571-803001 4.2e-09 3_[+1]_76 chrIV:644958-645389 4.2e-09 38_[+1]_41 chrIV:520722-521294 4.2e-09 55_[-1]_24 chrXIV:104577-105110 2.4e-08 54_[-1]_25 chrIX:325501-326063 2.4e-08 58_[-1]_21 chrIX:174827-175298 2.4e-08 61_[-1]_18 chrIV:434017-434541 2.4e-08 43_[+1]_36 chrXV:571730-572322 3.3e-08 23_[-1]_56 chrXIII:463281-463886 3.3e-08 62_[-1]_17 chrXII:426880-427464 3.3e-08 51_[-1]_28 chrXI:513145-513609 3.3e-08 13_[+1]_66 chrX:541282-541818 3.3e-08 49_[-1]_30 chrVII:544301-544893 3.3e-08 38_[+1]_41 chrIX:336116-336685 3.3e-08 7_[+1]_72 chrIV:568686-569296 3.3e-08 64_[-1]_15 chrVIII:466728-467364 3.6e-08 35_[-1]_44 chrXVI:810429-811079 5.7e-08 15_[-1]_64 chrXVI:55837-56497 5.7e-08 60_[+1]_19 chrXV:288008-288436 5.7e-08 78_[-1]_1 chrXV:228127-228592 5.7e-08 65_[-1]_14 chrXIV:632391-632898 5.7e-08 48_[-1]_31 chrXIV:102493-103105 5.7e-08 10_[-1]_69 chrXIII:837710-838251 5.7e-08 56_[-1]_23 chrXII:975782-976282 5.7e-08 9_[+1]_70 chrXI:74389-74926 5.7e-08 60_[-1]_19 chrX:415714-416265 5.7e-08 [+1]_79 chrX:354012-354564 5.7e-08 64_[-1]_15 chrVII:730902-731440 5.7e-08 59_[-1]_20 chrVII:287050-287740 5.7e-08 13_[+1]_66 chrVI:210424-210893 5.7e-08 19_[+1]_60 chrVI:137241-137806 5.7e-08 21_[+1]_58 chrIV:946129-946625 5.7e-08 43_[-1]_36 chrXVI:622288-622861 7.3e-08 24_[+1]_55 chrXVI:560004-560504 7.3e-08 2_[+1]_77 chrVIII:358282-358789 7.3e-08 1_[+1]_78 chrIV:1095107-1095700 7.3e-08 25_[+1]_54 chrXV:340127-340582 8e-08 3_[+1]_76 chrXII:374182-374709 8e-08 2_[-1]_77 chrV:492187-492571 8e-08 31_[+1]_48 chrIV:619688-620243 8e-08 62_[+1]_17 chrXVI:744058-744603 1.6e-07 45_[-1]_34 chrX:422708-423236 1.6e-07 57_[-1]_22 chrXVI:435669-436204 2.4e-07 15_[+1]_64 chrVII:706903-707357 2.4e-07 36_[+1]_43 chrXIII:362886-363331 4.1e-07 47_[-1]_32 chrXI:313195-313673 4.1e-07 25_[+1]_54 chrVII:319578-320125 4.1e-07 21_[-1]_58 chrV:434380-434786 4.1e-07 16_[+1]_63 chrV:207117-207686 4.1e-07 47_[-1]_32 chrXIII:258963-259433 7e-07 18_[+1]_61 chrIV:980745-981282 7e-07 19_[+1]_60 chrII:226855-227354 7e-07 72_[-1]_7 chrI:182348-182806 7e-07 3_[+1]_76 chrII:347377-347880 1.3e-06 78_[-1]_1 chrII:9355-9984 1.3e-06 17_[-1]_62 chrXVI:689357-689862 2e-06 57_[-1]_22 chrV:288181-288736 2e-06 43_[+1]_36 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BSGGRATCGAACCSVKGAYCT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF BSGGRATCGAACCSVKGAYCT width=21 seqs=135 chrIII:123366-123818 ( 44) CGGGACTCGAACCCGGGACCT 1 chrXV:853901-854434 ( 79) CCGGAATCGAACCGATGACCT 1 chrXII:214688-215163 ( 17) CCGGAATCGAACCGATGACCT 1 chrV:311775-312310 ( 40) CCGGAATCGAACCGATGACCT 1 chrI:166030-166557 ( 67) CCGGAATCGAACCGATGACCT 1 chrXVI:860133-860648 ( 80) CCGGAATCGAACCGGGGGCCC 1 chrXVI:572045-572571 ( 52) CCGGAATCGAACCGGGGGCCC 1 chrXV:281958-282419 ( 67) CCGGAATCGAACCGGGGGCCC 1 chrX:531547-532168 ( 62) CCGGAATCGAACCGGGGGCCC 1 chrX:396431-397042 ( 49) CCGGAATCGAACCGGGGGCCC 1 chrVII:930642-931252 ( 65) CCGGAATCGAACCGGGGGCCC 1 chrVI:180689-181258 ( 60) CCGGAATCGAACCGGGGGCCC 1 chrVIII:475467-475919 ( 72) CGAGGATCGAACTCGGGACCT 1 chrIV:1075286-1075775 ( 1) CGAGGATCGAACTCGGGACCT 1 chrXVI:856758-857121 ( 56) CCGGAATCGAACCGGAGACCT 1 chrXIII:768188-768662 ( 3) CCGGAATCGAACCGGAGACCT 1 chrXIII:320922-321330 ( 80) CCGGAATCGAACCGGAGACCT 1 chrXII:656687-657212 ( 44) CCGGAATCGAACCGGAGACCT 1 chrXI:517774-518232 ( 78) CCGGAATCGAACCGGAGACCT 1 chrX:197131-197598 ( 8) CCGGAATCGAACCGGAGACCT 1 chrVII:774110-774651 ( 62) CCGGAATCGAACCGGAGACCT 1 chrVI:204741-205215 ( 5) CCGGAATCGAACCGGAGACCT 1 chrIV:410157-410701 ( 43) CCGGAATCGAACCGGAGACCT 1 chrXVI:880033-880588 ( 45) GCGGGATCGAACCGCTGATCC 1 chrXIV:602126-602534 ( 76) GCGGGATCGAACCGCTGATCC 1 chrXIV:569708-570139 ( 3) GCGGGATCGAACCGCTGATCC 1 chrXII:1051838-1052402 ( 10) GCGGGATCGAACCGCTGATCC 1 chrVII:738890-739457 ( 43) GCGGGATCGAACCGCTGATCC 1 chrIX:210504-210916 ( 49) GCGGGATCGAACCGCTGATCC 1 chrIV:667769-668279 ( 42) GCGGGATCGAACCGCTGATCC 1 chrII:197228-197899 ( 25) GCGGGATCGAACCGCTGATCC 1 chrXVI:581811-582393 ( 53) GGGGGCTCGAACCCCTAACCT 1 chrXIII:480391-480925 ( 22) GGGGGCTCGAACCCCTAACCT 1 chrXI:202813-203307 ( 32) GGGGGCTCGAACCCCTAACCT 1 chrX:414724-415292 ( 51) GGGGGCTCGAACCCCTAACCT 1 chrVII:122046-122538 ( 70) GGGGGCTCGAACCCCTAACCT 1 chrVI:226535-226951 ( 4) GGGGGCTCGAACCCCTAACCT 1 chrV:135147-135691 ( 65) GGGGGCTCGAACCCCTAACCT 1 chrIX:300001-300512 ( 31) GGGGGCTCGAACCCCTAACCT 1 chrIV:1352272-1352749 ( 15) GGGGGCTCGAACCCCTAACCT 1 chrIV:1201524-1202055 ( 54) GGGGGCTCGAACCCCTAACCT 1 chrXIV:96035-96553 ( 6) CGAGAATCGAACCCGTGTCCC 1 chrVII:779372-779896 ( 74) CGAGAATCGAACCCGTGTCCC 1 chrXVI:209979-210497 ( 13) GGGGAGTCGAACCCCGGTCTC 1 chrX:115710-116204 ( 41) GGGGAGTCGAACCCCGGTCTC 1 chrVII:541614-542217 ( 27) GGGGAGTCGAACCCCGGTCTC 1 chrVII:328351-328912 ( 44) GGGGAGTCGAACCCCGGTCTC 1 chrV:354679-355371 ( 1) GGGGAGTCGAACCCCGGTCTC 1 chrIV:1016961-1017507 ( 32) GGGGAGTCGAACCCCGGTCTC 1 chrII:644960-645414 ( 72) GGGGAGTCGAACCCCGGTCTC 1 chrXV:980480-981014 ( 61) TGGGAATTGAACCCAGGGCCT 1 chrXIV:567866-568540 ( 35) TGGGAATTGAACCCAGGGCCT 1 chrXIV:546939-547408 ( 44) TGGGAATTGAACCCAGGGCCT 1 chrXII:92294-92927 ( 61) TGGGAATTGAACCCAGGGCCT 1 chrVIII:388662-389226 ( 8) TGGGAATTGAACCCAGGGCCT 1 chrXV:663479-664108 ( 78) CCAGGATCGAACTGGGGACGT 1 chrXIII:586414-586930 ( 23) CCAGGATCGAACTGGGGACGT 1 chrXIII:420309-420853 ( 66) CCAGGATCGAACTGGGGACGT 1 chrXIII:372204-372719 ( 43) CCAGGATCGAACTGGGGACGT 1 chrXII:687673-688146 ( 9) CCAGGATCGAACTGGGGACGT 1 chrXI:307869-308427 ( 55) CCAGGATCGAACTGGGGACGT 1 chrVII:412086-412586 ( 17) CCAGGATCGAACTGGGGACGT 1 chrV:438481-438986 ( 61) CCAGGATCGAACTGGGGACGT 1 chrXVI:768994-769511 ( 14) GGGGGCTCGAACCCCTGACAT 1 chrXV:438439-438966 ( 57) GGGGGCTCGAACCCCTGACAT 1 chrXII:875196-875665 ( 62) GGGGGCTCGAACCCCTGACAT 1 chrXI:578776-579297 ( 45) GGGGGCTCGAACCCCTGACAT 1 chrXI:46440-47021 ( 64) TGGGAATTGAACCCACGATCC 1 chrIV:488406-489158 ( 74) CGAGGTTCGAACTCGGGATCT 1 chrII:326569-327119 ( 7) CGAGGTTCGAACTCGGGATCT 1 chrXI:162278-162773 ( 21) TGGGGGTCGAACCCATAATCT 1 chrX:374214-374827 ( 45) TGGGGGTCGAACCCATAATCT 1 chrX:355123-355727 ( 41) TGGGGGTCGAACCCATAATCT 1 chrVII:828458-829036 ( 35) TGGGGGTCGAACCCATAATCT 1 chrVII:736186-736571 ( 54) TGGGGGTCGAACCCATAATCT 1 chrVII:405265-405768 ( 46) TGGGGGTCGAACCCATAATCT 1 chrII:405596-406299 ( 23) TGGGGGTCGAACCCATAATCT 1 chrV:130845-131385 ( 26) CCGGATTCGAACCGGGGTTGT 1 chrIV:802571-803001 ( 4) CCGGATTCGAACCGGGGTTGT 1 chrIV:644958-645389 ( 39) CCGGATTCGAACCGGGGTTGT 1 chrIV:520722-521294 ( 56) CCGGATTCGAACCGGGGTTGT 1 chrXIV:104577-105110 ( 55) TCGGATTTGAACCGATGATCT 1 chrIX:325501-326063 ( 59) TCGGATTTGAACCGATGATCT 1 chrIX:174827-175298 ( 62) TCGGATTTGAACCGATGATCT 1 chrIV:434017-434541 ( 44) TCGGATTTGAACCGATGATCT 1 chrXV:571730-572322 ( 24) GGGGAATTGAACCCCGATCTG 1 chrXIII:463281-463886 ( 63) GGGGAATTGAACCCCGATCTG 1 chrXII:426880-427464 ( 52) GGGGAATTGAACCCCGATCTG 1 chrXI:513145-513609 ( 14) GGGGAATTGAACCCCGATCTG 1 chrX:541282-541818 ( 50) GGGGAATTGAACCCCGATCTG 1 chrVII:544301-544893 ( 39) GGGGAATTGAACCCCGATCTG 1 chrIX:336116-336685 ( 8) GGGGAATTGAACCCCGATCTG 1 chrIV:568686-569296 ( 65) GGGGAATTGAACCCCGATCTG 1 chrVIII:466728-467364 ( 36) CCAGAATTGAACTAGCGACCT 1 chrXVI:810429-811079 ( 16) TGAGGGTTGAACTCACGATCT 1 chrXVI:55837-56497 ( 61) CAGGAATTGAACCTGCAACCC 1 chrXV:288008-288436 ( 79) GGCGAGTCGAACGCCCGATCT 1 chrXV:228127-228592 ( 66) TGAGGGTTGAACTCACGATCT 1 chrXIV:632391-632898 ( 49) TGAGGGTTGAACTCACGATCT 1 chrXIV:102493-103105 ( 11) TGAGGGTTGAACTCACGATCT 1 chrXIII:837710-838251 ( 57) GGCGAGTCGAACGCCCGATCT 1 chrXII:975782-976282 ( 10) TGAGGGTTGAACTCACGATCT 1 chrXI:74389-74926 ( 61) TGAGGGTTGAACTCACGATCT 1 chrX:415714-416265 ( 1) CAGGAATTGAACCTGCAACCC 1 chrX:354012-354564 ( 65) GGCGAGTCGAACGCCCGATCT 1 chrVII:730902-731440 ( 60) TGAGGGTTGAACTCACGATCT 1 chrVII:287050-287740 ( 14) CAGGAATTGAACCTGCAACCC 1 chrVI:210424-210893 ( 20) GGCGAGTCGAACGCCCGATCT 1 chrVI:137241-137806 ( 22) TGAGGGTTGAACTCACGATCT 1 chrIV:946129-946625 ( 44) GGCGAGTCGAACGCCCGATCT 1 chrXVI:622288-622861 ( 25) TGTGGATCGAACACAGGACCT 1 chrXVI:560004-560504 ( 3) TGTGGATCGAACACAGGACCT 1 chrVIII:358282-358789 ( 2) TGTGGATCGAACACAGGACCT 1 chrIV:1095107-1095700 ( 26) TGTGGATCGAACACAGGACCT 1 chrXV:340127-340582 ( 4) CAGGACTTGAACCTGGAATCT 1 chrXII:374182-374709 ( 3) CAGGACTTGAACCTGGAATCT 1 chrV:492187-492571 ( 32) CAGGACTTGAACCTGGAATCT 1 chrIV:619688-620243 ( 63) CAGGACTTGAACCTGGAATCT 1 chrXVI:744058-744603 ( 46) TCAGAATTGAACTAACGACCT 1 chrX:422708-423236 ( 58) GGAGGTTCGAACTCTCGACCT 1 chrXVI:435669-436204 ( 16) TCAGGATCGAACTAAGGACCA 1 chrVII:706903-707357 ( 37) TCAGGATCGAACTAAGGACCA 1 chrXIII:362886-363331 ( 48) CTAGAATCGAACCAGGGTTTC 1 chrXI:313195-313673 ( 26) CTAGAATCGAACCAGGGTTTC 1 chrVII:319578-320125 ( 22) CTAGAATCGAACCAGGGTTTC 1 chrV:434380-434786 ( 17) CTAGAATCGAACCAGGGTTTC 1 chrV:207117-207686 ( 48) CTAGAATCGAACCAGGGTTTC 1 chrXIII:258963-259433 ( 19) CAGGACTCGAACCTGCGCGGG 1 chrIV:980745-981282 ( 20) CAGGACTCGAACCTGCGCGGG 1 chrII:226855-227354 ( 73) CAGGACTCGAACCTGCGCGGG 1 chrI:182348-182806 ( 4) CAGGACTCGAACCTGCGCGGG 1 chrII:347377-347880 ( 79) CGAGGTTCGAACTCGCGCGGA 1 chrII:9355-9984 ( 18) CGAGGTTCGAACTCGCGCGGA 1 chrXVI:689357-689862 ( 58) CAGGATTTGAACCAGCGCGGG 1 chrV:288181-288736 ( 44) CAGGATTTGAACCAGCGCGGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BSGGRATCGAACCSVKGAYCT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 41600 bayes= 9.05248 E= 5.6e-493 -1372 124 76 -39 -169 92 144 -307 -31 -235 185 -339 -1372 -1372 241 -1372 87 -1372 119 -1372 74 -15 9 -149 -1372 -1372 -1372 168 -1372 195 -1372 -18 -1372 -1372 241 -1372 168 -1372 -1372 -1372 168 -1372 -1372 -1372 -1372 241 -1372 -1372 -339 196 -235 -64 -193 144 79 -193 -22 72 114 -539 -222 14 121 -11 -39 -1372 202 -1372 108 -167 -108 -69 -1372 163 -167 19 -339 184 -35 -107 -339 37 -86 100 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BSGGRATCGAACCSVKGAYCT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 135 E= 5.6e-493 0.000000 0.444444 0.318519 0.237037 0.096296 0.355556 0.511111 0.037037 0.251852 0.037037 0.681481 0.029630 0.000000 0.000000 1.000000 0.000000 0.570370 0.000000 0.429630 0.000000 0.518519 0.170370 0.200000 0.111111 0.000000 0.000000 0.000000 1.000000 0.000000 0.725926 0.000000 0.274074 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.029630 0.733333 0.037037 0.200000 0.081481 0.511111 0.325926 0.081481 0.266667 0.311111 0.414815 0.007407 0.066667 0.207407 0.437037 0.288889 0.237037 0.000000 0.762963 0.000000 0.659259 0.059259 0.088889 0.192593 0.000000 0.585185 0.059259 0.355556 0.029630 0.674074 0.148148 0.148148 0.029630 0.244444 0.103704 0.622222 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BSGGRATCGAACCSVKGAYCT MEME-1 regular expression -------------------------------------------------------------------------------- [CGT][GC][GA]G[AG][AG]T[CT]GAAC[CT][CG][GCA][GTC][GA]A[CT]C[TC] -------------------------------------------------------------------------------- Time 260.93 secs. ******************************************************************************** ******************************************************************************** MOTIF GGCCBAGTBGKTWRAGSS MEME-2 width = 18 sites = 121 llr = 1824 E-value = 8.3e-348 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGCCBAGTBGKTWRAGSS MEME-2 Description -------------------------------------------------------------------------------- Simplified A 1:::1a1::::2665::: pos.-specific C ::864:::2::1::2:65 probability G 9a:22:9:4a61:42935 matrix T ::223::a3:464:111: bits 2.4 * * 2.2 * * 1.9 * * * 1.7 ** ** * * Relative 1.4 *** *** * * * Entropy 1.2 *** *** ** * * (21.7 bits) 1.0 **** *** ** *** 0.7 **** *** ** ** *** 0.5 **** ****** ** *** 0.2 ****************** 0.0 ------------------ Multilevel GGCCCAGTGGGTAAAGCG consensus TTT T T TGG GC sequence G C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCBAGTBGKTWRAGSS MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------ chrXVI:689357-689862 + 14 4.88e-10 TGGGCACTAT GGCCGAGTGGTTAAGGCG ACAGACTTGA chrXIII:258963-259433 - 66 4.88e-10 ATGGCAACTT GGCCGAGTGGTTAAGGCG AAAGATTAGA chrXII:784080-784595 + 75 4.88e-10 CCGTCCCAGT GGCCGAGTGGTTAAGGCG ATGCCTGC chrXII:167756-168268 - 38 4.88e-10 ATGGCAACTT GGCCGAGTGGTTAAGGCG AAAGATTAGA chrX:523857-524311 - 34 4.88e-10 AAGGCAACTT GGCCGAGTGGTTAAGGCG AAAGATTAGA chrVIII:132855-133334 - 38 4.88e-10 GTGGCAACTT GGCCGAGTGGTTAAGGCG AAAGATTAGA chrVI:191328-191822 - 63 4.88e-10 CTGTCCCAGT GGCCGAGTGGTTAAGGCG ATGCCCTGCT chrIV:1305408-1305897 + 36 4.88e-10 AAGGCAACTT GGCCGAGTGGTTAAGGCG AAAGATTAGA chrIV:1150654-1151188 - 45 4.88e-10 CAGTCCCAGT GGCCGAGTGGTTAAGGCG ATGCCTGCTA chrIV:980745-981282 - 67 4.88e-10 GAGGCAACTT GGCCGAGTGGTTAAGGCG AAAGATTAGA chrIV:437529-438003 + 64 4.88e-10 AAGGCAACTT GGCCGAGTGGTTAAGGCG AAAGATTAGA chrIII:227726-228218 + 28 4.88e-10 ATGGCACTAT GGCCGAGTGGTTAAGGCG AGAGACTCGA chrII:226855-227354 + 29 4.88e-10 GAGGCAACTT GGCCGAGTGGTTAAGGCG AAAGATTAGA chrI:182348-182806 - 51 4.88e-10 TTGGCAACTT GGCCGAGTGGTTAAGGCG AAAGATTAGA chrXVI:819330-819748 + 48 6.03e-10 ATGGTCTCTT GGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXIV:602126-602534 + 40 6.03e-10 ATGGTCTCTT GGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXIV:569708-570139 - 42 6.03e-10 GTGGTCTCTT GGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXII:1051838-1052402 - 49 6.03e-10 ATGGTCTCTT GGCCCAGTTGGTTAAGGC ACCGTGCTAA chrVII:738890-739457 + 7 6.03e-10 TCTCTT GGCCCAGTTGGTTAAGGC ACCGTGCTAA chrV:551115-551581 - 35 6.03e-10 CAGGTCTCTT GGCCCAGTTGGTTAAGGC ACCGTGCTAA chrV:443040-443504 - 28 6.03e-10 TTGGTCTCTT GGCCCAGTTGGTTAAGGC ACCGTGCTAA chrIX:210504-210916 + 13 6.03e-10 CTGGTCTCTT GGCCCAGTTGGTTAAGGC ACCGTGCTAA chrIX:183281-183723 - 36 6.03e-10 CTGGTCTCTT GGCCCAGTTGGTTAAGGC ACCGTGCTAA chrIV:667769-668279 - 81 6.03e-10 TT GGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXII:731879-732335 + 41 1.36e-09 ATGGGAGTTT GGCCGAGTGGTTTAAGGC GTCAGATTTA chrX:617711-618188 + 28 1.36e-09 ATGGGAGTTT GGCCGAGTGGTTTAAGGC GTCAGATTTA chrXII:214688-215163 - 55 1.94e-09 TAGGGCACAT GGCGCAGTTGGTAGCGCG CTTCCCTTGC chrVII:794170-794622 + 79 1.94e-09 GCGGGCACAT GGCGCAGTTGGTAGCGCG CTTC chrV:311775-312310 - 78 1.94e-09 CACAT GGCGCAGTTGGTAGCGCG CTTCCCTTGC chrI:166030-166557 + 32 1.94e-09 TTGGGCACAT GGCGCAGTTGGTAGCGCG CTTCCCTTGC chrXIV:104577-105110 + 20 4.49e-09 GAGCTTCTAT GGCCAAGTTGGTAAGGCG CCACACTAGT chrVIII:115921-116441 - 23 4.49e-09 GAGCTTCTAT GGCCAAGTTGGTAAGGCG CCACACTAGT chrIX:325501-326063 + 24 4.49e-09 GAGCTTCTAT GGCCAAGTTGGTAAGGCG CCACACTAGT chrIX:174827-175298 + 27 4.49e-09 GAGCTTCTAT GGCCAAGTTGGTAAGGCG CCACACTAGT chrII:266116-266643 + 57 4.49e-09 CTGCTTCTAT GGCCAAGTTGGTAAGGCG CCACACTAGT chrXVI:856758-857121 + 21 5.27e-09 TCGGGCGTGT GGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXIII:768188-768662 - 41 5.27e-09 ATGGGCGTGT GGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXI:517774-518232 + 43 5.27e-09 ATGGGCGTGT GGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXI:219678-220095 + 67 5.27e-09 TAGGGCGTGT GGCGTAGTCGGTAGCGCG CTCCCTTAGC chrX:197131-197598 - 46 5.27e-09 TAGGGCGTGT GGCGTAGTCGGTAGCGCG CTCCCTTAGC chrVII:774110-774651 + 27 5.27e-09 TTGGGCGTGT GGCGTAGTCGGTAGCGCG CTCCCTTAGC chrVI:204741-205215 - 43 5.27e-09 TCGGGCGTGT GGCGTAGTCGGTAGCGCG CTCCCTTAGC chrIV:410157-410701 + 8 5.27e-09 GGCGTGT GGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXIV:725986-726424 - 37 6.14e-09 TTGGAGGGTT GGCCGAGTGGTCTAAGGC GGCAGACTTA chrXII:962809-963342 - 5 6.14e-09 ACGGAGGGTT GGCCGAGTGGTCTAAGGC GGCA chrXI:83951-84476 + 53 6.14e-09 ATGGAGGGTT GGCCGAGTGGTCTAAGGC GGCAGACTTA chrX:424264-424721 - 48 6.14e-09 ATGGAGGGTT GGCCGAGTGGTCTAAGGC GGCAGACTTA chrIV:519545-519966 + 46 6.14e-09 ACGGAGGGTT GGCCGAGTGGTCTAAGGC GGCAGACTTA chrII:347377-347880 + 33 6.14e-09 ACGGAGGGTT GGCCGAGTGGTCTAAGGC GGCAGACTTA chrXV:487212-487686 + 48 9.49e-09 TAGACTCCAT GGCCAAGTTGGTTAAGGC GTGCGACTGT chrXV:228127-228592 + 30 9.49e-09 TAGACTCCAT GGCCAAGTTGGTTAAGGC GTGCGACTGT chrXIV:632391-632898 + 13 9.49e-09 GTGACTCCAT GGCCAAGTTGGTTAAGGC GTGCGACTGT chrXII:975782-976282 - 49 9.49e-09 AAGACTCCAT GGCCAAGTTGGTTAAGGC GTGCGACTGT chrXI:74389-74926 + 25 9.49e-09 TAGACTCCAT GGCCAAGTTGGTTAAGGC GTGCGACTGT chrVII:730902-731440 + 24 9.49e-09 AAGACTCCAT GGCCAAGTTGGTTAAGGC GTGCGACTGT chrVI:137241-137806 - 61 9.49e-09 CTGACTCCAT GGCCAAGTTGGTTAAGGC GTGCGACTGT chrIII:127502-127897 + 75 9.49e-09 ATGACTCCAT GGCCAAGTTGGTTAAGGC GTGCGACT chrXVI:768994-769511 - 75 3.04e-08 TCCTTGTT AGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXII:875196-875665 + 4 3.04e-08 GTT AGCTCAGTTGGTAGAGCG TTCGGCTTTT chrVII:115236-115803 + 27 3.04e-08 CATCCTTGTT AGCTCAGTTGGTAGAGCG TTCGGCTTTT chrIV:359333-359854 + 42 3.04e-08 CATCCTTGTT AGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXVI:581811-582393 + 18 4.30e-08 GAGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrXIII:480391-480925 - 60 4.30e-08 TAGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrX:414724-415292 + 16 4.30e-08 TAGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrVII:876032-876730 + 71 4.30e-08 TAGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrVII:122046-122538 + 35 4.30e-08 TAGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrVI:226535-226951 - 42 4.30e-08 ATGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrV:435583-436048 - 34 4.30e-08 GAGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrIX:300001-300512 - 69 4.30e-08 TAGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrIV:1352272-1352749 - 53 4.30e-08 TAGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrIV:1201524-1202055 + 19 4.30e-08 TAGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrXII:628154-628653 + 38 9.12e-08 GTGGTTGTTT GGCCGAGCGGTCTAAGGC GCCTGATTCA chrVII:857213-857660 - 80 9.12e-08 TTT GGCCGAGCGGTCTAAGGC GCCTGATTCA chrVII:422685-423497 + 59 9.12e-08 GTGGTTGTTT GGCCGAGCGGTCTAAGGC GCCTGATTCA chrVII:205308-205778 + 36 9.12e-08 GTGGTTGTTT GGCCGAGCGGTCTAAGGC GCCTGATTCA chrIV:1461500-1462065 - 72 9.12e-08 GTGGTTGTTT GGCCGAGCGGTCTAAGGC GCCTGATTCA chrI:180926-181455 + 9 9.12e-08 GGTTGTTT GGCCGAGCGGTCTAAGGC GCCTGATTCA chrXIII:586414-586930 - 62 1.35e-07 ATGGTTTCGT GGTCTAGTCGGTTATGGC ATCTGCTTAA chrXII:687673-688146 - 48 1.35e-07 TAGGTTTCGT GGTCTAGTCGGTTATGGC ATCTGCTTAA chrXI:379409-379920 + 74 1.35e-07 TAGGTTTCGT GGTCTAGTCGGTTATGGC ATCTGCTTA chrX:378136-378553 + 74 1.35e-07 TAGGTTTCGT GGTCTAGTCGGTTATGGC ATCTGCTTA chrVIII:85165-85564 - 32 1.35e-07 TTGGTTTCGT GGTCTAGTCGGTTATGGC ATCTGCTTAA chrVII:823266-823696 + 59 1.35e-07 GTGGTTTCGT GGTCTAGTCGGTTATGGC ATCTGCTTAA chrVII:412086-412586 - 56 1.35e-07 CTGGTTTCGT GGTCTAGTCGGTTATGGC ATCTGCTTAA chrV:469247-469661 + 61 1.35e-07 TTGGTTTCGT GGTCTAGTCGGTTATGGC ATCTGCTTAA chrV:438481-438986 + 25 1.35e-07 TAGGTTTCGT GGTCTAGTCGGTTATGGC ATCTGCTTAA chrXVI:560004-560504 - 60 1.79e-07 GAGCGGATTT AGCTCAGTTGGGAGAGCG CCAGACTGAA chrXIV:374676-375099 + 40 1.79e-07 AAGCGGACTT AGCTCAGTTGGGAGAGCG CCAGACTGAA chrXIII:352064-352520 + 46 1.79e-07 AAGCGGATTT AGCTCAGTTGGGAGAGCG CCAGACTGAA chrVIII:358282-358789 - 59 1.79e-07 AAGCGGATTT AGCTCAGTTGGGAGAGCG CCAGACTGAA chrVIII:237741-238144 - 22 1.79e-07 AAGCGGATTT AGCTCAGTTGGGAGAGCG CCAGACTGAA chrVI:157714-158261 - 45 1.79e-07 AAGCGGATTT AGCTCAGTTGGGAGAGCG CCAGACTGAA chrII:36154-36595 + 82 1.79e-07 AAGCGGATTT AGCTCAGTTGGGAGAGCG C chrXV:340127-340582 - 42 3.28e-07 TGTTCCTCGT GGCCCAATGGTCACGGCG TCTGGCTACG chrXI:490724-491237 + 46 3.28e-07 TGTTCCTCGT GGCCCAATGGTCACGGCG TCTGGCTACG chrX:233685-234205 + 52 3.28e-07 TGTTCCTCGT GGCCCAATGGTCACGGCG TCTGGCTACG chrV:492187-492571 - 70 3.28e-07 TATTCCTCGT GGCCCAATGGTCACGGCG TCTGGCTACG chrXV:976171-976677 + 55 6.13e-07 GCGCTTCAGT AGCTCAGTAGGAAGAGCG TCAGTCTCAT chrXIII:572689-573213 - 29 6.13e-07 CAGCTTCAGT AGCTCAGTAGGAAGAGCG TCAGTCTCAT chrX:422708-423236 + 23 6.13e-07 ATGCTTCAGT AGCTCAGTAGGAAGAGCG TCAGTCTCAT chrIV:1175591-1176084 + 50 6.13e-07 AAGCTTCAGT AGCTCAGTAGGAAGAGCG TCAGTCTCAT chrXVI:860133-860648 + 47 8.18e-07 AAGCGCAAGT GGTTTAGTGGTAAAATCC AACGTTGCCA chrXVI:572045-572571 + 19 8.18e-07 TCGCGCAAGT GGTTTAGTGGTAAAATCC AACGTTGCCA chrXV:281958-282419 + 34 8.18e-07 GCGCGCAAGT GGTTTAGTGGTAAAATCC AACGTTGCCA chrXV:226479-226891 - 21 8.18e-07 CAGCGCAAGT GGTTTAGTGGTAAAATCC AACGTTGCCA chrXIII:183756-184161 - 35 8.18e-07 TCGCGCAAGT GGTTTAGTGGTAAAATCC AACGTTGCCA chrX:531547-532168 + 29 8.18e-07 GAGCGCAAGT GGTTTAGTGGTAAAATCC AACGTTGCCA chrVII:845382-845899 + 67 8.18e-07 AAGCGCAAGT GGTTTAGTGGTAAAATCC AACGTTGCCA chrIV:992595-993067 + 59 8.18e-07 GAGCGCAAGT GGTTTAGTGGTAAAATCC AACGTTGCCA chrIV:83314-83751 + 74 8.18e-07 TAGCGCAAGT GGTTTAGTGGTAAAATCC AACGTTGCC chrXII:605130-605628 - 78 1.22e-06 CGTGT AGCTCAGTGGTTAGAGCT TCGTGCTTAT chrXV:464234-464720 + 31 2.11e-06 AAGGGCGTGT GGTCTAGTGGTATGATTC TCGCTTTGGG chrXV:300857-301357 + 48 2.11e-06 TCGGGCGTGT GGTCTAGTGGTATGATTC TCGCTTTGGG chrXIII:195908-196408 - 37 2.11e-06 AAGGGCGTGT GGTCTAGTGGTATGATTC TCGCTTTGGG chrVIII:388662-389226 - 76 2.11e-06 GGCGTGT GGTCTAGTGGTATGATTC TCGCTTTGGG chrVI:101147-101596 + 63 2.11e-06 TCGGGCGTGT GGTCTAGTGGTATGATTC TCGCTTTGGG chrI:138903-139376 + 71 2.11e-06 ACGGGCGTGT GGTCTAGTGGTATGATTC TCGCTTTGGG chrII:326569-327119 - 46 2.37e-06 CGGGTCCAAT GGTCCAGTGGTTCAAGAC GTCGCCTTTA chrX:745242-745745 + 5 2.50e-06 TGGT AGTGGAGTTGGATATGGG TAATTGGAGG chrXVI:75458-76915 + 27 4.19e-06 TTCTGTTGTT GGCTTAGTGGTTCAGTTC ATTTTGCTTT chrVII:73689-74169 - 6 7.50e-06 TCAATTAAGT GGTTTCGTGGTCTAGTCG GTTAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCBAGTBGKTWRAGSS MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXVI:689357-689862 4.9e-10 13_[+2]_69 chrXIII:258963-259433 4.9e-10 65_[-2]_17 chrXII:784080-784595 4.9e-10 74_[+2]_8 chrXII:167756-168268 4.9e-10 37_[-2]_45 chrX:523857-524311 4.9e-10 33_[-2]_49 chrVIII:132855-133334 4.9e-10 37_[-2]_45 chrVI:191328-191822 4.9e-10 62_[-2]_20 chrIV:1305408-1305897 4.9e-10 35_[+2]_47 chrIV:1150654-1151188 4.9e-10 44_[-2]_38 chrIV:980745-981282 4.9e-10 66_[-2]_16 chrIV:437529-438003 4.9e-10 63_[+2]_19 chrIII:227726-228218 4.9e-10 27_[+2]_55 chrII:226855-227354 4.9e-10 28_[+2]_54 chrI:182348-182806 4.9e-10 50_[-2]_32 chrXVI:819330-819748 6e-10 47_[+2]_35 chrXIV:602126-602534 6e-10 39_[+2]_43 chrXIV:569708-570139 6e-10 41_[-2]_41 chrXII:1051838-1052402 6e-10 48_[-2]_34 chrVII:738890-739457 6e-10 6_[+2]_76 chrV:551115-551581 6e-10 34_[-2]_48 chrV:443040-443504 6e-10 27_[-2]_55 chrIX:210504-210916 6e-10 12_[+2]_70 chrIX:183281-183723 6e-10 35_[-2]_47 chrIV:667769-668279 6e-10 80_[-2]_2 chrXII:731879-732335 1.4e-09 40_[+2]_42 chrX:617711-618188 1.4e-09 27_[+2]_55 chrXII:214688-215163 1.9e-09 54_[-2]_28 chrVII:794170-794622 1.9e-09 78_[+2]_4 chrV:311775-312310 1.9e-09 77_[-2]_5 chrI:166030-166557 1.9e-09 31_[+2]_51 chrXIV:104577-105110 4.5e-09 19_[+2]_63 chrVIII:115921-116441 4.5e-09 22_[-2]_60 chrIX:325501-326063 4.5e-09 23_[+2]_59 chrIX:174827-175298 4.5e-09 26_[+2]_56 chrII:266116-266643 4.5e-09 56_[+2]_26 chrXVI:856758-857121 5.3e-09 20_[+2]_62 chrXIII:768188-768662 5.3e-09 40_[-2]_42 chrXI:517774-518232 5.3e-09 42_[+2]_40 chrXI:219678-220095 5.3e-09 66_[+2]_16 chrX:197131-197598 5.3e-09 45_[-2]_37 chrVII:774110-774651 5.3e-09 26_[+2]_56 chrVI:204741-205215 5.3e-09 42_[-2]_40 chrIV:410157-410701 5.3e-09 7_[+2]_75 chrXIV:725986-726424 6.1e-09 36_[-2]_46 chrXII:962809-963342 6.1e-09 4_[-2]_78 chrXI:83951-84476 6.1e-09 52_[+2]_30 chrX:424264-424721 6.1e-09 47_[-2]_35 chrIV:519545-519966 6.1e-09 45_[+2]_37 chrII:347377-347880 6.1e-09 32_[+2]_50 chrXV:487212-487686 9.5e-09 47_[+2]_35 chrXV:228127-228592 9.5e-09 29_[+2]_53 chrXIV:632391-632898 9.5e-09 12_[+2]_70 chrXII:975782-976282 9.5e-09 48_[-2]_34 chrXI:74389-74926 9.5e-09 24_[+2]_58 chrVII:730902-731440 9.5e-09 23_[+2]_59 chrVI:137241-137806 9.5e-09 60_[-2]_22 chrIII:127502-127897 9.5e-09 74_[+2]_8 chrXVI:768994-769511 3e-08 74_[-2]_8 chrXII:875196-875665 3e-08 3_[+2]_79 chrVII:115236-115803 3e-08 26_[+2]_56 chrIV:359333-359854 3e-08 41_[+2]_41 chrXVI:581811-582393 4.3e-08 17_[+2]_65 chrXIII:480391-480925 4.3e-08 59_[-2]_23 chrX:414724-415292 4.3e-08 15_[+2]_67 chrVII:876032-876730 4.3e-08 70_[+2]_12 chrVII:122046-122538 4.3e-08 34_[+2]_48 chrVI:226535-226951 4.3e-08 41_[-2]_41 chrV:435583-436048 4.3e-08 33_[-2]_49 chrIX:300001-300512 4.3e-08 68_[-2]_14 chrIV:1352272-1352749 4.3e-08 52_[-2]_30 chrIV:1201524-1202055 4.3e-08 18_[+2]_64 chrXII:628154-628653 9.1e-08 37_[+2]_45 chrVII:857213-857660 9.1e-08 79_[-2]_3 chrVII:422685-423497 9.1e-08 58_[+2]_24 chrVII:205308-205778 9.1e-08 35_[+2]_47 chrIV:1461500-1462065 9.1e-08 71_[-2]_11 chrI:180926-181455 9.1e-08 8_[+2]_74 chrXIII:586414-586930 1.4e-07 61_[-2]_21 chrXII:687673-688146 1.4e-07 47_[-2]_35 chrXI:379409-379920 1.4e-07 73_[+2]_9 chrX:378136-378553 1.4e-07 73_[+2]_9 chrVIII:85165-85564 1.4e-07 31_[-2]_51 chrVII:823266-823696 1.4e-07 58_[+2]_24 chrVII:412086-412586 1.4e-07 55_[-2]_27 chrV:469247-469661 1.4e-07 60_[+2]_22 chrV:438481-438986 1.4e-07 24_[+2]_58 chrXVI:560004-560504 1.8e-07 59_[-2]_23 chrXIV:374676-375099 1.8e-07 39_[+2]_43 chrXIII:352064-352520 1.8e-07 45_[+2]_37 chrVIII:358282-358789 1.8e-07 58_[-2]_24 chrVIII:237741-238144 1.8e-07 21_[-2]_61 chrVI:157714-158261 1.8e-07 44_[-2]_38 chrII:36154-36595 1.8e-07 81_[+2]_1 chrXV:340127-340582 3.3e-07 41_[-2]_41 chrXI:490724-491237 3.3e-07 45_[+2]_37 chrX:233685-234205 3.3e-07 51_[+2]_31 chrV:492187-492571 3.3e-07 69_[-2]_13 chrXV:976171-976677 6.1e-07 54_[+2]_28 chrXIII:572689-573213 6.1e-07 28_[-2]_54 chrX:422708-423236 6.1e-07 22_[+2]_60 chrIV:1175591-1176084 6.1e-07 49_[+2]_33 chrXVI:860133-860648 8.2e-07 46_[+2]_36 chrXVI:572045-572571 8.2e-07 18_[+2]_64 chrXV:281958-282419 8.2e-07 33_[+2]_49 chrXV:226479-226891 8.2e-07 20_[-2]_62 chrXIII:183756-184161 8.2e-07 34_[-2]_48 chrX:531547-532168 8.2e-07 28_[+2]_54 chrVII:845382-845899 8.2e-07 66_[+2]_16 chrIV:992595-993067 8.2e-07 58_[+2]_24 chrIV:83314-83751 8.2e-07 73_[+2]_9 chrXII:605130-605628 1.2e-06 77_[-2]_5 chrXV:464234-464720 2.1e-06 30_[+2]_52 chrXV:300857-301357 2.1e-06 47_[+2]_35 chrXIII:195908-196408 2.1e-06 36_[-2]_46 chrVIII:388662-389226 2.1e-06 75_[-2]_7 chrVI:101147-101596 2.1e-06 62_[+2]_20 chrI:138903-139376 2.1e-06 70_[+2]_12 chrII:326569-327119 2.4e-06 45_[-2]_37 chrX:745242-745745 2.5e-06 4_[+2]_78 chrXVI:75458-76915 4.2e-06 26_[+2]_56 chrVII:73689-74169 7.5e-06 5_[-2]_77 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCBAGTBGKTWRAGSS MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGCCBAGTBGKTWRAGSS width=18 seqs=121 chrXVI:689357-689862 ( 14) GGCCGAGTGGTTAAGGCG 1 chrXIII:258963-259433 ( 66) GGCCGAGTGGTTAAGGCG 1 chrXII:784080-784595 ( 75) GGCCGAGTGGTTAAGGCG 1 chrXII:167756-168268 ( 38) GGCCGAGTGGTTAAGGCG 1 chrX:523857-524311 ( 34) GGCCGAGTGGTTAAGGCG 1 chrVIII:132855-133334 ( 38) GGCCGAGTGGTTAAGGCG 1 chrVI:191328-191822 ( 63) GGCCGAGTGGTTAAGGCG 1 chrIV:1305408-1305897 ( 36) GGCCGAGTGGTTAAGGCG 1 chrIV:1150654-1151188 ( 45) GGCCGAGTGGTTAAGGCG 1 chrIV:980745-981282 ( 67) GGCCGAGTGGTTAAGGCG 1 chrIV:437529-438003 ( 64) GGCCGAGTGGTTAAGGCG 1 chrIII:227726-228218 ( 28) GGCCGAGTGGTTAAGGCG 1 chrII:226855-227354 ( 29) GGCCGAGTGGTTAAGGCG 1 chrI:182348-182806 ( 51) GGCCGAGTGGTTAAGGCG 1 chrXVI:819330-819748 ( 48) GGCCCAGTTGGTTAAGGC 1 chrXIV:602126-602534 ( 40) GGCCCAGTTGGTTAAGGC 1 chrXIV:569708-570139 ( 42) GGCCCAGTTGGTTAAGGC 1 chrXII:1051838-1052402 ( 49) GGCCCAGTTGGTTAAGGC 1 chrVII:738890-739457 ( 7) GGCCCAGTTGGTTAAGGC 1 chrV:551115-551581 ( 35) GGCCCAGTTGGTTAAGGC 1 chrV:443040-443504 ( 28) GGCCCAGTTGGTTAAGGC 1 chrIX:210504-210916 ( 13) GGCCCAGTTGGTTAAGGC 1 chrIX:183281-183723 ( 36) GGCCCAGTTGGTTAAGGC 1 chrIV:667769-668279 ( 81) GGCCCAGTTGGTTAAGGC 1 chrXII:731879-732335 ( 41) GGCCGAGTGGTTTAAGGC 1 chrX:617711-618188 ( 28) GGCCGAGTGGTTTAAGGC 1 chrXII:214688-215163 ( 55) GGCGCAGTTGGTAGCGCG 1 chrVII:794170-794622 ( 79) GGCGCAGTTGGTAGCGCG 1 chrV:311775-312310 ( 78) GGCGCAGTTGGTAGCGCG 1 chrI:166030-166557 ( 32) GGCGCAGTTGGTAGCGCG 1 chrXIV:104577-105110 ( 20) GGCCAAGTTGGTAAGGCG 1 chrVIII:115921-116441 ( 23) GGCCAAGTTGGTAAGGCG 1 chrIX:325501-326063 ( 24) GGCCAAGTTGGTAAGGCG 1 chrIX:174827-175298 ( 27) GGCCAAGTTGGTAAGGCG 1 chrII:266116-266643 ( 57) GGCCAAGTTGGTAAGGCG 1 chrXVI:856758-857121 ( 21) GGCGTAGTCGGTAGCGCG 1 chrXIII:768188-768662 ( 41) GGCGTAGTCGGTAGCGCG 1 chrXI:517774-518232 ( 43) GGCGTAGTCGGTAGCGCG 1 chrXI:219678-220095 ( 67) GGCGTAGTCGGTAGCGCG 1 chrX:197131-197598 ( 46) GGCGTAGTCGGTAGCGCG 1 chrVII:774110-774651 ( 27) GGCGTAGTCGGTAGCGCG 1 chrVI:204741-205215 ( 43) GGCGTAGTCGGTAGCGCG 1 chrIV:410157-410701 ( 8) GGCGTAGTCGGTAGCGCG 1 chrXIV:725986-726424 ( 37) GGCCGAGTGGTCTAAGGC 1 chrXII:962809-963342 ( 5) GGCCGAGTGGTCTAAGGC 1 chrXI:83951-84476 ( 53) GGCCGAGTGGTCTAAGGC 1 chrX:424264-424721 ( 48) GGCCGAGTGGTCTAAGGC 1 chrIV:519545-519966 ( 46) GGCCGAGTGGTCTAAGGC 1 chrII:347377-347880 ( 33) GGCCGAGTGGTCTAAGGC 1 chrXV:487212-487686 ( 48) GGCCAAGTTGGTTAAGGC 1 chrXV:228127-228592 ( 30) GGCCAAGTTGGTTAAGGC 1 chrXIV:632391-632898 ( 13) GGCCAAGTTGGTTAAGGC 1 chrXII:975782-976282 ( 49) GGCCAAGTTGGTTAAGGC 1 chrXI:74389-74926 ( 25) GGCCAAGTTGGTTAAGGC 1 chrVII:730902-731440 ( 24) GGCCAAGTTGGTTAAGGC 1 chrVI:137241-137806 ( 61) GGCCAAGTTGGTTAAGGC 1 chrIII:127502-127897 ( 75) GGCCAAGTTGGTTAAGGC 1 chrXVI:768994-769511 ( 75) AGCTCAGTTGGTAGAGCG 1 chrXII:875196-875665 ( 4) AGCTCAGTTGGTAGAGCG 1 chrVII:115236-115803 ( 27) AGCTCAGTTGGTAGAGCG 1 chrIV:359333-359854 ( 42) AGCTCAGTTGGTAGAGCG 1 chrXVI:581811-582393 ( 18) GGCGCAATCGGTAGCGCG 1 chrXIII:480391-480925 ( 60) GGCGCAATCGGTAGCGCG 1 chrX:414724-415292 ( 16) GGCGCAATCGGTAGCGCG 1 chrVII:876032-876730 ( 71) GGCGCAATCGGTAGCGCG 1 chrVII:122046-122538 ( 35) GGCGCAATCGGTAGCGCG 1 chrVI:226535-226951 ( 42) GGCGCAATCGGTAGCGCG 1 chrV:435583-436048 ( 34) GGCGCAATCGGTAGCGCG 1 chrIX:300001-300512 ( 69) GGCGCAATCGGTAGCGCG 1 chrIV:1352272-1352749 ( 53) GGCGCAATCGGTAGCGCG 1 chrIV:1201524-1202055 ( 19) GGCGCAATCGGTAGCGCG 1 chrXII:628154-628653 ( 38) GGCCGAGCGGTCTAAGGC 1 chrVII:857213-857660 ( 80) GGCCGAGCGGTCTAAGGC 1 chrVII:422685-423497 ( 59) GGCCGAGCGGTCTAAGGC 1 chrVII:205308-205778 ( 36) GGCCGAGCGGTCTAAGGC 1 chrIV:1461500-1462065 ( 72) GGCCGAGCGGTCTAAGGC 1 chrI:180926-181455 ( 9) GGCCGAGCGGTCTAAGGC 1 chrXIII:586414-586930 ( 62) GGTCTAGTCGGTTATGGC 1 chrXII:687673-688146 ( 48) GGTCTAGTCGGTTATGGC 1 chrXI:379409-379920 ( 74) GGTCTAGTCGGTTATGGC 1 chrX:378136-378553 ( 74) GGTCTAGTCGGTTATGGC 1 chrVIII:85165-85564 ( 32) GGTCTAGTCGGTTATGGC 1 chrVII:823266-823696 ( 59) GGTCTAGTCGGTTATGGC 1 chrVII:412086-412586 ( 56) GGTCTAGTCGGTTATGGC 1 chrV:469247-469661 ( 61) GGTCTAGTCGGTTATGGC 1 chrV:438481-438986 ( 25) GGTCTAGTCGGTTATGGC 1 chrXVI:560004-560504 ( 60) AGCTCAGTTGGGAGAGCG 1 chrXIV:374676-375099 ( 40) AGCTCAGTTGGGAGAGCG 1 chrXIII:352064-352520 ( 46) AGCTCAGTTGGGAGAGCG 1 chrVIII:358282-358789 ( 59) AGCTCAGTTGGGAGAGCG 1 chrVIII:237741-238144 ( 22) AGCTCAGTTGGGAGAGCG 1 chrVI:157714-158261 ( 45) AGCTCAGTTGGGAGAGCG 1 chrII:36154-36595 ( 82) AGCTCAGTTGGGAGAGCG 1 chrXV:340127-340582 ( 42) GGCCCAATGGTCACGGCG 1 chrXI:490724-491237 ( 46) GGCCCAATGGTCACGGCG 1 chrX:233685-234205 ( 52) GGCCCAATGGTCACGGCG 1 chrV:492187-492571 ( 70) GGCCCAATGGTCACGGCG 1 chrXV:976171-976677 ( 55) AGCTCAGTAGGAAGAGCG 1 chrXIII:572689-573213 ( 29) AGCTCAGTAGGAAGAGCG 1 chrX:422708-423236 ( 23) AGCTCAGTAGGAAGAGCG 1 chrIV:1175591-1176084 ( 50) AGCTCAGTAGGAAGAGCG 1 chrXVI:860133-860648 ( 47) GGTTTAGTGGTAAAATCC 1 chrXVI:572045-572571 ( 19) GGTTTAGTGGTAAAATCC 1 chrXV:281958-282419 ( 34) GGTTTAGTGGTAAAATCC 1 chrXV:226479-226891 ( 21) GGTTTAGTGGTAAAATCC 1 chrXIII:183756-184161 ( 35) GGTTTAGTGGTAAAATCC 1 chrX:531547-532168 ( 29) GGTTTAGTGGTAAAATCC 1 chrVII:845382-845899 ( 67) GGTTTAGTGGTAAAATCC 1 chrIV:992595-993067 ( 59) GGTTTAGTGGTAAAATCC 1 chrIV:83314-83751 ( 74) GGTTTAGTGGTAAAATCC 1 chrXII:605130-605628 ( 78) AGCTCAGTGGTTAGAGCT 1 chrXV:464234-464720 ( 31) GGTCTAGTGGTATGATTC 1 chrXV:300857-301357 ( 48) GGTCTAGTGGTATGATTC 1 chrXIII:195908-196408 ( 37) GGTCTAGTGGTATGATTC 1 chrVIII:388662-389226 ( 76) GGTCTAGTGGTATGATTC 1 chrVI:101147-101596 ( 63) GGTCTAGTGGTATGATTC 1 chrI:138903-139376 ( 71) GGTCTAGTGGTATGATTC 1 chrII:326569-327119 ( 46) GGTCCAGTGGTTCAAGAC 1 chrX:745242-745745 ( 5) AGTGGAGTTGGATATGGG 1 chrXVI:75458-76915 ( 27) GGCTTAGTGGTTCAGTTC 1 chrVII:73689-74169 ( 6) GGTTTCGTGGTCTAGTCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCBAGTBGKTWRAGSS MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 18 n= 43160 bayes= 10.4609 E= 8.3e-348 -115 -1356 219 -1356 -1356 -1356 241 -1356 -1356 204 -1356 -48 -1356 164 1 -48 -154 98 35 -15 167 -451 -1356 -1356 -143 -1356 223 -1356 -1356 -193 -1356 161 -324 24 116 5 -1356 -1356 241 -1356 -1356 -1356 162 44 -91 -42 -170 103 89 -351 -1356 38 95 -251 95 -1356 76 -5 13 -191 -1356 -1356 219 -115 -523 164 88 -243 -1356 135 144 -523 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCBAGTBGKTWRAGSS MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 18 nsites= 121 E= 8.3e-348 0.140496 0.000000 0.859504 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.776860 0.000000 0.223140 0.000000 0.586777 0.190083 0.223140 0.107438 0.371901 0.239669 0.280992 0.991736 0.008264 0.000000 0.000000 0.115702 0.000000 0.884298 0.000000 0.000000 0.049587 0.000000 0.950413 0.033058 0.223140 0.421488 0.322314 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.578512 0.421488 0.165289 0.140496 0.057851 0.636364 0.578512 0.016529 0.000000 0.404959 0.603306 0.033058 0.363636 0.000000 0.528926 0.181818 0.206612 0.082645 0.000000 0.000000 0.859504 0.140496 0.008264 0.586777 0.347107 0.057851 0.000000 0.479339 0.512397 0.008264 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCBAGTBGKTWRAGSS MEME-2 regular expression -------------------------------------------------------------------------------- GG[CT][CT][CTG]AGT[GTC]G[GT]T[AT][AG][AG]G[CG][GC] -------------------------------------------------------------------------------- Time 494.51 secs. ******************************************************************************** ******************************************************************************** MOTIF GTKTARTGGTTAKVABDBBCSSTTK MEME-3 width = 25 sites = 52 llr = 916 E-value = 2.1e-147 ******************************************************************************** -------------------------------------------------------------------------------- Motif GTKTARTGGTTAKVABDBBCSSTTK MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::1:a6::::29127:3:222:::: pos.-specific C :2::::3::32:2424:325352:2 probability G a16::4:aa::13312333255:15 matrix T :73a::8::76:41:34431::893 bits 2.4 * ** 2.2 * ** 1.9 * ** 1.7 * * ** Relative 1.4 * ** ** * * Entropy 1.2 * ** ** * *** (25.4 bits) 1.0 * ******* * *** 0.7 ********** * ** ***** 0.5 ************ ** * ****** 0.2 ************************* 0.0 ------------------------- Multilevel GTGTAATGGTTATCACTTGCGCTTG consensus CT GC CA GGCTGCT CG T sequence C A GAG A C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTKTARTGGTTAKVABDBBCSSTTK MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------- chrVIII:134083-134549 + 64 5.12e-12 CGGTCCTATA GTGTAGTGGTTATCACTTTCGGTTT TGATCCGGAC chrV:250073-250520 + 49 5.12e-12 TGGTCCTATA GTGTAGTGGTTATCACTTTCGGTTT TGATCCGGAC chrV:130845-131385 - 55 5.12e-12 AGGTTTTATA GTGTAGTGGTTATCACTTTCGGTTT TGATCCGAAC chrIV:802571-803001 - 33 5.12e-12 CGGTCCTATA GTGTAGTGGTTATCACTTTCGGTTT TGATCCGGAC chrIV:644958-645389 - 68 5.12e-12 GTCCTATA GTGTAGTGGTTATCACTTTCGGTTT TGATCCGGAC chrIV:520722-521294 + 23 5.12e-12 GGGTCCTATA GTGTAGTGGTTATCACTTTCGGTTT TGATCCGGAC chrIII:168128-168610 - 20 5.12e-12 TGGTCCTATA GTGTAGTGGTTATCACTTTCGGTTT TGATCCGGAC chrII:350587-351055 + 65 5.12e-12 GGGTTTTATA GTGTAGTGGTTATCACTTTCGGTTT TGATCCGGAC chrXIII:463281-463886 + 30 1.01e-10 GTCCGTGATA GTTTAATGGTCAGAATGGGCGCTTG TCGCGTGCCA chrXII:426880-427464 + 19 1.01e-10 ATCCGTGATA GTTTAATGGTCAGAATGGGCGCTTG TCGCGTGCCA chrXI:513145-513609 - 43 1.01e-10 TTCCGTGATA GTTTAATGGTCAGAATGGGCGCTTG TCGCGTGCCA chrX:541282-541818 + 17 1.01e-10 ATCCGTGATA GTTTAATGGTCAGAATGGGCGCTTG TCGCGTGCCA chrX:204513-204969 + 53 1.01e-10 ATCCGTGATA GTTTAATGGTCAGAATGGGCGCTTG TCGCGTGCCA chrVII:544301-544893 - 68 1.01e-10 CCGTGATA GTTTAATGGTCAGAATGGGCGCTTG TCGCGTGCCA chrVII:531388-531812 + 69 1.01e-10 TTCCGTGATA GTTTAATGGTCAGAATGGGCGCTTG TCGCGTG chrIX:336116-336685 - 37 1.01e-10 ATCCGTGATA GTTTAATGGTCAGAATGGGCGCTTG TCGCGTGCCA chrIX:324133-324616 - 17 1.01e-10 TTCCGTGATA GTTTAATGGTCAGAATGGGCGCTTG TCGCGTGCCA chrIV:568686-569296 + 32 1.01e-10 TTCCGTGATA GTTTAATGGTCAGAATGGGCGCTTG TCGCGTGCCA chrII:405596-406299 + 72 1.01e-10 TTCCGTGATA GTTTAATGGTCAGAATGGGCGCTTG TCGC chrIV:1075286-1075775 - 31 3.46e-10 TGTTCCAATA GTGTAGCGGCTATCACGTTGCCTTC ACACGGCAAA chrIV:1016961-1017507 - 61 1.94e-09 ATCCGATGTA GTGTAACGGCTATCACATCACGTTC TCACCGTGGA chrXIV:6464-7210 - 51 2.80e-09 GGTAATTGGA GGGTAACGGTTATGATGGGCGGTGG ATGGTAGTAG chrXVI:209979-210497 - 42 6.75e-09 GTCCGATATA GTGTAACGGCTATCACATCACGCTT TCACCGTGGA chrX:115710-116204 - 70 6.75e-09 GATATA GTGTAACGGCTATCACATCACGCTT TCACCGTGGA chrVII:328351-328912 + 11 6.75e-09 GTCCGATATA GTGTAACGGCTATCACATCACGCTT TCACCGTGGA chrV:487088-487697 - 27 6.75e-09 ATCCGATATA GTGTAACGGCTATCACATCACGCTT TCACCGTGGA chrV:176818-177396 + 51 6.75e-09 ATCCGATATA GTGTAACGGCTATCACATCACGCTT TCACCGTGGA chrIX:370214-370636 + 51 6.75e-09 ATCCGATATA GTGTAACGGCTATCACATCACGCTT TCACCGTGGA chrII:644960-645414 + 39 6.75e-09 ATCCGATATA GTGTAACGGCTATCACATCACGCTT TCACCGTGGA chrXIV:96035-96553 - 35 1.43e-08 TGGGCGGTTA GTGTAGTGGTTATCATCCCACCCTT CCAAGGTGGG chrVII:779372-779896 + 41 1.43e-08 CGGGCGGTTA GTGTAGTGGTTATCATCCCACCCTT CCAAGGTGGG chrXIV:783450-784325 + 16 1.99e-08 GGTAATTGGA GGGTAACGGTTATGGTGGGCGGTGG TTAGTGGTAA chrXIII:747751-748162 - 24 2.33e-08 AGCTCGCGTG GCGTAATGGCAACGCGTCTGACTTC TAATCAGAAG chrXI:162278-162773 - 50 2.33e-08 AGCTCGCGTG GCGTAATGGCAACGCGTCTGACTTC TAATCAGAAG chrX:374214-374827 - 74 2.33e-08 TG GCGTAATGGCAACGCGTCTGACTTC TAATCAGAAG chrX:355123-355727 + 8 2.33e-08 TCGCGTG GCGTAATGGCAACGCGTCTGACTTC TAATCAGAAG chrVII:828458-829036 - 64 2.33e-08 AGCTCGCGTG GCGTAATGGCAACGCGTCTGACTTC TAATCAGAAG chrVII:736186-736571 + 21 2.33e-08 AGCTCGCGTG GCGTAATGGCAACGCGTCTGACTTC TAATCAGAAG chrVII:405265-405768 + 13 2.33e-08 AGCTCGCGTG GCGTAATGGCAACGCGTCTGACTTC TAATCAGAAG chrXIII:362886-363331 + 15 4.12e-08 TGCCATCTTA GTATAGTGGTTAGTACACATCGTTG TGGCCGATGA chrXI:313195-313673 - 55 4.12e-08 TGCCATCTTA GTATAGTGGTTAGTACACATCGTTG TGGCCGATGA chrVII:110431-110954 - 21 4.12e-08 TGCCATCTTA GTATAGTGGTTAGTACACATCGTTG TGGCCGATGA chrV:434380-434786 - 46 4.12e-08 CGCCATCTTA GTATAGTGGTTAGTACACATCGTTG TGGCCGATGA chrV:207117-207686 + 15 4.12e-08 CGCCATCTTA GTATAGTGGTTAGTACACATCGTTG TGGCCGATGA chrX:538340-538749 + 70 4.39e-08 GGTTCCGTTG GCGTAATGGTAACGCGTCTCCCTCC TAAGGA chrXII:11013-11986 - 51 4.68e-08 GGTAATTGGA GGGTAACGGTTATGGTGGACGGTGG TTAGTGGTAA chrX:745242-745745 + 31 4.68e-08 GGTAATTGGA GGGTAACGGTTATGGTGGACGGTGG ATGGTAGTAG chrXVI:744058-744603 + 13 6.32e-08 AGCCTCCTTA GCTTAGTGGTAGAGCGTTGCACTTG TAATGCAAAG chrVIII:466728-467364 + 3 6.32e-08 TA GCTTAGTGGTAGAGCGTTGCACTTG TAATGCAAAG chrVII:1003998-1004454 + 49 6.32e-08 TGCCTCCTTA GCTTAGTGGTAGAGCGTTGCACTTG TAATGCAAAG chrVII:661507-661975 + 67 6.32e-08 TGCCTCCTTA GCTTAGTGGTAGAGCGTTGCACTTG TAATGCAAA chrXV:594190-594681 - 7 1.16e-07 CGCGCAAGTG GTTCAGTGGTTAGAATTTATGCTTC CCAAGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTKTARTGGTTAKVABDBBCSSTTK MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrVIII:134083-134549 5.1e-12 63_[+3]_12 chrV:250073-250520 5.1e-12 48_[+3]_27 chrV:130845-131385 5.1e-12 54_[-3]_21 chrIV:802571-803001 5.1e-12 32_[-3]_43 chrIV:644958-645389 5.1e-12 67_[-3]_8 chrIV:520722-521294 5.1e-12 22_[+3]_53 chrIII:168128-168610 5.1e-12 19_[-3]_56 chrII:350587-351055 5.1e-12 64_[+3]_11 chrXIII:463281-463886 1e-10 29_[+3]_46 chrXII:426880-427464 1e-10 18_[+3]_57 chrXI:513145-513609 1e-10 42_[-3]_33 chrX:541282-541818 1e-10 16_[+3]_59 chrX:204513-204969 1e-10 52_[+3]_23 chrVII:544301-544893 1e-10 67_[-3]_8 chrVII:531388-531812 1e-10 68_[+3]_7 chrIX:336116-336685 1e-10 36_[-3]_39 chrIX:324133-324616 1e-10 16_[-3]_59 chrIV:568686-569296 1e-10 31_[+3]_44 chrII:405596-406299 1e-10 71_[+3]_4 chrIV:1075286-1075775 3.5e-10 30_[-3]_45 chrIV:1016961-1017507 1.9e-09 60_[-3]_15 chrXIV:6464-7210 2.8e-09 50_[-3]_25 chrXVI:209979-210497 6.7e-09 41_[-3]_34 chrX:115710-116204 6.7e-09 69_[-3]_6 chrVII:328351-328912 6.7e-09 10_[+3]_65 chrV:487088-487697 6.7e-09 26_[-3]_49 chrV:176818-177396 6.7e-09 50_[+3]_25 chrIX:370214-370636 6.7e-09 50_[+3]_25 chrII:644960-645414 6.7e-09 38_[+3]_37 chrXIV:96035-96553 1.4e-08 34_[-3]_41 chrVII:779372-779896 1.4e-08 40_[+3]_35 chrXIV:783450-784325 2e-08 15_[+3]_60 chrXIII:747751-748162 2.3e-08 23_[-3]_52 chrXI:162278-162773 2.3e-08 49_[-3]_26 chrX:374214-374827 2.3e-08 73_[-3]_2 chrX:355123-355727 2.3e-08 7_[+3]_68 chrVII:828458-829036 2.3e-08 63_[-3]_12 chrVII:736186-736571 2.3e-08 20_[+3]_55 chrVII:405265-405768 2.3e-08 12_[+3]_63 chrXIII:362886-363331 4.1e-08 14_[+3]_61 chrXI:313195-313673 4.1e-08 54_[-3]_21 chrVII:110431-110954 4.1e-08 20_[-3]_55 chrV:434380-434786 4.1e-08 45_[-3]_30 chrV:207117-207686 4.1e-08 14_[+3]_61 chrX:538340-538749 4.4e-08 69_[+3]_6 chrXII:11013-11986 4.7e-08 50_[-3]_25 chrX:745242-745745 4.7e-08 30_[+3]_45 chrXVI:744058-744603 6.3e-08 12_[+3]_63 chrVIII:466728-467364 6.3e-08 2_[+3]_73 chrVII:1003998-1004454 6.3e-08 48_[+3]_27 chrVII:661507-661975 6.3e-08 66_[+3]_9 chrXV:594190-594681 1.2e-07 6_[-3]_69 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTKTARTGGTTAKVABDBBCSSTTK MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GTKTARTGGTTAKVABDBBCSSTTK width=25 seqs=52 chrVIII:134083-134549 ( 64) GTGTAGTGGTTATCACTTTCGGTTT 1 chrV:250073-250520 ( 49) GTGTAGTGGTTATCACTTTCGGTTT 1 chrV:130845-131385 ( 55) GTGTAGTGGTTATCACTTTCGGTTT 1 chrIV:802571-803001 ( 33) GTGTAGTGGTTATCACTTTCGGTTT 1 chrIV:644958-645389 ( 68) GTGTAGTGGTTATCACTTTCGGTTT 1 chrIV:520722-521294 ( 23) GTGTAGTGGTTATCACTTTCGGTTT 1 chrIII:168128-168610 ( 20) GTGTAGTGGTTATCACTTTCGGTTT 1 chrII:350587-351055 ( 65) GTGTAGTGGTTATCACTTTCGGTTT 1 chrXIII:463281-463886 ( 30) GTTTAATGGTCAGAATGGGCGCTTG 1 chrXII:426880-427464 ( 19) GTTTAATGGTCAGAATGGGCGCTTG 1 chrXI:513145-513609 ( 43) GTTTAATGGTCAGAATGGGCGCTTG 1 chrX:541282-541818 ( 17) GTTTAATGGTCAGAATGGGCGCTTG 1 chrX:204513-204969 ( 53) GTTTAATGGTCAGAATGGGCGCTTG 1 chrVII:544301-544893 ( 68) GTTTAATGGTCAGAATGGGCGCTTG 1 chrVII:531388-531812 ( 69) GTTTAATGGTCAGAATGGGCGCTTG 1 chrIX:336116-336685 ( 37) GTTTAATGGTCAGAATGGGCGCTTG 1 chrIX:324133-324616 ( 17) GTTTAATGGTCAGAATGGGCGCTTG 1 chrIV:568686-569296 ( 32) GTTTAATGGTCAGAATGGGCGCTTG 1 chrII:405596-406299 ( 72) GTTTAATGGTCAGAATGGGCGCTTG 1 chrIV:1075286-1075775 ( 31) GTGTAGCGGCTATCACGTTGCCTTC 1 chrIV:1016961-1017507 ( 61) GTGTAACGGCTATCACATCACGTTC 1 chrXIV:6464-7210 ( 51) GGGTAACGGTTATGATGGGCGGTGG 1 chrXVI:209979-210497 ( 42) GTGTAACGGCTATCACATCACGCTT 1 chrX:115710-116204 ( 70) GTGTAACGGCTATCACATCACGCTT 1 chrVII:328351-328912 ( 11) GTGTAACGGCTATCACATCACGCTT 1 chrV:487088-487697 ( 27) GTGTAACGGCTATCACATCACGCTT 1 chrV:176818-177396 ( 51) GTGTAACGGCTATCACATCACGCTT 1 chrIX:370214-370636 ( 51) GTGTAACGGCTATCACATCACGCTT 1 chrII:644960-645414 ( 39) GTGTAACGGCTATCACATCACGCTT 1 chrXIV:96035-96553 ( 35) GTGTAGTGGTTATCATCCCACCCTT 1 chrVII:779372-779896 ( 41) GTGTAGTGGTTATCATCCCACCCTT 1 chrXIV:783450-784325 ( 16) GGGTAACGGTTATGGTGGGCGGTGG 1 chrXIII:747751-748162 ( 24) GCGTAATGGCAACGCGTCTGACTTC 1 chrXI:162278-162773 ( 50) GCGTAATGGCAACGCGTCTGACTTC 1 chrX:374214-374827 ( 74) GCGTAATGGCAACGCGTCTGACTTC 1 chrX:355123-355727 ( 8) GCGTAATGGCAACGCGTCTGACTTC 1 chrVII:828458-829036 ( 64) GCGTAATGGCAACGCGTCTGACTTC 1 chrVII:736186-736571 ( 21) GCGTAATGGCAACGCGTCTGACTTC 1 chrVII:405265-405768 ( 13) GCGTAATGGCAACGCGTCTGACTTC 1 chrXIII:362886-363331 ( 15) GTATAGTGGTTAGTACACATCGTTG 1 chrXI:313195-313673 ( 55) GTATAGTGGTTAGTACACATCGTTG 1 chrVII:110431-110954 ( 21) GTATAGTGGTTAGTACACATCGTTG 1 chrV:434380-434786 ( 46) GTATAGTGGTTAGTACACATCGTTG 1 chrV:207117-207686 ( 15) GTATAGTGGTTAGTACACATCGTTG 1 chrX:538340-538749 ( 70) GCGTAATGGTAACGCGTCTCCCTCC 1 chrXII:11013-11986 ( 51) GGGTAACGGTTATGGTGGACGGTGG 1 chrX:745242-745745 ( 31) GGGTAACGGTTATGGTGGACGGTGG 1 chrXVI:744058-744603 ( 13) GCTTAGTGGTAGAGCGTTGCACTTG 1 chrVIII:466728-467364 ( 3) GCTTAGTGGTAGAGCGTTGCACTTG 1 chrVII:1003998-1004454 ( 49) GCTTAGTGGTAGAGCGTTGCACTTG 1 chrVII:661507-661975 ( 67) GCTTAGTGGTAGAGCGTTGCACTTG 1 chrXV:594190-594681 ( 7) GTTCAGTGGTTAGAATTTATGCTTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTKTARTGGTTAKVABDBBCSSTTK MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 25 n= 39520 bayes= 9.32319 E= 2.1e-147 -1234 -1234 241 -1234 -1234 29 -129 115 -170 -1234 166 -2 -1234 -329 -1234 165 168 -1234 -1234 -1234 94 -1234 110 -1234 -1234 41 -1234 127 -1234 -1234 241 -1234 -1234 -1234 241 -1234 -1234 71 -1234 115 -43 17 -1234 84 157 -1234 -129 -1234 -202 -29 79 51 -43 95 71 -170 119 29 -171 -1234 -1234 117 29 15 -32 -229 71 37 -1234 61 61 44 -102 3 79 7 -70 151 -29 -143 -56 79 129 -1234 -1234 146 135 -1234 -1234 -12 -1234 141 -1234 -329 -129 154 -1234 17 129 7 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTKTARTGGTTAKVABDBBCSSTTK MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 25 nsites= 52 E= 2.1e-147 0.000000 0.000000 1.000000 0.000000 0.000000 0.230769 0.076923 0.692308 0.096154 0.000000 0.596154 0.307692 0.000000 0.019231 0.000000 0.980769 1.000000 0.000000 0.000000 0.000000 0.596154 0.000000 0.403846 0.000000 0.000000 0.250000 0.000000 0.750000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.307692 0.000000 0.692308 0.230769 0.211538 0.000000 0.557692 0.923077 0.000000 0.076923 0.000000 0.076923 0.153846 0.326923 0.442308 0.230769 0.365385 0.307692 0.096154 0.711538 0.230769 0.057692 0.000000 0.000000 0.423077 0.230769 0.346154 0.250000 0.038462 0.307692 0.403846 0.000000 0.288462 0.288462 0.423077 0.153846 0.192308 0.326923 0.326923 0.192308 0.538462 0.153846 0.115385 0.211538 0.326923 0.461538 0.000000 0.000000 0.519231 0.480769 0.000000 0.000000 0.173077 0.000000 0.826923 0.000000 0.019231 0.076923 0.903846 0.000000 0.211538 0.461538 0.326923 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTKTARTGGTTAKVABDBBCSSTTK MEME-3 regular expression -------------------------------------------------------------------------------- G[TC][GT]TA[AG][TC]GG[TC][TAC]A[TG][CGA][AC][CTG][TGA][TCG][GT]C[GCA][CG]TT[GTC] -------------------------------------------------------------------------------- Time 707.31 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrI:2-1115 1.99e-02 65_[-2(3.46e-05)]_17 chrI:71630-73637 7.46e-02 100 chrI:81927-82294 1.64e-01 100 chrI:138903-139376 1.27e-03 70_[+2(2.11e-06)]_12 chrI:142116-143598 1.01e-01 100 chrI:166030-166557 1.59e-14 31_[+2(1.94e-09)]_17_[-1(4.27e-11)]_\ 13 chrI:180926-181455 5.50e-04 8_[+2(9.12e-08)]_74 chrI:182348-182806 2.20e-09 3_[+1(6.97e-07)]_26_[-2(4.88e-10)]_\ 32 chrI:229114-230195 9.35e-02 100 chrII:9355-9984 8.42e-05 17_[-1(1.30e-06)]_62 chrII:36154-36595 1.06e-04 81_[+2(1.79e-07)]_1 chrII:44930-45386 9.41e-01 100 chrII:59833-61295 1.50e-01 100 chrII:87940-88583 6.18e-01 100 chrII:89647-90036 9.59e-01 100 chrII:165076-165413 1.21e-01 100 chrII:167311-169658 1.00e+00 100 chrII:181273-181641 8.45e-01 100 chrII:197228-197899 1.05e-08 24_[-1(1.82e-10)]_55 chrII:226855-227354 2.20e-09 28_[+2(4.88e-10)]_26_[-1(6.97e-07)]_\ 7 chrII:266116-266643 2.42e-05 56_[+2(4.49e-09)]_26 chrII:326569-327119 6.62e-09 6_[+1(2.89e-09)]_18_[-2(2.37e-06)]_\ 37 chrII:332190-333694 9.16e-01 100 chrII:347377-347880 8.16e-10 32_[+2(6.14e-09)]_28_[-1(1.30e-06)]_\ 1 chrII:350587-351055 1.87e-09 64_[+3(5.12e-12)]_11 chrII:405596-406299 2.42e-13 22_[-1(3.71e-09)]_28_[+3(1.01e-10)]_\ 4 chrII:415485-415928 2.16e-01 100 chrII:477093-477781 2.74e-01 100 chrII:504518-504724 5.25e-01 100 chrII:544569-544867 6.94e-01 100 chrII:592337-593522 2.16e-01 100 chrII:604051-607118 3.67e-01 100 chrII:642856-643444 7.80e-01 100 chrII:644960-645414 3.20e-12 38_[+3(6.75e-09)]_8_[-1(8.58e-10)]_\ 8 chrII:680385-682183 6.49e-01 100 chrIII:2-1718 1.54e-01 100 chrIII:11081-11516 1.00e+00 100 chrIII:14046-16909 2.00e-01 100 chrIII:58704-59006 8.47e-01 100 chrIII:82019-82746 9.99e-01 100 chrIII:123366-123818 1.28e-10 43_[+1(5.04e-13)]_16_[-2(8.42e-05)]_\ 2 chrIII:127502-127897 1.35e-04 74_[+2(9.49e-09)]_8 chrIII:142343-142998 9.65e-01 100 chrIII:163477-163889 1.08e-01 100 chrIII:168128-168610 1.13e-09 19_[-3(5.12e-12)]_56 chrIII:177079-178797 9.83e-01 100 chrIII:227726-228218 9.09e-07 27_[+2(4.88e-10)]_55 chrIII:294624-295841 8.02e-01 100 chrIII:315634-316620 5.98e-01 100 chrIV:28-374 4.29e-01 100 chrIV:83314-83751 7.41e-05 73_[+2(8.18e-07)]_9 chrIV:116927-118226 1.61e-01 100 chrIV:129940-131018 3.14e-01 100 chrIV:216572-218067 2.32e-01 100 chrIV:220965-222386 3.63e-01 100 chrIV:229434-230702 9.72e-01 100 chrIV:307946-310167 4.67e-02 100 chrIV:321605-321978 5.56e-01 100 chrIV:340376-341779 2.80e-01 100 chrIV:358033-358482 8.97e-01 100 chrIV:359333-359854 3.98e-06 41_[+2(3.04e-08)]_41 chrIV:410157-410701 1.61e-13 7_[+2(5.27e-09)]_17_[-1(1.08e-10)]_\ 37 chrIV:411244-411661 3.87e-01 100 chrIV:434017-434541 6.39e-10 43_[+1(2.43e-08)]_17_[-2(4.49e-09)]_\ 1 chrIV:437529-438003 7.59e-06 63_[+2(4.88e-10)]_19 chrIV:488406-489158 3.80e-05 73_[+1(2.89e-09)]_6 chrIV:490929-492763 5.74e-01 100 chrIV:519545-519966 5.51e-06 45_[+2(6.14e-09)]_37 chrIV:520308-520542 6.13e-01 100 chrIV:520722-521294 1.53e-14 22_[+3(5.12e-12)]_8_[-1(4.19e-09)]_\ 24 chrIV:538925-539245 4.50e-02 75_[-1(5.61e-05)]_4 chrIV:568686-569296 1.88e-12 31_[+3(1.01e-10)]_8_[-1(3.26e-08)]_\ 15 chrIV:578841-580721 9.68e-01 100 chrIV:619688-620243 2.46e-04 62_[+1(7.99e-08)]_17 chrIV:644958-645389 9.42e-14 38_[+1(4.19e-09)]_8_[-3(5.12e-12)]_\ 8 chrIV:667769-668279 1.53e-13 41_[+1(1.82e-10)]_18_[-2(6.03e-10)]_\ 2 chrIV:721157-721487 3.98e-01 100 chrIV:802571-803001 1.53e-14 3_[+1(4.19e-09)]_8_[-3(5.12e-12)]_\ 43 chrIV:835772-836586 1.19e-01 100 chrIV:884164-884682 9.14e-01 100 chrIV:915287-916219 8.36e-01 100 chrIV:946129-946625 3.27e-04 43_[-1(5.66e-08)]_36 chrIV:980745-981282 4.26e-10 19_[+1(6.97e-07)]_26_[-2(4.88e-10)]_\ 16 chrIV:992595-993067 3.10e-04 58_[+2(8.18e-07)]_24 chrIV:1013069-1013974 6.01e-03 59_[-3(2.38e-05)]_16 chrIV:1016961-1017507 8.34e-12 31_[+1(8.58e-10)]_8_[-3(1.94e-09)]_\ 15 chrIV:1075286-1075775 1.43e-13 [+1(9.07e-11)]_9_[-3(3.46e-10)]_45 chrIV:1095107-1095700 1.98e-08 25_[+1(7.34e-08)]_36_[-2(1.79e-07)] chrIV:1150654-1151188 6.61e-07 44_[-2(4.88e-10)]_38 chrIV:1175591-1176084 4.08e-04 49_[+2(6.13e-07)]_33 chrIV:1201524-1202055 1.14e-11 18_[+2(4.30e-08)]_17_[-1(2.15e-10)]_\ 26 chrIV:1256898-1257295 1.85e-01 100 chrIV:1278635-1279029 2.03e-01 100 chrIV:1300720-1301364 8.37e-01 100 chrIV:1305408-1305897 7.19e-06 35_[+2(4.88e-10)]_47 chrIV:1352272-1352749 1.14e-11 14_[+1(2.15e-10)]_17_[-2(4.30e-08)]_\ 30 chrIV:1354444-1356262 8.95e-01 100 chrIV:1359235-1360818 9.78e-01 100 chrIV:1401216-1401895 4.36e-01 100 chrIV:1450340-1451459 9.81e-01 100 chrIV:1461500-1462065 1.35e-04 71_[-2(9.12e-08)]_11 chrIV:1489074-1489907 9.98e-01 100 chrIV:1524129-1525657 3.18e-01 100 chrIX:0-231 6.33e-01 100 chrIX:68176-68545 7.19e-01 100 chrIX:98427-100049 4.16e-01 100 chrIX:131866-132095 8.78e-01 100 chrIX:174827-175298 6.39e-10 26_[+2(4.49e-09)]_17_[-1(2.43e-08)]_\ 18 chrIX:183281-183723 1.14e-06 35_[-2(6.03e-10)]_47 chrIX:197316-197800 8.91e-01 100 chrIX:210504-210916 1.53e-13 12_[+2(6.03e-10)]_18_[-1(1.82e-10)]_\ 31 chrIX:232729-233192 7.64e-01 100 chrIX:248629-249370 3.30e-01 100 chrIX:254214-254563 1.80e-01 100 chrIX:257339-258271 3.83e-01 100 chrIX:300001-300512 2.50e-12 30_[+1(2.15e-10)]_17_[-2(4.30e-08)]_\ 14 chrIX:316113-318214 7.96e-01 100 chrIX:324133-324616 1.47e-07 16_[-3(1.01e-10)]_59 chrIX:325501-326063 6.39e-10 23_[+2(4.49e-09)]_17_[-1(2.43e-08)]_\ 21 chrIX:336116-336685 1.88e-12 7_[+1(3.26e-08)]_8_[-3(1.01e-10)]_\ 39 chrIX:370214-370636 3.80e-06 50_[+3(6.75e-09)]_25 chrIX:438667-439887 4.28e-02 50_[+2(7.86e-05)]_32 chrV:6161-7044 9.16e-01 100 chrV:13334-13611 7.46e-01 100 chrV:53518-53962 5.41e-01 100 chrV:61062-62183 4.15e-01 100 chrV:69100-69300 1.12e-02 21_[+2(4.10e-05)]_61 chrV:85117-86867 5.32e-01 100 chrV:99889-100356 1.38e-01 100 chrV:117639-118313 9.76e-01 100 chrV:130845-131385 2.55e-14 25_[+1(4.19e-09)]_8_[-3(5.12e-12)]_\ 21 chrV:135147-135691 1.15e-07 64_[+1(2.15e-10)]_15 chrV:138433-140899 3.80e-01 100 chrV:152151-153011 6.60e-01 100 chrV:176818-177396 4.95e-06 50_[+3(6.75e-09)]_25 chrV:207117-207686 2.41e-08 14_[+3(4.12e-08)]_8_[-1(4.05e-07)]_\ 32 chrV:250073-250520 1.13e-09 48_[+3(5.12e-12)]_27 chrV:270374-270709 3.28e-01 100 chrV:288181-288736 2.51e-03 43_[+1(1.96e-06)]_36 chrV:305772-306924 7.67e-01 100 chrV:311775-312310 1.59e-14 39_[+1(4.27e-11)]_17_[-2(1.94e-09)]_\ 5 chrV:321795-323178 9.05e-01 100 chrV:354679-355371 2.58e-06 [-1(8.58e-10)]_79 chrV:362139-363260 6.83e-01 100 chrV:396137-397902 6.29e-01 100 chrV:423076-424326 4.53e-01 100 chrV:430975-431569 2.94e-01 100 chrV:434380-434786 2.41e-08 16_[+1(4.05e-07)]_8_[-3(4.12e-08)]_\ 30 chrV:435583-436048 2.91e-05 33_[-2(4.30e-08)]_49 chrV:438481-438986 6.66e-10 24_[+2(1.35e-07)]_18_[-1(1.96e-09)]_\ 19 chrV:441785-442676 5.90e-01 100 chrV:443040-443504 1.14e-06 27_[-2(6.03e-10)]_55 chrV:469247-469661 2.40e-04 60_[+2(1.35e-07)]_22 chrV:487088-487697 4.86e-06 26_[-3(6.75e-09)]_49 chrV:492187-492571 2.38e-09 31_[+1(7.99e-08)]_17_[-2(3.28e-07)]_\ 13 chrV:551115-551581 4.22e-07 34_[-2(6.03e-10)]_48 chrVI:4472-5878 2.83e-01 100 chrVI:63950-65389 5.93e-01 100 chrVI:95479-95869 1.01e-01 100 chrVI:101147-101596 1.27e-03 62_[+2(2.11e-06)]_20 chrVI:106602-106841 5.26e-01 100 chrVI:137241-137806 7.18e-10 21_[+1(5.66e-08)]_18_[-2(9.49e-09)]_\ 22 chrVI:157714-158261 7.47e-04 44_[-2(1.79e-07)]_38 chrVI:161999-162404 5.02e-01 100 chrVI:167174-167699 3.27e-01 100 chrVI:180689-181258 5.56e-07 59_[+1(5.21e-11)]_20 chrVI:191328-191822 3.04e-07 62_[-2(4.88e-10)]_20 chrVI:204741-205215 1.61e-13 4_[+1(1.08e-10)]_17_[-2(5.27e-09)]_\ 40 chrVI:210424-210893 5.42e-05 19_[+1(5.66e-08)]_60 chrVI:220770-222116 4.09e-01 100 chrVI:223319-224180 3.77e-02 100 chrVI:226535-226951 1.14e-11 3_[+1(2.15e-10)]_17_[-2(4.30e-08)]_\ 41 chrVI:269249-270160 8.17e-01 100 chrVII:9-1311 7.53e-01 100 chrVII:1679-1873 3.78e-01 100 chrVII:23930-25457 4.37e-01 100 chrVII:73689-74169 6.66e-03 5_[-2(7.50e-06)]_44_[+2(1.15e-05)]_\ 15 chrVII:110431-110954 1.04e-04 20_[-3(4.12e-08)]_55 chrVII:115236-115803 4.45e-06 26_[+2(3.04e-08)]_56 chrVII:122046-122538 1.14e-11 34_[+2(4.30e-08)]_17_[-1(2.15e-10)]_\ 10 chrVII:148109-149552 3.08e-01 100 chrVII:185379-185992 4.69e-01 100 chrVII:205308-205778 3.20e-04 35_[+2(9.12e-08)]_47 chrVII:254095-254737 6.80e-01 100 chrVII:276883-278714 7.17e-01 100 chrVII:287050-287740 5.57e-05 13_[+1(5.66e-08)]_66 chrVII:291583-291947 8.84e-01 100 chrVII:310467-312229 6.23e-01 100 chrVII:319578-320125 5.67e-04 21_[-1(4.05e-07)]_58 chrVII:328351-328912 3.20e-12 10_[+3(6.75e-09)]_8_[-1(8.58e-10)]_\ 36 chrVII:329131-329729 5.58e-01 100 chrVII:364894-366660 9.96e-01 100 chrVII:371205-371504 1.25e-01 100 chrVII:400851-401797 2.26e-01 100 chrVII:405265-405768 1.32e-10 12_[+3(2.33e-08)]_8_[-1(3.71e-09)]_\ 34 chrVII:412086-412586 6.66e-10 16_[+1(1.96e-09)]_18_[-2(1.35e-07)]_\ 27 chrVII:422685-423497 9.27e-05 58_[+2(9.12e-08)]_24 chrVII:437536-439944 9.56e-01 100 chrVII:440485-443102 3.61e-01 100 chrVII:479282-482867 2.43e-01 100 chrVII:483431-483671 7.34e-01 100 chrVII:531388-531812 2.75e-09 35_[+1(8.03e-05)]_12_[+3(1.01e-10)]_\ 7 chrVII:533847-535239 7.81e-01 100 chrVII:541614-542217 9.85e-07 26_[-1(8.58e-10)]_53 chrVII:544301-544893 1.88e-12 38_[+1(3.26e-08)]_8_[-3(1.01e-10)]_\ 8 chrVII:555072-556680 8.39e-01 100 chrVII:561020-561964 9.98e-01 100 chrVII:609337-609908 6.42e-01 100 chrVII:648768-649386 5.33e-01 100 chrVII:661507-661975 6.31e-05 66_[+3(6.32e-08)]_9 chrVII:700320-701260 6.35e-01 100 chrVII:706903-707357 2.14e-05 36_[+1(2.36e-07)]_43 chrVII:726283-726782 9.01e-01 100 chrVII:726977-728169 4.70e-01 100 chrVII:730902-731440 7.18e-10 23_[+2(9.49e-09)]_18_[-1(5.66e-08)]_\ 20 chrVII:736186-736571 2.22e-10 20_[+3(2.33e-08)]_8_[-1(3.71e-09)]_\ 26 chrVII:738890-739457 1.53e-13 6_[+2(6.03e-10)]_18_[-1(1.82e-10)]_\ 37 chrVII:774110-774651 1.61e-13 26_[+2(5.27e-09)]_17_[-1(1.08e-10)]_\ 18 chrVII:779372-779896 1.54e-11 40_[+3(1.43e-08)]_8_[-1(4.75e-10)]_\ 6 chrVII:788321-788778 9.47e-01 100 chrVII:794170-794622 6.99e-06 78_[+2(1.94e-09)]_4 chrVII:823266-823696 6.35e-04 58_[+2(1.35e-07)]_24 chrVII:828458-829036 1.32e-10 34_[+1(3.71e-09)]_8_[-3(2.33e-08)]_\ 12 chrVII:845382-845899 3.10e-04 66_[+2(8.18e-07)]_16 chrVII:856688-856998 3.59e-03 36_[+3(4.78e-05)]_39 chrVII:857213-857660 1.26e-04 79_[-2(9.12e-08)]_3 chrVII:876032-876730 2.91e-05 70_[+2(4.30e-08)]_12 chrVII:878594-879037 1.28e-03 16_[-3(2.12e-06)]_59 chrVII:882387-883943 6.10e-01 100 chrVII:919914-920264 9.97e-01 100 chrVII:930642-931252 5.56e-07 64_[+1(5.21e-11)]_15 chrVII:1000316-1000630 4.70e-01 100 chrVII:1003998-1004454 7.99e-05 48_[+3(6.32e-08)]_27 chrVIII:34478-36386 1.44e-02 100 chrVIII:62517-62951 6.52e-01 100 chrVIII:74915-76219 1.27e-01 100 chrVIII:85165-85564 7.81e-05 31_[-2(1.35e-07)]_51 chrVIII:103850-104721 1.27e-01 100 chrVIII:115921-116441 2.27e-05 22_[-2(4.49e-09)]_60 chrVIII:125898-127062 9.87e-01 100 chrVIII:132855-133334 4.31e-06 37_[-2(4.88e-10)]_45 chrVIII:134083-134549 1.13e-09 63_[+3(5.12e-12)]_12 chrVIII:145906-146464 8.26e-01 100 chrVIII:148939-149317 3.06e-01 100 chrVIII:174994-175384 8.86e-02 100 chrVIII:237741-238144 5.11e-04 21_[-2(1.79e-07)]_61 chrVIII:296743-297281 2.59e-01 100 chrVIII:353368-353620 6.80e-01 100 chrVIII:358282-358789 3.76e-08 1_[+1(7.34e-08)]_36_[-2(1.79e-07)]_\ 24 chrVIII:381507-383387 3.41e-01 100 chrVIII:388662-389226 4.66e-09 7_[+1(1.31e-09)]_47_[-2(2.11e-06)]_\ 7 chrVIII:410993-411668 3.13e-01 100 chrVIII:451312-452998 4.99e-01 100 chrVIII:455600-455877 3.95e-01 100 chrVIII:466728-467364 4.94e-09 2_[+3(6.32e-08)]_8_[-1(3.58e-08)]_\ 44 chrVIII:475467-475919 6.70e-07 71_[+1(9.07e-11)]_8 chrVIII:505317-506230 1.80e-01 100 chrVIII:555807-557196 2.67e-01 100 chrVIII:562290-562580 5.94e-01 100 chrX:58950-59554 1.25e-01 50_[-3(7.09e-05)]_25 chrX:73364-75719 7.72e-02 100 chrX:90025-90451 7.19e-01 100 chrX:115710-116204 3.20e-12 40_[+1(8.58e-10)]_8_[-3(6.75e-09)]_\ 6 chrX:139157-140443 3.96e-01 100 chrX:157429-157918 5.68e-01 100 chrX:160046-160283 7.89e-01 100 chrX:197131-197598 1.61e-13 7_[+1(1.08e-10)]_17_[-2(5.27e-09)]_\ 37 chrX:204513-204969 1.46e-07 52_[+3(1.01e-10)]_23 chrX:227758-228587 8.02e-01 100 chrX:233685-234205 5.64e-06 51_[+2(3.28e-07)]_31 chrX:354012-354564 5.42e-05 64_[-1(5.66e-08)]_15 chrX:355123-355727 1.32e-10 7_[+3(2.33e-08)]_8_[-1(3.71e-09)]_\ 39 chrX:374214-374827 1.32e-10 44_[+1(3.71e-09)]_8_[-3(2.33e-08)]_\ 2 chrX:378136-378553 5.39e-04 73_[+2(1.35e-07)]_9 chrX:390830-391669 9.99e-01 100 chrX:391829-392127 4.70e-01 100 chrX:396431-397042 3.81e-07 48_[+1(5.21e-11)]_31 chrX:414724-415292 1.14e-11 15_[+2(4.30e-08)]_17_[-1(2.15e-10)]_\ 29 chrX:415714-416265 2.45e-07 [+1(5.66e-08)]_42_[-3(2.12e-06)]_12 chrX:422708-423236 8.36e-08 22_[+2(6.13e-07)]_17_[-1(1.64e-07)]_\ 22 chrX:424264-424721 1.43e-07 6_[-3(6.51e-05)]_16_[-2(6.14e-09)]_\ 35 chrX:517653-518096 4.99e-02 100 chrX:523857-524311 6.43e-07 33_[-2(4.88e-10)]_49 chrX:531547-532168 3.30e-11 28_[+2(8.18e-07)]_15_[-1(5.21e-11)]_\ 18 chrX:538340-538749 8.61e-06 69_[+3(4.39e-08)]_6 chrX:541282-541818 1.88e-12 16_[+3(1.01e-10)]_8_[-1(3.26e-08)]_\ 30 chrX:542763-543279 2.67e-01 100 chrX:545432-545691 2.19e-01 100 chrX:607708-609096 4.63e-01 100 chrX:617711-618188 1.55e-06 27_[+2(1.36e-09)]_55 chrX:651213-651622 8.12e-01 100 chrX:663700-664288 6.10e-01 100 chrX:690576-690858 3.62e-01 100 chrX:702412-703654 6.10e-01 100 chrX:745242-745745 4.51e-07 4_[+2(2.50e-06)]_8_[+3(4.68e-08)]_\ 45 chrXI:0-1076 6.92e-02 100 chrXI:46440-47021 1.26e-05 63_[+1(2.89e-09)]_16 chrXI:67725-68052 6.58e-01 100 chrXI:74389-74926 6.06e-10 24_[+2(9.49e-09)]_18_[-1(5.66e-08)]_\ 19 chrXI:83951-84476 5.51e-06 52_[+2(6.14e-09)]_30 chrXI:99734-99966 7.30e-01 100 chrXI:108330-110143 8.06e-01 100 chrXI:140783-141457 9.16e-01 100 chrXI:158121-159228 1.09e-01 14_[+2(4.54e-05)]_68 chrXI:162278-162773 2.22e-10 20_[+1(3.71e-09)]_8_[-3(2.33e-08)]_\ 26 chrXI:163268-164491 5.11e-02 100 chrXI:202813-203307 2.19e-07 31_[-1(2.15e-10)]_48 chrXI:219678-220095 1.71e-06 66_[+2(5.27e-09)]_16 chrXI:302672-303246 1.28e-03 17_[+3(2.12e-06)]_58 chrXI:307869-308427 6.16e-06 54_[+1(1.96e-09)]_25 chrXI:313195-313673 2.41e-08 25_[+1(4.05e-07)]_8_[-3(4.12e-08)]_\ 21 chrXI:322433-322755 2.24e-01 100 chrXI:326084-327520 8.51e-02 100 chrXI:379409-379920 1.53e-04 73_[+2(1.35e-07)]_9 chrXI:382176-382464 2.55e-03 77_[-2(3.96e-05)]_5 chrXI:430827-431692 8.11e-01 100 chrXI:458359-458918 1.82e-01 100 chrXI:490724-491237 7.13e-06 45_[+2(3.28e-07)]_37 chrXI:513145-513609 1.88e-12 13_[+1(3.26e-08)]_8_[-3(1.01e-10)]_\ 33 chrXI:517774-518232 1.61e-13 42_[+2(5.27e-09)]_17_[-1(1.08e-10)]_\ 2 chrXI:578776-579297 4.85e-06 44_[-1(2.54e-09)]_35 chrXI:617736-619253 6.85e-01 100 chrXI:665680-666798 5.42e-01 100 chrXII:5-241 7.42e-01 100 chrXII:5470-5923 1.71e-01 100 chrXII:11013-11986 1.58e-04 50_[-3(4.68e-08)]_25 chrXII:47545-49143 4.59e-01 100 chrXII:84086-84470 1.46e-01 100 chrXII:92294-92927 3.99e-06 60_[-1(1.31e-09)]_19 chrXII:167756-168268 3.68e-06 37_[-2(4.88e-10)]_45 chrXII:198687-199659 1.71e-01 100 chrXII:214688-215163 1.59e-14 16_[+1(4.27e-11)]_17_[-2(1.94e-09)]_\ 28 chrXII:232169-234201 3.78e-02 58_[-1(5.05e-05)]_21 chrXII:241588-242025 7.14e-01 100 chrXII:262638-264064 2.63e-01 100 chrXII:282451-283868 4.69e-01 100 chrXII:348132-348703 7.81e-01 100 chrXII:366012-366874 9.40e-03 66_[-1(7.06e-06)]_13 chrXII:368658-370260 3.10e-01 100 chrXII:370595-370948 2.77e-01 100 chrXII:374182-374709 2.22e-04 2_[-1(7.99e-08)]_77 chrXII:424146-424497 3.26e-01 100 chrXII:426880-427464 1.88e-12 18_[+3(1.01e-10)]_8_[-1(3.26e-08)]_\ 28 chrXII:448479-449010 1.13e-01 100 chrXII:459611-460110 2.76e-01 100 chrXII:460283-460682 8.59e-01 100 chrXII:468763-468979 5.03e-02 61_[+2(8.72e-05)]_21 chrXII:489279-489587 7.37e-02 35_[+2(8.72e-05)]_47 chrXII:498329-499852 5.65e-01 100 chrXII:522124-522472 9.77e-01 100 chrXII:592363-593104 8.66e-01 100 chrXII:605130-605628 9.52e-07 77_[-2(1.22e-06)]_5 chrXII:628154-628653 3.89e-04 37_[+2(9.12e-08)]_45 chrXII:649689-651274 5.30e-02 18_[-2(6.62e-05)]_64 chrXII:656687-657212 1.61e-13 43_[+1(1.08e-10)]_17_[-2(5.27e-09)]_\ 1 chrXII:673240-674766 9.27e-01 100 chrXII:687673-688146 6.66e-10 8_[+1(1.96e-09)]_18_[-2(1.35e-07)]_\ 35 chrXII:710311-710923 1.77e-01 100 chrXII:712831-713674 7.77e-01 100 chrXII:731879-732335 8.58e-07 40_[+2(1.36e-09)]_42 chrXII:734521-735008 7.16e-01 100 chrXII:780783-781883 3.43e-02 42_[-1(6.00e-05)]_37 chrXII:784080-784595 2.31e-08 74_[+2(4.88e-10)]_8 chrXII:795574-797383 1.33e-01 100 chrXII:818475-819659 9.67e-01 100 chrXII:837642-839392 4.88e-03 74_[+3(1.31e-05)]_1 chrXII:875196-875665 9.85e-12 3_[+2(3.04e-08)]_40_[-1(2.54e-09)]_\ 18 chrXII:897667-899609 7.10e-01 100 chrXII:903403-903973 1.99e-01 100 chrXII:921700-922596 1.47e-01 100 chrXII:932062-932524 8.58e-01 100 chrXII:962809-963342 5.19e-06 4_[-2(6.14e-09)]_78 chrXII:975782-976282 2.62e-09 9_[+1(5.66e-08)]_18_[-2(9.49e-09)]_\ 34 chrXII:1012106-1012436 5.33e-03 100 chrXII:1017788-1019420 5.17e-01 100 chrXII:1028184-1028597 9.12e-01 100 chrXII:1051838-1052402 1.53e-13 9_[+1(1.82e-10)]_18_[-2(6.03e-10)]_\ 34 chrXII:1064071-1065374 5.41e-01 100 chrXIII:20-204 5.23e-01 100 chrXIII:5329-5769 5.16e-01 100 chrXIII:23746-25903 4.61e-01 100 chrXIII:91593-92137 8.36e-01 100 chrXIII:123238-124846 9.04e-01 100 chrXIII:131429-132125 9.41e-01 100 chrXIII:145869-147241 3.27e-01 100 chrXIII:168584-169055 2.67e-01 100 chrXIII:183756-184161 3.10e-04 34_[-2(8.18e-07)]_48 chrXIII:195908-196408 3.80e-04 36_[-2(2.11e-06)]_46 chrXIII:224050-224419 8.58e-01 100 chrXIII:225271-225751 2.00e-01 100 chrXIII:258963-259433 4.26e-10 18_[+1(6.97e-07)]_26_[-2(4.88e-10)]_\ 17 chrXIII:267891-268587 5.77e-01 100 chrXIII:290578-291577 3.61e-01 100 chrXIII:296583-298952 5.09e-01 100 chrXIII:302819-303108 4.04e-01 100 chrXIII:320922-321330 2.07e-06 79_[+1(1.08e-10)] chrXIII:352064-352520 7.21e-04 45_[+2(1.79e-07)]_37 chrXIII:362886-363331 2.41e-08 14_[+3(4.12e-08)]_8_[-1(4.05e-07)]_\ 32 chrXIII:372204-372719 6.66e-10 42_[+1(1.96e-09)]_18_[-2(1.35e-07)]_\ 1 chrXIII:379082-379658 6.45e-04 54_[-3(2.12e-06)]_21 chrXIII:420309-420853 5.86e-06 65_[+1(1.96e-09)]_14 chrXIII:463281-463886 1.88e-12 29_[+3(1.01e-10)]_8_[-1(3.26e-08)]_\ 17 chrXIII:480391-480925 1.14e-11 21_[+1(2.15e-10)]_17_[-2(4.30e-08)]_\ 23 chrXIII:504681-505244 1.82e-01 100 chrXIII:549843-551790 9.99e-01 100 chrXIII:551949-553213 7.30e-03 49_[+1(8.28e-05)]_30 chrXIII:572689-573213 3.93e-04 28_[-2(6.13e-07)]_54 chrXIII:586414-586930 6.66e-10 22_[+1(1.96e-09)]_18_[-2(1.35e-07)]_\ 21 chrXIII:626218-626894 1.06e-01 6_[-1(9.89e-05)]_73 chrXIII:632178-634828 9.90e-01 100 chrXIII:650755-652902 8.73e-01 100 chrXIII:731931-733525 4.47e-02 100 chrXIII:747751-748162 2.15e-05 23_[-3(2.33e-08)]_52 chrXIII:753333-754868 5.30e-01 100 chrXIII:768188-768662 1.61e-13 2_[+1(1.08e-10)]_17_[-2(5.27e-09)]_\ 42 chrXIII:807800-808569 6.40e-01 100 chrXIII:837710-838251 5.42e-05 56_[-1(5.66e-08)]_23 chrXIII:872682-872945 9.48e-02 100 chrXIII:923258-924379 1.73e-01 100 chrXIV:6464-7210 1.14e-05 50_[-3(2.80e-09)]_25 chrXIV:61970-64548 6.35e-01 100 chrXIV:88932-89669 9.48e-01 100 chrXIV:96035-96553 1.54e-11 5_[+1(4.75e-10)]_8_[-3(1.43e-08)]_\ 41 chrXIV:102493-103105 4.12e-05 10_[-1(5.66e-08)]_69 chrXIV:104577-105110 6.39e-10 19_[+2(4.49e-09)]_17_[-1(2.43e-08)]_\ 25 chrXIV:241373-241776 4.49e-01 100 chrXIV:330601-331134 8.41e-01 100 chrXIV:374676-375099 2.56e-04 39_[+2(1.79e-07)]_43 chrXIV:442809-444837 5.08e-01 100 chrXIV:495186-495791 6.27e-01 100 chrXIV:499275-500741 6.03e-01 100 chrXIV:546939-547408 1.59e-06 43_[-1(1.31e-09)]_36 chrXIV:560114-561013 7.43e-01 100 chrXIV:567866-568540 4.15e-06 34_[-1(1.31e-09)]_45 chrXIV:569708-570139 1.53e-13 2_[+1(1.82e-10)]_18_[-2(6.03e-10)]_\ 41 chrXIV:575154-576120 7.27e-01 100 chrXIV:602126-602534 1.53e-13 39_[+2(6.03e-10)]_18_[-1(1.82e-10)]_\ 4 chrXIV:631700-632136 6.72e-02 23_[-2(8.42e-05)]_59 chrXIV:632391-632898 7.18e-10 12_[+2(9.49e-09)]_18_[-1(5.66e-08)]_\ 31 chrXIV:715667-716594 9.91e-01 100 chrXIV:725986-726424 4.12e-06 36_[-2(6.14e-09)]_46 chrXIV:783450-784325 1.13e-05 15_[+3(1.99e-08)]_60 chrXV:1-1024 4.75e-01 100 chrXV:79724-80147 8.61e-01 100 chrXV:92105-94859 5.91e-01 100 chrXV:109533-110031 1.47e-01 100 chrXV:110823-111275 4.50e-05 [-3(1.43e-08)]_75 chrXV:113559-113978 1.36e-01 100 chrXV:159288-160715 2.81e-01 100 chrXV:161084-161451 9.72e-01 100 chrXV:167958-168599 1.00e+00 100 chrXV:216264-216673 2.22e-01 100 chrXV:226479-226891 3.10e-04 20_[-2(8.18e-07)]_62 chrXV:228127-228592 2.62e-09 29_[+2(9.49e-09)]_18_[-1(5.66e-08)]_\ 14 chrXV:253142-254729 7.89e-02 100 chrXV:274449-275069 2.09e-03 34_[-1(1.61e-05)]_45 chrXV:281958-282419 3.30e-11 33_[+2(8.18e-07)]_15_[-1(5.21e-11)]_\ 13 chrXV:288008-288436 5.46e-05 78_[-1(5.66e-08)]_1 chrXV:300857-301357 1.27e-03 47_[+2(2.11e-06)]_35 chrXV:340127-340582 2.38e-09 3_[+1(7.99e-08)]_17_[-2(3.28e-07)]_\ 41 chrXV:353849-354443 9.39e-01 100 chrXV:438439-438966 4.85e-06 56_[-1(2.54e-09)]_23 chrXV:444618-446138 8.69e-01 100 chrXV:464234-464720 1.27e-03 30_[+2(2.11e-06)]_52 chrXV:487212-487686 5.10e-05 47_[+2(9.49e-09)]_35 chrXV:505105-505487 1.21e-01 100 chrXV:571730-572322 2.50e-04 23_[-1(3.26e-08)]_56 chrXV:594190-594681 3.69e-05 6_[-3(1.16e-07)]_69 chrXV:663479-664108 1.53e-05 77_[+1(1.96e-09)]_2 chrXV:677912-679202 9.64e-01 100 chrXV:709997-710746 1.90e-01 100 chrXV:779670-780952 7.99e-01 100 chrXV:832370-832786 7.38e-01 100 chrXV:853901-854434 3.24e-07 78_[+1(4.27e-11)]_1 chrXV:866522-868101 9.89e-01 100 chrXV:901412-901748 9.72e-01 100 chrXV:968117-968432 3.85e-03 5_[+2(4.38e-05)]_77 chrXV:976171-976677 1.59e-04 54_[+2(6.13e-07)]_28 chrXV:978799-979144 3.16e-01 100 chrXV:980480-981014 1.81e-06 60_[-1(1.31e-09)]_19 chrXV:1003938-1004888 9.96e-01 100 chrXV:1025692-1026082 1.02e-01 100 chrXV:1027879-1029297 6.76e-01 100 chrXV:1070869-1071158 9.32e-01 100 chrXV:1091107-1091291 6.89e-01 100 chrXVI:55837-56497 9.40e-05 60_[+1(5.66e-08)]_19 chrXVI:75458-76915 1.81e-03 26_[+2(4.19e-06)]_56 chrXVI:134770-135866 1.07e-03 100 chrXVI:172717-174120 9.64e-01 100 chrXVI:188562-188968 2.18e-02 100 chrXVI:193518-194620 4.04e-01 100 chrXVI:209979-210497 3.20e-12 12_[+1(8.58e-10)]_8_[-3(6.75e-09)]_\ 34 chrXVI:279965-280229 8.97e-02 100 chrXVI:280669-282928 3.30e-01 100 chrXVI:302470-304321 4.89e-04 45_[-2(2.83e-05)]_37 chrXVI:338746-339114 5.90e-02 100 chrXVI:378646-379022 4.59e-01 100 chrXVI:404559-406037 9.31e-01 100 chrXVI:406205-407751 9.80e-01 100 chrXVI:435669-436204 2.14e-05 15_[+1(2.36e-07)]_64 chrXVI:520141-520527 2.14e-01 100 chrXVI:560004-560504 3.76e-08 2_[+1(7.34e-08)]_36_[-2(1.79e-07)]_\ 23 chrXVI:572045-572571 3.30e-11 18_[+2(8.18e-07)]_15_[-1(5.21e-11)]_\ 28 chrXVI:575195-575555 9.76e-01 100 chrXVI:581811-582393 1.14e-11 17_[+2(4.30e-08)]_17_[-1(2.15e-10)]_\ 27 chrXVI:622288-622861 3.76e-08 24_[+1(7.34e-08)]_36_[-2(1.79e-07)]_\ 1 chrXVI:689357-689862 2.19e-09 13_[+2(4.88e-10)]_26_[-1(1.96e-06)]_\ 22 chrXVI:699885-700706 9.52e-01 100 chrXVI:718432-719437 7.06e-01 100 chrXVI:731590-732296 2.17e-01 100 chrXVI:744058-744603 1.17e-08 12_[+3(6.32e-08)]_8_[-1(1.64e-07)]_\ 34 chrXVI:768994-769511 9.85e-12 13_[+1(2.54e-09)]_40_[-2(3.04e-08)]_\ 8 chrXVI:775627-776097 1.00e+00 100 chrXVI:794251-795988 1.12e-01 100 chrXVI:810429-811079 6.41e-05 15_[-1(5.66e-08)]_64 chrXVI:819330-819748 1.14e-06 47_[+2(6.03e-10)]_35 chrXVI:856758-857121 1.61e-13 20_[+2(5.27e-09)]_17_[-1(1.08e-10)]_\ 24 chrXVI:860133-860648 3.30e-11 46_[+2(8.18e-07)]_15_[-1(5.21e-11)] chrXVI:866456-866882 8.47e-01 100 chrXVI:880033-880588 1.05e-08 44_[+1(1.82e-10)]_35 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************