******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--CAT8/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrI:3-1086 1.0000 100 chrI:71893-73637 1.0000 100 chrI:81853-82327 1.0000 100 chrI:138916-139542 1.0000 100 chrI:142090-143621 1.0000 100 chrI:166026-166810 1.0000 100 chrI:180898-181509 1.0000 100 chrI:182349-182811 1.0000 100 chrI:183002-183174 1.0000 100 chrI:229132-230194 1.0000 100 chrII:9315-9979 1.0000 100 chrII:36166-36638 1.0000 100 chrII:44976-45392 1.0000 100 chrII:45571-46303 1.0000 100 chrII:60702-61433 1.0000 100 chrII:87972-88576 1.0000 100 chrII:88951-90006 1.0000 100 chrII:165052-165447 1.0000 100 chrII:165619-165779 1.0000 100 chrII:167838-168941 1.0000 100 chrII:181285-181669 1.0000 100 chrII:196840-197884 1.0000 100 chrII:226831-227665 1.0000 100 chrII:266063-266750 1.0000 100 chrII:326575-327150 1.0000 100 chrII:332295-333502 1.0000 100 chrII:347360-347930 1.0000 100 chrII:350563-351177 1.0000 100 chrII:405222-405383 1.0000 100 chrII:405562-406212 1.0000 100 chrII:415470-415951 1.0000 100 chrII:476809-477748 1.0000 100 chrII:504466-504727 1.0000 100 chrII:544456-544797 1.0000 100 chrII:592265-593320 1.0000 100 chrII:604081-607045 1.0000 100 chrII:642834-643411 1.0000 100 chrII:644974-645497 1.0000 100 chrII:680043-682207 1.0000 100 chrIII:0-1478 1.0000 100 chrIII:11056-11548 1.0000 100 chrIII:14014-16480 1.0000 100 chrIII:58739-59006 1.0000 100 chrIII:78430-78765 1.0000 100 chrIII:81983-82769 1.0000 100 chrIII:123335-123824 1.0000 100 chrIII:127513-127877 1.0000 100 chrIII:142490-143020 1.0000 100 chrIII:162469-163144 1.0000 100 chrIII:163305-163901 1.0000 100 chrIII:168118-168631 1.0000 100 chrIII:177073-178822 1.0000 100 chrIII:227754-228219 1.0000 100 chrIII:238458-238930 1.0000 100 chrIII:292310-293067 1.0000 100 chrIII:294624-295916 1.0000 100 chrIII:315627-316619 1.0000 100 chrIV:27-338 1.0000 100 chrIV:83342-83812 1.0000 100 chrIV:117054-118252 1.0000 100 chrIV:118431-119010 1.0000 100 chrIV:129914-131197 1.0000 100 chrIV:217149-218055 1.0000 100 chrIV:220855-222408 1.0000 100 chrIV:229390-230708 1.0000 100 chrIV:307606-308954 1.0000 100 chrIV:321538-322020 1.0000 100 chrIV:340153-341651 1.0000 100 chrIV:358078-358489 1.0000 100 chrIV:359103-359864 1.0000 100 chrIV:410122-410705 1.0000 100 chrIV:411216-411740 1.0000 100 chrIV:433962-434627 1.0000 100 chrIV:437477-438122 1.0000 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chrIV:1352318-1352749 1.0000 100 chrIV:1354465-1356085 1.0000 100 chrIV:1359197-1361311 1.0000 100 chrIV:1401238-1401895 1.0000 100 chrIV:1450272-1450421 1.0000 100 chrIV:1450687-1451390 1.0000 100 chrIV:1461414-1462225 1.0000 100 chrIV:1489093-1489920 1.0000 100 chrIV:1524050-1525652 1.0000 100 chrIX:1-215 1.0000 100 chrIX:67868-68811 1.0000 100 chrIX:98224-100043 1.0000 100 chrIX:131804-132100 1.0000 100 chrIX:174792-175460 1.0000 100 chrIX:183134-183734 1.0000 100 chrIX:197040-197766 1.0000 100 chrIX:210511-211071 1.0000 100 chrIX:232713-233040 1.0000 100 chrIX:248627-249411 1.0000 100 chrIX:254213-254572 1.0000 100 chrIX:255311-258178 1.0000 100 chrIX:299994-300824 1.0000 100 chrIX:316096-317660 1.0000 100 chrIX:324126-324652 1.0000 100 chrIX:325505-326141 1.0000 100 chrIX:336114-336683 1.0000 100 chrIX:370162-370652 1.0000 100 chrIX:382096-382616 1.0000 100 chrIX:438521-439887 1.0000 100 chrV:6142-6705 1.0000 100 chrV:13310-13820 1.0000 100 chrV:14045-14363 1.0000 100 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chrXV:1003803-1004990 1.0000 100 chrXV:1025670-1026195 1.0000 100 chrXV:1027591-1029141 1.0000 100 chrXV:1091123-1091290 1.0000 100 chrXVI:55792-56524 1.0000 100 chrXVI:75395-76715 1.0000 100 chrXVI:135227-135868 1.0000 100 chrXVI:172804-174147 1.0000 100 chrXVI:188523-188979 1.0000 100 chrXVI:209851-210582 1.0000 100 chrXVI:279917-280235 1.0000 100 chrXVI:280709-282956 1.0000 100 chrXVI:302603-303282 1.0000 100 chrXVI:338562-339202 1.0000 100 chrXVI:340554-340751 1.0000 100 chrXVI:378619-379240 1.0000 100 chrXVI:404518-406019 1.0000 100 chrXVI:406169-406859 1.0000 100 chrXVI:435616-436240 1.0000 100 chrXVI:515028-517054 1.0000 100 chrXVI:520091-520672 1.0000 100 chrXVI:560017-560520 1.0000 100 chrXVI:572029-572560 1.0000 100 chrXVI:581820-582364 1.0000 100 chrXVI:622322-622839 1.0000 100 chrXVI:627348-627688 1.0000 100 chrXVI:653625-654670 1.0000 100 chrXVI:689334-689880 1.0000 100 chrXVI:699890-700701 1.0000 100 chrXVI:731899-732317 1.0000 100 chrXVI:743761-744591 1.0000 100 chrXVI:768881-769483 1.0000 100 chrXVI:775612-776195 1.0000 100 chrXVI:794451-796059 1.0000 100 chrXVI:810422-810919 1.0000 100 chrXVI:819297-819875 1.0000 100 chrXVI:856742-857120 1.0000 100 chrXVI:860097-860655 1.0000 100 chrXVI:866476-866854 1.0000 100 chrXVI:880117-880559 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--CAT8/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--CAT8/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--CAT8/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 558 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 55800 N= 558 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.299 C 0.201 G 0.201 T 0.299 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--CAT8/background): A 0.314 C 0.186 G 0.186 T 0.314 ******************************************************************************** ******************************************************************************** MOTIF SSGGRATCGAACCSSBGAYCT MEME-1 width = 21 sites = 112 llr = 1848 E-value = 5.1e-370 ******************************************************************************** -------------------------------------------------------------------------------- Motif SSGGRATCGAACCSSBGAYCT MEME-1 Description -------------------------------------------------------------------------------- Simplified A :12:64:::aa::12:26::: pos.-specific C 531::2:7:::a8533:2563 probability G 357a42::a:::135481122 matrix T 21:::2a3::::21:3:2425 bits 2.4 * * * 2.2 * * * 1.9 * * * 1.7 * * **** Relative 1.5 * ****** * Entropy 1.2 ** ******* * (23.8 bits) 1.0 *** ******* * 0.7 ***** ******* * * ** 0.5 ***** *********** *** 0.2 ***** *************** 0.0 --------------------- Multilevel CGGGAATCGAACCCGGGACCT consensus GCA GT T GCCA TGC sequence AT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSGGRATCGAACCSSBGAYCT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrIII:123335-123824 + 57 1.81e-13 TGGGGCGAGC CGGGACTCGAACCCGGGACCT CCCGCACCCT chrXVI:572029-572560 - 66 4.85e-11 TTGCGCAAGC CCGGAATCGAACCGGGGGCCC AACGATGGCA chrX:531508-532233 - 49 4.85e-11 CTGCGCAAGC CCGGAATCGAACCGGGGGCCC AACGATGGCA chrVI:180640-181287 + 70 4.85e-11 CTGCGCAAGC CCGGAATCGAACCGGGGGCCC AACGATGGCA chrIV:83342-83812 - 62 4.85e-11 TTGCGCAAGC CCGGAATCGAACCGGGGGCCC AACGATGGCA chrIII:142490-143020 + 5 4.85e-11 AAGC CCGGAATCGAACCGGGGGCCC AACGATGGCA chrXV:594033-594700 + 47 8.91e-11 ATGCGCAAGC CGGGAATCGAACCCGGGCCTC ATGCTTGGGA chrXV:854005-854436 + 26 1.08e-10 TTGGACGCAA CCGGAATCGAACCGATGACCT CTTCCTTGCA chrXII:214663-215191 + 15 1.08e-10 ATGGACGCAA CCGGAATCGAACCGATGACCT CTTCCTTGCA chrXVI:880117-880559 + 17 2.25e-10 ATGGTCTCTA GCGGGATCGAACCGCTGATCC CCGCGTTATT chrXVI:819297-819875 - 37 2.25e-10 ATGGTCTCTA GCGGGATCGAACCGCTGATCC CCGCGTTATT chrXIV:602155-602565 - 46 2.25e-10 ATGGTCTCTA GCGGGATCGAACCGCTGATCC CCGCGTTATT chrXIV:569613-570142 + 49 2.25e-10 ATGGTCTCTA GCGGGATCGAACCGCTGATCC CCGCGTTATT chrV:443000-443510 + 6 2.25e-10 CTCTA GCGGGATCGAACCGCTGATCC CCGCGTTATT chrIX:183134-183734 + 65 2.25e-10 GTGGTCTCTA GCGGGATCGAACCGCTGATCC CCGCGTTATT chrIV:667762-668243 + 64 2.25e-10 ATGGTCTCTA GCGGGATCGAACCGCTGATCC CCGCGTTATT chrVIII:475531-475931 + 34 2.69e-10 ATGTTCCAAC CGAGGATCGAACTCGGGACCT TTGCCGTGTG chrIV:1075313-1075739 + 5 2.69e-10 CAAC CGAGGATCGAACTCGGGACCT TTGCCGTGTG chrXVI:581820-582364 - 63 3.77e-10 AAGCCCTGTA GGGGGCTCGAACCCCTAACCT TATGATTAAG chrXIII:480387-480889 + 42 3.77e-10 AAGCCCTGTA GGGGGCTCGAACCCCTAACCT TATGATTAAG chrXI:202823-203318 - 22 3.77e-10 AAGCCCTGTA GGGGGCTCGAACCCCTAACCT TATGATTAAG chrX:414737-415293 - 44 3.77e-10 TAGCCCTGTA GGGGGCTCGAACCCCTAACCT TATGATTAAG chrVII:185459-185979 + 54 3.77e-10 TAGCCCTGTA GGGGGCTCGAACCCCTAACCT TATGATTAAG chrVII:122093-122571 - 30 3.77e-10 TAGCCCTGTA GGGGGCTCGAACCCCTAACCT TATGATTAAG chrVI:226432-226971 + 46 3.77e-10 AAGCCCTGTA GGGGGCTCGAACCCCTAACCT TATGATTAAG chrV:135139-135743 + 43 3.77e-10 AAGCCCTGTA GGGGGCTCGAACCCCTAACCT TATGATTAAG chrIV:1201500-1202128 - 29 3.77e-10 TAGCCCTGTA GGGGGCTCGAACCCCTAACCT TATGATTAAG chrXVI:856742-857120 - 64 6.17e-10 ATGGACGAGT CCGGAATCGAACCGGAGACCT CTCCCATGCT chrXII:656652-657213 + 61 6.17e-10 TTGGACGAGT CCGGAATCGAACCGGAGACCT CTCCCATGCT chrIV:410122-410705 - 59 6.17e-10 TTGGACGAGT CCGGAATCGAACCGGAGACCT CTCCCATGCT chrXVI:209851-210582 + 35 9.83e-10 ACTCCGATAC GGGGAGTCGAACCCCGGTCTC CACGGTGAAA chrXIII:290498-291141 - 74 9.83e-10 CGCTAC GGGGAGTCGAACCCCGGTCTC CACGGTGAAA chrVII:541576-542175 - 67 9.83e-10 ACTCCGATAC GGGGAGTCGAACCCCGGTCTC CACGGTGAAA chrIV:1016940-1017543 + 25 9.83e-10 ACTCCGAAGC GGGGAGTCGAACCCCGGTCTC CACGGTGAGA chrII:644974-645497 - 24 9.83e-10 ACTCCGATAC GGGGAGTCGAACCCCGGTCTC CACGGTGAAA chrV:250113-250611 - 16 1.14e-09 AAGGTCCTAC CCGGATTCGAACCGGGGTTGT CCGGATCAAA chrV:130834-131412 + 18 1.14e-09 TAGGTCTTAC CCGGATTCGAACCGGGGTTGT TCGGATCAAA chrIV:644852-645434 + 69 1.14e-09 AAGGTCCTAC CCGGATTCGAACCGGGGTTGT CCGGATCAAA chrII:350563-351177 - 49 1.14e-09 AAGGTCTTAC CCGGATTCGAACCGGGGTTGT CCGGATCAAA chrXIII:586426-586897 + 34 2.67e-09 ATGATTTCGC CCAGGATCGAACTGGGGACGT TCTGCGTGTT chrXIII:420347-420926 + 11 2.67e-09 ATGATTTCGC CCAGGATCGAACTGGGGACGT TCTGCGTGTT chrXIII:372145-372767 + 48 2.67e-09 ATGATTTCGC CCAGGATCGAACTGGGGACGT TCTGCGTGTT chrVIII:85056-85588 + 35 2.67e-09 TTGATTTCGC CCAGGATCGAACTGGGGACGT TCTGCGTGTT chrVII:412082-412592 + 16 2.67e-09 TTGATTTCGC CCAGGATCGAACTGGGGACGT TCTGCGTGTT chrV:469248-469694 - 80 2.67e-09 . CCAGGATCGAACTGGGGACGT TCTGCGTGTT chrIV:488486-489167 + 30 2.67e-09 CTGATCCAAC CGAGGTTCGAACTCGGGATCT TCGCCGTGTA chrVII:700232-701310 - 6 3.05e-09 TTGATACCCG CGGGGTTTGAACCCGCGCCTC CGAAG chrXV:438393-438979 - 73 3.97e-09 CCTCATA GGGGGCTCGAACCCCTGACAT TTCGGTATCC chrXII:875238-875657 - 45 3.97e-09 ACTCCTCATA GGGGGCTCGAACCCCTGACAT TTCGGTATCC chrVII:115249-115865 - 47 3.97e-09 ACTCCTCATA GGGGGCTCGAACCCCTGACAT TTCGGTATCC chrXI:46380-47151 + 29 5.12e-09 ATGCCCTCTG TGGGAATTGAACCCACGATCC CCGCATTACG chrXIV:567855-568477 - 72 5.80e-09 GGGCGAGC TGGGAATTGAACCCAGGGCCT CTCGCATGCT chrXIV:546935-547390 - 55 5.80e-09 CGGGGCGAGC TGGGAATTGAACCCAGGGCCT CTCGCATGCT chrXII:92279-92987 - 38 5.80e-09 AGGGGCGAGC TGGGAATTGAACCCAGGGCCT CTCGCATGCT chrI:138916-139542 - 46 5.80e-09 CGGGGCGAGC TGGGAATTGAACCCAGGGCCT CTCGCATGCT chrXIII:807958-808565 + 44 1.05e-08 AAGGTCCCAC CCGGATTCGAACTGGGGTTGT TCGGATCAGA chrXIII:747573-748212 + 59 1.47e-08 ACACTCACGA TGGGGGTCGAACCCATAATCT TCTGATTAGA chrX:374211-374768 + 76 1.47e-08 GCACTCACGA TGGGGGTCGAACCCATAATCT TCTG chrX:355097-355746 - 45 1.47e-08 GCACTCACGA TGGGGGTCGAACCCATAATCT TCTGATTAGA chrVII:828209-829200 + 78 1.47e-08 GCACTCACGA TGGGGGTCGAACCCATAATCT TC chrVII:736173-736664 - 14 1.47e-08 ACACTCACGA TGGGGGTCGAACCCATAATCT TCTGATTAGA chrXVI:55792-56524 + 70 3.07e-08 TTGAAACGGA CAGGAATTGAACCTGCAACCC TTCGATTGCA chrVII:878345-879086 + 54 3.07e-08 ATGAAACGGA CAGGAATTGAACCTGCAACCC TTCGATTGCA chrVII:286922-287855 + 21 3.07e-08 ATGAAACGGA CAGGAATTGAACCTGCAACCC TTCGATTGCA chrXV:353813-354331 + 28 3.39e-08 ATGCTTCCAA TCGGATTTGAACCGATGATCT CCACATTACT chrXIV:104586-105207 - 2 3.39e-08 ATGCTTCCAA TCGGATTTGAACCGATGATCT C chrVIII:115875-116431 + 13 3.39e-08 ATGCTTCCAA TCGGATTTGAACCGATGATCT CCACATTACT chrIX:325505-326141 - 18 3.39e-08 TTGCTTCCAA TCGGATTTGAACCGATGATCT CCACATTACT chrIV:433962-434627 + 29 3.39e-08 ATGCTTCCAA TCGGATTTGAACCGATGATCT CCACATTACT chrII:266063-266750 - 65 3.39e-08 ATGCTTCCAA TCGGATTTGAACCGATGATCT CCACATTACT chrXIII:837668-838264 - 71 3.73e-08 TCTCCCGGG GGCGAGTCGAACGCCCGATCT CAAGATTTCG chrXIII:168566-169098 - 72 3.73e-08 CTCCCGGG GGCGAGTCGAACGCCCGATCT CAAGATTTCG chrX:542739-543274 + 9 3.73e-08 CTCCCGGG GGCGAGTCGAACGCCCGATCT CAAGATTTCG chrX:354009-354575 - 61 3.73e-08 ATCTCCCGGG GGCGAGTCGAACGCCCGATCT CAAGATTTCG chrVIII:466738-467339 - 44 3.73e-08 ATGCCACCTG CCAGAATTGAACTAGCGACCT TTGCATTACA chrVI:210427-210920 + 5 3.73e-08 CGGG GGCGAGTCGAACGCCCGATCT CAAGATTTCG chrIV:946134-946636 - 36 3.73e-08 ATCTCCCGGG GGCGAGTCGAACGCCCGATCT CAAGATTTCG chrXIII:463292-463913 - 44 4.52e-08 TCTCCGCGAC GGGGAATTGAACCCCGATCTG GCACGCGACA chrVII:544271-544910 + 46 4.52e-08 TCTCCGCGAC GGGGAATTGAACCCCGATCTG GCACGCGACA chrVII:531437-531816 - 76 4.52e-08 CGAC GGGGAATTGAACCCCGATCTG GCACGCGACA chrIX:336114-336683 + 10 4.52e-08 CTCCGCGAC GGGGAATTGAACCCCGATCTG GCACGCGACA chrIV:568681-569389 - 21 4.52e-08 TCTCCGCGAC GGGGAATTGAACCCCGATCTG GCACGCGACA chrXII:167637-168242 + 64 5.44e-08 ACGACAACTG CAGGACTCGAACCTGCGCGGG CAAAGCCCAA chrX:523758-524341 + 22 5.44e-08 ACGACAACTG CAGGACTCGAACCTGCGCGGG CAAAGCCCAA chrVIII:132673-133385 + 56 5.44e-08 TCGACAACTG CAGGACTCGAACCTGCGCGGG CAAAGCCCAA chrVII:561398-561956 + 44 5.44e-08 ACGACAACTG CAGGACTCGAACCTGCGCGGG CAAAGCCCAA chrIV:980728-981268 + 35 5.44e-08 ACGACAACTG CAGGACTCGAACCTGCGCGGG CAAAGCCCAA chrIV:437477-438122 - 75 5.44e-08 AACTG CAGGACTCGAACCTGCGCGGG CAAAGCCCAA chrI:182349-182811 + 1 5.44e-08 . CAGGACTCGAACCTGCGCGGG CAAAGCCCAA chrIV:619648-620395 + 7 5.95e-08 CCCCGC CAGGACTTGAACCTGGAATCT TCTGGTTCGT chrXV:976183-976689 - 78 7.76e-08 GG GGAGGTTCGAACTCTCGACCT TCAGATTATG chrXIII:572666-573192 + 13 7.76e-08 GTGCTCCAGG GGAGGTTCGAACTCTCGACCT TCAGATTATG chrXIV:632372-632911 - 52 1.38e-07 ACGACCCCAG TGAGGGTTGAACTCACGATCT TGCGATTAAC chrXII:975700-976280 + 52 1.38e-07 ACGACCCCAG TGAGGGTTGAACTCACGATCT TGCGATTAAC chrXI:74406-74990 - 20 1.38e-07 GCGACCCCAG TGAGGGTTGAACTCACGATCT TGCGATTAAC chrVI:137268-137812 + 5 1.38e-07 CCAG TGAGGGTTGAACTCACGATCT TGCGATTAAC chrXVI:689334-689880 - 60 2.49e-07 ACGACACCAG CAGGATTTGAACCAGCGCGGG CAGAGCCCAA chrV:288174-288806 + 12 2.49e-07 ACGACACCAG CAGGATTTGAACCAGCGCGGG CAGAGCCCAA chrIV:519523-520092 - 40 2.49e-07 TTGAAGGATG CGAGGTTCGAACTCGCGCGGA CAACCGTCCA chrIII:227754-228219 - 77 2.49e-07 CAG CAGGATTTGAACCAGCGCGGG CAGAGCCCAA chrII:347360-347930 - 62 2.49e-07 CTGAAGGATG CGAGGTTCGAACTCGCGCGGA CAACCGTCCA chrII:9315-9979 - 40 2.49e-07 CTGAAGGATG CGAGGTTCGAACTCGCGCGGA CAACCGTCCA chrXIII:362854-363324 - 67 2.67e-07 ATGCCATCTC CTAGAATCGAACCAGGGTTTC ATCGGCCACA chrXI:313151-313688 + 41 2.67e-07 ATGCCATCTC CTAGAATCGAACCAGGGTTTC ATCGGCCACA chrVIII:62550-63042 - 51 2.67e-07 ATGCCATCTC CTAGAATCGAACCAGGGTTTC ATCGGCCACA chrVII:110384-110936 + 24 2.67e-07 TTGCCATCTC CTAGAATCGAACCAGGGTTTC ATCGGCCACA chrV:434390-434768 + 21 2.67e-07 ATGCCATCTC CTAGAATCGAACCAGGGTTTC ATCGGCCACA chrV:207126-207770 - 1 2.67e-07 ATGCCATCTC CTAGAATCGAACCAGGGTTTC chrXV:274487-275012 - 45 3.72e-07 GCGTCACAGA CAGGATTCGAACCTGCGCAGG TAAAACCCAA chrXII:784127-784729 - 46 3.72e-07 GCGTCACAGA CAGGATTCGAACCTGCGCAGG TAAAACCCAA chrXVI:435616-436240 + 24 4.21e-07 AAGCTCGCAC TCAGGATCGAACTAAGGACCA ACAGATTTGC chrVII:706941-707362 + 16 4.21e-07 AAGCTCGCAC TCAGGATCGAACTAAGGACCA ACAGATTTGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSGGRATCGAACCSSBGAYCT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:123335-123824 1.8e-13 56_[+1]_23 chrXVI:572029-572560 4.8e-11 65_[-1]_14 chrX:531508-532233 4.8e-11 48_[-1]_31 chrVI:180640-181287 4.8e-11 69_[+1]_10 chrIV:83342-83812 4.8e-11 61_[-1]_18 chrIII:142490-143020 4.8e-11 4_[+1]_75 chrXV:594033-594700 8.9e-11 46_[+1]_33 chrXV:854005-854436 1.1e-10 25_[+1]_54 chrXII:214663-215191 1.1e-10 14_[+1]_65 chrXVI:880117-880559 2.2e-10 16_[+1]_63 chrXVI:819297-819875 2.2e-10 36_[-1]_43 chrXIV:602155-602565 2.2e-10 45_[-1]_34 chrXIV:569613-570142 2.2e-10 48_[+1]_31 chrV:443000-443510 2.2e-10 5_[+1]_74 chrIX:183134-183734 2.2e-10 64_[+1]_15 chrIV:667762-668243 2.2e-10 63_[+1]_16 chrVIII:475531-475931 2.7e-10 33_[+1]_46 chrIV:1075313-1075739 2.7e-10 4_[+1]_75 chrXVI:581820-582364 3.8e-10 62_[-1]_17 chrXIII:480387-480889 3.8e-10 41_[+1]_38 chrXI:202823-203318 3.8e-10 21_[-1]_58 chrX:414737-415293 3.8e-10 43_[-1]_36 chrVII:185459-185979 3.8e-10 53_[+1]_26 chrVII:122093-122571 3.8e-10 29_[-1]_50 chrVI:226432-226971 3.8e-10 45_[+1]_34 chrV:135139-135743 3.8e-10 42_[+1]_37 chrIV:1201500-1202128 3.8e-10 28_[-1]_51 chrXVI:856742-857120 6.2e-10 63_[-1]_16 chrXII:656652-657213 6.2e-10 60_[+1]_19 chrIV:410122-410705 6.2e-10 58_[-1]_21 chrXVI:209851-210582 9.8e-10 34_[+1]_45 chrXIII:290498-291141 9.8e-10 73_[-1]_6 chrVII:541576-542175 9.8e-10 66_[-1]_13 chrIV:1016940-1017543 9.8e-10 24_[+1]_55 chrII:644974-645497 9.8e-10 23_[-1]_56 chrV:250113-250611 1.1e-09 15_[-1]_64 chrV:130834-131412 1.1e-09 17_[+1]_62 chrIV:644852-645434 1.1e-09 68_[+1]_11 chrII:350563-351177 1.1e-09 48_[-1]_31 chrXIII:586426-586897 2.7e-09 33_[+1]_46 chrXIII:420347-420926 2.7e-09 10_[+1]_69 chrXIII:372145-372767 2.7e-09 47_[+1]_32 chrVIII:85056-85588 2.7e-09 34_[+1]_45 chrVII:412082-412592 2.7e-09 15_[+1]_64 chrV:469248-469694 2.7e-09 79_[-1] chrIV:488486-489167 2.7e-09 29_[+1]_50 chrVII:700232-701310 3.1e-09 5_[-1]_74 chrXV:438393-438979 4e-09 72_[-1]_7 chrXII:875238-875657 4e-09 44_[-1]_35 chrVII:115249-115865 4e-09 46_[-1]_33 chrXI:46380-47151 5.1e-09 28_[+1]_51 chrXIV:567855-568477 5.8e-09 71_[-1]_8 chrXIV:546935-547390 5.8e-09 54_[-1]_25 chrXII:92279-92987 5.8e-09 37_[-1]_42 chrI:138916-139542 5.8e-09 45_[-1]_34 chrXIII:807958-808565 1.1e-08 43_[+1]_36 chrXIII:747573-748212 1.5e-08 58_[+1]_21 chrX:374211-374768 1.5e-08 75_[+1]_4 chrX:355097-355746 1.5e-08 44_[-1]_35 chrVII:828209-829200 1.5e-08 77_[+1]_2 chrVII:736173-736664 1.5e-08 13_[-1]_66 chrXVI:55792-56524 3.1e-08 69_[+1]_10 chrVII:878345-879086 3.1e-08 53_[+1]_26 chrVII:286922-287855 3.1e-08 20_[+1]_59 chrXV:353813-354331 3.4e-08 27_[+1]_52 chrXIV:104586-105207 3.4e-08 1_[-1]_78 chrVIII:115875-116431 3.4e-08 12_[+1]_67 chrIX:325505-326141 3.4e-08 17_[-1]_62 chrIV:433962-434627 3.4e-08 28_[+1]_51 chrII:266063-266750 3.4e-08 64_[-1]_15 chrXIII:837668-838264 3.7e-08 70_[-1]_9 chrXIII:168566-169098 3.7e-08 71_[-1]_8 chrX:542739-543274 3.7e-08 8_[+1]_71 chrX:354009-354575 3.7e-08 60_[-1]_19 chrVIII:466738-467339 3.7e-08 43_[-1]_36 chrVI:210427-210920 3.7e-08 4_[+1]_75 chrIV:946134-946636 3.7e-08 35_[-1]_44 chrXIII:463292-463913 4.5e-08 43_[-1]_36 chrVII:544271-544910 4.5e-08 45_[+1]_34 chrVII:531437-531816 4.5e-08 75_[-1]_4 chrIX:336114-336683 4.5e-08 9_[+1]_70 chrIV:568681-569389 4.5e-08 20_[-1]_59 chrXII:167637-168242 5.4e-08 63_[+1]_16 chrX:523758-524341 5.4e-08 21_[+1]_58 chrVIII:132673-133385 5.4e-08 55_[+1]_24 chrVII:561398-561956 5.4e-08 43_[+1]_36 chrIV:980728-981268 5.4e-08 34_[+1]_45 chrIV:437477-438122 5.4e-08 74_[-1]_5 chrI:182349-182811 5.4e-08 [+1]_79 chrIV:619648-620395 6e-08 6_[+1]_73 chrXV:976183-976689 7.8e-08 77_[-1]_2 chrXIII:572666-573192 7.8e-08 12_[+1]_67 chrXIV:632372-632911 1.4e-07 51_[-1]_28 chrXII:975700-976280 1.4e-07 51_[+1]_28 chrXI:74406-74990 1.4e-07 19_[-1]_60 chrVI:137268-137812 1.4e-07 4_[+1]_75 chrXVI:689334-689880 2.5e-07 59_[-1]_20 chrV:288174-288806 2.5e-07 11_[+1]_68 chrIV:519523-520092 2.5e-07 39_[-1]_40 chrIII:227754-228219 2.5e-07 76_[-1]_3 chrII:347360-347930 2.5e-07 61_[-1]_18 chrII:9315-9979 2.5e-07 39_[-1]_40 chrXIII:362854-363324 2.7e-07 66_[-1]_13 chrXI:313151-313688 2.7e-07 40_[+1]_39 chrVIII:62550-63042 2.7e-07 50_[-1]_29 chrVII:110384-110936 2.7e-07 23_[+1]_56 chrV:434390-434768 2.7e-07 20_[+1]_59 chrV:207126-207770 2.7e-07 [-1]_79 chrXV:274487-275012 3.7e-07 44_[-1]_35 chrXII:784127-784729 3.7e-07 45_[-1]_34 chrXVI:435616-436240 4.2e-07 23_[+1]_56 chrVII:706941-707362 4.2e-07 15_[+1]_64 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSGGRATCGAACCSSBGAYCT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SSGGRATCGAACCSSBGAYCT width=21 seqs=112 chrIII:123335-123824 ( 57) CGGGACTCGAACCCGGGACCT 1 chrXVI:572029-572560 ( 66) CCGGAATCGAACCGGGGGCCC 1 chrX:531508-532233 ( 49) CCGGAATCGAACCGGGGGCCC 1 chrVI:180640-181287 ( 70) CCGGAATCGAACCGGGGGCCC 1 chrIV:83342-83812 ( 62) CCGGAATCGAACCGGGGGCCC 1 chrIII:142490-143020 ( 5) CCGGAATCGAACCGGGGGCCC 1 chrXV:594033-594700 ( 47) CGGGAATCGAACCCGGGCCTC 1 chrXV:854005-854436 ( 26) CCGGAATCGAACCGATGACCT 1 chrXII:214663-215191 ( 15) CCGGAATCGAACCGATGACCT 1 chrXVI:880117-880559 ( 17) GCGGGATCGAACCGCTGATCC 1 chrXVI:819297-819875 ( 37) GCGGGATCGAACCGCTGATCC 1 chrXIV:602155-602565 ( 46) GCGGGATCGAACCGCTGATCC 1 chrXIV:569613-570142 ( 49) GCGGGATCGAACCGCTGATCC 1 chrV:443000-443510 ( 6) GCGGGATCGAACCGCTGATCC 1 chrIX:183134-183734 ( 65) GCGGGATCGAACCGCTGATCC 1 chrIV:667762-668243 ( 64) GCGGGATCGAACCGCTGATCC 1 chrVIII:475531-475931 ( 34) CGAGGATCGAACTCGGGACCT 1 chrIV:1075313-1075739 ( 5) CGAGGATCGAACTCGGGACCT 1 chrXVI:581820-582364 ( 63) GGGGGCTCGAACCCCTAACCT 1 chrXIII:480387-480889 ( 42) GGGGGCTCGAACCCCTAACCT 1 chrXI:202823-203318 ( 22) GGGGGCTCGAACCCCTAACCT 1 chrX:414737-415293 ( 44) GGGGGCTCGAACCCCTAACCT 1 chrVII:185459-185979 ( 54) GGGGGCTCGAACCCCTAACCT 1 chrVII:122093-122571 ( 30) GGGGGCTCGAACCCCTAACCT 1 chrVI:226432-226971 ( 46) GGGGGCTCGAACCCCTAACCT 1 chrV:135139-135743 ( 43) GGGGGCTCGAACCCCTAACCT 1 chrIV:1201500-1202128 ( 29) GGGGGCTCGAACCCCTAACCT 1 chrXVI:856742-857120 ( 64) CCGGAATCGAACCGGAGACCT 1 chrXII:656652-657213 ( 61) CCGGAATCGAACCGGAGACCT 1 chrIV:410122-410705 ( 59) CCGGAATCGAACCGGAGACCT 1 chrXVI:209851-210582 ( 35) GGGGAGTCGAACCCCGGTCTC 1 chrXIII:290498-291141 ( 74) GGGGAGTCGAACCCCGGTCTC 1 chrVII:541576-542175 ( 67) GGGGAGTCGAACCCCGGTCTC 1 chrIV:1016940-1017543 ( 25) GGGGAGTCGAACCCCGGTCTC 1 chrII:644974-645497 ( 24) GGGGAGTCGAACCCCGGTCTC 1 chrV:250113-250611 ( 16) CCGGATTCGAACCGGGGTTGT 1 chrV:130834-131412 ( 18) CCGGATTCGAACCGGGGTTGT 1 chrIV:644852-645434 ( 69) CCGGATTCGAACCGGGGTTGT 1 chrII:350563-351177 ( 49) CCGGATTCGAACCGGGGTTGT 1 chrXIII:586426-586897 ( 34) CCAGGATCGAACTGGGGACGT 1 chrXIII:420347-420926 ( 11) CCAGGATCGAACTGGGGACGT 1 chrXIII:372145-372767 ( 48) CCAGGATCGAACTGGGGACGT 1 chrVIII:85056-85588 ( 35) CCAGGATCGAACTGGGGACGT 1 chrVII:412082-412592 ( 16) CCAGGATCGAACTGGGGACGT 1 chrV:469248-469694 ( 80) CCAGGATCGAACTGGGGACGT 1 chrIV:488486-489167 ( 30) CGAGGTTCGAACTCGGGATCT 1 chrVII:700232-701310 ( 6) CGGGGTTTGAACCCGCGCCTC 1 chrXV:438393-438979 ( 73) GGGGGCTCGAACCCCTGACAT 1 chrXII:875238-875657 ( 45) GGGGGCTCGAACCCCTGACAT 1 chrVII:115249-115865 ( 47) GGGGGCTCGAACCCCTGACAT 1 chrXI:46380-47151 ( 29) TGGGAATTGAACCCACGATCC 1 chrXIV:567855-568477 ( 72) TGGGAATTGAACCCAGGGCCT 1 chrXIV:546935-547390 ( 55) TGGGAATTGAACCCAGGGCCT 1 chrXII:92279-92987 ( 38) TGGGAATTGAACCCAGGGCCT 1 chrI:138916-139542 ( 46) TGGGAATTGAACCCAGGGCCT 1 chrXIII:807958-808565 ( 44) CCGGATTCGAACTGGGGTTGT 1 chrXIII:747573-748212 ( 59) TGGGGGTCGAACCCATAATCT 1 chrX:374211-374768 ( 76) TGGGGGTCGAACCCATAATCT 1 chrX:355097-355746 ( 45) TGGGGGTCGAACCCATAATCT 1 chrVII:828209-829200 ( 78) TGGGGGTCGAACCCATAATCT 1 chrVII:736173-736664 ( 14) TGGGGGTCGAACCCATAATCT 1 chrXVI:55792-56524 ( 70) CAGGAATTGAACCTGCAACCC 1 chrVII:878345-879086 ( 54) CAGGAATTGAACCTGCAACCC 1 chrVII:286922-287855 ( 21) CAGGAATTGAACCTGCAACCC 1 chrXV:353813-354331 ( 28) TCGGATTTGAACCGATGATCT 1 chrXIV:104586-105207 ( 2) TCGGATTTGAACCGATGATCT 1 chrVIII:115875-116431 ( 13) TCGGATTTGAACCGATGATCT 1 chrIX:325505-326141 ( 18) TCGGATTTGAACCGATGATCT 1 chrIV:433962-434627 ( 29) TCGGATTTGAACCGATGATCT 1 chrII:266063-266750 ( 65) TCGGATTTGAACCGATGATCT 1 chrXIII:837668-838264 ( 71) GGCGAGTCGAACGCCCGATCT 1 chrXIII:168566-169098 ( 72) GGCGAGTCGAACGCCCGATCT 1 chrX:542739-543274 ( 9) GGCGAGTCGAACGCCCGATCT 1 chrX:354009-354575 ( 61) GGCGAGTCGAACGCCCGATCT 1 chrVIII:466738-467339 ( 44) CCAGAATTGAACTAGCGACCT 1 chrVI:210427-210920 ( 5) GGCGAGTCGAACGCCCGATCT 1 chrIV:946134-946636 ( 36) GGCGAGTCGAACGCCCGATCT 1 chrXIII:463292-463913 ( 44) GGGGAATTGAACCCCGATCTG 1 chrVII:544271-544910 ( 46) GGGGAATTGAACCCCGATCTG 1 chrVII:531437-531816 ( 76) GGGGAATTGAACCCCGATCTG 1 chrIX:336114-336683 ( 10) GGGGAATTGAACCCCGATCTG 1 chrIV:568681-569389 ( 21) GGGGAATTGAACCCCGATCTG 1 chrXII:167637-168242 ( 64) CAGGACTCGAACCTGCGCGGG 1 chrX:523758-524341 ( 22) CAGGACTCGAACCTGCGCGGG 1 chrVIII:132673-133385 ( 56) CAGGACTCGAACCTGCGCGGG 1 chrVII:561398-561956 ( 44) CAGGACTCGAACCTGCGCGGG 1 chrIV:980728-981268 ( 35) CAGGACTCGAACCTGCGCGGG 1 chrIV:437477-438122 ( 75) CAGGACTCGAACCTGCGCGGG 1 chrI:182349-182811 ( 1) CAGGACTCGAACCTGCGCGGG 1 chrIV:619648-620395 ( 7) CAGGACTTGAACCTGGAATCT 1 chrXV:976183-976689 ( 78) GGAGGTTCGAACTCTCGACCT 1 chrXIII:572666-573192 ( 13) GGAGGTTCGAACTCTCGACCT 1 chrXIV:632372-632911 ( 52) TGAGGGTTGAACTCACGATCT 1 chrXII:975700-976280 ( 52) TGAGGGTTGAACTCACGATCT 1 chrXI:74406-74990 ( 20) TGAGGGTTGAACTCACGATCT 1 chrVI:137268-137812 ( 5) TGAGGGTTGAACTCACGATCT 1 chrXVI:689334-689880 ( 60) CAGGATTTGAACCAGCGCGGG 1 chrV:288174-288806 ( 12) CAGGATTTGAACCAGCGCGGG 1 chrIV:519523-520092 ( 40) CGAGGTTCGAACTCGCGCGGA 1 chrIII:227754-228219 ( 77) CAGGATTTGAACCAGCGCGGG 1 chrII:347360-347930 ( 62) CGAGGTTCGAACTCGCGCGGA 1 chrII:9315-9979 ( 40) CGAGGTTCGAACTCGCGCGGA 1 chrXIII:362854-363324 ( 67) CTAGAATCGAACCAGGGTTTC 1 chrXI:313151-313688 ( 41) CTAGAATCGAACCAGGGTTTC 1 chrVIII:62550-63042 ( 51) CTAGAATCGAACCAGGGTTTC 1 chrVII:110384-110936 ( 24) CTAGAATCGAACCAGGGTTTC 1 chrV:434390-434768 ( 21) CTAGAATCGAACCAGGGTTTC 1 chrV:207126-207770 ( 1) CTAGAATCGAACCAGGGTTTC 1 chrXV:274487-275012 ( 45) CAGGATTCGAACCTGCGCAGG 1 chrXII:784127-784729 ( 46) CAGGATTCGAACCTGCGCAGG 1 chrXVI:435616-436240 ( 24) TCAGGATCGAACTAAGGACCA 1 chrVII:706941-707362 ( 16) TCAGGATCGAACTAAGGACCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSGGRATCGAACCSSBGAYCT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 44640 bayes= 7.61087 E= 5.1e-370 -1345 135 83 -68 -114 83 135 -255 -38 -180 192 -1345 -1345 -1345 243 -1345 93 -1345 111 -1345 45 1 -6 -61 -1345 -1345 -1345 167 -1345 199 -1345 -28 -1345 -1345 243 -1345 167 -1345 -1345 -1345 167 -1345 -1345 -1345 -1345 243 -1345 -1345 -1345 201 -180 -68 -155 135 71 -144 -55 75 129 -413 -355 66 108 -14 -61 -1345 209 -1345 89 -29 -121 -74 -413 140 -68 26 -355 164 32 -97 -281 48 -29 79 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSGGRATCGAACCSSBGAYCT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 112 E= 5.1e-370 0.000000 0.473214 0.330357 0.196429 0.142857 0.330357 0.473214 0.053571 0.241071 0.053571 0.705357 0.000000 0.000000 0.000000 1.000000 0.000000 0.598214 0.000000 0.401786 0.000000 0.428571 0.187500 0.178571 0.205357 0.000000 0.000000 0.000000 1.000000 0.000000 0.741071 0.000000 0.258929 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.750000 0.053571 0.196429 0.107143 0.473214 0.303571 0.116071 0.214286 0.312500 0.455357 0.017857 0.026786 0.294643 0.392857 0.285714 0.205357 0.000000 0.794643 0.000000 0.580357 0.151786 0.080357 0.187500 0.017857 0.491071 0.116071 0.375000 0.026786 0.580357 0.232143 0.160714 0.044643 0.258929 0.151786 0.544643 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSGGRATCGAACCSSBGAYCT MEME-1 regular expression -------------------------------------------------------------------------------- [CG][GC][GA]G[AG][AT]T[CT]GAACC[CG][GCA][GCT][GA]A[CT][CG][TC] -------------------------------------------------------------------------------- Time 306.33 secs. ******************************************************************************** ******************************************************************************** MOTIF WGSBYNYDTGGYBYAGTGG MEME-2 width = 19 sites = 114 llr = 1533 E-value = 7.9e-237 ******************************************************************************** -------------------------------------------------------------------------------- Motif WGSBYNYDTGGYBYAGTGG MEME-2 Description -------------------------------------------------------------------------------- Simplified A 4:111223:3::11a1::: pos.-specific C 2:43433::::643::11: probability G 1a531314:7a:32:9:6a matrix T 4::43243a::424::92: bits 2.4 * 2.2 * * * 1.9 * * * * 1.7 * * * ** * Relative 1.5 * *** *** * Entropy 1.2 * **** *** * (19.4 bits) 1.0 * **** *** * 0.7 ** **** ***** 0.5 ** ****** ***** 0.2 ****************** 0.0 ------------------- Multilevel TGGTCCTGTGGCCTAGTGG consensus A CGTGCT A TGC T sequence C A A T T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSBYNYDTGGYBYAGTGG MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------- chrVIII:388676-389232 - 74 4.07e-10 CAGATACA TGGGCGTGTGGTCTAGTGG TATGATTCTC chrXV:464218-464678 + 51 5.38e-10 CAAGTTAACA AGGGCGTGTGGTCTAGTGG TATGATTCTC chrXIII:195888-196418 - 50 5.38e-10 CAAGTTCACA AGGGCGTGTGGTCTAGTGG TATGATTCTC chrVI:101113-101689 + 24 9.11e-10 AACAATAATT CGGGCGTGTGGTCTAGTGG TATGATTCTC chrXVI:435616-436240 - 69 1.91e-09 ATACAACAAA AGCTCGTATGGCGCAGTGG TAGCGCAGCA chrVII:706941-707362 - 61 1.91e-09 CAGAAAATCA AGCTCGTATGGCGCAGTGG TAGCGCAGCA chrXIII:768202-768658 - 44 4.60e-09 CAATAAGAAA TGGGCGTGTGGCGTAGTCG GTAGCGCGCT chrIV:410122-410705 + 15 4.60e-09 ATACAAATAT TGGGCGTGTGGCGTAGTCG GTAGCGCGCT chrX:197173-197637 - 13 5.62e-09 CAATAATATT AGGGCGTGTGGCGTAGTCG GTAGCGCGCT chrXVI:856742-857120 + 20 8.26e-09 CAACAAGATT CGGGCGTGTGGCGTAGTCG GTAGCGCGCT chrVI:204813-205230 - 8 8.26e-09 AACAAACGTT CGGGCGTGTGGCGTAGTCG GTAGCGC chrXVI:880117-880559 - 64 9.96e-09 AACAATATAA TGGTCTCTTGGCCCAGTTG GTTAAGGCAC chrXII:1051908-1052396 - 25 9.96e-09 GTCCTTTTCA TGGTCTCTTGGCCCAGTTG GTTAAGGCAC chrXII:734517-735021 + 82 9.96e-09 CAACAAAGTT TGGTCTCTTGGCCCAGTTG chrV:443000-443510 - 53 9.96e-09 CATTAAAATT TGGTCTCTTGGCCCAGTTG GTTAAGGCAC chrV:551041-551713 - 14 1.20e-08 CACAGATTAC AGGTCTCTTGGCCCAGTTG GTTAAGGCAC chrXII:731858-732285 + 68 1.43e-08 CAACATACAA TGGGAGTTTGGCCGAGTGG TTTAAGGCGT chrX:617708-618172 + 28 1.43e-08 CAACAAACAA TGGGAGTTTGGCCGAGTGG TTTAAGGCGT chrIV:488486-489167 - 77 1.43e-08 GTTTC CGGTCCAATGGTCCAGTGG TTCAAGACGT chrIII:227754-228219 + 5 1.43e-08 GAAA TGGCACTATGGCCGAGTGG TTAAGGCGAG chrV:288174-288806 - 67 1.70e-08 TCATAATGAT AGGCACTATGGCCGAGTGG TTAAGGCGAC chrXV:854005-854436 - 72 2.01e-08 AACAGTCATC AGGGCACATGGCGCAGTTG GTAGCGCGCT chrXII:605144-605665 - 61 2.01e-08 CTTTCGAAAA TGCTCGTGTAGCTCAGTGG TTAGAGCTTC chrXII:214663-215191 - 61 2.01e-08 TACGCGTTTT AGGGCACATGGCGCAGTTG GTAGCGCGCT chrIV:884141-884642 + 19 2.01e-08 CTTTCGAAAA TGCTCGTGTAGCTCAGTGG TTAGAGCTTC chrXI:46380-47151 - 74 2.36e-08 AATTACTC AGCCCTTTTGGCCAAGTGG TAAGGCATCG chrXIII:258916-259523 - 53 2.77e-08 CAAGTTAGTA TGGCAACTTGGCCGAGTGG TTAAGGCGAA chrI:182349-182811 - 56 2.77e-08 CATACAATTT TGGCAACTTGGCCGAGTGG TTAAGGCGAA chrX:523758-524341 - 77 3.23e-08 ATTAA AGGCAACTTGGCCGAGTGG TTAAGGCGAA chrIV:437477-438122 + 22 3.23e-08 ATCATTAGTA AGGCAACTTGGCCGAGTGG TTAAGGCGAA chrXI:162299-162822 - 31 4.34e-08 AACAAATATT AGCTCGCGTGGCGTAATGG CAACGCGTCT chrII:405562-406212 + 40 4.34e-08 AACAAATAGT AGCTCGCGTGGCGTAATGG CAACGCGTCT chrVII:1003982-1004421 + 64 5.78e-08 TTCAAGGGTT TGCCTCCTTAGCTTAGTGG TAGAGCGTTG chrVII:661513-661952 + 66 5.78e-08 GGTAAAAATT TGCCTCCTTAGCTTAGTGG TAGAGCGTTG chrIII:168118-168631 - 31 5.78e-08 CAAGAAGTCC TGGTCCTATAGTGTAGTGG TTATCACTTT chrXVI:860097-860655 + 52 6.63e-08 GTAAATAACA AGCGCAAGTGGTTTAGTGG TAAAATCCAA chrXI:307888-308557 - 28 6.63e-08 AACAATTAAG TGGTTTCGTGGTCTAGTCG GTTATGGCAT chrX:531508-532233 + 7 6.63e-08 TTAGTG AGCGCAAGTGGTTTAGTGG TAAAATCCAA chrX:396505-397065 - 44 6.63e-08 ATCAAAAGTA AGCGCAAGTGGTTTAGTGG TAAAATCCAA chrVII:930836-931232 - 22 6.63e-08 ATAATCAGTA AGCGCAAGTGGTTTAGTGG TAAAATCCAA chrVII:823245-823705 + 56 6.63e-08 CCAATAAGAG TGGTTTCGTGGTCTAGTCG GTTATGGCAT chrVII:412082-412592 - 63 6.63e-08 ATCAAAAAAC TGGTTTCGTGGTCTAGTCG GTTATGGCAT chrVI:161976-162485 + 47 6.63e-08 CAAGAAAACA AGCGCAAGTGGTTTAGTGG TAAAATCCAA chrV:469248-469694 + 35 6.63e-08 AAGAAATAAT TGGTTTCGTGGTCTAGTCG GTTATGGCAT chrIV:83342-83812 + 20 6.63e-08 AAGTTCACTT AGCGCAAGTGGTTTAGTGG TAAAATCCAA chrIII:142490-143020 - 49 6.63e-08 CAAGATTACT AGCGCAAGTGGTTTAGTGG TAAAATCCAA chrXIII:420347-420926 - 58 7.59e-08 CACAAATAAC AGGTTTCGTGGTCTAGTCG GTTATGGCAT chrV:438355-438994 + 75 7.59e-08 TCAACAAATT AGGTTTCGTGGTCTAGTCG GTTATGG chrII:326575-327150 - 36 7.59e-08 ATCGAGTTCC GGGTCCAATGGTCCAGTGG TTCAAGACGT chrXVI:572029-572560 + 24 8.66e-08 CACAATACTT CGCGCAAGTGGTTTAGTGG TAAAATCCAA chrXIV:96017-96663 - 5 8.66e-08 ATCCAACACA TGGGCGGTTAGTGTAGTGG TTAT chrXIII:183737-184198 - 34 8.66e-08 CAATAAAGAT CGCGCAAGTGGTTTAGTGG TAAAATCCAA chrXII:448475-449018 - 8 8.66e-08 CAAGAAGTTC CGGTCCTATAGTGTAGTGG TTATCAC chrVIII:134029-134616 + 48 8.66e-08 CAGTAAGTTC CGGTCCTATAGTGTAGTGG TTATCACTTT chrVI:191331-191830 - 66 8.66e-08 CAAGAGATTC TGTCCCAGTGGCCGAGTGG TTAAGGCGAT chrIV:802546-803048 - 38 8.66e-08 CATGAATTGT CGGTCCTATAGTGTAGTGG TTATCACTTT chrXVI:689334-689880 + 7 1.12e-07 TATTTT GGGCACTATGGCCGAGTGG TTAAGGCGAC chrXV:353813-354331 - 74 1.12e-07 CGGTTTAC TGCTTCTATGGCCAAGTTG GTAAGGCGCC chrII:266063-266750 + 21 1.12e-07 CATCAAAAAC TGCTTCTATGGCCAAGTTG GTAAGGCGCC chrXV:113391-114148 + 82 1.26e-07 TCAGAGATTT AGCTTCTATGGCCAAGTTG chrXV:110845-111268 - 10 1.26e-07 ACAATTAACC CGGGCGGTTAGTGTAGTGG TTATCATCC chrXI:458092-459052 + 34 1.26e-07 AACAAATAAG TGGTTGTTTGGCCGAGCGG TCTAAGGCGC chrVIII:115875-116431 - 59 1.26e-07 TCACTATTAG AGCTTCTATGGCCAAGTTG GTAAGGCGCC chrVII:857241-857649 - 79 1.26e-07 AAG TGGTTGTTTGGCCGAGCGG TCTAAGGCGC chrIV:1461414-1462225 - 43 1.26e-07 AACAAATAAG TGGTTGTTTGGCCGAGCGG TCTAAGGCGC chrIV:433962-434627 - 75 1.26e-07 AATCAGA AGCTTCTATGGCCAAGTTG GTAAGGCGCC chrXI:83944-84411 + 80 1.80e-07 AAAATTTGTA TGGAGGGTTGGCCGAGTGG TC chrX:424274-424790 - 16 1.80e-07 TTAAATAAGA TGGAGGGTTGGCCGAGTGG TCTAAGGCGG chrV:99879-100342 + 72 2.26e-07 CAAGTTGGCT AAGCGCCGTGGCGCAGTGG AAGCGCGCAG chrXII:962787-963322 - 34 2.52e-07 GTATTATCGA CGGAGGGTTGGCCGAGTGG TCTAAGGCGG chrII:347360-347930 + 7 2.52e-07 TTTATA CGGAGGGTTGGCCGAGTGG TCTAAGGCGG chrXVI:338562-339202 - 70 2.80e-07 CATGATTTAG CAGCGCCGTGGCGCAGTGG AAGCGCGCAG chrXV:709977-710518 + 3 2.80e-07 AG CAGCGCCGTGGCGCAGTGG AAGCGCGCAG chrIV:1256867-1257307 - 25 3.83e-07 AGATCTTCTT AGCGAAAGTGGTTCAGTGG TTAGAATTCA chrV:130834-131412 - 63 4.23e-07 AATAATTAAG AGGTTTTATAGTGTAGTGG TTATCACTTT chrXIV:560569-561023 - 2 5.15e-07 CGTAATAACG GGCTTCTATGGCCAAGTTG G chrXIV:632372-632911 + 7 5.67e-07 TTAAAG TGACTCCATGGCCAAGTTG GTTAAGGCGT chrVI:137268-137812 - 52 5.67e-07 CAAAAGTGAC TGACTCCATGGCCAAGTTG GTTAAGGCGT chrIII:127513-127877 + 70 5.67e-07 CAAGATAAAA TGACTCCATGGCCAAGTTG GTTAAGGCGT chrXV:487190-487707 + 40 6.23e-07 CAACAAAGTT AGACTCCATGGCCAAGTTG GTTAAGGCGT chrXIV:631689-632168 - 22 6.23e-07 CAACTTCTAC CGGGCGTGTGGTCTAGAGG TATGATTCTC chrVII:730828-731434 + 55 6.23e-07 ATAGTCAAAA AGACTCCATGGCCAAGTTG GTTAAGGCGT chrXII:489285-489563 + 44 6.84e-07 GGTAAGAGCC TGACCGAGTAGTGTAGTGG GTGACCATAC chrXVI:810422-810919 + 55 7.50e-07 TCATTATTTG CGACTCCATGGCCAAGTTG GTTAAGGCGT chrXIV:374701-375086 + 25 7.50e-07 CAGAAAAATA AGCGGACTTAGCTCAGTTG GGAGAGCGCC chrIV:1095125-1095760 - 52 7.50e-07 GTCTTATGTT AGCGGACTTAGCTCAGTTG GGAGAGCGCC chrXVI:560017-560520 - 54 1.07e-06 ATAGAAATTG AGCGGATTTAGCTCAGTTG GGAGAGCGCC chrXIII:352088-352497 + 37 1.07e-06 TATGAATATA AGCGGATTTAGCTCAGTTG GGAGAGCGCC chrVIII:237717-238173 - 27 1.07e-06 ACAAATAGTA AGCGGATTTAGCTCAGTTG GGAGAGCGCC chrII:36166-36638 + 45 1.07e-06 ATTAGTTGTA AGCGGATTTAGCTCAGTTG GGAGAGCGCC chrII:350563-351177 + 6 1.38e-06 TAAAA GGGTTTTATAGTGTAGTGG TTATCACTTT chrX:690507-690848 - 42 1.63e-06 GGAAGAAGTG TGCCCTGGTGGTAAAGTTG GGTTGAATGG chrXI:282824-284844 - 73 1.76e-06 TCAGCCTTT TGCTTCTTTGGTGGAGTGT AGGTTAGAGC chrX:422570-423268 + 67 2.07e-06 ATCCTTTGTA TGCTTCAGTAGCTCAGTAG GAAGAGCGTC chrXIII:572666-573192 - 59 2.23e-06 CATAACAGAC AGCTTCAGTAGCTCAGTAG GAAGAGCGTC chrXIII:362854-363324 + 24 2.41e-06 AATCCAAGTT TGCCATCTTAGTATAGTGG TTAGTACACA chrVIII:62550-63042 + 8 2.41e-06 AATCATA TGCCATCTTAGTATAGTGG TTAGTACACA chrVII:110384-110936 - 69 2.41e-06 AATAATTACC TGCCATCTTAGTATAGTGG TTAGTACACA chrXVI:581820-582364 + 19 2.60e-06 TCAACAAAAG AGCCTTGTTGGCGCAATCG GTAGCGCGTA chrXV:976183-976689 + 34 2.60e-06 ATATTTTGTG CGCTTCAGTAGCTCAGTAG GAAGAGCGTC chrVII:876137-876660 + 45 2.60e-06 ATAATAGAAT AGCCTTGTTGGCGCAATCG GTAGCGCGTA chrIV:1352318-1352749 - 38 2.60e-06 CCAACGAAAT AGCCTTGTTGGCGCAATCG GTAGCGCGTA chrV:434390-434768 - 66 3.02e-06 ATTGAAAAGT CGCCATCTTAGTATAGTGG TTAGTACACA chrX:538342-538761 + 53 6.07e-06 CAACCAAGTT GGTTCCGTTGGCGTAATGG TAACGCGTCT chrIV:1450272-1450421 + 10 6.07e-06 TCTTCTCTT TGCCTTGGCAGCCCAGTTG TGAGATCTAG chrXIV:6494-7166 - 3 8.36e-06 TGGTGGTTGG GAGTGGTATGGTTGAGTGG GG chrXI:302657-303254 + 12 8.89e-06 TATTCCAAGA TGAAGCGGTGGCTCAATGG TAGAGCTTTC chrX:415691-416313 - 67 8.89e-06 CAACAAAAGT TGAAGCGGTGGCTCAATGG TAGAGCTTTC chrVIII:475531-475931 - 80 9.45e-06 TC TGTTCCAATAGTGTAGCGG CTATCACGTT chrIV:1075313-1075739 - 51 9.45e-06 TCCGTAATAT TGTTCCAATAGTGTAGCGG CTATCACGTT chrXVI:627348-627688 + 77 1.00e-05 GTCGTTTGGA TGCGTGGGTGGTATAGTTT CTTTT chrXV:281675-282514 + 79 1.43e-05 TTTTATATAT CGCTTAAATAGAGGAGTGG ATG chrXV:438393-438979 + 15 3.13e-05 CATCCTTGTT AGCTCAGTTGGTAGAGCGT TCGGCTTTTA chrVIII:488258-488613 - 23 4.35e-05 TAAGTTTTTT CGGTCATATAGTATAATAG GTCTTTTGCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSBYNYDTGGYBYAGTGG MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrVIII:388676-389232 4.1e-10 73_[-2]_8 chrXV:464218-464678 5.4e-10 50_[+2]_31 chrXIII:195888-196418 5.4e-10 49_[-2]_32 chrVI:101113-101689 9.1e-10 23_[+2]_58 chrXVI:435616-436240 1.9e-09 68_[-2]_13 chrVII:706941-707362 1.9e-09 60_[-2]_21 chrXIII:768202-768658 4.6e-09 43_[-2]_38 chrIV:410122-410705 4.6e-09 14_[+2]_67 chrX:197173-197637 5.6e-09 12_[-2]_69 chrXVI:856742-857120 8.3e-09 19_[+2]_62 chrVI:204813-205230 8.3e-09 7_[-2]_74 chrXVI:880117-880559 1e-08 63_[-2]_18 chrXII:1051908-1052396 1e-08 24_[-2]_57 chrXII:734517-735021 1e-08 81_[+2] chrV:443000-443510 1e-08 52_[-2]_29 chrV:551041-551713 1.2e-08 13_[-2]_68 chrXII:731858-732285 1.4e-08 67_[+2]_14 chrX:617708-618172 1.4e-08 27_[+2]_54 chrIV:488486-489167 1.4e-08 76_[-2]_5 chrIII:227754-228219 1.4e-08 4_[+2]_77 chrV:288174-288806 1.7e-08 66_[-2]_15 chrXV:854005-854436 2e-08 71_[-2]_10 chrXII:605144-605665 2e-08 60_[-2]_21 chrXII:214663-215191 2e-08 60_[-2]_21 chrIV:884141-884642 2e-08 18_[+2]_63 chrXI:46380-47151 2.4e-08 73_[-2]_8 chrXIII:258916-259523 2.8e-08 52_[-2]_29 chrI:182349-182811 2.8e-08 55_[-2]_26 chrX:523758-524341 3.2e-08 76_[-2]_5 chrIV:437477-438122 3.2e-08 21_[+2]_60 chrXI:162299-162822 4.3e-08 30_[-2]_51 chrII:405562-406212 4.3e-08 39_[+2]_42 chrVII:1003982-1004421 5.8e-08 63_[+2]_18 chrVII:661513-661952 5.8e-08 65_[+2]_16 chrIII:168118-168631 5.8e-08 30_[-2]_51 chrXVI:860097-860655 6.6e-08 51_[+2]_30 chrXI:307888-308557 6.6e-08 27_[-2]_54 chrX:531508-532233 6.6e-08 6_[+2]_75 chrX:396505-397065 6.6e-08 43_[-2]_38 chrVII:930836-931232 6.6e-08 21_[-2]_60 chrVII:823245-823705 6.6e-08 55_[+2]_26 chrVII:412082-412592 6.6e-08 62_[-2]_19 chrVI:161976-162485 6.6e-08 46_[+2]_35 chrV:469248-469694 6.6e-08 34_[+2]_47 chrIV:83342-83812 6.6e-08 19_[+2]_62 chrIII:142490-143020 6.6e-08 48_[-2]_33 chrXIII:420347-420926 7.6e-08 57_[-2]_24 chrV:438355-438994 7.6e-08 74_[+2]_7 chrII:326575-327150 7.6e-08 35_[-2]_46 chrXVI:572029-572560 8.7e-08 23_[+2]_58 chrXIV:96017-96663 8.7e-08 4_[-2]_77 chrXIII:183737-184198 8.7e-08 33_[-2]_48 chrXII:448475-449018 8.7e-08 7_[-2]_74 chrVIII:134029-134616 8.7e-08 47_[+2]_34 chrVI:191331-191830 8.7e-08 65_[-2]_16 chrIV:802546-803048 8.7e-08 37_[-2]_44 chrXVI:689334-689880 1.1e-07 6_[+2]_75 chrXV:353813-354331 1.1e-07 73_[-2]_8 chrII:266063-266750 1.1e-07 20_[+2]_61 chrXV:113391-114148 1.3e-07 81_[+2] chrXV:110845-111268 1.3e-07 9_[-2]_72 chrXI:458092-459052 1.3e-07 33_[+2]_48 chrVIII:115875-116431 1.3e-07 58_[-2]_23 chrVII:857241-857649 1.3e-07 78_[-2]_3 chrIV:1461414-1462225 1.3e-07 42_[-2]_39 chrIV:433962-434627 1.3e-07 74_[-2]_7 chrXI:83944-84411 1.8e-07 79_[+2]_2 chrX:424274-424790 1.8e-07 15_[-2]_66 chrV:99879-100342 2.3e-07 71_[+2]_10 chrXII:962787-963322 2.5e-07 33_[-2]_48 chrII:347360-347930 2.5e-07 6_[+2]_75 chrXVI:338562-339202 2.8e-07 69_[-2]_12 chrXV:709977-710518 2.8e-07 2_[+2]_79 chrIV:1256867-1257307 3.8e-07 24_[-2]_57 chrV:130834-131412 4.2e-07 62_[-2]_19 chrXIV:560569-561023 5.2e-07 1_[-2]_80 chrXIV:632372-632911 5.7e-07 6_[+2]_75 chrVI:137268-137812 5.7e-07 51_[-2]_30 chrIII:127513-127877 5.7e-07 69_[+2]_12 chrXV:487190-487707 6.2e-07 39_[+2]_42 chrXIV:631689-632168 6.2e-07 21_[-2]_60 chrVII:730828-731434 6.2e-07 54_[+2]_27 chrXII:489285-489563 6.8e-07 43_[+2]_38 chrXVI:810422-810919 7.5e-07 54_[+2]_27 chrXIV:374701-375086 7.5e-07 24_[+2]_57 chrIV:1095125-1095760 7.5e-07 51_[-2]_30 chrXVI:560017-560520 1.1e-06 53_[-2]_28 chrXIII:352088-352497 1.1e-06 36_[+2]_45 chrVIII:237717-238173 1.1e-06 26_[-2]_55 chrII:36166-36638 1.1e-06 44_[+2]_37 chrII:350563-351177 1.4e-06 5_[+2]_76 chrX:690507-690848 1.6e-06 41_[-2]_40 chrXI:282824-284844 1.8e-06 72_[-2]_9 chrX:422570-423268 2.1e-06 66_[+2]_15 chrXIII:572666-573192 2.2e-06 58_[-2]_23 chrXIII:362854-363324 2.4e-06 23_[+2]_58 chrVIII:62550-63042 2.4e-06 7_[+2]_74 chrVII:110384-110936 2.4e-06 68_[-2]_13 chrXVI:581820-582364 2.6e-06 18_[+2]_63 chrXV:976183-976689 2.6e-06 33_[+2]_48 chrVII:876137-876660 2.6e-06 44_[+2]_37 chrIV:1352318-1352749 2.6e-06 37_[-2]_44 chrV:434390-434768 3e-06 65_[-2]_16 chrX:538342-538761 6.1e-06 52_[+2]_29 chrIV:1450272-1450421 6.1e-06 9_[+2]_72 chrXIV:6494-7166 8.4e-06 2_[-2]_79 chrXI:302657-303254 8.9e-06 11_[+2]_70 chrX:415691-416313 8.9e-06 66_[-2]_15 chrVIII:475531-475931 9.5e-06 79_[-2]_2 chrIV:1075313-1075739 9.5e-06 50_[-2]_31 chrXVI:627348-627688 1e-05 76_[+2]_5 chrXV:281675-282514 1.4e-05 78_[+2]_3 chrXV:438393-438979 3.1e-05 14_[+2]_67 chrVIII:488258-488613 4.4e-05 22_[-2]_59 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSBYNYDTGGYBYAGTGG MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WGSBYNYDTGGYBYAGTGG width=19 seqs=114 chrVIII:388676-389232 ( 74) TGGGCGTGTGGTCTAGTGG 1 chrXV:464218-464678 ( 51) AGGGCGTGTGGTCTAGTGG 1 chrXIII:195888-196418 ( 50) AGGGCGTGTGGTCTAGTGG 1 chrVI:101113-101689 ( 24) CGGGCGTGTGGTCTAGTGG 1 chrXVI:435616-436240 ( 69) AGCTCGTATGGCGCAGTGG 1 chrVII:706941-707362 ( 61) AGCTCGTATGGCGCAGTGG 1 chrXIII:768202-768658 ( 44) TGGGCGTGTGGCGTAGTCG 1 chrIV:410122-410705 ( 15) TGGGCGTGTGGCGTAGTCG 1 chrX:197173-197637 ( 13) AGGGCGTGTGGCGTAGTCG 1 chrXVI:856742-857120 ( 20) CGGGCGTGTGGCGTAGTCG 1 chrVI:204813-205230 ( 8) CGGGCGTGTGGCGTAGTCG 1 chrXVI:880117-880559 ( 64) TGGTCTCTTGGCCCAGTTG 1 chrXII:1051908-1052396 ( 25) TGGTCTCTTGGCCCAGTTG 1 chrXII:734517-735021 ( 82) TGGTCTCTTGGCCCAGTTG 1 chrV:443000-443510 ( 53) TGGTCTCTTGGCCCAGTTG 1 chrV:551041-551713 ( 14) AGGTCTCTTGGCCCAGTTG 1 chrXII:731858-732285 ( 68) TGGGAGTTTGGCCGAGTGG 1 chrX:617708-618172 ( 28) TGGGAGTTTGGCCGAGTGG 1 chrIV:488486-489167 ( 77) CGGTCCAATGGTCCAGTGG 1 chrIII:227754-228219 ( 5) TGGCACTATGGCCGAGTGG 1 chrV:288174-288806 ( 67) AGGCACTATGGCCGAGTGG 1 chrXV:854005-854436 ( 72) AGGGCACATGGCGCAGTTG 1 chrXII:605144-605665 ( 61) TGCTCGTGTAGCTCAGTGG 1 chrXII:214663-215191 ( 61) AGGGCACATGGCGCAGTTG 1 chrIV:884141-884642 ( 19) TGCTCGTGTAGCTCAGTGG 1 chrXI:46380-47151 ( 74) AGCCCTTTTGGCCAAGTGG 1 chrXIII:258916-259523 ( 53) TGGCAACTTGGCCGAGTGG 1 chrI:182349-182811 ( 56) TGGCAACTTGGCCGAGTGG 1 chrX:523758-524341 ( 77) AGGCAACTTGGCCGAGTGG 1 chrIV:437477-438122 ( 22) AGGCAACTTGGCCGAGTGG 1 chrXI:162299-162822 ( 31) AGCTCGCGTGGCGTAATGG 1 chrII:405562-406212 ( 40) AGCTCGCGTGGCGTAATGG 1 chrVII:1003982-1004421 ( 64) TGCCTCCTTAGCTTAGTGG 1 chrVII:661513-661952 ( 66) TGCCTCCTTAGCTTAGTGG 1 chrIII:168118-168631 ( 31) TGGTCCTATAGTGTAGTGG 1 chrXVI:860097-860655 ( 52) AGCGCAAGTGGTTTAGTGG 1 chrXI:307888-308557 ( 28) TGGTTTCGTGGTCTAGTCG 1 chrX:531508-532233 ( 7) AGCGCAAGTGGTTTAGTGG 1 chrX:396505-397065 ( 44) AGCGCAAGTGGTTTAGTGG 1 chrVII:930836-931232 ( 22) AGCGCAAGTGGTTTAGTGG 1 chrVII:823245-823705 ( 56) TGGTTTCGTGGTCTAGTCG 1 chrVII:412082-412592 ( 63) TGGTTTCGTGGTCTAGTCG 1 chrVI:161976-162485 ( 47) AGCGCAAGTGGTTTAGTGG 1 chrV:469248-469694 ( 35) TGGTTTCGTGGTCTAGTCG 1 chrIV:83342-83812 ( 20) AGCGCAAGTGGTTTAGTGG 1 chrIII:142490-143020 ( 49) AGCGCAAGTGGTTTAGTGG 1 chrXIII:420347-420926 ( 58) AGGTTTCGTGGTCTAGTCG 1 chrV:438355-438994 ( 75) AGGTTTCGTGGTCTAGTCG 1 chrII:326575-327150 ( 36) GGGTCCAATGGTCCAGTGG 1 chrXVI:572029-572560 ( 24) CGCGCAAGTGGTTTAGTGG 1 chrXIV:96017-96663 ( 5) TGGGCGGTTAGTGTAGTGG 1 chrXIII:183737-184198 ( 34) CGCGCAAGTGGTTTAGTGG 1 chrXII:448475-449018 ( 8) CGGTCCTATAGTGTAGTGG 1 chrVIII:134029-134616 ( 48) CGGTCCTATAGTGTAGTGG 1 chrVI:191331-191830 ( 66) TGTCCCAGTGGCCGAGTGG 1 chrIV:802546-803048 ( 38) CGGTCCTATAGTGTAGTGG 1 chrXVI:689334-689880 ( 7) GGGCACTATGGCCGAGTGG 1 chrXV:353813-354331 ( 74) TGCTTCTATGGCCAAGTTG 1 chrII:266063-266750 ( 21) TGCTTCTATGGCCAAGTTG 1 chrXV:113391-114148 ( 82) AGCTTCTATGGCCAAGTTG 1 chrXV:110845-111268 ( 10) CGGGCGGTTAGTGTAGTGG 1 chrXI:458092-459052 ( 34) TGGTTGTTTGGCCGAGCGG 1 chrVIII:115875-116431 ( 59) AGCTTCTATGGCCAAGTTG 1 chrVII:857241-857649 ( 79) TGGTTGTTTGGCCGAGCGG 1 chrIV:1461414-1462225 ( 43) TGGTTGTTTGGCCGAGCGG 1 chrIV:433962-434627 ( 75) AGCTTCTATGGCCAAGTTG 1 chrXI:83944-84411 ( 80) TGGAGGGTTGGCCGAGTGG 1 chrX:424274-424790 ( 16) TGGAGGGTTGGCCGAGTGG 1 chrV:99879-100342 ( 72) AAGCGCCGTGGCGCAGTGG 1 chrXII:962787-963322 ( 34) CGGAGGGTTGGCCGAGTGG 1 chrII:347360-347930 ( 7) CGGAGGGTTGGCCGAGTGG 1 chrXVI:338562-339202 ( 70) CAGCGCCGTGGCGCAGTGG 1 chrXV:709977-710518 ( 3) CAGCGCCGTGGCGCAGTGG 1 chrIV:1256867-1257307 ( 25) AGCGAAAGTGGTTCAGTGG 1 chrV:130834-131412 ( 63) AGGTTTTATAGTGTAGTGG 1 chrXIV:560569-561023 ( 2) GGCTTCTATGGCCAAGTTG 1 chrXIV:632372-632911 ( 7) TGACTCCATGGCCAAGTTG 1 chrVI:137268-137812 ( 52) TGACTCCATGGCCAAGTTG 1 chrIII:127513-127877 ( 70) TGACTCCATGGCCAAGTTG 1 chrXV:487190-487707 ( 40) AGACTCCATGGCCAAGTTG 1 chrXIV:631689-632168 ( 22) CGGGCGTGTGGTCTAGAGG 1 chrVII:730828-731434 ( 55) AGACTCCATGGCCAAGTTG 1 chrXII:489285-489563 ( 44) TGACCGAGTAGTGTAGTGG 1 chrXVI:810422-810919 ( 55) CGACTCCATGGCCAAGTTG 1 chrXIV:374701-375086 ( 25) AGCGGACTTAGCTCAGTTG 1 chrIV:1095125-1095760 ( 52) AGCGGACTTAGCTCAGTTG 1 chrXVI:560017-560520 ( 54) AGCGGATTTAGCTCAGTTG 1 chrXIII:352088-352497 ( 37) AGCGGATTTAGCTCAGTTG 1 chrVIII:237717-238173 ( 27) AGCGGATTTAGCTCAGTTG 1 chrII:36166-36638 ( 45) AGCGGATTTAGCTCAGTTG 1 chrII:350563-351177 ( 6) GGGTTTTATAGTGTAGTGG 1 chrX:690507-690848 ( 42) TGCCCTGGTGGTAAAGTTG 1 chrXI:282824-284844 ( 73) TGCTTCTTTGGTGGAGTGT 1 chrX:422570-423268 ( 67) TGCTTCAGTAGCTCAGTAG 1 chrXIII:572666-573192 ( 59) AGCTTCAGTAGCTCAGTAG 1 chrXIII:362854-363324 ( 24) TGCCATCTTAGTATAGTGG 1 chrVIII:62550-63042 ( 8) TGCCATCTTAGTATAGTGG 1 chrVII:110384-110936 ( 69) TGCCATCTTAGTATAGTGG 1 chrXVI:581820-582364 ( 19) AGCCTTGTTGGCGCAATCG 1 chrXV:976183-976689 ( 34) CGCTTCAGTAGCTCAGTAG 1 chrVII:876137-876660 ( 45) AGCCTTGTTGGCGCAATCG 1 chrIV:1352318-1352749 ( 38) AGCCTTGTTGGCGCAATCG 1 chrV:434390-434768 ( 66) CGCCATCTTAGTATAGTGG 1 chrX:538342-538761 ( 53) GGTTCCGTTGGCGTAATGG 1 chrIV:1450272-1450421 ( 10) TGCCTTGGCAGCCCAGTTG 1 chrXIV:6494-7166 ( 3) GAGTGGTATGGTTGAGTGG 1 chrXI:302657-303254 ( 12) TGAAGCGGTGGCTCAATGG 1 chrX:415691-416313 ( 67) TGAAGCGGTGGCTCAATGG 1 chrVIII:475531-475931 ( 80) TGTTCCAATAGTGTAGCGG 1 chrIV:1075313-1075739 ( 51) TGTTCCAATAGTGTAGCGG 1 chrXVI:627348-627688 ( 77) TGCGTGGGTGGTATAGTTT 1 chrXV:281675-282514 ( 79) CGCTTAAATAGAGGAGTGG 1 chrXV:438393-438979 ( 15) AGCTCAGTTGGTAGAGCGT 1 chrVIII:488258-488613 ( 23) CGGTCATATAGTATAATAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSBYNYDTGGYBYAGTGG MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 19 n= 45756 bayes= 10.8721 E= 7.9e-237 23 -8 -182 36 -316 -1348 237 -1348 -199 115 135 -316 -258 50 64 33 -135 121 -41 -3 -52 76 50 -64 -84 76 -41 23 -16 -1348 102 12 -1348 -440 -1348 166 -21 -1348 197 -1348 -1348 -1348 243 -1348 -516 170 -1348 30 -216 121 55 -46 -135 59 -1 39 167 -1348 -1348 -1348 -199 -1348 231 -1348 -516 -182 -1348 158 -316 -60 168 -35 -1348 -1348 239 -358 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSBYNYDTGGYBYAGTGG MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 19 nsites= 114 E= 7.9e-237 0.368421 0.175439 0.052632 0.403509 0.035088 0.000000 0.964912 0.000000 0.078947 0.412281 0.473684 0.035088 0.052632 0.263158 0.289474 0.394737 0.122807 0.429825 0.140351 0.307018 0.219298 0.315789 0.263158 0.201754 0.175439 0.315789 0.140351 0.368421 0.280702 0.000000 0.377193 0.342105 0.000000 0.008772 0.000000 0.991228 0.271930 0.000000 0.728070 0.000000 0.000000 0.000000 1.000000 0.000000 0.008772 0.605263 0.000000 0.385965 0.070175 0.429825 0.271930 0.228070 0.122807 0.280702 0.184211 0.412281 1.000000 0.000000 0.000000 0.000000 0.078947 0.000000 0.921053 0.000000 0.008772 0.052632 0.000000 0.938596 0.035088 0.122807 0.596491 0.245614 0.000000 0.000000 0.973684 0.026316 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSBYNYDTGGYBYAGTGG MEME-2 regular expression -------------------------------------------------------------------------------- [TA]G[GC][TGC][CT][CGAT][TC][GTA]T[GA]G[CT][CGT][TC]AGT[GT]G -------------------------------------------------------------------------------- Time 584.55 secs. ******************************************************************************** ******************************************************************************** MOTIF WGATTWHSAGTCWKRCGCCYT MEME-3 width = 21 sites = 54 llr = 878 E-value = 1.4e-133 ******************************************************************************** -------------------------------------------------------------------------------- Motif WGATTWHSAGTCWKRCGCCYT MEME-3 Description -------------------------------------------------------------------------------- Simplified A 4181:442a2::3:4:::::: pos.-specific C 11::3:24:::9:11a:a64: probability G :6::::12:8:1153:a:3:: matrix T 52297632::a:642:::16a bits 2.4 ** 2.2 * *** 1.9 * *** 1.7 * * *** * Relative 1.5 **** *** * Entropy 1.2 **** *** * (23.5 bits) 1.0 ** **** ****** 0.7 **** **** * ****** 0.5 ****** ****** ****** 0.2 ****** ************** 0.0 --------------------- Multilevel TGATTTACAGTCTGACGCCTT consensus A CATG A ATG GC sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGATTWHSAGTCWKRCGCCYT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXVI:689334-689880 - 28 8.36e-10 AGAGCCCAAC AGATTTCAAGTCTGTCGCCTT AACCACTCGG chrV:288174-288806 + 44 8.36e-10 AGAGCCCAAC AGATTTCAAGTCTGTCGCCTT AACCACTCGG chrXVI:581820-582364 - 40 1.13e-09 CCTAACCTTA TGATTAAGAGTCATACGCGCT ACCGATTGCG chrXIII:480387-480889 + 65 1.13e-09 CCTAACCTTA TGATTAAGAGTCATACGCGCT ACCGATTGCG chrX:414737-415293 - 21 1.13e-09 CCTAACCTTA TGATTAAGAGTCATACGCGCT ACCGATTGCG chrVII:876137-876660 - 66 1.13e-09 CCTAACCTTA TGATTAAGAGTCATACGCGCT ACCGATTGCG chrVII:185459-185979 + 77 1.13e-09 CCTAACCTTA TGATTAAGAGTCATACGCGCT ACC chrVII:122093-122571 - 7 1.13e-09 CCTAACCTTA TGATTAAGAGTCATACGCGCT ACCGAT chrVI:226432-226971 + 69 1.13e-09 CCTAACCTTA TGATTAAGAGTCATACGCGCT ACCGATTGCG chrV:135139-135743 + 66 1.13e-09 CCTAACCTTA TGATTAAGAGTCATACGCGCT ACCGATTGCG chrIV:1352318-1352749 + 15 1.13e-09 CCTAACCTTA TGATTAAGAGTCATACGCGCT ACCGATTGCG chrIV:1201500-1202128 - 6 1.13e-09 CCTAACCTTA TGATTAAGAGTCATACGCGCT ACCGA chrXII:962787-963322 + 10 2.02e-09 CCGTCCAAC AGATCTTAAGTCTGCCGCCTT AGACCACTCG chrIV:519523-520092 - 7 2.02e-09 ACCGTCCAAC AGATCTTAAGTCTGCCGCCTT AGACCA chrII:347360-347930 - 29 2.02e-09 ACCGTCCAAC AGATCTTAAGTCTGCCGCCTT AGACCACTCG chrII:9315-9979 - 7 2.02e-09 ACCGTCCAAC AGATCTTAAGTCTGCCGCCTT AGACCA chrXVI:810422-810919 - 77 3.47e-09 TTG CGATTAACAGTCGCACGCCTT AACCAACTTG chrXV:487190-487707 - 62 3.47e-09 CACGATCTTG CGATTAACAGTCGCACGCCTT AACCAACTTG chrXIV:632372-632911 - 29 3.47e-09 CACGATCTTG CGATTAACAGTCGCACGCCTT AACCAACTTG chrXII:975700-976280 + 75 3.47e-09 CACGATCTTG CGATTAACAGTCGCACGCCTT AACCA chrXI:162299-162822 + 9 3.47e-09 TAATCTTC TGATTAGAAGTCAGACGCGTT GCCATTACGC chrX:355097-355746 - 22 3.47e-09 CATAATCTTC TGATTAGAAGTCAGACGCGTT GCCATTACGC chrVII:730828-731434 - 77 3.47e-09 TTG CGATTAACAGTCGCACGCCTT AACCAACTTG chrVI:137268-137812 + 28 3.47e-09 CACGATCTTG CGATTAACAGTCGCACGCCTT AACCAACTTG chrII:405562-406212 - 60 3.47e-09 CATAATCTTC TGATTAGAAGTCAGACGCGTT GCCATTACGC chrXIII:837668-838264 - 34 7.33e-09 TTCGTAGTGG TAAATTACAGTCTTGCGCCTT AAACCAACTT chrXIII:168566-169098 - 35 7.33e-09 TTCGTAGTGG TAAATTACAGTCTTGCGCCTT AAACCAACTT chrX:542739-543274 + 46 7.33e-09 TTCGTAGTGA TAAATTACAGTCTTGCGCCTT AAACCAACTT chrX:354009-354575 - 24 7.33e-09 TTCGTAGTGG TAAATTACAGTCTTGCGCCTT AAACCAACTT chrVI:210427-210920 + 42 7.33e-09 TTCGTAGTGG TAAATTACAGTCTTGCGCCTT AAACCAACTT chrVI:167243-167682 - 47 7.33e-09 TTCGTAGTGG TAAATTACAGTCTTGCGCCTT AAACCAACTT chrXIII:258916-259523 + 30 2.16e-08 AAAGCCCAAA AGATTTCTAATCTTTCGCCTT AACCACTCGG chrX:523758-524341 + 54 2.16e-08 AAAGCCCAAA AGATTTCTAATCTTTCGCCTT AACCACTCGG chrVII:561398-561956 + 76 2.16e-08 AAAGCCCAAA AGATTTCTAATCTTTCGCCTT AACC chrIV:980728-981268 + 67 2.16e-08 AAAGCCCAAA AGATTTCTAATCTTTCGCCTT AACCACTCGG chrIV:437477-438122 - 43 2.16e-08 AAAGCCCAAA AGATTTCTAATCTTTCGCCTT AACCACTCGG chrI:182349-182811 + 33 2.16e-08 AAAGCCCAAA AGATTTCTAATCTTTCGCCTT AACCACTCGG chrXVI:622322-622839 + 61 3.82e-08 GACCGAAGTT TTTTCTTCAGTCTGGCGCTCT CCCAACTGAG chrXVI:560017-560520 + 31 3.82e-08 GACCGAAGTT TTTTCTTCAGTCTGGCGCTCT CCCAACTGAG chrXIV:374701-375086 - 46 3.82e-08 TGACCGAAGT TTTTCTTCAGTCTGGCGCTCT CCCAACTGAG chrVIII:237717-238173 + 4 3.82e-08 GTT TTTTCTTCAGTCTGGCGCTCT CCCAACTGAG chrIV:1095125-1095760 + 29 3.82e-08 GACCAAAGTT TTTTCTTCAGTCTGGCGCTCT CCCAACTGAG chrII:36166-36638 - 66 3.82e-08 TGACCGAAGT TTTTCTTCAGTCTGGCGCTCT CCCAACTGAG chrXIII:352088-352497 - 58 5.43e-08 TGACCGAAGT ATTTCTTCAGTCTGGCGCTCT CCCAACTGAG chrVIII:115875-116431 + 36 5.43e-08 GATGATCTCC ACATTACTAGTGTGGCGCCTT ACCAACTTGG chrIV:433962-434627 + 52 5.43e-08 GATGATCTCC ACATTACTAGTGTGGCGCCTT ACCAACTTGG chrII:266063-266750 - 42 5.43e-08 GATGATCTCC ACATTACTAGTGTGGCGCCTT ACCAACTTGG chrIV:1461414-1462225 + 19 9.57e-08 GGTCAAGATT TTTTCTTGAATCAGGCGCCTT AGACCGCTCG chrXI:458092-459052 - 56 1.29e-07 CGGTCAAGAT ATTTCTTGAATCAGGCGCCTT AGACCGCTCG chrXVI:435616-436240 + 47 2.09e-07 AAGGACCAAC AGATTTGCAATCTGCTGCGCT ACCACTGCGC chrVII:706941-707362 + 39 2.09e-07 AAGGACCAAC AGATTTGCAATCTGCTGCGCT ACCACTGCGC chrIII:227754-228219 - 26 3.04e-07 AACTTTTTAT TCCATTCGAGTCTCTCGCCTT AACCACTCGG chrX:617708-618172 - 50 1.56e-06 AGAGGTTAAA TCCACCTAAATCTGACGCCTT AAACCACTCG chrIV:619648-620395 + 30 3.27e-06 TGGAATCTTC TGGTTCGTAGCCAGACGCCGT GACCATTGGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGATTWHSAGTCWKRCGCCYT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXVI:689334-689880 8.4e-10 27_[-3]_52 chrV:288174-288806 8.4e-10 43_[+3]_36 chrXVI:581820-582364 1.1e-09 39_[-3]_40 chrXIII:480387-480889 1.1e-09 64_[+3]_15 chrX:414737-415293 1.1e-09 20_[-3]_59 chrVII:876137-876660 1.1e-09 65_[-3]_14 chrVII:185459-185979 1.1e-09 76_[+3]_3 chrVII:122093-122571 1.1e-09 6_[-3]_73 chrVI:226432-226971 1.1e-09 68_[+3]_11 chrV:135139-135743 1.1e-09 65_[+3]_14 chrIV:1352318-1352749 1.1e-09 14_[+3]_65 chrIV:1201500-1202128 1.1e-09 5_[-3]_74 chrXII:962787-963322 2e-09 9_[+3]_70 chrIV:519523-520092 2e-09 6_[-3]_73 chrII:347360-347930 2e-09 28_[-3]_51 chrII:9315-9979 2e-09 6_[-3]_73 chrXVI:810422-810919 3.5e-09 76_[-3]_3 chrXV:487190-487707 3.5e-09 61_[-3]_18 chrXIV:632372-632911 3.5e-09 28_[-3]_51 chrXII:975700-976280 3.5e-09 74_[+3]_5 chrXI:162299-162822 3.5e-09 8_[+3]_71 chrX:355097-355746 3.5e-09 21_[-3]_58 chrVII:730828-731434 3.5e-09 76_[-3]_3 chrVI:137268-137812 3.5e-09 27_[+3]_52 chrII:405562-406212 3.5e-09 59_[-3]_20 chrXIII:837668-838264 7.3e-09 33_[-3]_46 chrXIII:168566-169098 7.3e-09 34_[-3]_45 chrX:542739-543274 7.3e-09 45_[+3]_34 chrX:354009-354575 7.3e-09 23_[-3]_56 chrVI:210427-210920 7.3e-09 41_[+3]_38 chrVI:167243-167682 7.3e-09 46_[-3]_33 chrXIII:258916-259523 2.2e-08 29_[+3]_50 chrX:523758-524341 2.2e-08 53_[+3]_26 chrVII:561398-561956 2.2e-08 75_[+3]_4 chrIV:980728-981268 2.2e-08 66_[+3]_13 chrIV:437477-438122 2.2e-08 42_[-3]_37 chrI:182349-182811 2.2e-08 32_[+3]_47 chrXVI:622322-622839 3.8e-08 60_[+3]_19 chrXVI:560017-560520 3.8e-08 30_[+3]_49 chrXIV:374701-375086 3.8e-08 45_[-3]_34 chrVIII:237717-238173 3.8e-08 3_[+3]_76 chrIV:1095125-1095760 3.8e-08 28_[+3]_51 chrII:36166-36638 3.8e-08 65_[-3]_14 chrXIII:352088-352497 5.4e-08 57_[-3]_22 chrVIII:115875-116431 5.4e-08 35_[+3]_44 chrIV:433962-434627 5.4e-08 51_[+3]_28 chrII:266063-266750 5.4e-08 41_[-3]_38 chrIV:1461414-1462225 9.6e-08 18_[+3]_61 chrXI:458092-459052 1.3e-07 55_[-3]_24 chrXVI:435616-436240 2.1e-07 46_[+3]_33 chrVII:706941-707362 2.1e-07 38_[+3]_41 chrIII:227754-228219 3e-07 25_[-3]_54 chrX:617708-618172 1.6e-06 49_[-3]_30 chrIV:619648-620395 3.3e-06 29_[+3]_50 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGATTWHSAGTCWKRCGCCYT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WGATTWHSAGTCWKRCGCCYT width=21 seqs=54 chrXVI:689334-689880 ( 28) AGATTTCAAGTCTGTCGCCTT 1 chrV:288174-288806 ( 44) AGATTTCAAGTCTGTCGCCTT 1 chrXVI:581820-582364 ( 40) TGATTAAGAGTCATACGCGCT 1 chrXIII:480387-480889 ( 65) TGATTAAGAGTCATACGCGCT 1 chrX:414737-415293 ( 21) TGATTAAGAGTCATACGCGCT 1 chrVII:876137-876660 ( 66) TGATTAAGAGTCATACGCGCT 1 chrVII:185459-185979 ( 77) TGATTAAGAGTCATACGCGCT 1 chrVII:122093-122571 ( 7) TGATTAAGAGTCATACGCGCT 1 chrVI:226432-226971 ( 69) TGATTAAGAGTCATACGCGCT 1 chrV:135139-135743 ( 66) TGATTAAGAGTCATACGCGCT 1 chrIV:1352318-1352749 ( 15) TGATTAAGAGTCATACGCGCT 1 chrIV:1201500-1202128 ( 6) TGATTAAGAGTCATACGCGCT 1 chrXII:962787-963322 ( 10) AGATCTTAAGTCTGCCGCCTT 1 chrIV:519523-520092 ( 7) AGATCTTAAGTCTGCCGCCTT 1 chrII:347360-347930 ( 29) AGATCTTAAGTCTGCCGCCTT 1 chrII:9315-9979 ( 7) AGATCTTAAGTCTGCCGCCTT 1 chrXVI:810422-810919 ( 77) CGATTAACAGTCGCACGCCTT 1 chrXV:487190-487707 ( 62) CGATTAACAGTCGCACGCCTT 1 chrXIV:632372-632911 ( 29) CGATTAACAGTCGCACGCCTT 1 chrXII:975700-976280 ( 75) CGATTAACAGTCGCACGCCTT 1 chrXI:162299-162822 ( 9) TGATTAGAAGTCAGACGCGTT 1 chrX:355097-355746 ( 22) TGATTAGAAGTCAGACGCGTT 1 chrVII:730828-731434 ( 77) CGATTAACAGTCGCACGCCTT 1 chrVI:137268-137812 ( 28) CGATTAACAGTCGCACGCCTT 1 chrII:405562-406212 ( 60) TGATTAGAAGTCAGACGCGTT 1 chrXIII:837668-838264 ( 34) TAAATTACAGTCTTGCGCCTT 1 chrXIII:168566-169098 ( 35) TAAATTACAGTCTTGCGCCTT 1 chrX:542739-543274 ( 46) TAAATTACAGTCTTGCGCCTT 1 chrX:354009-354575 ( 24) TAAATTACAGTCTTGCGCCTT 1 chrVI:210427-210920 ( 42) TAAATTACAGTCTTGCGCCTT 1 chrVI:167243-167682 ( 47) TAAATTACAGTCTTGCGCCTT 1 chrXIII:258916-259523 ( 30) AGATTTCTAATCTTTCGCCTT 1 chrX:523758-524341 ( 54) AGATTTCTAATCTTTCGCCTT 1 chrVII:561398-561956 ( 76) AGATTTCTAATCTTTCGCCTT 1 chrIV:980728-981268 ( 67) AGATTTCTAATCTTTCGCCTT 1 chrIV:437477-438122 ( 43) AGATTTCTAATCTTTCGCCTT 1 chrI:182349-182811 ( 33) AGATTTCTAATCTTTCGCCTT 1 chrXVI:622322-622839 ( 61) TTTTCTTCAGTCTGGCGCTCT 1 chrXVI:560017-560520 ( 31) TTTTCTTCAGTCTGGCGCTCT 1 chrXIV:374701-375086 ( 46) TTTTCTTCAGTCTGGCGCTCT 1 chrVIII:237717-238173 ( 4) TTTTCTTCAGTCTGGCGCTCT 1 chrIV:1095125-1095760 ( 29) TTTTCTTCAGTCTGGCGCTCT 1 chrII:36166-36638 ( 66) TTTTCTTCAGTCTGGCGCTCT 1 chrXIII:352088-352497 ( 58) ATTTCTTCAGTCTGGCGCTCT 1 chrVIII:115875-116431 ( 36) ACATTACTAGTGTGGCGCCTT 1 chrIV:433962-434627 ( 52) ACATTACTAGTGTGGCGCCTT 1 chrII:266063-266750 ( 42) ACATTACTAGTGTGGCGCCTT 1 chrIV:1461414-1462225 ( 19) TTTTCTTGAATCAGGCGCCTT 1 chrXI:458092-459052 ( 56) ATTTCTTGAATCAGGCGCCTT 1 chrXVI:435616-436240 ( 47) AGATTTGCAATCTGCTGCGCT 1 chrVII:706941-707362 ( 39) AGATTTGCAATCTGCTGCGCT 1 chrIII:227754-228219 ( 26) TCCATTCGAGTCTCTCGCCTT 1 chrX:617708-618172 ( 50) TCCACCTAAATCTGACGCCTT 1 chrIV:619648-620395 ( 30) TGGTTCGTAGCCAGACGCCGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGATTWHSAGTCWKRCGCCYT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 44640 bayes= 6.71678 E= 1.4e-133 16 -74 -1240 77 -150 -101 176 -91 131 -233 -333 -91 -108 -1240 -1240 144 -1240 48 -1240 124 38 -233 -1240 82 38 26 -74 -28 -76 106 37 -76 167 -1240 -1240 -1240 -62 -1240 210 -1240 -1240 -333 -1240 164 -1240 234 -174 -1240 -8 -1240 -74 92 -1240 -52 132 38 31 -74 84 -91 -1240 237 -1240 -308 -1240 -1240 243 -1240 -1240 243 -1240 -1240 -1240 167 58 -128 -1240 92 -333 100 -1240 -1240 -1240 167 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGATTWHSAGTCWKRCGCCYT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 54 E= 1.4e-133 0.351852 0.111111 0.000000 0.537037 0.111111 0.092593 0.629630 0.166667 0.777778 0.037037 0.018519 0.166667 0.148148 0.000000 0.000000 0.851852 0.000000 0.259259 0.000000 0.740741 0.407407 0.037037 0.000000 0.555556 0.407407 0.222222 0.111111 0.259259 0.185185 0.388889 0.240741 0.185185 1.000000 0.000000 0.000000 0.000000 0.203704 0.000000 0.796296 0.000000 0.000000 0.018519 0.000000 0.981481 0.000000 0.944444 0.055556 0.000000 0.296296 0.000000 0.111111 0.592593 0.000000 0.129630 0.462963 0.407407 0.388889 0.111111 0.333333 0.166667 0.000000 0.962963 0.000000 0.037037 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.592593 0.277778 0.129630 0.000000 0.351852 0.018519 0.629630 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGATTWHSAGTCWKRCGCCYT MEME-3 regular expression -------------------------------------------------------------------------------- [TA]GAT[TC][TA][ATC][CG]A[GA]TC[TA][GT][AG]CGC[CG][TC]T -------------------------------------------------------------------------------- Time 845.19 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrI:3-1086 1.61e-01 100 chrI:71893-73637 8.16e-01 100 chrI:81853-82327 1.36e-01 100 chrI:138916-139542 7.98e-05 45_[-1(5.80e-09)]_34 chrI:142090-143621 2.07e-01 100 chrI:166026-166810 9.37e-01 100 chrI:180898-181509 2.78e-05 8_[-3(1.29e-07)]_42_[-1(6.48e-05)]_\ 8 chrI:182349-182811 9.62e-14 [+1(5.44e-08)]_11_[+3(2.16e-08)]_2_\ [-2(2.77e-08)]_26 chrI:183002-183174 6.69e-01 100 chrI:229132-230194 1.72e-01 100 chrII:9315-9979 3.22e-09 6_[-3(2.02e-09)]_12_[-1(2.49e-07)]_\ 40 chrII:36166-36638 1.82e-07 44_[+2(1.07e-06)]_2_[-3(3.82e-08)]_\ 14 chrII:44976-45392 5.95e-01 100 chrII:45571-46303 1.75e-01 100 chrII:60702-61433 5.56e-01 100 chrII:87972-88576 9.10e-01 100 chrII:88951-90006 3.84e-01 100 chrII:165052-165447 1.23e-01 100 chrII:165619-165779 1.23e-01 100 chrII:167838-168941 9.68e-01 100 chrII:181285-181669 8.49e-01 100 chrII:196840-197884 9.21e-01 100 chrII:226831-227665 3.83e-02 9_[-3(3.09e-05)]_70 chrII:266063-266750 5.50e-13 20_[+2(1.12e-07)]_2_[-3(5.43e-08)]_\ 2_[-1(3.39e-08)]_15 chrII:326575-327150 1.26e-05 35_[-2(7.59e-08)]_46 chrII:332295-333502 1.00e+00 100 chrII:347360-347930 3.49e-13 6_[+2(2.52e-07)]_3_[-3(2.02e-09)]_\ 12_[-1(2.49e-07)]_18 chrII:350563-351177 1.18e-08 5_[+2(1.38e-06)]_24_[-1(1.14e-09)]_\ 31 chrII:405222-405383 3.37e-02 57_[-1(8.57e-05)]_22 chrII:405562-406212 5.74e-10 39_[+2(4.34e-08)]_1_[-3(3.47e-09)]_\ 20 chrII:415470-415951 7.09e-01 100 chrII:476809-477748 5.01e-01 100 chrII:504466-504727 3.15e-01 100 chrII:544456-544797 3.23e-01 100 chrII:592265-593320 4.90e-01 100 chrII:604081-607045 8.60e-01 100 chrII:642834-643411 3.89e-01 100 chrII:644974-645497 5.24e-06 23_[-1(9.83e-10)]_56 chrII:680043-682207 1.56e-01 100 chrIII:0-1478 8.38e-01 100 chrIII:11056-11548 9.50e-01 100 chrIII:14014-16480 6.96e-01 100 chrIII:58739-59006 5.99e-01 100 chrIII:78430-78765 9.11e-02 100 chrIII:81983-82769 1.00e+00 100 chrIII:123335-123824 7.75e-09 56_[+1(1.81e-13)]_23 chrIII:127513-127877 2.78e-03 69_[+2(5.67e-07)]_12 chrIII:142490-143020 1.80e-11 4_[+1(4.85e-11)]_23_[-2(6.63e-08)]_\ 33 chrIII:162469-163144 7.64e-01 100 chrIII:163305-163901 7.36e-01 100 chrIII:168118-168631 1.04e-04 30_[-2(5.78e-08)]_51 chrIII:177073-178822 8.67e-01 100 chrIII:227754-228219 2.63e-12 4_[+2(1.43e-08)]_2_[-3(3.04e-07)]_\ 30_[-1(2.49e-07)]_3 chrIII:238458-238930 2.35e-02 44_[+1(4.10e-05)]_35 chrIII:292310-293067 7.84e-01 100 chrIII:294624-295916 6.42e-01 100 chrIII:315627-316619 5.43e-01 100 chrIV:27-338 1.50e-01 100 chrIV:83342-83812 1.80e-11 19_[+2(6.63e-08)]_23_[-1(4.85e-11)]_\ 18 chrIV:117054-118252 2.36e-01 100 chrIV:118431-119010 5.40e-01 100 chrIV:129914-131197 8.16e-01 100 chrIV:217149-218055 6.03e-01 100 chrIV:220855-222408 2.71e-01 100 chrIV:229390-230708 4.87e-01 100 chrIV:307606-308954 8.52e-01 100 chrIV:321538-322020 6.85e-02 7_[+3(8.63e-05)]_72 chrIV:340153-341651 9.35e-01 100 chrIV:358078-358489 9.95e-01 100 chrIV:359103-359864 3.99e-01 100 chrIV:410122-410705 1.82e-11 14_[+2(4.60e-09)]_25_[-1(6.17e-10)]_\ 21 chrIV:411216-411740 4.51e-01 100 chrIV:433962-434627 6.17e-13 28_[+1(3.39e-08)]_2_[+3(5.43e-08)]_\ 2_[-2(1.26e-07)]_7 chrIV:437477-438122 1.11e-13 21_[+2(3.23e-08)]_2_[-3(2.16e-08)]_\ 11_[-1(5.44e-08)]_5 chrIV:488486-489167 2.21e-10 29_[+1(2.67e-09)]_26_[-2(1.43e-08)]_\ 5 chrIV:489958-491698 8.02e-01 100 chrIV:519523-520092 3.22e-09 6_[-3(2.02e-09)]_12_[-1(2.49e-07)]_\ 40 chrIV:520343-521181 8.16e-01 100 chrIV:525065-525390 2.30e-01 100 chrIV:538881-539250 6.94e-01 100 chrIV:568681-569389 1.50e-04 20_[-1(4.52e-08)]_59 chrIV:578551-580851 7.52e-02 100 chrIV:619648-620395 6.90e-08 6_[+1(5.95e-08)]_2_[+3(3.27e-06)]_\ 50 chrIV:644852-645434 7.04e-06 68_[+1(1.14e-09)]_11 chrIV:667762-668243 2.55e-06 63_[+1(2.25e-10)]_16 chrIV:802546-803048 6.30e-05 37_[-2(8.66e-08)]_44 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chrXI:665439-666800 2.17e-01 100 chrXII:5-273 9.37e-01 100 chrXII:5455-5915 7.98e-01 100 chrXII:11022-12019 3.80e-01 100 chrXII:39512-40061 4.51e-01 100 chrXII:48636-49148 9.05e-01 100 chrXII:65235-65677 7.76e-01 100 chrXII:84081-84498 6.40e-01 100 chrXII:92279-92987 2.20e-05 37_[-1(5.80e-09)]_42 chrXII:167637-168242 1.97e-04 63_[+1(5.44e-08)]_16 chrXII:198677-199651 6.97e-02 100 chrXII:214663-215191 7.27e-12 14_[+1(1.08e-10)]_25_[-2(2.01e-08)]_\ 21 chrXII:232035-234226 3.54e-01 100 chrXII:241577-242754 3.10e-01 100 chrXII:262725-263918 7.36e-01 100 chrXII:282387-283856 2.83e-01 100 chrXII:346323-346602 9.80e-01 100 chrXII:366000-366739 8.95e-01 100 chrXII:369153-370287 7.16e-01 100 chrXII:370560-371306 2.28e-01 100 chrXII:374198-374727 7.47e-01 100 chrXII:424127-424511 6.69e-01 100 chrXII:426901-427696 4.65e-01 100 chrXII:448475-449018 1.88e-04 7_[-2(8.66e-08)]_74 chrXII:459600-460725 3.91e-01 100 chrXII:489285-489563 1.10e-03 43_[+2(6.84e-07)]_38 chrXII:497866-499722 4.36e-01 100 chrXII:522096-523518 4.56e-01 100 chrXII:588787-589301 8.40e-01 100 chrXII:592335-593233 6.52e-01 100 chrXII:605144-605665 5.80e-06 60_[-2(2.01e-08)]_21 chrXII:628132-629015 9.22e-01 100 chrXII:636410-640311 1.89e-01 100 chrXII:645834-646119 6.74e-02 100 chrXII:649462-651246 1.94e-01 100 chrXII:656652-657213 4.81e-06 60_[+1(6.17e-10)]_19 chrXII:673144-674396 7.29e-01 100 chrXII:687294-688164 1.61e-01 25_[-3(9.81e-05)]_54 chrXII:710353-711342 4.32e-01 100 chrXII:712310-713643 6.55e-01 100 chrXII:731858-732285 5.98e-05 67_[+2(1.43e-08)]_14 chrXII:734517-735021 8.23e-05 81_[+2(9.96e-09)] chrXII:780413-781898 3.94e-01 100 chrXII:784127-784729 1.33e-03 45_[-1(3.72e-07)]_34 chrXII:793711-796060 9.40e-01 100 chrXII:796281-797410 9.45e-01 100 chrXII:805392-807368 6.78e-01 100 chrXII:818474-819761 5.33e-01 100 chrXII:837619-839440 9.47e-01 100 chrXII:875238-875657 2.11e-05 44_[-1(3.97e-09)]_35 chrXII:897651-899638 4.12e-01 100 chrXII:903219-903682 5.15e-01 100 chrXII:921284-922647 2.38e-01 100 chrXII:924454-924913 8.45e-01 100 chrXII:931608-932517 2.77e-01 100 chrXII:962787-963322 2.72e-10 9_[+3(2.02e-09)]_3_[-2(2.52e-07)]_\ 48 chrXII:975700-976280 3.88e-09 51_[+1(1.38e-07)]_2_[+3(3.47e-09)]_\ 5 chrXII:1012099-1012386 1.59e-02 37_[+1(8.68e-06)]_42 chrXII:1017771-1019419 6.94e-01 100 chrXII:1028175-1028605 9.04e-01 100 chrXII:1051908-1052396 9.24e-05 24_[-2(9.96e-09)]_57 chrXII:1063998-1065370 4.12e-01 100 chrXIII:5337-5775 5.78e-01 100 chrXIII:23720-25573 8.99e-01 100 chrXIII:91609-92099 3.27e-01 100 chrXIII:123312-124722 9.94e-01 100 chrXIII:131267-132137 1.84e-01 100 chrXIII:145875-147544 2.68e-01 100 chrXIII:162929-164376 8.79e-01 100 chrXIII:168566-169098 1.80e-10 34_[-3(7.33e-09)]_16_[-1(3.73e-08)]_\ 8 chrXIII:183737-184198 1.62e-04 33_[-2(8.66e-08)]_48 chrXIII:195888-196418 6.63e-07 49_[-2(5.38e-10)]_32 chrXIII:223657-224713 6.34e-01 100 chrXIII:225323-226692 5.70e-02 100 chrXIII:258916-259523 2.41e-09 29_[+3(2.16e-08)]_2_[-2(2.77e-08)]_\ 29 chrXIII:267665-268757 5.20e-01 100 chrXIII:288329-290041 9.68e-01 100 chrXIII:290498-291141 2.06e-06 73_[-1(9.83e-10)]_6 chrXIII:296710-298920 4.86e-01 100 chrXIII:302823-303187 4.08e-02 100 chrXIII:320979-321621 4.13e-01 100 chrXIII:352088-352497 2.81e-07 36_[+2(1.07e-06)]_2_[-3(5.43e-08)]_\ 22 chrXIII:362854-363324 1.10e-06 23_[+2(2.41e-06)]_24_[-1(2.67e-07)]_\ 13 chrXIII:372145-372767 6.91e-06 47_[+1(2.67e-09)]_32 chrXIII:378706-379615 7.92e-01 100 chrXIII:420347-420926 1.71e-09 10_[+1(2.67e-09)]_26_[-2(7.59e-08)]_\ 24 chrXIII:433530-433794 3.59e-01 100 chrXIII:463292-463913 2.80e-05 43_[-1(4.52e-08)]_36 chrXIII:480387-480889 2.86e-12 41_[+1(3.77e-10)]_2_[+3(1.13e-09)]_\ 15 chrXIII:499050-500406 9.48e-01 100 chrXIII:500743-501736 7.45e-01 100 chrXIII:504606-505457 6.35e-01 100 chrXIII:550002-553193 9.85e-01 100 chrXIII:572666-573192 6.48e-10 12_[+1(7.76e-08)]_2_[+3(2.25e-06)]_\ 2_[-2(2.23e-06)]_23 chrXIII:586426-586897 1.42e-09 33_[+1(2.67e-09)]_26_[-2(6.63e-08)]_\ 1 chrXIII:650767-651224 4.79e-01 100 chrXIII:731786-733496 3.72e-01 100 chrXIII:747573-748212 1.22e-04 58_[+1(1.47e-08)]_21 chrXIII:752987-754907 5.08e-01 100 chrXIII:761301-762533 9.52e-01 100 chrXIII:768202-768658 3.01e-05 43_[-2(4.60e-09)]_38 chrXIII:797916-798153 6.10e-03 27_[-1(3.96e-05)]_52 chrXIII:807958-808565 1.29e-04 43_[+1(1.05e-08)]_36 chrXIII:837668-838264 1.80e-10 33_[-3(7.33e-09)]_16_[-1(3.73e-08)]_\ 9 chrXIII:861182-861437 3.51e-01 100 chrXIII:872696-872935 3.76e-01 100 chrXIII:892859-894984 8.43e-01 100 chrXIII:923144-924379 1.42e-01 100 chrXIV:6494-7166 1.80e-02 2_[-2(8.36e-06)]_79 chrXIV:62283-64849 1.08e-01 100 chrXIV:88921-90182 5.00e-02 6_[-2(3.45e-05)]_75 chrXIV:96017-96663 6.75e-04 4_[-2(8.66e-08)]_77 chrXIV:102484-103282 9.41e-01 100 chrXIV:104586-105207 3.96e-05 1_[-1(3.39e-08)]_78 chrXIV:241336-241785 6.72e-01 100 chrXIV:302291-302619 9.96e-01 100 chrXIV:330493-331180 4.77e-01 100 chrXIV:355493-355827 1.16e-02 47_[+2(7.61e-05)]_34 chrXIV:374701-375086 1.01e-07 24_[+2(7.50e-07)]_2_[-3(3.82e-08)]_\ 34 chrXIV:405684-406116 2.94e-02 7_[-2(4.76e-05)]_74 chrXIV:413505-416226 7.86e-01 100 chrXIV:434598-435091 4.13e-01 100 chrXIV:442788-443763 8.88e-01 100 chrXIV:443930-444170 9.77e-01 100 chrXIV:444419-444870 7.62e-01 100 chrXIV:493705-495623 2.43e-01 100 chrXIV:499279-500778 3.97e-01 100 chrXIV:546935-547390 3.45e-05 54_[-1(5.80e-09)]_25 chrXIV:560569-561023 2.55e-03 1_[-2(5.15e-07)]_80 chrXIV:567855-568477 4.74e-05 71_[-1(5.80e-09)]_8 chrXIV:569613-570142 1.87e-06 48_[+1(2.25e-10)]_31 chrXIV:575252-575895 9.25e-01 100 chrXIV:585487-586532 3.52e-01 100 chrXIV:602155-602565 1.68e-11 [+2(9.96e-09)]_26_[-1(2.25e-10)]_34 chrXIV:631689-632168 3.00e-04 21_[-2(6.23e-07)]_60 chrXIV:632372-632911 7.15e-13 6_[+2(5.67e-07)]_3_[-3(3.47e-09)]_2_\ [-1(1.38e-07)]_28 chrXIV:725287-726418 8.45e-01 100 chrXIV:783502-784329 6.05e-02 100 chrXV:1-1020 3.43e-01 100 chrXV:79754-80176 8.81e-01 100 chrXV:87520-88100 9.06e-01 100 chrXV:92107-94871 2.33e-01 100 chrXV:109464-110633 7.21e-01 100 chrXV:110845-111268 6.16e-05 9_[-2(1.26e-07)]_72 chrXV:113391-114148 5.39e-05 81_[+2(1.26e-07)] chrXV:159280-160705 2.99e-01 100 chrXV:161090-161447 8.19e-01 100 chrXV:167942-168462 1.66e-01 100 chrXV:216232-216697 7.31e-01 100 chrXV:226505-226935 9.11e-01 100 chrXV:227528-228615 6.88e-01 100 chrXV:253126-254707 7.22e-01 100 chrXV:274487-275012 2.56e-03 44_[-1(3.72e-07)]_35 chrXV:281675-282514 2.80e-02 10_[-2(5.68e-05)]_49_[+2(1.43e-05)]_\ 3 chrXV:287832-288455 9.70e-01 100 chrXV:300850-301657 7.38e-01 100 chrXV:340130-340849 9.65e-01 100 chrXV:353813-354331 5.50e-13 27_[+1(3.39e-08)]_2_[+3(5.43e-08)]_\ 2_[-2(1.12e-07)]_8 chrXV:431779-432150 3.77e-01 100 chrXV:438393-438979 5.88e-09 14_[+2(3.13e-05)]_39_[-1(3.97e-09)]_\ 7 chrXV:464218-464678 5.24e-07 50_[+2(5.38e-10)]_31 chrXV:487190-487707 8.88e-09 39_[+2(6.23e-07)]_3_[-3(3.47e-09)]_\ 18 chrXV:505096-505525 9.65e-01 100 chrXV:571562-572347 3.60e-01 100 chrXV:594033-594700 3.45e-07 46_[+1(8.91e-11)]_33 chrXV:639156-639441 6.35e-02 100 chrXV:663521-664453 5.33e-01 100 chrXV:677885-679231 9.61e-01 100 chrXV:709977-710518 1.06e-06 2_[+2(2.80e-07)]_29_[+1(2.63e-05)]_\ 29 chrXV:779661-780840 3.48e-01 100 chrXV:854005-854436 7.27e-12 25_[+1(1.08e-10)]_25_[-2(2.01e-08)]_\ 10 chrXV:866503-867146 3.82e-01 100 chrXV:882009-882559 6.59e-01 100 chrXV:900073-900430 1.24e-01 36_[+2(6.45e-05)]_45 chrXV:900583-901713 7.12e-01 100 chrXV:925127-925420 7.11e-02 100 chrXV:968108-968437 5.50e-01 100 chrXV:976183-976689 7.47e-10 33_[+2(2.60e-06)]_2_[-3(2.25e-06)]_\ 2_[-1(7.76e-08)]_2 chrXV:978765-979153 9.62e-01 100 chrXV:980453-981222 8.64e-01 100 chrXV:1003803-1004990 8.37e-01 100 chrXV:1025670-1026195 6.83e-01 100 chrXV:1027591-1029141 1.77e-01 100 chrXV:1091123-1091290 9.37e-01 100 chrXVI:55792-56524 2.47e-04 69_[+1(3.07e-08)]_10 chrXVI:75395-76715 8.71e-01 100 chrXVI:135227-135868 7.21e-01 100 chrXVI:172804-174147 9.46e-01 100 chrXVI:188523-188979 8.55e-02 100 chrXVI:209851-210582 3.42e-07 34_[+1(9.83e-10)]_45 chrXVI:279917-280235 6.50e-01 100 chrXVI:280709-282956 4.30e-01 100 chrXVI:302603-303282 5.12e-01 100 chrXVI:338562-339202 1.06e-06 19_[-1(2.63e-05)]_29_[-2(2.80e-07)]_\ 12 chrXVI:340554-340751 2.88e-01 100 chrXVI:378619-379240 6.15e-01 100 chrXVI:404518-406019 6.33e-01 100 chrXVI:406169-406859 2.50e-01 100 chrXVI:435616-436240 4.54e-13 23_[+1(4.21e-07)]_2_[+3(2.09e-07)]_\ 1_[-2(1.91e-09)]_13 chrXVI:515028-517054 1.85e-01 100 chrXVI:520091-520672 4.43e-01 100 chrXVI:560017-560520 1.48e-07 30_[+3(3.82e-08)]_2_[-2(1.07e-06)]_\ 28 chrXVI:572029-572560 2.92e-11 23_[+2(8.66e-08)]_23_[-1(4.85e-11)]_\ 14 chrXVI:581820-582364 3.91e-15 18_[+2(2.60e-06)]_2_[-3(1.13e-09)]_\ 2_[-1(3.77e-10)]_17 chrXVI:622322-622839 3.43e-06 18_[+1(3.96e-05)]_21_[+3(3.82e-08)]_\ 19 chrXVI:627348-627688 2.01e-02 76_[+2(1.00e-05)]_5 chrXVI:653625-654670 3.53e-01 100 chrXVI:689334-689880 7.01e-14 6_[+2(1.12e-07)]_2_[-3(8.36e-10)]_\ 11_[-1(2.49e-07)]_20 chrXVI:699890-700701 9.65e-01 100 chrXVI:731899-732317 8.59e-01 100 chrXVI:743761-744591 1.01e-02 1_[-2(8.94e-05)]_80 chrXVI:768881-769483 5.96e-01 100 chrXVI:775612-776195 5.76e-01 100 chrXVI:794451-796059 4.88e-01 100 chrXVI:810422-810919 7.21e-09 54_[+2(7.50e-07)]_3_[-3(3.47e-09)]_\ 3 chrXVI:819297-819875 1.30e-06 36_[-1(2.25e-10)]_43 chrXVI:856742-857120 1.57e-11 19_[+2(8.26e-09)]_25_[-1(6.17e-10)]_\ 16 chrXVI:860097-860655 1.08e-04 51_[+2(6.63e-08)]_30 chrXVI:866476-866854 4.65e-01 100 chrXVI:880117-880559 1.46e-11 16_[+1(2.25e-10)]_26_[-2(9.96e-09)]_\ 18 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************