******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--YRR1/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrI:3-1121 1.0000 100 chrI:71755-73596 1.0000 100 chrI:81868-82304 1.0000 100 chrI:138919-139376 1.0000 100 chrI:166033-166601 1.0000 100 chrI:180899-181470 1.0000 100 chrI:182348-183027 1.0000 100 chrI:229221-230193 1.0000 100 chrII:9362-9898 1.0000 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chrXV:487233-487700 1.0000 100 chrXV:505090-505513 1.0000 100 chrXV:571704-572169 1.0000 100 chrXV:594209-594668 1.0000 100 chrXV:639193-639444 1.0000 100 chrXV:641765-642625 1.0000 100 chrXV:663535-664291 1.0000 100 chrXV:677958-679212 1.0000 100 chrXV:709995-710448 1.0000 100 chrXV:759087-759515 1.0000 100 chrXV:779669-780942 1.0000 100 chrXV:832354-832733 1.0000 100 chrXV:854011-854455 1.0000 100 chrXV:866510-867923 1.0000 100 chrXV:901438-901687 1.0000 100 chrXV:925202-925411 1.0000 100 chrXV:968095-968458 1.0000 100 chrXV:976176-976704 1.0000 100 chrXV:978798-979152 1.0000 100 chrXV:980475-981047 1.0000 100 chrXV:1003941-1004969 1.0000 100 chrXV:1025701-1026082 1.0000 100 chrXV:1027888-1029305 1.0000 100 chrXVI:55845-56514 1.0000 100 chrXVI:75458-76743 1.0000 100 chrXVI:135513-135852 1.0000 100 chrXVI:172824-174102 1.0000 100 chrXVI:188534-188970 1.0000 100 chrXVI:209981-210483 1.0000 100 chrXVI:279947-280223 1.0000 100 chrXVI:280627-282964 1.0000 100 chrXVI:296959-298245 1.0000 100 chrXVI:302618-304280 1.0000 100 chrXVI:338720-339154 1.0000 100 chrXVI:378627-379013 1.0000 100 chrXVI:404566-405823 1.0000 100 chrXVI:406174-407778 1.0000 100 chrXVI:435630-436198 1.0000 100 chrXVI:520115-520551 1.0000 100 chrXVI:560000-560512 1.0000 100 chrXVI:572026-572631 1.0000 100 chrXVI:575196-575566 1.0000 100 chrXVI:581819-582324 1.0000 100 chrXVI:622312-622860 1.0000 100 chrXVI:645465-646269 1.0000 100 chrXVI:653826-655013 1.0000 100 chrXVI:689335-689885 1.0000 100 chrXVI:699894-700709 1.0000 100 chrXVI:701862-702303 1.0000 100 chrXVI:718449-719372 1.0000 100 chrXVI:731655-732498 1.0000 100 chrXVI:744038-744628 1.0000 100 chrXVI:768978-769512 1.0000 100 chrXVI:775632-776161 1.0000 100 chrXVI:794447-795831 1.0000 100 chrXVI:810453-810892 1.0000 100 chrXVI:819327-819887 1.0000 100 chrXVI:829915-830324 1.0000 100 chrXVI:856735-857164 1.0000 100 chrXVI:860133-860642 1.0000 100 chrXVI:866399-866757 1.0000 100 chrXVI:880037-880583 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--YRR1/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--YRR1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--YRR1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 580 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 58000 N= 580 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.294 C 0.206 G 0.206 T 0.294 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--YRR1/background): A 0.312 C 0.188 G 0.188 T 0.312 ******************************************************************************** ******************************************************************************** MOTIF CVBSGGTTCGATYCCSVK MEME-1 width = 18 sites = 141 llr = 2149 E-value = 5.0e-423 ******************************************************************************** -------------------------------------------------------------------------------- Motif CVBSGGTTCGATYCCSVK MEME-1 Description -------------------------------------------------------------------------------- Simplified A :3:12::::2a2::::3: pos.-specific C 8443::::a::24a7532 probability G :2358a:::8:2:::454 matrix T 2:31::aa:::46:21:3 bits 2.4 * * * 2.2 * * * 1.9 * * * 1.7 **** * * Relative 1.4 * ****** * Entropy 1.2 * ******* ** (22.0 bits) 1.0 * ******* *** 0.7 * ******** ***** 0.5 *********** ****** 0.2 *********** ****** 0.0 ------------------ Multilevel CCCGGGTTCGATTCCCGG consensus TATC A C TGCT sequence GG A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CVBSGGTTCGATYCCSVK MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------ chrXIV:631570-632151 - 44 1.86e-11 TGCGGGAGGT CCCGGGTTCGAGTCCCGG CTCGCCCCCA chrIII:123381-123831 - 29 1.86e-11 TGCGGGAGGT CCCGGGTTCGAGTCCCGG CTCGCCCCAC chrXVI:572026-572631 + 36 5.40e-11 ATCGTTGGGC CCCCGGTTCGATTCCGGG CTTGCGCAAT chrX:531573-532179 + 47 5.40e-11 ATCGTTGGGC CCCCGGTTCGATTCCGGG CTTGCGCAGT chrX:396511-397011 - 23 5.40e-11 ATCGTTGGGC CCCCGGTTCGATTCCGGG CTTGCGCATT chrVII:930732-931236 - 27 5.40e-11 ATCGTTGGGC CCCCGGTTCGATTCCGGG CTTGCGCATT chrVII:845386-845969 + 67 5.40e-11 ATCGTTGGGC CCCCGGTTCGATTCCGGG CTTGCGCAAT chrVI:180695-181273 - 48 5.40e-11 ATCGTTGGGC CCCCGGTTCGATTCCGGG CTTGCGCAGT chrIV:992596-993098 + 80 5.40e-11 ATCGTTGGGC CCCCGGTTCGATTCCGGG CTT chrIV:83320-83815 + 76 5.40e-11 ATCGTTGGGC CCCCGGTTCGATTCCGGG CTTGCGC chrXVI:209981-210483 - 18 1.77e-10 ACCGTGGAGA CCGGGGTTCGACTCCCCG TATCGGAGTT chrVII:541609-542173 + 55 1.77e-10 ACCGTGGAGA CCGGGGTTCGACTCCCCG TATCGGAGTG chrV:487111-487639 - 14 1.77e-10 ACCGTGGAGA CCGGGGTTCGACTCCCCG TATCGGAGTA chrV:176870-177417 + 52 1.77e-10 ACCGTGGAGA CCGGGGTTCGACTCCCCG TATCGGAGTA chrIX:370211-370657 + 79 1.77e-10 ACCGTGGAGA CCGGGGTTCGACTCCCCG TATC chrIV:1016961-1017526 - 22 1.77e-10 ACCGTGGAGA CCGGGGTTCGACTCCCCG CTTCGGAGTT chrII:644932-645437 + 79 1.77e-10 ACCGTGGAGA CCGGGGTTCGACTCCCCG TATC chrVIII:134050-134668 + 58 4.59e-10 ATCCGGACAA CCCCGGTTCGAATCCGGG TAGGACCTTT chrV:250100-250561 + 52 4.59e-10 ATCCGGACAA CCCCGGTTCGAATCCGGG TAGGACCTTT chrV:130825-131391 - 32 4.59e-10 ATCCGAACAA CCCCGGTTCGAATCCGGG TAAGACCTAT chrIV:802549-803025 - 2 4.59e-10 ATCCGGACAA CCCCGGTTCGAATCCGGG T chrIV:644985-645429 - 4 4.59e-10 ATCCGGACAA CCCCGGTTCGAATCCGGG TAG chrIV:520682-521416 + 19 4.59e-10 ATCCGGACAA CCCCGGTTCGAATCCGGG TAGGACCTTT chrII:350595-351112 + 70 4.59e-10 ATCCGGACAA CCCCGGTTCGAATCCGGG TAAGACCTTA chrXVI:768978-769512 - 20 2.08e-09 ACCGAAATGT CAGGGGTTCGAGCCCCCT ATGAGGAGTT chrXV:438426-439027 + 37 2.08e-09 ACCGAAATGT CAGGGGTTCGAGCCCCCT ATGAGGAGTT chrXI:578755-579321 + 47 2.08e-09 ACCGAAATGT CAGGGGTTCGAGCCCCCT ATGAGGAGTT chrXVI:880037-880583 - 44 3.41e-09 ACGCGGGGAT CAGCGGTTCGATCCCGCT AGAGACCATT chrXVI:819327-819887 + 20 3.41e-09 ACGCGGGGAT CAGCGGTTCGATCCCGCT AGAGACCATT chrXIV:569685-570158 - 4 3.41e-09 ACGCGGGGAT CAGCGGTTCGATCCCGCT AGA chrXII:734694-735007 + 50 3.41e-09 ACGCGGGGAT CAGCGGTTCGATCCCGCT AGAGACCATT chrV:551048-551581 - 29 3.41e-09 ACGCGGGGAT CAGCGGTTCGATCCCGCT AGAGACCAAT chrV:443002-443500 - 9 3.41e-09 ACGCGGGGAT CAGCGGTTCGATCCCGCT AGAGACCA chrIX:210486-211004 + 18 3.41e-09 ACGCGGGGAT CAGCGGTTCGATCCCGCT AGAGACCATA chrIV:667738-668265 - 64 3.41e-09 ACGCGGGGAT CAGCGGTTCGATCCCGCT AGAGACCATT chrII:197233-197882 + 35 3.41e-09 ACGCGGGGAT CAGCGGTTCGATCCCGCT AGAGACCATT chrVIII:475474-475911 - 72 3.99e-09 CGGCAAAGGT CCCGAGTTCGATCCTCGG TTGGAACATT chrVII:779383-779901 + 70 3.99e-09 AAGGTGGGGA CACGGGTTCGATTCTCGT ACCGCTCAAG chrIV:1075281-1075777 - 1 3.99e-09 CGGCAAAGGT CCCGAGTTCGATCCTCGG chrXV:854011-854455 - 12 5.43e-09 AGGAAGAGGT CATCGGTTCGATTCCGGT TGCGTCCAAT chrXII:214623-215176 - 42 5.43e-09 AGGAAGAGGT CATCGGTTCGATTCCGGT TGCGTCCATT chrV:311782-312297 - 42 5.43e-09 AGGAAGAGGT CATCGGTTCGATTCCGGT TGCGTCCAAT chrI:166033-166601 + 47 5.43e-09 AGGAAGAGGT CATCGGTTCGATTCCGGT TGCGTCCAAA chrX:538339-538855 + 54 6.32e-09 AGGAGAAGAC TGCGGGTTCGAGTCCCGT ACGGAACGTT chrXIII:586396-586929 - 32 1.12e-08 CGCAGAACGT CCCCAGTTCGATCCTGGG CGAAATCATT chrXIII:420320-420868 - 52 1.12e-08 CGCAGAACGT CCCCAGTTCGATCCTGGG CGAAATCATT chrXIII:372201-372732 - 37 1.12e-08 CGCAGAACGT CCCCAGTTCGATCCTGGG CGAAATCATT chrVIII:85106-85571 - 18 1.12e-08 CGCAGAACGT CCCCAGTTCGATCCTGGG CGAAATCAAT chrVII:412079-412599 - 13 1.12e-08 CGCAGAACGT CCCCAGTTCGATCCTGGG CGAAATCAAG chrV:438470-438968 + 79 1.12e-08 CGCAGAACGT CCCCAGTTCGATCCTGGG CGAA chrXV:980475-981047 + 51 1.29e-08 TGCGAGAGGC CCTGGGTTCAATTCCCAG CTCGCCCCTT chrXV:464229-464770 + 77 1.29e-08 TGCGAGAGGC CCTGGGTTCAATTCCCAG CTCGCC chrXV:300857-301446 + 72 1.29e-08 TGCGAGAGGC CCTGGGTTCAATTCCCAG CTCGCCCCCT chrXIV:567887-568480 + 59 1.29e-08 TGCGAGAGGC CCTGGGTTCAATTCCCAG CTCGCCCCTT chrXIV:546930-547409 + 52 1.29e-08 TGCGAGAGGC CCTGGGTTCAATTCCCAG CTCGCCCCGT chrVIII:388670-389228 - 2 1.29e-08 TGCGAGAGGC CCTGGGTTCAATTCCCAG C chrIV:488433-489181 - 48 1.29e-08 CGGCGAAGAT CCCGAGTTCGAACCTCGG TTGGATCAGA chrXIII:480393-480905 - 30 2.16e-08 ATCATAAGGT TAGGGGTTCGAGCCCCCT ACAGGGCTTC chrXI:202808-203285 + 50 2.16e-08 ATCATAAGGT TAGGGGTTCGAGCCCCCT ACAGGGCTTT chrX:414780-415285 + 31 2.16e-08 ATCATAAGGT TAGGGGTTCGAGCCCCCT ACAGGGCTAA chrVII:876148-876702 + 66 2.16e-08 ATCATAAGGT TAGGGGTTCGAGCCCCCT ACAGGGCTTT chrVII:185471-186045 - 14 2.16e-08 ATCATAAGGT TAGGGGTTCGAGCCCCCT ACAGGGCTAT chrVI:226524-226949 - 10 2.16e-08 ATCATAAGGT TAGGGGTTCGAGCCCCCT ACAGGGCTT chrV:435554-436039 - 14 2.16e-08 ATCATAAGGT TAGGGGTTCGAGCCCCCT ACAGGGCTTT chrV:135155-135709 - 51 2.16e-08 ATCATAAGGT TAGGGGTTCGAGCCCCCT ACAGGGCTTT chrIX:300021-300510 - 21 2.16e-08 ATCATAAGGT TAGGGGTTCGAGCCCCCT ACAGGGCTAT chrIV:1201510-1202065 + 60 2.16e-08 ATCATAAGGT TAGGGGTTCGAGCCCCCT ACAGGGCTAA chrXIII:463300-463874 + 63 2.76e-08 GCGTGCCAGA TCGGGGTTCAATTCCCCG TCGCGGAGAT chrXII:426887-427455 + 57 2.76e-08 GCGTGCCAGA TCGGGGTTCAATTCCCCG TCGCGGAGAA chrX:541300-541821 + 44 2.76e-08 GCGTGCCAGA TCGGGGTTCAATTCCCCG TCGCGGAGAT chrIX:336102-336644 - 34 2.76e-08 GCGTGCCAGA TCGGGGTTCAATTCCCCG TCGCGGAGAT chrXIV:725884-726414 - 43 4.39e-08 CGGTTGTCCG CGCGAGTTCGAACCTCGC ATCCTTCAGT chrXI:46567-47017 - 1 4.39e-08 ATGCGGGGAT CGTGGGTTCAATTCCCAC chrIV:519537-520155 + 5 4.39e-08 TCCG CGCGAGTTCGAACCTCGC ATCCTTCAAT chrII:347408-347923 + 46 4.39e-08 CGGTTGTCCG CGCGAGTTCGAACCTCGC ATCCTTCAGT chrII:9362-9898 + 61 4.39e-08 CGGTTGTCCG CGCGAGTTCGAACCTCGC ATCCTTCAGT chrXIII:747730-748152 - 9 5.50e-08 ATCAGAAGAT TATGGGTTCGACCCCCAT CGTGAGTG chrXIII:131558-132129 - 40 5.50e-08 ATCAGAAGAT TATGGGTTCGACCCCCAT CGTGAGTGCT chrXI:162269-162777 - 22 5.50e-08 ATCAGAAGAT TATGGGTTCGACCCCCAT CGTGAGTGTT chrX:374195-374875 - 29 5.50e-08 ATCAGAAGAT TATGGGTTCGACCCCCAT CGTGAGTGCT chrX:355132-355758 + 25 5.50e-08 ATCAGAAGAT TATGGGTTCGACCCCCAT CGTGAGTGCT chrVII:828432-829008 - 61 5.50e-08 ATCAGAAGAT TATGGGTTCGACCCCCAT CGTGAGTGCT chrVII:736167-736645 + 30 5.50e-08 ATCAGAAGAT TATGGGTTCGACCCCCAT CGTGAGTGTT chrVII:405267-405756 + 55 5.50e-08 ATCAGAAGAT TATGGGTTCGACCCCCAT CGTGAGTGCT chrIV:568672-569249 + 18 5.50e-08 ATCAGAAGAT TATGGGTTCGACCCCCAT CGTGAGTGCT chrII:405602-406268 + 39 5.50e-08 ATCAGAAGAT TATGGGTTCGACCCCCAT CGTGAGTGCT chrVIII:132812-133350 - 3 8.42e-08 GCTTTGCCCG CGCAGGTTCGAGTCCTGC AG chrVII:561399-561950 - 46 8.42e-08 GCTTTGCCCG CGCAGGTTCGAGTCCTGC AGTTGTCGTT chrIV:980734-981270 - 30 8.42e-08 GCTTTGCCCG CGCAGGTTCGAGTCCTGC AGTTGTCGTT chrIV:437534-438056 + 83 8.42e-08 GCTTTGCCCG CGCAGGTTCGAGTCCTGC chrII:226849-227387 + 63 8.42e-08 GCTTTGCCCG CGCAGGTTCGAGTCCTGC AGTTGTCGTT chrXVI:856735-857164 + 50 1.03e-07 TGGGAGAGGT CTCCGGTTCGATTCCGGA CTCGTCCATT chrXIII:768170-768664 - 10 1.03e-07 TGGGAGAGGT CTCCGGTTCGATTCCGGA CTCGTCCAA chrXIII:320947-321336 - 64 1.03e-07 TGGGAGAGGT CTCCGGTTCGATTCCGGA CTCGTCCATT chrXII:656716-657210 - 29 1.03e-07 TGGGAGAGGT CTCCGGTTCGATTCCGGA CTCGTCCAAG chrVII:774118-774642 + 66 1.03e-07 TGGGAGAGGT CTCCGGTTCGATTCCGGA CTCGTCCAAA chrVI:204760-205201 - 2 1.03e-07 TGGGAGAGGT CTCCGGTTCGATTCCGGA C chrIV:410154-410685 + 57 1.03e-07 TGGGAGAGGT CTCCGGTTCGATTCCGGA CTCGTCCAAA chrXV:274469-275011 + 58 1.26e-07 GTTTTACCTG CGCAGGTTCGAATCCTGT CTGTGACGCA chrXII:784136-784681 + 70 1.26e-07 GTTTTACCTG CGCAGGTTCGAATCCTGT CTGTGACGCT chrVI:191284-191816 - 21 1.26e-07 GTTTTACCTG CGCAGGTTCGAATCCTGT CTGTGACGCA chrIV:1150455-1151190 - 78 1.26e-07 ACCTG CGCAGGTTCGAATCCTGT CTGTGACGCA chrXV:353872-354325 - 1 2.60e-07 ATGTGGAGAT CATCGGTTCAAATCCGAT chrXIV:104575-105132 + 49 2.60e-07 ATGTGGAGAT CATCGGTTCAAATCCGAT TGGAAGCATA chrXIII:362847-363313 + 80 2.60e-07 GCCGATGAAA CCCTGGTTCGATTCTAGG AGA chrXI:313163-313698 - 29 2.60e-07 GCCGATGAAA CCCTGGTTCGATTCTAGG AGATGGCATT chrVII:319580-320140 + 17 2.60e-07 GCCGATGAAA CCCTGGTTCGATTCTAGG AGATGGCATT chrVII:110406-110917 - 22 2.60e-07 GCCGATGAAA CCCTGGTTCGATTCTAGG AGATGGCAAT chrV:207116-207649 + 71 2.60e-07 GCCGATGAAA CCCTGGTTCGATTCTAGG AGATGGCATA chrIX:325512-326057 + 61 2.60e-07 ATGTGGAGAT CATCGGTTCAAATCCGAT TGGAAGCAAT chrIV:434007-434585 - 26 2.60e-07 ATGTGGAGAT CATCGGTTCAAATCCGAT TGGAAGCATA chrII:266144-266661 + 73 2.60e-07 ATGTGGAGAT CATCGGTTCAAATCCGAT TGGAAGCATT chrXVI:435630-436198 - 37 4.59e-07 ATCTGTTGGT CCTTAGTTCGATCCTGAG TGCGAGCTTT chrVII:706912-707357 - 32 4.59e-07 ATCTGTTGGT CCTTAGTTCGATCCTGAG TGCGAGCTTT chrXVI:689335-689885 + 61 5.76e-07 GCTCTGCCCG CGCTGGTTCAAATCCTGC TGGTGTCGTA chrXII:374186-374638 + 40 5.76e-07 ACCAGAAGAT TCCAGGTTCAAGTCCTGG CGGGGAAGAT chrV:492194-492584 - 21 5.76e-07 ACCAGAAGAT TCCAGGTTCAAGTCCTGG CGGGGAAGGA chrV:288142-288770 - 45 5.76e-07 GCTCTGCCCG CGCTGGTTCAAATCCTGC TGGTGTCGTT chrIV:619686-620245 - 62 5.76e-07 ACCAGAAGAT TCCAGGTTCAAGTCCTGG CGGGGAAGAT chrXV:487233-487700 + 71 6.19e-07 ATCGCAAGAT CGTGAGTTCAACCCTCAC TGGGGTCGTT chrXV:228085-228621 + 76 6.19e-07 ATCGCAAGAT CGTGAGTTCAACCCTCAC TGGGGTC chrXIV:632391-632888 + 58 6.19e-07 ATCGCAAGAT CGTGAGTTCAACCCTCAC TGGGGTCGTT chrXII:975788-976267 - 14 6.19e-07 ATCGCAAGAT CGTGAGTTCAACCCTCAC TGGGGTCGTT chrXI:74382-74939 + 62 6.19e-07 ATCGCAAGAT CGTGAGTTCAACCCTCAC TGGGGTCGCT chrVII:730928-731415 + 64 6.19e-07 ATCGCAAGAT CGTGAGTTCAACCCTCAC TGGGGTCGTT chrVI:137217-137813 - 29 6.19e-07 ATCGCAAGAT CGTGAGTTCAACCCTCAC TGGGGTCGTT chrXVI:55845-56514 - 48 8.77e-07 ATCGAAGGGT TGCAGGTTCAATTCCTGT CCGTTTCAAT chrXIII:837710-838297 + 38 8.77e-07 ATCTTGAGAT CGGGCGTTCGACTCGCCC CCGGGAGATA chrXI:302678-303253 + 83 8.77e-07 ATCGAAGGGT TGCAGGTTCAATTCCTGT chrX:354013-354539 + 81 8.77e-07 ATCTTGAGAT CGGGCGTTCGACTCGCCC CC chrVI:167234-167711 + 78 8.77e-07 ATCTTGAGAT CGGGCGTTCGACTCGCCC CCGGG chrIV:946119-946617 + 57 8.77e-07 ATCTTGAGAT CGGGCGTTCGACTCGCCC CCGGGAGATT chrVIII:466763-467302 + 54 9.38e-07 ATGCAAAGGT CGCTAGTTCAATTCTGGC AGGTGGCATT chrXV:976176-976704 + 78 1.00e-06 ATCTGAAGGT CGAGAGTTCGAACCTCCC CTGGA chrX:422653-423294 + 61 1.00e-06 ATCTGAAGGT CGAGAGTTCGAACCTCCC CTGGAGCACA chrX:390829-391318 - 28 1.00e-06 ATCTGAAGGT CGAGAGTTCGAACCTCCC CTGGAGCATA chrXVI:622312-622860 - 12 1.07e-06 ATCTGGAGGT CCTGTGTTCGATCCACAG AATTCGCATT chrVIII:358263-358797 - 6 1.07e-06 ATCTGGAGGT CCTGTGTTCGATCCACAG AATTC chrVI:157694-158251 - 2 1.07e-06 ATCTGGAGGT CCTGTGTTCGATCCACAG A chrIV:1095026-1095672 - 79 1.07e-06 AGGT CCTGTGTTCGATCCACAG AGTTCGCATT chrXVI:744038-744628 + 47 2.76e-06 ATGCAAAGGT CGTTAGTTCAATTCTGAC AGGTGGCAAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CVBSGGTTCGATYCCSVK MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:631570-632151 1.9e-11 43_[-1]_39 chrIII:123381-123831 1.9e-11 28_[-1]_54 chrXVI:572026-572631 5.4e-11 35_[+1]_47 chrX:531573-532179 5.4e-11 46_[+1]_36 chrX:396511-397011 5.4e-11 22_[-1]_60 chrVII:930732-931236 5.4e-11 26_[-1]_56 chrVII:845386-845969 5.4e-11 66_[+1]_16 chrVI:180695-181273 5.4e-11 47_[-1]_35 chrIV:992596-993098 5.4e-11 79_[+1]_3 chrIV:83320-83815 5.4e-11 75_[+1]_7 chrXVI:209981-210483 1.8e-10 17_[-1]_65 chrVII:541609-542173 1.8e-10 54_[+1]_28 chrV:487111-487639 1.8e-10 13_[-1]_69 chrV:176870-177417 1.8e-10 51_[+1]_31 chrIX:370211-370657 1.8e-10 78_[+1]_4 chrIV:1016961-1017526 1.8e-10 21_[-1]_61 chrII:644932-645437 1.8e-10 78_[+1]_4 chrVIII:134050-134668 4.6e-10 57_[+1]_25 chrV:250100-250561 4.6e-10 51_[+1]_31 chrV:130825-131391 4.6e-10 31_[-1]_51 chrIV:802549-803025 4.6e-10 1_[-1]_81 chrIV:644985-645429 4.6e-10 3_[-1]_79 chrIV:520682-521416 4.6e-10 18_[+1]_64 chrII:350595-351112 4.6e-10 69_[+1]_13 chrXVI:768978-769512 2.1e-09 19_[-1]_63 chrXV:438426-439027 2.1e-09 36_[+1]_46 chrXI:578755-579321 2.1e-09 46_[+1]_36 chrXVI:880037-880583 3.4e-09 43_[-1]_39 chrXVI:819327-819887 3.4e-09 19_[+1]_63 chrXIV:569685-570158 3.4e-09 3_[-1]_79 chrXII:734694-735007 3.4e-09 49_[+1]_33 chrV:551048-551581 3.4e-09 28_[-1]_54 chrV:443002-443500 3.4e-09 8_[-1]_74 chrIX:210486-211004 3.4e-09 17_[+1]_65 chrIV:667738-668265 3.4e-09 63_[-1]_19 chrII:197233-197882 3.4e-09 34_[+1]_48 chrVIII:475474-475911 4e-09 71_[-1]_11 chrVII:779383-779901 4e-09 69_[+1]_13 chrIV:1075281-1075777 4e-09 [-1]_82 chrXV:854011-854455 5.4e-09 11_[-1]_71 chrXII:214623-215176 5.4e-09 41_[-1]_41 chrV:311782-312297 5.4e-09 41_[-1]_41 chrI:166033-166601 5.4e-09 46_[+1]_36 chrX:538339-538855 6.3e-09 53_[+1]_29 chrXIII:586396-586929 1.1e-08 31_[-1]_51 chrXIII:420320-420868 1.1e-08 51_[-1]_31 chrXIII:372201-372732 1.1e-08 36_[-1]_46 chrVIII:85106-85571 1.1e-08 17_[-1]_65 chrVII:412079-412599 1.1e-08 12_[-1]_70 chrV:438470-438968 1.1e-08 78_[+1]_4 chrXV:980475-981047 1.3e-08 50_[+1]_32 chrXV:464229-464770 1.3e-08 76_[+1]_6 chrXV:300857-301446 1.3e-08 71_[+1]_11 chrXIV:567887-568480 1.3e-08 58_[+1]_24 chrXIV:546930-547409 1.3e-08 51_[+1]_31 chrVIII:388670-389228 1.3e-08 1_[-1]_81 chrIV:488433-489181 1.3e-08 47_[-1]_35 chrXIII:480393-480905 2.2e-08 29_[-1]_53 chrXI:202808-203285 2.2e-08 49_[+1]_33 chrX:414780-415285 2.2e-08 30_[+1]_52 chrVII:876148-876702 2.2e-08 65_[+1]_17 chrVII:185471-186045 2.2e-08 13_[-1]_69 chrVI:226524-226949 2.2e-08 9_[-1]_73 chrV:435554-436039 2.2e-08 13_[-1]_69 chrV:135155-135709 2.2e-08 50_[-1]_32 chrIX:300021-300510 2.2e-08 20_[-1]_62 chrIV:1201510-1202065 2.2e-08 59_[+1]_23 chrXIII:463300-463874 2.8e-08 62_[+1]_20 chrXII:426887-427455 2.8e-08 56_[+1]_26 chrX:541300-541821 2.8e-08 43_[+1]_39 chrIX:336102-336644 2.8e-08 33_[-1]_49 chrXIV:725884-726414 4.4e-08 42_[-1]_40 chrXI:46567-47017 4.4e-08 [-1]_82 chrIV:519537-520155 4.4e-08 4_[+1]_78 chrII:347408-347923 4.4e-08 45_[+1]_37 chrII:9362-9898 4.4e-08 60_[+1]_22 chrXIII:747730-748152 5.5e-08 8_[-1]_74 chrXIII:131558-132129 5.5e-08 39_[-1]_43 chrXI:162269-162777 5.5e-08 21_[-1]_61 chrX:374195-374875 5.5e-08 28_[-1]_54 chrX:355132-355758 5.5e-08 24_[+1]_58 chrVII:828432-829008 5.5e-08 60_[-1]_22 chrVII:736167-736645 5.5e-08 29_[+1]_53 chrVII:405267-405756 5.5e-08 54_[+1]_28 chrIV:568672-569249 5.5e-08 17_[+1]_65 chrII:405602-406268 5.5e-08 38_[+1]_44 chrVIII:132812-133350 8.4e-08 2_[-1]_80 chrVII:561399-561950 8.4e-08 45_[-1]_37 chrIV:980734-981270 8.4e-08 29_[-1]_53 chrIV:437534-438056 8.4e-08 82_[+1] chrII:226849-227387 8.4e-08 62_[+1]_20 chrXVI:856735-857164 1e-07 49_[+1]_33 chrXIII:768170-768664 1e-07 9_[-1]_73 chrXIII:320947-321336 1e-07 63_[-1]_19 chrXII:656716-657210 1e-07 28_[-1]_54 chrVII:774118-774642 1e-07 65_[+1]_17 chrVI:204760-205201 1e-07 1_[-1]_81 chrIV:410154-410685 1e-07 56_[+1]_26 chrXV:274469-275011 1.3e-07 57_[+1]_25 chrXII:784136-784681 1.3e-07 69_[+1]_13 chrVI:191284-191816 1.3e-07 20_[-1]_62 chrIV:1150455-1151190 1.3e-07 77_[-1]_5 chrXV:353872-354325 2.6e-07 [-1]_82 chrXIV:104575-105132 2.6e-07 48_[+1]_34 chrXIII:362847-363313 2.6e-07 79_[+1]_3 chrXI:313163-313698 2.6e-07 28_[-1]_54 chrVII:319580-320140 2.6e-07 16_[+1]_66 chrVII:110406-110917 2.6e-07 21_[-1]_61 chrV:207116-207649 2.6e-07 70_[+1]_12 chrIX:325512-326057 2.6e-07 60_[+1]_22 chrIV:434007-434585 2.6e-07 25_[-1]_57 chrII:266144-266661 2.6e-07 72_[+1]_10 chrXVI:435630-436198 4.6e-07 36_[-1]_46 chrVII:706912-707357 4.6e-07 31_[-1]_51 chrXVI:689335-689885 5.8e-07 60_[+1]_22 chrXII:374186-374638 5.8e-07 39_[+1]_43 chrV:492194-492584 5.8e-07 20_[-1]_62 chrV:288142-288770 5.8e-07 44_[-1]_38 chrIV:619686-620245 5.8e-07 61_[-1]_21 chrXV:487233-487700 6.2e-07 70_[+1]_12 chrXV:228085-228621 6.2e-07 75_[+1]_7 chrXIV:632391-632888 6.2e-07 57_[+1]_25 chrXII:975788-976267 6.2e-07 13_[-1]_69 chrXI:74382-74939 6.2e-07 61_[+1]_21 chrVII:730928-731415 6.2e-07 63_[+1]_19 chrVI:137217-137813 6.2e-07 28_[-1]_54 chrXVI:55845-56514 8.8e-07 47_[-1]_35 chrXIII:837710-838297 8.8e-07 37_[+1]_45 chrXI:302678-303253 8.8e-07 82_[+1] chrX:354013-354539 8.8e-07 80_[+1]_2 chrVI:167234-167711 8.8e-07 77_[+1]_5 chrIV:946119-946617 8.8e-07 56_[+1]_26 chrVIII:466763-467302 9.4e-07 53_[+1]_29 chrXV:976176-976704 1e-06 77_[+1]_5 chrX:422653-423294 1e-06 60_[+1]_22 chrX:390829-391318 1e-06 27_[-1]_55 chrXVI:622312-622860 1.1e-06 11_[-1]_71 chrVIII:358263-358797 1.1e-06 5_[-1]_77 chrVI:157694-158251 1.1e-06 1_[-1]_81 chrIV:1095026-1095672 1.1e-06 78_[-1]_4 chrXVI:744038-744628 2.8e-06 46_[+1]_36 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CVBSGGTTCGATYCCSVK MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CVBSGGTTCGATYCCSVK width=18 seqs=141 chrXIV:631570-632151 ( 44) CCCGGGTTCGAGTCCCGG 1 chrIII:123381-123831 ( 29) CCCGGGTTCGAGTCCCGG 1 chrXVI:572026-572631 ( 36) CCCCGGTTCGATTCCGGG 1 chrX:531573-532179 ( 47) CCCCGGTTCGATTCCGGG 1 chrX:396511-397011 ( 23) CCCCGGTTCGATTCCGGG 1 chrVII:930732-931236 ( 27) CCCCGGTTCGATTCCGGG 1 chrVII:845386-845969 ( 67) CCCCGGTTCGATTCCGGG 1 chrVI:180695-181273 ( 48) CCCCGGTTCGATTCCGGG 1 chrIV:992596-993098 ( 80) CCCCGGTTCGATTCCGGG 1 chrIV:83320-83815 ( 76) CCCCGGTTCGATTCCGGG 1 chrXVI:209981-210483 ( 18) CCGGGGTTCGACTCCCCG 1 chrVII:541609-542173 ( 55) CCGGGGTTCGACTCCCCG 1 chrV:487111-487639 ( 14) CCGGGGTTCGACTCCCCG 1 chrV:176870-177417 ( 52) CCGGGGTTCGACTCCCCG 1 chrIX:370211-370657 ( 79) CCGGGGTTCGACTCCCCG 1 chrIV:1016961-1017526 ( 22) CCGGGGTTCGACTCCCCG 1 chrII:644932-645437 ( 79) CCGGGGTTCGACTCCCCG 1 chrVIII:134050-134668 ( 58) CCCCGGTTCGAATCCGGG 1 chrV:250100-250561 ( 52) CCCCGGTTCGAATCCGGG 1 chrV:130825-131391 ( 32) CCCCGGTTCGAATCCGGG 1 chrIV:802549-803025 ( 2) CCCCGGTTCGAATCCGGG 1 chrIV:644985-645429 ( 4) CCCCGGTTCGAATCCGGG 1 chrIV:520682-521416 ( 19) CCCCGGTTCGAATCCGGG 1 chrII:350595-351112 ( 70) CCCCGGTTCGAATCCGGG 1 chrXVI:768978-769512 ( 20) CAGGGGTTCGAGCCCCCT 1 chrXV:438426-439027 ( 37) CAGGGGTTCGAGCCCCCT 1 chrXI:578755-579321 ( 47) CAGGGGTTCGAGCCCCCT 1 chrXVI:880037-880583 ( 44) CAGCGGTTCGATCCCGCT 1 chrXVI:819327-819887 ( 20) CAGCGGTTCGATCCCGCT 1 chrXIV:569685-570158 ( 4) CAGCGGTTCGATCCCGCT 1 chrXII:734694-735007 ( 50) CAGCGGTTCGATCCCGCT 1 chrV:551048-551581 ( 29) CAGCGGTTCGATCCCGCT 1 chrV:443002-443500 ( 9) CAGCGGTTCGATCCCGCT 1 chrIX:210486-211004 ( 18) CAGCGGTTCGATCCCGCT 1 chrIV:667738-668265 ( 64) CAGCGGTTCGATCCCGCT 1 chrII:197233-197882 ( 35) CAGCGGTTCGATCCCGCT 1 chrVIII:475474-475911 ( 72) CCCGAGTTCGATCCTCGG 1 chrVII:779383-779901 ( 70) CACGGGTTCGATTCTCGT 1 chrIV:1075281-1075777 ( 1) CCCGAGTTCGATCCTCGG 1 chrXV:854011-854455 ( 12) CATCGGTTCGATTCCGGT 1 chrXII:214623-215176 ( 42) CATCGGTTCGATTCCGGT 1 chrV:311782-312297 ( 42) CATCGGTTCGATTCCGGT 1 chrI:166033-166601 ( 47) CATCGGTTCGATTCCGGT 1 chrX:538339-538855 ( 54) TGCGGGTTCGAGTCCCGT 1 chrXIII:586396-586929 ( 32) CCCCAGTTCGATCCTGGG 1 chrXIII:420320-420868 ( 52) CCCCAGTTCGATCCTGGG 1 chrXIII:372201-372732 ( 37) CCCCAGTTCGATCCTGGG 1 chrVIII:85106-85571 ( 18) CCCCAGTTCGATCCTGGG 1 chrVII:412079-412599 ( 13) CCCCAGTTCGATCCTGGG 1 chrV:438470-438968 ( 79) CCCCAGTTCGATCCTGGG 1 chrXV:980475-981047 ( 51) CCTGGGTTCAATTCCCAG 1 chrXV:464229-464770 ( 77) CCTGGGTTCAATTCCCAG 1 chrXV:300857-301446 ( 72) CCTGGGTTCAATTCCCAG 1 chrXIV:567887-568480 ( 59) CCTGGGTTCAATTCCCAG 1 chrXIV:546930-547409 ( 52) CCTGGGTTCAATTCCCAG 1 chrVIII:388670-389228 ( 2) CCTGGGTTCAATTCCCAG 1 chrIV:488433-489181 ( 48) CCCGAGTTCGAACCTCGG 1 chrXIII:480393-480905 ( 30) TAGGGGTTCGAGCCCCCT 1 chrXI:202808-203285 ( 50) TAGGGGTTCGAGCCCCCT 1 chrX:414780-415285 ( 31) TAGGGGTTCGAGCCCCCT 1 chrVII:876148-876702 ( 66) TAGGGGTTCGAGCCCCCT 1 chrVII:185471-186045 ( 14) TAGGGGTTCGAGCCCCCT 1 chrVI:226524-226949 ( 10) TAGGGGTTCGAGCCCCCT 1 chrV:435554-436039 ( 14) TAGGGGTTCGAGCCCCCT 1 chrV:135155-135709 ( 51) TAGGGGTTCGAGCCCCCT 1 chrIX:300021-300510 ( 21) TAGGGGTTCGAGCCCCCT 1 chrIV:1201510-1202065 ( 60) TAGGGGTTCGAGCCCCCT 1 chrXIII:463300-463874 ( 63) TCGGGGTTCAATTCCCCG 1 chrXII:426887-427455 ( 57) TCGGGGTTCAATTCCCCG 1 chrX:541300-541821 ( 44) TCGGGGTTCAATTCCCCG 1 chrIX:336102-336644 ( 34) TCGGGGTTCAATTCCCCG 1 chrXIV:725884-726414 ( 43) CGCGAGTTCGAACCTCGC 1 chrXI:46567-47017 ( 1) CGTGGGTTCAATTCCCAC 1 chrIV:519537-520155 ( 5) CGCGAGTTCGAACCTCGC 1 chrII:347408-347923 ( 46) CGCGAGTTCGAACCTCGC 1 chrII:9362-9898 ( 61) CGCGAGTTCGAACCTCGC 1 chrXIII:747730-748152 ( 9) TATGGGTTCGACCCCCAT 1 chrXIII:131558-132129 ( 40) TATGGGTTCGACCCCCAT 1 chrXI:162269-162777 ( 22) TATGGGTTCGACCCCCAT 1 chrX:374195-374875 ( 29) TATGGGTTCGACCCCCAT 1 chrX:355132-355758 ( 25) TATGGGTTCGACCCCCAT 1 chrVII:828432-829008 ( 61) TATGGGTTCGACCCCCAT 1 chrVII:736167-736645 ( 30) TATGGGTTCGACCCCCAT 1 chrVII:405267-405756 ( 55) TATGGGTTCGACCCCCAT 1 chrIV:568672-569249 ( 18) TATGGGTTCGACCCCCAT 1 chrII:405602-406268 ( 39) TATGGGTTCGACCCCCAT 1 chrVIII:132812-133350 ( 3) CGCAGGTTCGAGTCCTGC 1 chrVII:561399-561950 ( 46) CGCAGGTTCGAGTCCTGC 1 chrIV:980734-981270 ( 30) CGCAGGTTCGAGTCCTGC 1 chrIV:437534-438056 ( 83) CGCAGGTTCGAGTCCTGC 1 chrII:226849-227387 ( 63) CGCAGGTTCGAGTCCTGC 1 chrXVI:856735-857164 ( 50) CTCCGGTTCGATTCCGGA 1 chrXIII:768170-768664 ( 10) CTCCGGTTCGATTCCGGA 1 chrXIII:320947-321336 ( 64) CTCCGGTTCGATTCCGGA 1 chrXII:656716-657210 ( 29) CTCCGGTTCGATTCCGGA 1 chrVII:774118-774642 ( 66) CTCCGGTTCGATTCCGGA 1 chrVI:204760-205201 ( 2) CTCCGGTTCGATTCCGGA 1 chrIV:410154-410685 ( 57) CTCCGGTTCGATTCCGGA 1 chrXV:274469-275011 ( 58) CGCAGGTTCGAATCCTGT 1 chrXII:784136-784681 ( 70) CGCAGGTTCGAATCCTGT 1 chrVI:191284-191816 ( 21) CGCAGGTTCGAATCCTGT 1 chrIV:1150455-1151190 ( 78) CGCAGGTTCGAATCCTGT 1 chrXV:353872-354325 ( 1) CATCGGTTCAAATCCGAT 1 chrXIV:104575-105132 ( 49) CATCGGTTCAAATCCGAT 1 chrXIII:362847-363313 ( 80) CCCTGGTTCGATTCTAGG 1 chrXI:313163-313698 ( 29) CCCTGGTTCGATTCTAGG 1 chrVII:319580-320140 ( 17) CCCTGGTTCGATTCTAGG 1 chrVII:110406-110917 ( 22) CCCTGGTTCGATTCTAGG 1 chrV:207116-207649 ( 71) CCCTGGTTCGATTCTAGG 1 chrIX:325512-326057 ( 61) CATCGGTTCAAATCCGAT 1 chrIV:434007-434585 ( 26) CATCGGTTCAAATCCGAT 1 chrII:266144-266661 ( 73) CATCGGTTCAAATCCGAT 1 chrXVI:435630-436198 ( 37) CCTTAGTTCGATCCTGAG 1 chrVII:706912-707357 ( 32) CCTTAGTTCGATCCTGAG 1 chrXVI:689335-689885 ( 61) CGCTGGTTCAAATCCTGC 1 chrXII:374186-374638 ( 40) TCCAGGTTCAAGTCCTGG 1 chrV:492194-492584 ( 21) TCCAGGTTCAAGTCCTGG 1 chrV:288142-288770 ( 45) CGCTGGTTCAAATCCTGC 1 chrIV:619686-620245 ( 62) TCCAGGTTCAAGTCCTGG 1 chrXV:487233-487700 ( 71) CGTGAGTTCAACCCTCAC 1 chrXV:228085-228621 ( 76) CGTGAGTTCAACCCTCAC 1 chrXIV:632391-632888 ( 58) CGTGAGTTCAACCCTCAC 1 chrXII:975788-976267 ( 14) CGTGAGTTCAACCCTCAC 1 chrXI:74382-74939 ( 62) CGTGAGTTCAACCCTCAC 1 chrVII:730928-731415 ( 64) CGTGAGTTCAACCCTCAC 1 chrVI:137217-137813 ( 29) CGTGAGTTCAACCCTCAC 1 chrXVI:55845-56514 ( 48) TGCAGGTTCAATTCCTGT 1 chrXIII:837710-838297 ( 38) CGGGCGTTCGACTCGCCC 1 chrXI:302678-303253 ( 83) TGCAGGTTCAATTCCTGT 1 chrX:354013-354539 ( 81) CGGGCGTTCGACTCGCCC 1 chrVI:167234-167711 ( 78) CGGGCGTTCGACTCGCCC 1 chrIV:946119-946617 ( 57) CGGGCGTTCGACTCGCCC 1 chrVIII:466763-467302 ( 54) CGCTAGTTCAATTCTGGC 1 chrXV:976176-976704 ( 78) CGAGAGTTCGAACCTCCC 1 chrX:422653-423294 ( 61) CGAGAGTTCGAACCTCCC 1 chrX:390829-391318 ( 28) CGAGAGTTCGAACCTCCC 1 chrXVI:622312-622860 ( 12) CCTGTGTTCGATCCACAG 1 chrVIII:358263-358797 ( 6) CCTGTGTTCGATCCACAG 1 chrVI:157694-158251 ( 2) CCTGTGTTCGATCCACAG 1 chrIV:1095026-1095672 ( 79) CCTGTGTTCGATCCACAG 1 chrXVI:744038-744628 ( 47) CGTTAGTTCAATTCTGAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CVBSGGTTCGATYCCSVK MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 18 n= 48140 bayes= 9.8038 E= 5.0e-423 -1378 206 -1378 -55 -7 110 40 -265 -387 120 48 -14 -165 79 140 -200 -70 -273 200 -346 -1378 -1378 241 -1378 -1378 -1378 -1378 168 -1378 -1378 -1378 168 -1378 241 -1378 -1378 -46 -1378 204 -1378 168 -1378 -1378 -1378 -76 8 -15 52 -1378 120 -1378 86 -1378 241 -1378 -1378 -346 191 -273 -41 -314 140 91 -146 -29 59 129 -1378 -265 8 110 16 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CVBSGGTTCGATYCCSVK MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 18 nsites= 141 E= 5.0e-423 0.000000 0.787234 0.000000 0.212766 0.297872 0.404255 0.248227 0.049645 0.021277 0.432624 0.262411 0.283688 0.099291 0.326241 0.496454 0.078014 0.191489 0.028369 0.751773 0.028369 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.226950 0.000000 0.773050 0.000000 1.000000 0.000000 0.000000 0.000000 0.184397 0.198582 0.170213 0.446809 0.000000 0.432624 0.000000 0.567376 0.000000 1.000000 0.000000 0.000000 0.028369 0.709220 0.028369 0.234043 0.035461 0.496454 0.354610 0.113475 0.255319 0.283688 0.460993 0.000000 0.049645 0.198582 0.404255 0.347518 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CVBSGGTTCGATYCCSVK MEME-1 regular expression -------------------------------------------------------------------------------- [CT][CAG][CTG][GC]GGTTC[GA]AT[TC]C[CT][CG][GCA][GT] -------------------------------------------------------------------------------- Time 325.96 secs. ******************************************************************************** ******************************************************************************** MOTIF GGCBMRKTKGKTARSGCGYCHGAYTMDWA MEME-2 width = 29 sites = 112 llr = 2034 E-value = 2.7e-431 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGCBMRKTKGKTARSGCGYCHGAYTMDWA MEME-2 Description -------------------------------------------------------------------------------- Simplified A 2::1462:::::a52::2123:6::4438 pos.-specific C :3933:112:11::3:a:462227:212: probability G 861314415951:46a:811172::2312 matrix T 11:21:373148:1::::5241:3a225: bits 2.4 * 2.2 ** 1.9 * * ** 1.7 * * * ** * Relative 1.4 * * * ** * Entropy 1.2 *** * * *** * ** (26.2 bits) 1.0 *** * * **** * ** * 0.7 *** * * **** **** * ** * 0.5 *** * ************* **** * 0.2 ******************** **** ** 0.0 ----------------------------- Multilevel GGCCAAGTGGGTAAGGCGTCTGACTAATA consensus C GCGT T T GC C A T CGA sequence T A C T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCBMRKTKGKTARSGCGYCHGAYTMDWA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrXV:353872-354325 - 29 9.69e-14 CTGCTTCTAT GGCCAAGTTGGTAAGGCGCCACACTAGTA ATGTGGAGAT chrXIV:560504-561043 - 6 9.69e-14 GGGCTTCTAT GGCCAAGTTGGTAAGGCGCCACACTAGTA ATGTG chrXIV:104575-105132 + 10 9.69e-14 AGCTTCTAT GGCCAAGTTGGTAAGGCGCCACACTAGTA ATGTGGAGAT chrVIII:115936-116418 - 16 9.69e-14 GAGCTTCTAT GGCCAAGTTGGTAAGGCGCCACACTAGTA ATGTGGAGAT chrIX:325512-326057 + 22 9.69e-14 GAGCTTCTAT GGCCAAGTTGGTAAGGCGCCACACTAGTA ATGTGGAGAT chrIX:174805-175256 + 59 9.69e-14 GAGCTTCTAT GGCCAAGTTGGTAAGGCGCCACACTAGTA ATGTGGAGAT chrIV:434007-434585 - 54 9.69e-14 AAGCTTCTAT GGCCAAGTTGGTAAGGCGCCACACTAGTA ATGTGGAGAT chrII:266144-266661 + 34 9.69e-14 CTGCTTCTAT GGCCAAGTTGGTAAGGCGCCACACTAGTA ATGTGGAGAT chrXVI:689335-689885 + 13 4.95e-12 TGGGCACTAT GGCCGAGTGGTTAAGGCGACAGACTTGAA ATCTGTTGGG chrXVI:581819-582324 + 49 9.63e-12 GAGCCTTGTT GGCGCAATCGGTAGCGCGTATGACTCTTA ATCATAAGGT chrXIII:480393-480905 - 58 9.63e-12 TAGCCTTGTT GGCGCAATCGGTAGCGCGTATGACTCTTA ATCATAAGGT chrXI:202808-203285 + 11 9.63e-12 AAGCCTTGTT GGCGCAATCGGTAGCGCGTATGACTCTTA ATCATAAGGT chrVII:876148-876702 + 27 9.63e-12 TAGCCTTGTT GGCGCAATCGGTAGCGCGTATGACTCTTA ATCATAAGGT chrVII:185471-186045 - 42 9.63e-12 TAGCCTTGTT GGCGCAATCGGTAGCGCGTATGACTCTTA ATCATAAGGT chrVII:122013-122549 + 46 9.63e-12 TAGCCTTGTT GGCGCAATCGGTAGCGCGTATGACTCTTA ATCATAAGGT chrVI:226524-226949 - 38 9.63e-12 ATGCCTTGTT GGCGCAATCGGTAGCGCGTATGACTCTTA ATCATAAGGT chrV:435554-436039 - 42 9.63e-12 GAGCCTTGTT GGCGCAATCGGTAGCGCGTATGACTCTTA ATCATAAGGT chrIX:300021-300510 - 49 9.63e-12 TAGCCTTGTT GGCGCAATCGGTAGCGCGTATGACTCTTA ATCATAAGGT chrIV:1352323-1352749 - 16 9.63e-12 TAGCCTTGTT GGCGCAATCGGTAGCGCGTATGACTCTTA ATCATAAGGT chrIV:1201510-1202065 + 21 9.63e-12 TAGCCTTGTT GGCGCAATCGGTAGCGCGTATGACTCTTA ATCATAAGGT chrIII:227736-228218 + 23 2.12e-11 ATGGCACTAT GGCCGAGTGGTTAAGGCGAGAGACTCGAA TGGAATAAAA chrXV:854011-854455 - 40 3.85e-11 CAGGGCACAT GGCGCAGTTGGTAGCGCGCTTCCCTTGCA AGGAAGAGGT chrXII:214623-215176 - 70 3.85e-11 AT GGCGCAGTTGGTAGCGCGCTTCCCTTGCA AGGAAGAGGT chrV:311782-312297 - 70 3.85e-11 AT GGCGCAGTTGGTAGCGCGCTTCCCTTGCA AGGAAGAGGT chrI:166033-166601 + 8 3.85e-11 GGCACAT GGCGCAGTTGGTAGCGCGCTTCCCTTGCA AGGAAGAGGT chrXVI:810453-810892 + 63 6.83e-11 CGACTCCATG GCCAAGTTGGTTAAGGCGTGCGACTGTTA ATCGCAAGA chrXV:487233-487700 + 32 6.83e-11 AGACTCCATG GCCAAGTTGGTTAAGGCGTGCGACTGTTA ATCGCAAGAT chrXV:228085-228621 + 37 6.83e-11 AGACTCCATG GCCAAGTTGGTTAAGGCGTGCGACTGTTA ATCGCAAGAT chrXIV:632391-632888 + 19 6.83e-11 TGACTCCATG GCCAAGTTGGTTAAGGCGTGCGACTGTTA ATCGCAAGAT chrXIV:102485-102969 + 48 6.83e-11 AGACTCCATG GCCAAGTTGGTTAAGGCGTGCGACTGTTA ATCGCAAGAT chrXII:975788-976267 - 42 6.83e-11 AGACTCCATG GCCAAGTTGGTTAAGGCGTGCGACTGTTA ATCGCAAGAT chrXI:74382-74939 + 23 6.83e-11 AGACTCCATG GCCAAGTTGGTTAAGGCGTGCGACTGTTA ATCGCAAGAT chrVII:730928-731415 + 25 6.83e-11 AGACTCCATG GCCAAGTTGGTTAAGGCGTGCGACTGTTA ATCGCAAGAT chrVI:137217-137813 - 57 6.83e-11 TGACTCCATG GCCAAGTTGGTTAAGGCGTGCGACTGTTA ATCGCAAGAT chrIII:127512-127906 + 66 6.83e-11 TGACTCCATG GCCAAGTTGGTTAAGGCGTGCGACTGTTA ATCGCA chrXII:167748-168296 - 17 1.03e-10 ATGGCAACTT GGCCGAGTGGTTAAGGCGAAAGATTAGAA ATCTTTTGGG chrX:523842-524328 - 22 1.03e-10 AAGGCAACTT GGCCGAGTGGTTAAGGCGAAAGATTAGAA ATCTTTTGGG chrVIII:132812-133350 - 40 1.03e-10 GTGGCAACTT GGCCGAGTGGTTAAGGCGAAAGATTAGAA ATCTTTTGGG chrIV:1305384-1305895 + 49 1.03e-10 AAGGCAACTT GGCCGAGTGGTTAAGGCGAAAGATTAGAA ATCTTTTGGG chrIV:980734-981270 - 67 1.03e-10 AACTT GGCCGAGTGGTTAAGGCGAAAGATTAGAA ATCTTTTGGG chrIV:437534-438056 + 35 1.03e-10 AAGGCAACTT GGCCGAGTGGTTAAGGCGAAAGATTAGAA ATCTTTTGGG chrII:226849-227387 + 15 1.03e-10 GAGGCAACTT GGCCGAGTGGTTAAGGCGAAAGATTAGAA ATCTTTTGGG chrXVI:880037-880583 - 72 2.94e-10 . GCCCAGTTGGTTAAGGCACCGTGCTAATA ACGCGGGGAT chrXIV:602090-602553 + 50 2.94e-10 TGGTCTCTTG GCCCAGTTGGTTAAGGCACCGTGCTAATA ACGCGGGGAT chrXIV:569685-570158 - 32 2.94e-10 TGGTCTCTTG GCCCAGTTGGTTAAGGCACCGTGCTAATA ACGCGGGGAT chrXII:1051890-1052380 - 22 2.94e-10 TGGTCTCTTG GCCCAGTTGGTTAAGGCACCGTGCTAATA ACGCGGGGAT chrXII:734694-735007 + 11 2.94e-10 TGGTCTCTTG GCCCAGTTGGTTAAGGCACCGTGCTAATA ACGCGGGGAT chrVII:738776-739449 + 69 2.94e-10 AGGTCTCTTG GCCCAGTTGGTTAAGGCACCGTGCTAATA ACG chrV:551048-551581 - 57 2.94e-10 AGGTCTCTTG GCCCAGTTGGTTAAGGCACCGTGCTAATA ACGCGGGGAT chrV:443002-443500 - 37 2.94e-10 TGGTCTCTTG GCCCAGTTGGTTAAGGCACCGTGCTAATA ACGCGGGGAT chrIX:183288-183728 - 18 2.94e-10 TGGTCTCTTG GCCCAGTTGGTTAAGGCACCGTGCTAATA ACGCGGGGAT chrXVI:856735-857164 + 11 7.77e-10 TCGGGCGTGT GGCGTAGTCGGTAGCGCGCTCCCTTAGCA TGGGAGAGGT chrXV:340118-340608 - 22 7.77e-10 TGTTCCTCGT GGCCCAATGGTCACGGCGTCTGGCTACGA ACCAGAAGAT chrXIII:768170-768664 - 38 7.77e-10 ATGGGCGTGT GGCGTAGTCGGTAGCGCGCTCCCTTAGCA TGGGAGAGGT chrXII:656716-657210 - 57 7.77e-10 TTGGGCGTGT GGCGTAGTCGGTAGCGCGCTCCCTTAGCA TGGGAGAGGT chrXII:374186-374638 + 1 7.77e-10 . GGCCCAATGGTCACGGCGTCTGGCTACGA ACCAGAAGAT chrXI:490709-491241 + 51 7.77e-10 TGTTCCTCGT GGCCCAATGGTCACGGCGTCTGGCTACGA ACCAGAAGAT chrX:197157-197619 - 11 7.77e-10 TAGGGCGTGT GGCGTAGTCGGTAGCGCGCTCCCTTAGCA TGGGAGAGGT chrVII:774118-774642 + 27 7.77e-10 TTGGGCGTGT GGCGTAGTCGGTAGCGCGCTCCCTTAGCA TGGGAGAGGT chrVI:204760-205201 - 30 7.77e-10 TCGGGCGTGT GGCGTAGTCGGTAGCGCGCTCCCTTAGCA TGGGAGAGGT chrV:492194-492584 - 49 7.77e-10 TATTCCTCGT GGCCCAATGGTCACGGCGTCTGGCTACGA ACCAGAAGAT chrIV:410154-410685 + 18 7.77e-10 TTGGGCGTGT GGCGTAGTCGGTAGCGCGCTCCCTTAGCA TGGGAGAGGT chrXVI:768978-769512 - 71 1.38e-09 T AGCTCAGTTGGTAGAGCGTTCGGCTTTTA AGCGCATTTG chrXII:875190-875627 + 26 1.38e-09 CATCCTTGTT AGCTCAGTTGGTAGAGCGTTCGGCTTTTA AGCGCATTTG chrVII:115239-115769 + 42 1.38e-09 CATCCTTGTT AGCTCAGTTGGTAGAGCGTTCGGCTTTTA AGCGCATTTG chrIV:359357-359836 + 39 1.38e-09 CATCCTTGTT AGCTCAGTTGGTAGAGCGTTCGGCTTTTA AGCGCATTTG chrXVI:622312-622860 - 59 2.14e-09 ATGCGGATTT AGCTCAGTTGGGAGAGCGCCAGACTGAAG AAAAAACTTC chrXVI:560000-560512 - 47 2.14e-09 GAGCGGATTT AGCTCAGTTGGGAGAGCGCCAGACTGAAG AAAAAACTTC chrXIV:374667-375115 + 36 2.14e-09 AAGCGGACTT AGCTCAGTTGGGAGAGCGCCAGACTGAAG AAAAACTTCG chrXIII:352075-352524 + 39 2.14e-09 AAGCGGATTT AGCTCAGTTGGGAGAGCGCCAGACTGAAG AAATACTTCG chrVIII:358263-358797 - 53 2.14e-09 AAGCGGATTT AGCTCAGTTGGGAGAGCGCCAGACTGAAG AAAAAACTTC chrVIII:237714-238145 - 24 2.14e-09 AAGCGGATTT AGCTCAGTTGGGAGAGCGCCAGACTGAAG AAAAAACTTC chrVI:157694-158251 - 49 2.14e-09 AAGCGGATTT AGCTCAGTTGGGAGAGCGCCAGACTGAAG AAAAAACTTC chrXII:731894-732269 + 68 5.44e-09 TGGGAGTTTG GCCGAGTGGTTTAAGGCGTCAGATTTAGG TGGA chrX:617755-618184 + 9 5.44e-09 GGAGTTTG GCCGAGTGGTTTAAGGCGTCAGATTTAGG TGGATTTAAC chrXIII:504663-505218 + 14 8.07e-09 TGGTTGTTTG GCCGAGCGGTCTAAGGCGCCTGATTCAAG AAATATCTTG chrXII:628133-628656 + 48 8.07e-09 TGGTTGTTTG GCCGAGCGGTCTAAGGCGCCTGATTCAAG AAAATATCTT chrVII:857205-857671 - 66 8.07e-09 TGTTTG GCCGAGCGGTCTAAGGCGCCTGATTCAAG AAATATCTTG chrVII:422882-423401 + 10 8.07e-09 GGTTGTTTG GCCGAGCGGTCTAAGGCGCCTGATTCAAG AAATATCTTG chrVII:205286-205808 + 33 8.07e-09 TGGTTGTTTG GCCGAGCGGTCTAAGGCGCCTGATTCAAG CAATATCTTG chrIV:1461505-1462066 - 57 8.07e-09 TGGTTGTTTG GCCGAGCGGTCTAAGGCGCCTGATTCAAG AAAAAATCTT chrI:180899-181470 + 16 8.07e-09 TGGTTGTTTG GCCGAGCGGTCTAAGGCGCCTGATTCAAG AAATATCTTG chrXI:83954-84446 + 67 1.30e-08 TGGAGGGTTG GCCGAGTGGTCTAAGGCGGCAGACTTAAG ATCTG chrX:424290-424751 - 8 1.30e-08 TGGAGGGTTG GCCGAGTGGTCTAAGGCGGCAGACTTAAG ATCTGTT chrII:9362-9898 + 12 1.30e-08 TGGAGGGTTG GCCGAGTGGTCTAAGGCGGCAGACTTAAG ATCTGTTGGA chrXIII:586396-586929 - 60 1.56e-08 TGGTTTCGTG GTCTAGTCGGTTATGGCATCTGCTTAACA CGCAGAACGT chrXIII:372201-372732 - 65 1.56e-08 TTTCGTG GTCTAGTCGGTTATGGCATCTGCTTAACA CGCAGAACGT chrXII:687662-688174 - 27 1.56e-08 AGGTTTCGTG GTCTAGTCGGTTATGGCATCTGCTTAACA CGCAGAACGT chrXI:379459-379922 + 49 1.56e-08 AGGTTTCGTG GTCTAGTCGGTTATGGCATCTGCTTAACA CGCAGAACGT chrXI:307967-308457 - 18 1.56e-08 TGGTTTCGTG GTCTAGTCGGTTATGGCATCTGCTTAACA CGCAGAACGT chrVIII:85106-85571 - 46 1.56e-08 TGGTTTCGTG GTCTAGTCGGTTATGGCATCTGCTTAACA CGCAGAACGT chrVII:823263-823716 + 52 1.56e-08 TGGTTTCGTG GTCTAGTCGGTTATGGCATCTGCTTAACA CGCAGAACGT chrVII:412079-412599 - 41 1.56e-08 TGGTTTCGTG GTCTAGTCGGTTATGGCATCTGCTTAACA CGCAGAACGT chrV:469233-469696 + 52 1.56e-08 TGGTTTCGTG GTCTAGTCGGTTATGGCATCTGCTTAACA CGCAGAACGT chrV:438470-438968 + 40 1.56e-08 AGGTTTCGTG GTCTAGTCGGTTATGGCATCTGCTTAACA CGCAGAACGT chrXI:46567-47017 - 29 3.46e-08 TCAGCCCTTT TGGCCAAGTGGTAAGGCATCGCACTCGTA ATGCGGGGAT chrXII:605124-605645 - 62 4.46e-08 ATGCTCGTGT AGCTCAGTGGTTAGAGCTTCGTGCTTATA GCAACATTCG chrIV:884169-884654 + 8 4.46e-08 CTCGTGT AGCTCAGTGGTTAGAGCTTCGTGCTTATA GCAACATTCG chrXV:976176-976704 + 39 7.27e-08 GCGCTTCAGT AGCTCAGTAGGAAGAGCGTCAGTCTCATA ATCTGAAGGT chrX:422653-423294 + 22 7.27e-08 ATGCTTCAGT AGCTCAGTAGGAAGAGCGTCAGTCTCATA ATCTGAAGGT chrX:390829-391318 - 56 7.27e-08 GTGCTTCAGT AGCTCAGTAGGAAGAGCGTCAGTCTCATA ATCTGAAGGT chrIV:1175584-1176085 + 53 7.27e-08 AAGCTTCAGT AGCTCAGTAGGAAGAGCGTCAGTCTCATA ATCTGAAGGT chrX:538339-538855 + 15 7.46e-07 TTGGTTCCGT TGGCGTAATGGTAACGCGTCTCCCTCCTA AGGAGAAGAC chrXIII:131558-132129 - 68 1.14e-06 CGCG TGGCGTAATGGCAACGCGTCTGACTTCTA ATCAGAAGAT chrXI:162269-162777 - 50 1.14e-06 TTAGCTCGCG TGGCGTAATGGCAACGCGTCTGACTTCTA ATCAGAAGAT chrX:374195-374875 - 57 1.14e-06 GTAGCTCGCG TGGCGTAATGGCAACGCGTCTGACTTCTA ATCAGAAGAT chrVII:405267-405756 + 16 1.14e-06 GTAGCTCGCG TGGCGTAATGGCAACGCGTCTGACTTCTA ATCAGAAGAT chrXIII:302825-303243 - 32 2.66e-06 TTATTTCCGC GGCGCGGTTGTGAACGTGGGAGGTTCCCC GGAAAACATC chrXVI:435630-436198 - 65 2.81e-06 GCTCGTA TGGCGCAGTGGTAGCGCAGCAGATTGCAA ATCTGTTGGT chrVII:706912-707357 - 60 2.81e-06 CAAGCTCGTA TGGCGCAGTGGTAGCGCAGCAGATTGCAA ATCTGTTGGT chrV:130825-131391 - 59 2.74e-05 GAGGTTTTAT AGTGTAGTGGTTATCACTTTCGGTTTTGA TCCGAACAAC chrII:350595-351112 + 32 2.74e-05 AGGGTTTTAT AGTGTAGTGGTTATCACTTTCGGTTTTGA TCCGGACAAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCBMRKTKGKTARSGCGYCHGAYTMDWA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXV:353872-354325 9.7e-14 28_[-2]_43 chrXIV:560504-561043 9.7e-14 5_[-2]_66 chrXIV:104575-105132 9.7e-14 9_[+2]_62 chrVIII:115936-116418 9.7e-14 15_[-2]_56 chrIX:325512-326057 9.7e-14 21_[+2]_50 chrIX:174805-175256 9.7e-14 58_[+2]_13 chrIV:434007-434585 9.7e-14 53_[-2]_18 chrII:266144-266661 9.7e-14 33_[+2]_38 chrXVI:689335-689885 5e-12 12_[+2]_59 chrXVI:581819-582324 9.6e-12 48_[+2]_23 chrXIII:480393-480905 9.6e-12 57_[-2]_14 chrXI:202808-203285 9.6e-12 10_[+2]_61 chrVII:876148-876702 9.6e-12 26_[+2]_45 chrVII:185471-186045 9.6e-12 41_[-2]_30 chrVII:122013-122549 9.6e-12 45_[+2]_26 chrVI:226524-226949 9.6e-12 37_[-2]_34 chrV:435554-436039 9.6e-12 41_[-2]_30 chrIX:300021-300510 9.6e-12 48_[-2]_23 chrIV:1352323-1352749 9.6e-12 15_[-2]_56 chrIV:1201510-1202065 9.6e-12 20_[+2]_51 chrIII:227736-228218 2.1e-11 22_[+2]_49 chrXV:854011-854455 3.8e-11 39_[-2]_32 chrXII:214623-215176 3.8e-11 69_[-2]_2 chrV:311782-312297 3.8e-11 69_[-2]_2 chrI:166033-166601 3.8e-11 7_[+2]_64 chrXVI:810453-810892 6.8e-11 62_[+2]_9 chrXV:487233-487700 6.8e-11 31_[+2]_40 chrXV:228085-228621 6.8e-11 36_[+2]_35 chrXIV:632391-632888 6.8e-11 18_[+2]_53 chrXIV:102485-102969 6.8e-11 47_[+2]_24 chrXII:975788-976267 6.8e-11 41_[-2]_30 chrXI:74382-74939 6.8e-11 22_[+2]_49 chrVII:730928-731415 6.8e-11 24_[+2]_47 chrVI:137217-137813 6.8e-11 56_[-2]_15 chrIII:127512-127906 6.8e-11 65_[+2]_6 chrXII:167748-168296 1e-10 16_[-2]_55 chrX:523842-524328 1e-10 21_[-2]_50 chrVIII:132812-133350 1e-10 39_[-2]_32 chrIV:1305384-1305895 1e-10 48_[+2]_23 chrIV:980734-981270 1e-10 66_[-2]_5 chrIV:437534-438056 1e-10 34_[+2]_37 chrII:226849-227387 1e-10 14_[+2]_57 chrXVI:880037-880583 2.9e-10 71_[-2] chrXIV:602090-602553 2.9e-10 49_[+2]_22 chrXIV:569685-570158 2.9e-10 31_[-2]_40 chrXII:1051890-1052380 2.9e-10 21_[-2]_50 chrXII:734694-735007 2.9e-10 10_[+2]_61 chrVII:738776-739449 2.9e-10 68_[+2]_3 chrV:551048-551581 2.9e-10 56_[-2]_15 chrV:443002-443500 2.9e-10 36_[-2]_35 chrIX:183288-183728 2.9e-10 17_[-2]_54 chrXVI:856735-857164 7.8e-10 10_[+2]_61 chrXV:340118-340608 7.8e-10 21_[-2]_50 chrXIII:768170-768664 7.8e-10 37_[-2]_34 chrXII:656716-657210 7.8e-10 56_[-2]_15 chrXII:374186-374638 7.8e-10 [+2]_71 chrXI:490709-491241 7.8e-10 50_[+2]_21 chrX:197157-197619 7.8e-10 10_[-2]_61 chrVII:774118-774642 7.8e-10 26_[+2]_45 chrVI:204760-205201 7.8e-10 29_[-2]_42 chrV:492194-492584 7.8e-10 48_[-2]_23 chrIV:410154-410685 7.8e-10 17_[+2]_54 chrXVI:768978-769512 1.4e-09 70_[-2]_1 chrXII:875190-875627 1.4e-09 25_[+2]_46 chrVII:115239-115769 1.4e-09 41_[+2]_30 chrIV:359357-359836 1.4e-09 38_[+2]_33 chrXVI:622312-622860 2.1e-09 58_[-2]_13 chrXVI:560000-560512 2.1e-09 46_[-2]_25 chrXIV:374667-375115 2.1e-09 35_[+2]_36 chrXIII:352075-352524 2.1e-09 38_[+2]_33 chrVIII:358263-358797 2.1e-09 52_[-2]_19 chrVIII:237714-238145 2.1e-09 23_[-2]_48 chrVI:157694-158251 2.1e-09 48_[-2]_23 chrXII:731894-732269 5.4e-09 67_[+2]_4 chrX:617755-618184 5.4e-09 8_[+2]_63 chrXIII:504663-505218 8.1e-09 13_[+2]_58 chrXII:628133-628656 8.1e-09 47_[+2]_24 chrVII:857205-857671 8.1e-09 65_[-2]_6 chrVII:422882-423401 8.1e-09 9_[+2]_62 chrVII:205286-205808 8.1e-09 32_[+2]_39 chrIV:1461505-1462066 8.1e-09 56_[-2]_15 chrI:180899-181470 8.1e-09 15_[+2]_56 chrXI:83954-84446 1.3e-08 66_[+2]_5 chrX:424290-424751 1.3e-08 7_[-2]_64 chrII:9362-9898 1.3e-08 11_[+2]_60 chrXIII:586396-586929 1.6e-08 59_[-2]_12 chrXIII:372201-372732 1.6e-08 64_[-2]_7 chrXII:687662-688174 1.6e-08 26_[-2]_45 chrXI:379459-379922 1.6e-08 48_[+2]_23 chrXI:307967-308457 1.6e-08 17_[-2]_54 chrVIII:85106-85571 1.6e-08 45_[-2]_26 chrVII:823263-823716 1.6e-08 51_[+2]_20 chrVII:412079-412599 1.6e-08 40_[-2]_31 chrV:469233-469696 1.6e-08 51_[+2]_20 chrV:438470-438968 1.6e-08 39_[+2]_32 chrXI:46567-47017 3.5e-08 28_[-2]_43 chrXII:605124-605645 4.5e-08 61_[-2]_10 chrIV:884169-884654 4.5e-08 7_[+2]_64 chrXV:976176-976704 7.3e-08 38_[+2]_33 chrX:422653-423294 7.3e-08 21_[+2]_50 chrX:390829-391318 7.3e-08 55_[-2]_16 chrIV:1175584-1176085 7.3e-08 52_[+2]_19 chrX:538339-538855 7.5e-07 14_[+2]_57 chrXIII:131558-132129 1.1e-06 67_[-2]_4 chrXI:162269-162777 1.1e-06 49_[-2]_22 chrX:374195-374875 1.1e-06 56_[-2]_15 chrVII:405267-405756 1.1e-06 15_[+2]_56 chrXIII:302825-303243 2.7e-06 31_[-2]_40 chrXVI:435630-436198 2.8e-06 64_[-2]_7 chrVII:706912-707357 2.8e-06 59_[-2]_12 chrV:130825-131391 2.7e-05 58_[-2]_13 chrII:350595-351112 2.7e-05 31_[+2]_40 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCBMRKTKGKTARSGCGYCHGAYTMDWA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGCBMRKTKGKTARSGCGYCHGAYTMDWA width=29 seqs=112 chrXV:353872-354325 ( 29) GGCCAAGTTGGTAAGGCGCCACACTAGTA 1 chrXIV:560504-561043 ( 6) GGCCAAGTTGGTAAGGCGCCACACTAGTA 1 chrXIV:104575-105132 ( 10) GGCCAAGTTGGTAAGGCGCCACACTAGTA 1 chrVIII:115936-116418 ( 16) GGCCAAGTTGGTAAGGCGCCACACTAGTA 1 chrIX:325512-326057 ( 22) GGCCAAGTTGGTAAGGCGCCACACTAGTA 1 chrIX:174805-175256 ( 59) GGCCAAGTTGGTAAGGCGCCACACTAGTA 1 chrIV:434007-434585 ( 54) GGCCAAGTTGGTAAGGCGCCACACTAGTA 1 chrII:266144-266661 ( 34) GGCCAAGTTGGTAAGGCGCCACACTAGTA 1 chrXVI:689335-689885 ( 13) GGCCGAGTGGTTAAGGCGACAGACTTGAA 1 chrXVI:581819-582324 ( 49) GGCGCAATCGGTAGCGCGTATGACTCTTA 1 chrXIII:480393-480905 ( 58) GGCGCAATCGGTAGCGCGTATGACTCTTA 1 chrXI:202808-203285 ( 11) GGCGCAATCGGTAGCGCGTATGACTCTTA 1 chrVII:876148-876702 ( 27) GGCGCAATCGGTAGCGCGTATGACTCTTA 1 chrVII:185471-186045 ( 42) GGCGCAATCGGTAGCGCGTATGACTCTTA 1 chrVII:122013-122549 ( 46) GGCGCAATCGGTAGCGCGTATGACTCTTA 1 chrVI:226524-226949 ( 38) GGCGCAATCGGTAGCGCGTATGACTCTTA 1 chrV:435554-436039 ( 42) GGCGCAATCGGTAGCGCGTATGACTCTTA 1 chrIX:300021-300510 ( 49) GGCGCAATCGGTAGCGCGTATGACTCTTA 1 chrIV:1352323-1352749 ( 16) GGCGCAATCGGTAGCGCGTATGACTCTTA 1 chrIV:1201510-1202065 ( 21) GGCGCAATCGGTAGCGCGTATGACTCTTA 1 chrIII:227736-228218 ( 23) GGCCGAGTGGTTAAGGCGAGAGACTCGAA 1 chrXV:854011-854455 ( 40) GGCGCAGTTGGTAGCGCGCTTCCCTTGCA 1 chrXII:214623-215176 ( 70) GGCGCAGTTGGTAGCGCGCTTCCCTTGCA 1 chrV:311782-312297 ( 70) GGCGCAGTTGGTAGCGCGCTTCCCTTGCA 1 chrI:166033-166601 ( 8) GGCGCAGTTGGTAGCGCGCTTCCCTTGCA 1 chrXVI:810453-810892 ( 63) GCCAAGTTGGTTAAGGCGTGCGACTGTTA 1 chrXV:487233-487700 ( 32) GCCAAGTTGGTTAAGGCGTGCGACTGTTA 1 chrXV:228085-228621 ( 37) GCCAAGTTGGTTAAGGCGTGCGACTGTTA 1 chrXIV:632391-632888 ( 19) GCCAAGTTGGTTAAGGCGTGCGACTGTTA 1 chrXIV:102485-102969 ( 48) GCCAAGTTGGTTAAGGCGTGCGACTGTTA 1 chrXII:975788-976267 ( 42) GCCAAGTTGGTTAAGGCGTGCGACTGTTA 1 chrXI:74382-74939 ( 23) GCCAAGTTGGTTAAGGCGTGCGACTGTTA 1 chrVII:730928-731415 ( 25) GCCAAGTTGGTTAAGGCGTGCGACTGTTA 1 chrVI:137217-137813 ( 57) GCCAAGTTGGTTAAGGCGTGCGACTGTTA 1 chrIII:127512-127906 ( 66) GCCAAGTTGGTTAAGGCGTGCGACTGTTA 1 chrXII:167748-168296 ( 17) GGCCGAGTGGTTAAGGCGAAAGATTAGAA 1 chrX:523842-524328 ( 22) GGCCGAGTGGTTAAGGCGAAAGATTAGAA 1 chrVIII:132812-133350 ( 40) GGCCGAGTGGTTAAGGCGAAAGATTAGAA 1 chrIV:1305384-1305895 ( 49) GGCCGAGTGGTTAAGGCGAAAGATTAGAA 1 chrIV:980734-981270 ( 67) GGCCGAGTGGTTAAGGCGAAAGATTAGAA 1 chrIV:437534-438056 ( 35) GGCCGAGTGGTTAAGGCGAAAGATTAGAA 1 chrII:226849-227387 ( 15) GGCCGAGTGGTTAAGGCGAAAGATTAGAA 1 chrXVI:880037-880583 ( 72) GCCCAGTTGGTTAAGGCACCGTGCTAATA 1 chrXIV:602090-602553 ( 50) GCCCAGTTGGTTAAGGCACCGTGCTAATA 1 chrXIV:569685-570158 ( 32) GCCCAGTTGGTTAAGGCACCGTGCTAATA 1 chrXII:1051890-1052380 ( 22) GCCCAGTTGGTTAAGGCACCGTGCTAATA 1 chrXII:734694-735007 ( 11) GCCCAGTTGGTTAAGGCACCGTGCTAATA 1 chrVII:738776-739449 ( 69) GCCCAGTTGGTTAAGGCACCGTGCTAATA 1 chrV:551048-551581 ( 57) GCCCAGTTGGTTAAGGCACCGTGCTAATA 1 chrV:443002-443500 ( 37) GCCCAGTTGGTTAAGGCACCGTGCTAATA 1 chrIX:183288-183728 ( 18) GCCCAGTTGGTTAAGGCACCGTGCTAATA 1 chrXVI:856735-857164 ( 11) GGCGTAGTCGGTAGCGCGCTCCCTTAGCA 1 chrXV:340118-340608 ( 22) GGCCCAATGGTCACGGCGTCTGGCTACGA 1 chrXIII:768170-768664 ( 38) GGCGTAGTCGGTAGCGCGCTCCCTTAGCA 1 chrXII:656716-657210 ( 57) GGCGTAGTCGGTAGCGCGCTCCCTTAGCA 1 chrXII:374186-374638 ( 1) GGCCCAATGGTCACGGCGTCTGGCTACGA 1 chrXI:490709-491241 ( 51) GGCCCAATGGTCACGGCGTCTGGCTACGA 1 chrX:197157-197619 ( 11) GGCGTAGTCGGTAGCGCGCTCCCTTAGCA 1 chrVII:774118-774642 ( 27) GGCGTAGTCGGTAGCGCGCTCCCTTAGCA 1 chrVI:204760-205201 ( 30) GGCGTAGTCGGTAGCGCGCTCCCTTAGCA 1 chrV:492194-492584 ( 49) GGCCCAATGGTCACGGCGTCTGGCTACGA 1 chrIV:410154-410685 ( 18) GGCGTAGTCGGTAGCGCGCTCCCTTAGCA 1 chrXVI:768978-769512 ( 71) AGCTCAGTTGGTAGAGCGTTCGGCTTTTA 1 chrXII:875190-875627 ( 26) AGCTCAGTTGGTAGAGCGTTCGGCTTTTA 1 chrVII:115239-115769 ( 42) AGCTCAGTTGGTAGAGCGTTCGGCTTTTA 1 chrIV:359357-359836 ( 39) AGCTCAGTTGGTAGAGCGTTCGGCTTTTA 1 chrXVI:622312-622860 ( 59) AGCTCAGTTGGGAGAGCGCCAGACTGAAG 1 chrXVI:560000-560512 ( 47) AGCTCAGTTGGGAGAGCGCCAGACTGAAG 1 chrXIV:374667-375115 ( 36) AGCTCAGTTGGGAGAGCGCCAGACTGAAG 1 chrXIII:352075-352524 ( 39) AGCTCAGTTGGGAGAGCGCCAGACTGAAG 1 chrVIII:358263-358797 ( 53) AGCTCAGTTGGGAGAGCGCCAGACTGAAG 1 chrVIII:237714-238145 ( 24) AGCTCAGTTGGGAGAGCGCCAGACTGAAG 1 chrVI:157694-158251 ( 49) AGCTCAGTTGGGAGAGCGCCAGACTGAAG 1 chrXII:731894-732269 ( 68) GCCGAGTGGTTTAAGGCGTCAGATTTAGG 1 chrX:617755-618184 ( 9) GCCGAGTGGTTTAAGGCGTCAGATTTAGG 1 chrXIII:504663-505218 ( 14) GCCGAGCGGTCTAAGGCGCCTGATTCAAG 1 chrXII:628133-628656 ( 48) GCCGAGCGGTCTAAGGCGCCTGATTCAAG 1 chrVII:857205-857671 ( 66) GCCGAGCGGTCTAAGGCGCCTGATTCAAG 1 chrVII:422882-423401 ( 10) GCCGAGCGGTCTAAGGCGCCTGATTCAAG 1 chrVII:205286-205808 ( 33) GCCGAGCGGTCTAAGGCGCCTGATTCAAG 1 chrIV:1461505-1462066 ( 57) GCCGAGCGGTCTAAGGCGCCTGATTCAAG 1 chrI:180899-181470 ( 16) GCCGAGCGGTCTAAGGCGCCTGATTCAAG 1 chrXI:83954-84446 ( 67) GCCGAGTGGTCTAAGGCGGCAGACTTAAG 1 chrX:424290-424751 ( 8) GCCGAGTGGTCTAAGGCGGCAGACTTAAG 1 chrII:9362-9898 ( 12) GCCGAGTGGTCTAAGGCGGCAGACTTAAG 1 chrXIII:586396-586929 ( 60) GTCTAGTCGGTTATGGCATCTGCTTAACA 1 chrXIII:372201-372732 ( 65) GTCTAGTCGGTTATGGCATCTGCTTAACA 1 chrXII:687662-688174 ( 27) GTCTAGTCGGTTATGGCATCTGCTTAACA 1 chrXI:379459-379922 ( 49) GTCTAGTCGGTTATGGCATCTGCTTAACA 1 chrXI:307967-308457 ( 18) GTCTAGTCGGTTATGGCATCTGCTTAACA 1 chrVIII:85106-85571 ( 46) GTCTAGTCGGTTATGGCATCTGCTTAACA 1 chrVII:823263-823716 ( 52) GTCTAGTCGGTTATGGCATCTGCTTAACA 1 chrVII:412079-412599 ( 41) GTCTAGTCGGTTATGGCATCTGCTTAACA 1 chrV:469233-469696 ( 52) GTCTAGTCGGTTATGGCATCTGCTTAACA 1 chrV:438470-438968 ( 40) GTCTAGTCGGTTATGGCATCTGCTTAACA 1 chrXI:46567-47017 ( 29) TGGCCAAGTGGTAAGGCATCGCACTCGTA 1 chrXII:605124-605645 ( 62) AGCTCAGTGGTTAGAGCTTCGTGCTTATA 1 chrIV:884169-884654 ( 8) AGCTCAGTGGTTAGAGCTTCGTGCTTATA 1 chrXV:976176-976704 ( 39) AGCTCAGTAGGAAGAGCGTCAGTCTCATA 1 chrX:422653-423294 ( 22) AGCTCAGTAGGAAGAGCGTCAGTCTCATA 1 chrX:390829-391318 ( 56) AGCTCAGTAGGAAGAGCGTCAGTCTCATA 1 chrIV:1175584-1176085 ( 53) AGCTCAGTAGGAAGAGCGTCAGTCTCATA 1 chrX:538339-538855 ( 15) TGGCGTAATGGTAACGCGTCTCCCTCCTA 1 chrXIII:131558-132129 ( 68) TGGCGTAATGGCAACGCGTCTGACTTCTA 1 chrXI:162269-162777 ( 50) TGGCGTAATGGCAACGCGTCTGACTTCTA 1 chrX:374195-374875 ( 57) TGGCGTAATGGCAACGCGTCTGACTTCTA 1 chrVII:405267-405756 ( 16) TGGCGTAATGGCAACGCGTCTGACTTCTA 1 chrXIII:302825-303243 ( 32) GGCGCGGTTGTGAACGTGGGAGGTTCCCC 1 chrXVI:435630-436198 ( 65) TGGCGCAGTGGTAGCGCAGCAGATTGCAA 1 chrVII:706912-707357 ( 60) TGGCGCAGTGGTAGCGCAGCAGATTGCAA 1 chrV:130825-131391 ( 59) AGTGTAGTGGTTATCACTTTCGGTTTTGA 1 chrII:350595-351112 ( 32) AGTGTAGTGGTTATCACTTTCGGTTTTGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCBMRKTKGKTARSGCGYCHGAYTMDWA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 41760 bayes= 6.40693 E= 2.7e-431 -88 -1345 201 -213 -1345 56 175 -180 -1345 227 -140 -412 -180 85 81 -37 49 85 -40 -196 85 -340 99 -280 -60 -159 119 -4 -280 -108 -49 123 -312 -23 146 -13 -1345 -1345 225 -154 -1345 -108 133 49 -312 -140 -140 140 168 -1345 -1345 -1345 66 -240 96 -154 -104 60 158 -1345 -412 -1345 238 -1345 -1345 240 -1345 -512 -67 -1345 203 -312 -196 99 -181 66 -96 162 -81 -104 4 13 -81 23 -1345 -1 192 -167 87 6 6 -312 -1345 181 -1345 12 -1345 -1345 -1345 168 37 30 -15 -67 33 -81 46 -37 -32 6 -140 63 140 -440 -15 -1345 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCBMRKTKGKTARSGCGYCHGAYTMDWA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 112 E= 2.7e-431 0.169643 0.000000 0.758929 0.071429 0.000000 0.276786 0.633929 0.089286 0.000000 0.910714 0.071429 0.017857 0.089286 0.339286 0.330357 0.241071 0.437500 0.339286 0.142857 0.080357 0.562500 0.017857 0.375000 0.044643 0.205357 0.062500 0.428571 0.303571 0.044643 0.089286 0.133929 0.732143 0.035714 0.160714 0.517857 0.285714 0.000000 0.000000 0.892857 0.107143 0.000000 0.089286 0.473214 0.437500 0.035714 0.071429 0.071429 0.821429 1.000000 0.000000 0.000000 0.000000 0.491071 0.035714 0.366071 0.107143 0.151786 0.285714 0.562500 0.000000 0.017857 0.000000 0.982143 0.000000 0.000000 0.991071 0.000000 0.008929 0.196429 0.000000 0.767857 0.035714 0.080357 0.375000 0.053571 0.491071 0.160714 0.580357 0.107143 0.151786 0.321429 0.205357 0.107143 0.366071 0.000000 0.187500 0.714286 0.098214 0.571429 0.196429 0.196429 0.035714 0.000000 0.660714 0.000000 0.339286 0.000000 0.000000 0.000000 1.000000 0.401786 0.232143 0.169643 0.196429 0.392857 0.107143 0.258929 0.241071 0.250000 0.196429 0.071429 0.482143 0.821429 0.008929 0.169643 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCBMRKTKGKTARSGCGYCHGAYTMDWA MEME-2 regular expression -------------------------------------------------------------------------------- G[GC]C[CGT][AC][AG][GTA]T[GT]G[GT]TA[AG][GC]GCG[TC]C[TAC]GA[CT]T[AC][AGT][TA]A -------------------------------------------------------------------------------- Time 619.30 secs. ******************************************************************************** ******************************************************************************** MOTIF HGSGCVWGTGGTKTAGTGGTARAVHYYWHS MEME-3 width = 30 sites = 40 llr = 843 E-value = 9.1e-147 ******************************************************************************** -------------------------------------------------------------------------------- Motif HGSGCVWGTGGTKTAGTGGTARAVHYYWHS MEME-3 Description -------------------------------------------------------------------------------- Simplified A 4111:342:3::::a1:::1765531:441 pos.-specific C 3:52842::::322::::::::13346135 probability G :9452317:7a:4::9:aa1:323:2::24 matrix T 3::21:31a::758::a::9322:434521 bits 2.4 * ** 2.2 * ** 1.9 * * * ** 1.7 * * * ** ** Relative 1.4 * * * ***** Entropy 1.2 * * *** ***** (30.4 bits) 1.0 ** * ***** ******* * * 0.7 ** * ************** * * 0.5 ***** *************** ** * * 0.2 ****** *************** ***** * 0.0 ------------------------------ Multilevel AGCGCCAGTGGTTTAGTGGTAAAATCCTAC consensus C GC AT A CGC TGGGCTTACG sequence T T G TCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HGSGCVWGTGGTKTAGTGGTARAVHYYWHS MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chrXV:281834-282486 + 53 4.55e-15 AACATGAAAG CGCGCAAGTGGTTTAGTGGTAAAATCCAAC GTTGCCATCG chrXIII:183765-184201 - 7 4.55e-15 CAATAAAGAT CGCGCAAGTGGTTTAGTGGTAAAATCCAAC GTTGCC chrXVI:860133-860642 + 41 8.27e-15 GTAAATAACA AGCGCAAGTGGTTTAGTGGTAAAATCCAAC GTTGCCATCG chrXV:226435-226933 - 19 8.27e-15 CAAGAAATTC AGCGCAAGTGGTTTAGTGGTAAAATCCAAC GTTGCCATCG chrX:531573-532179 + 1 8.27e-15 . AGCGCAAGTGGTTTAGTGGTAAAATCCAAC GTTGCCATCG chrX:396511-397011 - 57 8.27e-15 ATCAAAAGTA AGCGCAAGTGGTTTAGTGGTAAAATCCAAC GTTGCCATCG chrVII:930732-931236 - 61 8.27e-15 ATAATCAGTA AGCGCAAGTGGTTTAGTGGTAAAATCCAAC GTTGCCATCG chrVII:845386-845969 + 21 8.27e-15 ATAAATAACA AGCGCAAGTGGTTTAGTGGTAAAATCCAAC GTTGCCATCG chrVI:162001-162473 + 40 8.27e-15 CAAGAAAACA AGCGCAAGTGGTTTAGTGGTAAAATCCAAC GTTGCCATCG chrIV:992596-993098 + 34 8.27e-15 AACAATTGTG AGCGCAAGTGGTTTAGTGGTAAAATCCAAC GTTGCCATCG chrIV:83320-83815 + 30 8.27e-15 AAGTTCACTT AGCGCAAGTGGTTTAGTGGTAAAATCCAAC GTTGCCATCG chrVI:101116-101691 + 22 7.98e-13 AACAATAATT CGGGCGTGTGGTCTAGTGGTATGATTCTCG CTTTGGGCGA chrI:138919-139376 + 54 7.98e-13 TCAATTAGTA CGGGCGTGTGGTCTAGTGGTATGATTCTCG CTTTGGGCGA chrXIII:195902-196396 - 43 1.11e-12 CAAGTTCACA AGGGCGTGTGGTCTAGTGGTATGATTCTCG CTTTGGGCGA chrXII:92282-92890 + 11 1.11e-12 CAAGTTAATA AGGGCGTGTGGTCTAGTGGTATGATTCTCG CTTTGGGCGA chrVIII:388670-389228 - 68 2.09e-12 ACA TGGGCGTGTGGTCTAGTGGTATGATTCTCG CTTTGGGCGA chrIII:123381-123831 - 64 1.20e-10 TCAAAGG AGGGCGTGTGGTCTAGAGGTATGATTCTCG CTTAGGGTGC chrXV:594209-594668 - 9 1.61e-10 TTGATTGAAA CGCGCAAGTGGTTCAGTGGTTAGAATTTAT GCTTCCCA chrXII:448483-448983 - 10 4.02e-10 CAAGAAGTTC CGGTCCTATAGTGTAGTGGTTATCACTTTC GGTTTTGAT chrVIII:134050-134668 + 11 4.02e-10 CAGTAAGTTC CGGTCCTATAGTGTAGTGGTTATCACTTTC GGTTTTGATC chrIV:802549-803025 - 37 4.02e-10 CATGAATTGT CGGTCCTATAGTGTAGTGGTTATCACTTTC GGTTTTGATC chrIV:644985-645429 - 39 4.02e-10 ACAGTTGTTA CGGTCCTATAGTGTAGTGGTTATCACTTTC GGTTTTGATC chrV:250100-250561 + 5 6.69e-10 GTAC TGGTCCTATAGTGTAGTGGTTATCACTTTC GGTTTTGATC chrIII:168102-168624 - 31 6.69e-10 CAAGAAGTCC TGGTCCTATAGTGTAGTGGTTATCACTTTC GGTTTTGATC chrVIII:466763-467302 + 7 1.69e-09 ATTTTT AGCCTCCTTAGCTTAGTGGTAGAGCGTTGC ACTTGTAATG chrVII:779383-779901 + 23 1.69e-09 AAGTTAACCC CGGGCGGTTAGTGTAGTGGTTATCATCCCA CCCTTCCAAG chrXII:489282-489566 + 44 2.10e-09 GGTAAGAGCC TGACCGAGTAGTGTAGTGGGTGACCATACG CGAAACTCAG chrXII:468754-468993 + 59 2.10e-09 GGTAAGAGCC TGACCGAGTAGTGTAGTGGGTGACCATACG CGAAACTCAG chrVII:1004008-1004431 + 46 2.26e-09 TTCAAGGGTT TGCCTCCTTAGCTTAGTGGTAGAGCGTTGC ACTTGTAATG chrVII:661511-661949 + 68 2.26e-09 GGTAAAAATT TGCCTCCTTAGCTTAGTGGTAGAGCGTTGC ACT chrXIV:96030-96606 - 16 2.59e-09 ATCCAACACA TGGGCGGTTAGTGTAGTGGTTATCATCCCA CCCTTCCAAG chrXVI:338720-339154 - 4 4.40e-09 CATGATTTAG CAGCGCCGTGGCGCAGTGGAAGCGCGCAGG GCT chrXV:709995-710448 + 29 4.40e-09 CAAGAATTAG CAGCGCCGTGGCGCAGTGGAAGCGCGCAGG GCTCATAACC chrX:517633-518122 - 29 4.99e-09 CATAAAAGTT AAGCGCCGTGGCGCAGTGGAAGCGCGCAGG GCTCATAACC chrII:642862-643301 - 19 5.31e-09 TGTAATAGAA AGCTCGTATGGCGCAGTGGTAGCGCAGCAG ATTGCAAATC chrXIII:747730-748152 - 44 6.38e-09 ACATATGACT AGCTCGCGTGGCGTAATGGCAACGCGTCTG ACTTCTAATC chrXI:302678-303253 + 2 6.38e-09 A TGAAGCGGTGGCTCAATGGTAGAGCTTTCG ACTCCAATTA chrX:415768-416297 - 26 6.38e-09 CAACAAAAGT TGAAGCGGTGGCTCAATGGTAGAGCTTTCG ACTCCAATTA chrVII:878563-879085 - 13 6.38e-09 TATTTCAAGA TGAAGCGGTGGCTCAATGGTAGAGCTTTCG ACTCCAATTA chrIV:1256857-1257295 - 25 6.77e-09 AGATCTTCTT AGCGAAAGTGGTTCAGTGGTTAGAATTCAT GCTTCCCAAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HGSGCVWGTGGTKTAGTGGTARAVHYYWHS MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXV:281834-282486 4.6e-15 52_[+3]_18 chrXIII:183765-184201 4.6e-15 6_[-3]_64 chrXVI:860133-860642 8.3e-15 40_[+3]_30 chrXV:226435-226933 8.3e-15 18_[-3]_52 chrX:531573-532179 8.3e-15 [+3]_70 chrX:396511-397011 8.3e-15 56_[-3]_14 chrVII:930732-931236 8.3e-15 60_[-3]_10 chrVII:845386-845969 8.3e-15 20_[+3]_50 chrVI:162001-162473 8.3e-15 39_[+3]_31 chrIV:992596-993098 8.3e-15 33_[+3]_37 chrIV:83320-83815 8.3e-15 29_[+3]_41 chrVI:101116-101691 8e-13 21_[+3]_49 chrI:138919-139376 8e-13 53_[+3]_17 chrXIII:195902-196396 1.1e-12 42_[-3]_28 chrXII:92282-92890 1.1e-12 10_[+3]_60 chrVIII:388670-389228 2.1e-12 67_[-3]_3 chrIII:123381-123831 1.2e-10 63_[-3]_7 chrXV:594209-594668 1.6e-10 8_[-3]_62 chrXII:448483-448983 4e-10 9_[-3]_61 chrVIII:134050-134668 4e-10 10_[+3]_60 chrIV:802549-803025 4e-10 36_[-3]_34 chrIV:644985-645429 4e-10 38_[-3]_32 chrV:250100-250561 6.7e-10 4_[+3]_66 chrIII:168102-168624 6.7e-10 30_[-3]_40 chrVIII:466763-467302 1.7e-09 6_[+3]_64 chrVII:779383-779901 1.7e-09 22_[+3]_48 chrXII:489282-489566 2.1e-09 43_[+3]_27 chrXII:468754-468993 2.1e-09 58_[+3]_12 chrVII:1004008-1004431 2.3e-09 45_[+3]_25 chrVII:661511-661949 2.3e-09 67_[+3]_3 chrXIV:96030-96606 2.6e-09 15_[-3]_55 chrXVI:338720-339154 4.4e-09 3_[-3]_67 chrXV:709995-710448 4.4e-09 28_[+3]_42 chrX:517633-518122 5e-09 28_[-3]_42 chrII:642862-643301 5.3e-09 18_[-3]_52 chrXIII:747730-748152 6.4e-09 43_[-3]_27 chrXI:302678-303253 6.4e-09 1_[+3]_69 chrX:415768-416297 6.4e-09 25_[-3]_45 chrVII:878563-879085 6.4e-09 12_[-3]_58 chrIV:1256857-1257295 6.8e-09 24_[-3]_46 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HGSGCVWGTGGTKTAGTGGTARAVHYYWHS MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF HGSGCVWGTGGTKTAGTGGTARAVHYYWHS width=30 seqs=40 chrXV:281834-282486 ( 53) CGCGCAAGTGGTTTAGTGGTAAAATCCAAC 1 chrXIII:183765-184201 ( 7) CGCGCAAGTGGTTTAGTGGTAAAATCCAAC 1 chrXVI:860133-860642 ( 41) AGCGCAAGTGGTTTAGTGGTAAAATCCAAC 1 chrXV:226435-226933 ( 19) AGCGCAAGTGGTTTAGTGGTAAAATCCAAC 1 chrX:531573-532179 ( 1) AGCGCAAGTGGTTTAGTGGTAAAATCCAAC 1 chrX:396511-397011 ( 57) AGCGCAAGTGGTTTAGTGGTAAAATCCAAC 1 chrVII:930732-931236 ( 61) AGCGCAAGTGGTTTAGTGGTAAAATCCAAC 1 chrVII:845386-845969 ( 21) AGCGCAAGTGGTTTAGTGGTAAAATCCAAC 1 chrVI:162001-162473 ( 40) AGCGCAAGTGGTTTAGTGGTAAAATCCAAC 1 chrIV:992596-993098 ( 34) AGCGCAAGTGGTTTAGTGGTAAAATCCAAC 1 chrIV:83320-83815 ( 30) AGCGCAAGTGGTTTAGTGGTAAAATCCAAC 1 chrVI:101116-101691 ( 22) CGGGCGTGTGGTCTAGTGGTATGATTCTCG 1 chrI:138919-139376 ( 54) CGGGCGTGTGGTCTAGTGGTATGATTCTCG 1 chrXIII:195902-196396 ( 43) AGGGCGTGTGGTCTAGTGGTATGATTCTCG 1 chrXII:92282-92890 ( 11) AGGGCGTGTGGTCTAGTGGTATGATTCTCG 1 chrVIII:388670-389228 ( 68) TGGGCGTGTGGTCTAGTGGTATGATTCTCG 1 chrIII:123381-123831 ( 64) AGGGCGTGTGGTCTAGAGGTATGATTCTCG 1 chrXV:594209-594668 ( 9) CGCGCAAGTGGTTCAGTGGTTAGAATTTAT 1 chrXII:448483-448983 ( 10) CGGTCCTATAGTGTAGTGGTTATCACTTTC 1 chrVIII:134050-134668 ( 11) CGGTCCTATAGTGTAGTGGTTATCACTTTC 1 chrIV:802549-803025 ( 37) CGGTCCTATAGTGTAGTGGTTATCACTTTC 1 chrIV:644985-645429 ( 39) CGGTCCTATAGTGTAGTGGTTATCACTTTC 1 chrV:250100-250561 ( 5) TGGTCCTATAGTGTAGTGGTTATCACTTTC 1 chrIII:168102-168624 ( 31) TGGTCCTATAGTGTAGTGGTTATCACTTTC 1 chrVIII:466763-467302 ( 7) AGCCTCCTTAGCTTAGTGGTAGAGCGTTGC 1 chrVII:779383-779901 ( 23) CGGGCGGTTAGTGTAGTGGTTATCATCCCA 1 chrXII:489282-489566 ( 44) TGACCGAGTAGTGTAGTGGGTGACCATACG 1 chrXII:468754-468993 ( 59) TGACCGAGTAGTGTAGTGGGTGACCATACG 1 chrVII:1004008-1004431 ( 46) TGCCTCCTTAGCTTAGTGGTAGAGCGTTGC 1 chrVII:661511-661949 ( 68) TGCCTCCTTAGCTTAGTGGTAGAGCGTTGC 1 chrXIV:96030-96606 ( 16) TGGGCGGTTAGTGTAGTGGTTATCATCCCA 1 chrXVI:338720-339154 ( 4) CAGCGCCGTGGCGCAGTGGAAGCGCGCAGG 1 chrXV:709995-710448 ( 29) CAGCGCCGTGGCGCAGTGGAAGCGCGCAGG 1 chrX:517633-518122 ( 29) AAGCGCCGTGGCGCAGTGGAAGCGCGCAGG 1 chrII:642862-643301 ( 19) AGCTCGTATGGCGCAGTGGTAGCGCAGCAG 1 chrXIII:747730-748152 ( 44) AGCTCGCGTGGCGTAATGGCAACGCGTCTG 1 chrXI:302678-303253 ( 2) TGAAGCGGTGGCTCAATGGTAGAGCTTTCG 1 chrX:415768-416297 ( 26) TGAAGCGGTGGCTCAATGGTAGAGCTTTCG 1 chrVII:878563-879085 ( 13) TGAAGCGGTGGCTCAATGGTAGAGCTTTCG 1 chrIV:1256857-1257295 ( 25) AGCGAAAGTGGTTCAGTGGTTAGAATTCAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HGSGCVWGTGGTKTAGTGGTARAVHYYWHS MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 41180 bayes= 10.9504 E= 9.1e-147 45 67 -1197 -18 -205 -1197 230 -1197 -132 126 117 -1197 -205 9 148 -64 -364 199 -33 -205 6 99 67 -1197 27 -11 -59 6 -83 -1197 189 -132 -1197 -1197 -1197 168 6 -1197 184 -1197 -1197 -1197 241 -1197 -1197 55 -1197 122 -1197 -33 99 61 -1197 26 -1197 131 168 -1197 -1197 -1197 -164 -1197 226 -1197 -364 -1197 -1197 164 -1197 -1197 241 -1197 -1197 -1197 241 -1197 -205 -291 -191 145 117 -1197 -1197 -6 82 -1197 67 -105 61 -59 9 -64 61 41 55 -1197 -32 79 -1197 45 -205 117 -11 6 -1197 155 -291 45 36 -59 -1197 61 17 79 -33 -83 -264 141 109 -264 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HGSGCVWGTGGTKTAGTGGTARAVHYYWHS MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 40 E= 9.1e-147 0.425000 0.300000 0.000000 0.275000 0.075000 0.000000 0.925000 0.000000 0.125000 0.450000 0.425000 0.000000 0.075000 0.200000 0.525000 0.200000 0.025000 0.750000 0.150000 0.075000 0.325000 0.375000 0.300000 0.000000 0.375000 0.175000 0.125000 0.325000 0.175000 0.000000 0.700000 0.125000 0.000000 0.000000 0.000000 1.000000 0.325000 0.000000 0.675000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.275000 0.000000 0.725000 0.000000 0.150000 0.375000 0.475000 0.000000 0.225000 0.000000 0.775000 1.000000 0.000000 0.000000 0.000000 0.100000 0.000000 0.900000 0.000000 0.025000 0.000000 0.000000 0.975000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.075000 0.025000 0.050000 0.850000 0.700000 0.000000 0.000000 0.300000 0.550000 0.000000 0.300000 0.150000 0.475000 0.125000 0.200000 0.200000 0.475000 0.250000 0.275000 0.000000 0.250000 0.325000 0.000000 0.425000 0.075000 0.425000 0.175000 0.325000 0.000000 0.550000 0.025000 0.425000 0.400000 0.125000 0.000000 0.475000 0.350000 0.325000 0.150000 0.175000 0.050000 0.500000 0.400000 0.050000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HGSGCVWGTGGTKTAGTGGTARAVHYYWHS MEME-3 regular expression -------------------------------------------------------------------------------- [ACT]G[CG][GCT]C[CAG][AT]GT[GA]G[TC][TG][TC]AGTGGT[AT][AG][AGT][AGC][TCA][CT][CT][TA][AC][CG] -------------------------------------------------------------------------------- Time 895.55 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrI:3-1121 3.06e-02 100 chrI:71755-73596 7.51e-01 100 chrI:81868-82304 1.19e-01 100 chrI:138919-139376 1.82e-10 53_[+3(7.98e-13)]_17 chrI:166033-166601 2.10e-12 7_[+2(3.85e-11)]_10_[+1(5.43e-09)]_\ 36 chrI:180899-181470 3.07e-05 15_[+2(8.07e-09)]_56 chrI:182348-183027 5.33e-01 100 chrI:229221-230193 2.64e-01 100 chrII:9362-9898 3.62e-10 11_[+2(1.30e-08)]_20_[+1(4.39e-08)]_\ 22 chrII:36165-36593 1.94e-01 100 chrII:44938-45390 8.00e-01 100 chrII:59827-61349 3.73e-01 100 chrII:87971-88587 8.03e-01 100 chrII:88929-90009 5.88e-01 100 chrII:165062-165431 1.76e-01 100 chrII:167754-169665 4.12e-01 100 chrII:181287-181680 5.71e-01 100 chrII:197233-197882 1.08e-05 34_[+1(3.41e-09)]_48 chrII:226849-227387 3.98e-13 14_[+2(1.03e-10)]_19_[+1(8.42e-08)]_\ 20 chrII:266144-266661 1.99e-14 33_[+2(9.69e-14)]_10_[+1(2.60e-07)]_\ 10 chrII:311311-311827 5.97e-01 100 chrII:326590-327113 1.38e-05 26_[-2(1.71e-06)]_45 chrII:332258-333504 6.43e-01 100 chrII:347408-347923 2.52e-04 45_[+1(4.39e-08)]_37 chrII:350595-351112 9.19e-11 22_[+3(4.71e-06)]_17_[+1(4.59e-10)]_\ 13 chrII:405602-406268 4.62e-05 38_[+1(5.50e-08)]_44 chrII:415492-415909 5.06e-01 100 chrII:477031-477785 5.61e-01 100 chrII:478956-479374 3.76e-01 100 chrII:504503-504696 3.58e-01 100 chrII:544478-545098 3.55e-01 100 chrII:545861-546037 3.37e-01 100 chrII:592325-593308 1.14e-01 63_[-2(9.85e-05)]_8 chrII:604062-607123 1.96e-01 100 chrII:642862-643301 7.81e-08 18_[-3(5.31e-09)]_52 chrII:644932-645437 1.70e-09 40_[+2(2.43e-05)]_9_[+1(1.77e-10)]_\ 4 chrII:680861-682215 9.66e-01 100 chrII:812975-813183 1.36e-02 100 chrIII:3-1533 7.64e-01 100 chrIII:11092-11526 9.97e-01 100 chrIII:13999-14984 9.44e-01 100 chrIII:58754-58992 8.08e-01 100 chrIII:82347-82767 9.71e-01 100 chrIII:107191-107804 7.16e-01 100 chrIII:123381-123831 3.07e-15 28_[-1(1.86e-11)]_17_[-3(1.20e-10)]_\ 7 chrIII:127512-127906 3.14e-07 65_[+2(6.83e-11)]_6 chrIII:137751-139019 2.93e-01 100 chrIII:142165-142983 2.54e-01 100 chrIII:162510-163145 8.45e-01 100 chrIII:163443-163904 3.56e-01 100 chrIII:168102-168624 1.47e-08 30_[-3(6.69e-10)]_40 chrIII:177086-178795 9.02e-01 100 chrIII:227736-228218 1.11e-09 22_[+2(2.12e-11)]_49 chrIII:292670-293032 7.78e-01 100 chrIII:294924-295878 1.09e-01 100 chrIII:315654-316618 3.71e-01 100 chrIV:28-392 1.34e-02 100 chrIV:83320-83815 3.85e-18 29_[+3(8.27e-15)]_16_[+1(5.40e-11)]_\ 7 chrIV:117100-118233 5.79e-01 100 chrIV:125302-125590 6.47e-02 67_[+3(6.26e-05)]_3 chrIV:129951-131023 6.23e-01 100 chrIV:216621-218072 7.78e-02 8_[-1(3.27e-05)]_74 chrIV:221016-222373 8.92e-01 100 chrIV:229419-230526 9.05e-01 100 chrIV:306699-310159 4.27e-01 100 chrIV:321618-321985 4.20e-01 100 chrIV:322190-323613 4.38e-01 100 chrIV:340223-341691 4.85e-01 100 chrIV:358043-358489 6.04e-01 100 chrIV:359357-359836 5.91e-06 38_[+2(1.38e-09)]_33 chrIV:410154-410685 6.21e-13 17_[+2(7.77e-10)]_10_[+1(1.03e-07)]_\ 26 chrIV:411226-411664 4.74e-01 100 chrIV:434007-434585 1.83e-14 25_[-1(2.60e-07)]_10_[-2(9.69e-14)]_\ 18 chrIV:437534-438056 3.98e-13 34_[+2(1.03e-10)]_19_[+1(8.42e-08)] chrIV:449621-450041 9.92e-01 100 chrIV:465049-466901 1.69e-01 100 chrIV:488433-489181 4.52e-05 47_[-1(1.29e-08)]_35 chrIV:490691-491308 9.04e-01 100 chrIV:508173-509512 4.57e-01 100 chrIV:519537-520155 2.80e-04 4_[+1(4.39e-08)]_78 chrIV:520682-521416 8.22e-06 18_[+1(4.59e-10)]_64 chrIV:525056-525274 1.84e-01 100 chrIV:538966-539241 3.23e-02 100 chrIV:541239-541911 9.50e-01 100 chrIV:568672-569249 6.09e-06 17_[+1(5.50e-08)]_65 chrIV:578998-580763 3.12e-01 100 chrIV:619686-620245 1.35e-03 61_[-1(5.76e-07)]_21 chrIV:644985-645429 1.35e-14 3_[-1(4.59e-10)]_17_[-3(4.02e-10)]_\ 32 chrIV:667738-668265 1.29e-05 63_[-1(3.41e-09)]_19 chrIV:802549-803025 1.35e-14 1_[-1(4.59e-10)]_17_[-3(4.02e-10)]_\ 34 chrIV:835762-836282 1.12e-01 100 chrIV:884169-884654 4.53e-05 7_[+2(4.46e-08)]_64 chrIV:946119-946617 3.44e-04 56_[+1(8.77e-07)]_26 chrIV:980734-981270 1.79e-11 29_[-1(8.42e-08)]_19_[-2(1.03e-10)]_\ 5 chrIV:992596-993098 4.28e-18 33_[+3(8.27e-15)]_16_[+1(5.40e-11)]_\ 3 chrIV:1012643-1013961 8.67e-01 100 chrIV:1016961-1017526 1.33e-09 21_[-1(1.77e-10)]_9_[-2(2.85e-05)]_\ 23 chrIV:1062660-1063123 7.93e-01 100 chrIV:1075281-1075777 1.43e-09 [-1(3.99e-09)]_18_[-3(1.48e-05)]_34 chrIV:1095026-1095672 4.10e-03 78_[-1(1.07e-06)]_4 chrIV:1116866-1117082 7.16e-02 5_[-3(3.78e-05)]_65 chrIV:1150455-1151190 5.29e-05 77_[-1(1.26e-07)]_5 chrIV:1175584-1176085 1.86e-06 52_[+2(7.27e-08)]_19 chrIV:1201510-1202065 2.32e-13 20_[+2(9.63e-12)]_10_[+1(2.16e-08)]_\ 23 chrIV:1256857-1257295 4.03e-07 24_[-3(6.77e-09)]_46 chrIV:1259502-1260000 4.86e-01 100 chrIV:1278652-1279004 1.00e-01 100 chrIV:1300273-1301400 1.83e-01 100 chrIV:1305384-1305895 8.58e-09 48_[+2(1.03e-10)]_23 chrIV:1352323-1352749 2.20e-08 15_[-2(9.63e-12)]_56 chrIV:1354561-1356104 3.28e-01 100 chrIV:1359214-1360841 1.03e-01 100 chrIV:1401198-1403441 5.42e-01 100 chrIV:1449897-1451397 8.06e-01 100 chrIV:1461505-1462066 3.07e-05 56_[-2(8.07e-09)]_15 chrIV:1488911-1489837 9.18e-01 100 chrIV:1524139-1525674 4.77e-01 100 chrIX:1-262 8.72e-01 100 chrIX:68141-69570 9.98e-01 100 chrIX:98256-100063 3.64e-01 100 chrIX:131845-132067 3.56e-01 100 chrIX:174805-175256 1.35e-10 58_[+2(9.69e-14)]_13 chrIX:183288-183728 1.02e-07 17_[-2(2.94e-10)]_54 chrIX:197352-197808 9.47e-04 69_[+2(2.85e-05)]_2 chrIX:210486-211004 1.50e-05 17_[+1(3.41e-09)]_65 chrIX:215773-216242 7.29e-01 100 chrIX:231292-231656 8.38e-01 100 chrIX:231847-232048 4.21e-02 37_[+2(3.74e-05)]_34 chrIX:232747-232955 9.34e-01 100 chrIX:248594-249407 6.93e-01 100 chrIX:254209-254570 8.68e-02 100 chrIX:255079-255865 9.56e-01 100 chrIX:257337-258170 2.45e-01 100 chrIX:300021-300510 2.32e-13 20_[-1(2.16e-08)]_10_[-2(9.63e-12)]_\ 23 chrIX:316104-318199 7.74e-01 100 chrIX:323958-324597 3.19e-01 100 chrIX:325512-326057 1.83e-14 21_[+2(9.69e-14)]_10_[+1(2.60e-07)]_\ 22 chrIX:336102-336644 3.08e-06 33_[-1(2.76e-08)]_49 chrIX:370211-370657 1.70e-09 40_[+2(2.43e-05)]_9_[+1(1.77e-10)]_\ 4 chrIX:382168-382383 1.93e-01 100 chrIX:438473-439887 7.79e-01 100 chrV:6128-6615 8.70e-01 100 chrV:53490-53964 4.49e-01 100 chrV:61067-62185 5.05e-01 100 chrV:67152-68902 5.01e-01 100 chrV:78066-78762 5.14e-01 100 chrV:85114-86852 9.16e-01 100 chrV:99766-100340 9.63e-01 100 chrV:110498-110963 8.27e-01 100 chrV:117628-118315 8.92e-01 100 chrV:122177-123003 5.15e-02 59_[-1(6.71e-05)]_23 chrV:130825-131391 5.79e-12 31_[-1(4.59e-10)]_17_[-3(2.46e-07)]_\ 4 chrV:135155-135709 3.78e-05 50_[-1(2.16e-08)]_32 chrV:138423-140917 8.20e-01 100 chrV:152741-152971 9.75e-01 100 chrV:176870-177417 1.70e-09 13_[+2(2.43e-05)]_9_[+1(1.77e-10)]_\ 31 chrV:207116-207649 4.24e-05 70_[+1(2.60e-07)]_12 chrV:214759-215022 9.29e-01 100 chrV:250100-250561 2.18e-14 4_[+3(6.69e-10)]_17_[+1(4.59e-10)]_\ 31 chrV:250737-250994 9.99e-01 100 chrV:269193-270752 9.92e-01 100 chrV:288142-288770 7.34e-04 44_[-1(5.76e-07)]_38 chrV:304894-307447 4.31e-01 100 chrV:311782-312297 2.10e-12 41_[-1(5.43e-09)]_10_[-2(3.85e-11)]_\ 2 chrV:321937-323084 6.77e-01 100 chrV:354689-355385 6.24e-01 100 chrV:362119-362530 3.71e-01 100 chrV:396159-397811 4.06e-01 100 chrV:423066-424321 3.47e-01 100 chrV:424636-425231 8.50e-01 100 chrV:430985-431576 2.93e-02 12_[-1(6.45e-05)]_70 chrV:434383-435141 5.65e-01 100 chrV:435554-436039 2.32e-13 13_[-1(2.16e-08)]_10_[-2(9.63e-12)]_\ 30 chrV:438470-438968 1.43e-10 39_[+2(1.56e-08)]_10_[+1(1.12e-08)]_\ 4 chrV:441777-442670 8.96e-01 100 chrV:443002-443500 1.75e-13 8_[-1(3.41e-09)]_10_[-2(2.94e-10)]_\ 35 chrV:469233-469696 2.32e-06 51_[+2(1.56e-08)]_20 chrV:487111-487639 1.70e-09 13_[-1(1.77e-10)]_9_[-2(2.43e-05)]_\ 31 chrV:492194-492584 1.61e-09 20_[-1(5.76e-07)]_10_[-2(7.77e-10)]_\ 23 chrV:522756-522974 1.91e-01 100 chrV:551048-551581 1.60e-13 28_[-1(3.41e-09)]_10_[-2(2.94e-10)]_\ 15 chrVI:4453-5447 4.30e-01 100 chrVI:64200-65399 4.76e-01 100 chrVI:95465-95877 2.47e-01 100 chrVI:101116-101691 1.82e-10 21_[+3(7.98e-13)]_49 chrVI:106630-106847 2.62e-01 100 chrVI:137217-137813 7.84e-11 28_[-1(6.19e-07)]_10_[-2(6.83e-11)]_\ 15 chrVI:157694-158251 6.65e-10 1_[-1(1.07e-06)]_29_[-2(2.14e-09)]_\ 23 chrVI:162001-162473 2.16e-11 39_[+3(8.27e-15)]_31 chrVI:167234-167711 1.71e-04 77_[+1(8.77e-07)]_5 chrVI:180695-181273 1.14e-07 47_[-1(5.40e-11)]_35 chrVI:191284-191816 2.87e-04 20_[-1(1.26e-07)]_62 chrVI:204760-205201 5.22e-13 1_[-1(1.03e-07)]_10_[-2(7.77e-10)]_\ 42 chrVI:210441-210922 1.30e-01 100 chrVI:221507-222105 2.30e-01 100 chrVI:223249-224248 4.95e-01 100 chrVI:226524-226949 2.50e-13 9_[-1(2.16e-08)]_10_[-2(9.63e-12)]_\ 34 chrVI:269403-270159 2.37e-01 100 chrVII:12-1135 1.48e-01 100 chrVII:10224-10482 2.09e-01 100 chrVII:67257-67570 7.98e-01 100 chrVII:73651-74234 2.62e-02 100 chrVII:110406-110917 4.66e-05 21_[-1(2.60e-07)]_61 chrVII:115239-115769 5.91e-06 41_[+2(1.38e-09)]_30 chrVII:122013-122549 2.20e-08 45_[+2(9.63e-12)]_26 chrVII:148210-149557 8.59e-01 100 chrVII:185471-186045 2.32e-13 13_[-1(2.16e-08)]_10_[-2(9.63e-12)]_\ 30 chrVII:205286-205808 3.59e-05 32_[+2(8.07e-09)]_39 chrVII:228520-228800 7.14e-01 100 chrVII:254105-254731 6.72e-01 100 chrVII:255190-255555 4.34e-01 100 chrVII:276893-278689 3.78e-01 100 chrVII:286808-287711 8.67e-01 100 chrVII:291653-291962 8.37e-01 100 chrVII:310423-312213 9.57e-01 100 chrVII:316793-317320 9.81e-01 100 chrVII:319580-320140 1.35e-03 16_[+1(2.60e-07)]_66 chrVII:328368-329039 9.68e-01 100 chrVII:345894-346576 1.51e-01 100 chrVII:352297-352676 4.17e-01 100 chrVII:364911-366682 5.25e-02 100 chrVII:371230-371490 3.62e-01 100 chrVII:400993-401797 9.82e-01 100 chrVII:405267-405756 8.45e-13 7_[+3(6.38e-09)]_17_[+1(5.50e-08)]_\ 28 chrVII:412079-412599 1.53e-10 12_[-1(1.12e-08)]_10_[-2(1.56e-08)]_\ 31 chrVII:422882-423401 7.38e-05 9_[+2(8.07e-09)]_62 chrVII:438363-439881 2.96e-01 100 chrVII:440493-442071 3.41e-01 100 chrVII:479215-482845 2.33e-01 100 chrVII:531397-531813 5.55e-03 100 chrVII:533850-535232 8.72e-01 100 chrVII:541609-542173 1.70e-09 16_[+2(2.43e-05)]_9_[+1(1.77e-10)]_\ 28 chrVII:544396-544910 8.20e-02 100 chrVII:545118-545820 8.40e-01 100 chrVII:555134-556695 9.94e-01 100 chrVII:557017-557992 9.99e-01 100 chrVII:561399-561950 2.04e-04 45_[-1(8.42e-08)]_37 chrVII:609376-610117 7.31e-01 100 chrVII:648748-649428 7.46e-01 100 chrVII:661511-661949 1.49e-05 67_[+3(2.26e-09)]_3 chrVII:700401-701267 9.40e-01 100 chrVII:706912-707357 1.22e-11 31_[-1(4.59e-07)]_17_[-3(5.31e-09)]_\ 4 chrVII:726376-728046 7.07e-01 100 chrVII:730928-731415 7.35e-11 24_[+2(6.83e-11)]_10_[+1(6.19e-07)]_\ 19 chrVII:736167-736645 4.96e-05 29_[+1(5.50e-08)]_53 chrVII:738776-739449 9.34e-08 68_[+2(2.94e-10)]_3 chrVII:774118-774642 6.21e-13 26_[+2(7.77e-10)]_10_[+1(1.03e-07)]_\ 17 chrVII:779383-779901 6.55e-12 22_[+3(1.69e-09)]_17_[+1(3.99e-09)]_\ 13 chrVII:788300-788778 7.57e-02 100 chrVII:794148-794601 9.36e-01 100 chrVII:823263-823716 1.86e-05 51_[+2(1.56e-08)]_20 chrVII:828432-829008 1.09e-04 60_[-1(5.50e-08)]_22 chrVII:845386-845969 3.85e-18 20_[+3(8.27e-15)]_16_[+1(5.40e-11)]_\ 16 chrVII:856735-856996 1.26e-01 100 chrVII:857205-857671 7.38e-05 65_[-2(8.07e-09)]_6 chrVII:876148-876702 2.32e-13 26_[+2(9.63e-12)]_10_[+1(2.16e-08)]_\ 17 chrVII:878563-879085 1.39e-07 12_[-3(6.38e-09)]_58 chrVII:882363-883907 3.84e-01 100 chrVII:894040-895641 1.80e-01 100 chrVII:919895-920253 4.58e-01 100 chrVII:930732-931236 3.85e-18 26_[-1(5.40e-11)]_16_[-3(8.27e-15)]_\ 10 chrVII:1000342-1000605 2.66e-01 100 chrVII:1004008-1004431 7.34e-07 45_[+3(2.26e-09)]_25 chrVIII:34501-36345 9.26e-03 50_[+2(1.61e-05)]_21 chrVIII:62487-62984 4.17e-01 100 chrVIII:74902-75916 5.65e-01 100 chrVIII:85106-85571 1.30e-10 17_[-1(1.12e-08)]_10_[-2(1.56e-08)]_\ 26 chrVIII:103847-104841 5.46e-01 100 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chrXV:663535-664291 7.96e-01 100 chrXV:677958-679212 1.00e+00 100 chrXV:709995-710448 4.69e-10 28_[+3(4.40e-09)]_17_[-1(3.83e-05)]_\ 7 chrXV:759087-759515 1.53e-01 100 chrXV:779669-780942 5.06e-01 100 chrXV:832354-832733 9.44e-01 100 chrXV:854011-854455 1.02e-14 11_[-1(5.43e-09)]_10_[-2(3.85e-11)]_\ 32 chrXV:866510-867923 2.51e-01 100 chrXV:901438-901687 7.73e-01 100 chrXV:925202-925411 7.45e-02 100 chrXV:968095-968458 1.16e-01 100 chrXV:976176-976704 1.56e-09 38_[+2(7.27e-08)]_10_[+1(1.00e-06)]_\ 5 chrXV:978798-979152 5.19e-01 100 chrXV:980475-981047 5.67e-05 50_[+1(1.29e-08)]_32 chrXV:1003941-1004969 8.40e-01 100 chrXV:1025701-1026082 6.84e-01 100 chrXV:1027888-1029305 7.45e-01 100 chrXVI:55845-56514 2.19e-03 47_[-1(8.77e-07)]_35 chrXVI:75458-76743 6.99e-01 100 chrXVI:135513-135852 8.94e-01 100 chrXVI:172824-174102 3.13e-01 100 chrXVI:188534-188970 1.04e-02 32_[+3(3.23e-05)]_38 chrXVI:209981-210483 7.47e-09 17_[-1(1.77e-10)]_9_[-2(2.43e-05)]_\ 27 chrXVI:279947-280223 4.45e-01 100 chrXVI:280627-282964 3.11e-01 100 chrXVI:296959-298245 7.65e-01 100 chrXVI:302618-304280 4.94e-01 100 chrXVI:338720-339154 1.38e-05 3_[-3(4.40e-09)]_67 chrXVI:378627-379013 6.47e-01 100 chrXVI:404566-405823 7.03e-01 100 chrXVI:406174-407778 9.20e-01 100 chrXVI:435630-436198 1.50e-06 36_[-1(4.59e-07)]_10_[-2(2.81e-06)]_\ 7 chrXVI:520115-520551 3.83e-02 100 chrXVI:560000-560512 1.42e-06 46_[-2(2.14e-09)]_25 chrXVI:572026-572631 6.21e-09 35_[+1(5.40e-11)]_16_[+2(9.20e-05)]_\ 2 chrXVI:575196-575566 9.98e-01 100 chrXVI:581819-582324 2.20e-08 48_[+2(9.63e-12)]_23 chrXVI:622312-622860 7.23e-10 11_[-1(1.07e-06)]_29_[-2(2.14e-09)]_\ 13 chrXVI:645465-646269 1.24e-01 100 chrXVI:653826-655013 1.78e-01 100 chrXVI:689335-689885 7.30e-13 12_[+2(4.95e-12)]_19_[+1(5.76e-07)]_\ 22 chrXVI:699894-700709 8.64e-01 100 chrXVI:701862-702303 9.26e-01 100 chrXVI:718449-719372 6.02e-01 100 chrXVI:731655-732498 7.87e-01 100 chrXVI:744038-744628 1.77e-04 46_[+1(2.76e-06)]_36 chrXVI:768978-769512 1.18e-11 19_[-1(2.08e-09)]_33_[-2(1.38e-09)]_\ 1 chrXVI:775632-776161 9.62e-01 100 chrXVI:794447-795831 8.41e-01 100 chrXVI:810453-810892 2.06e-07 62_[+2(6.83e-11)]_9 chrXVI:819327-819887 1.78e-05 19_[+1(3.41e-09)]_63 chrXVI:829915-830324 1.50e-01 100 chrXVI:856735-857164 5.22e-13 10_[+2(7.77e-10)]_10_[+1(1.03e-07)]_\ 33 chrXVI:860133-860642 2.16e-11 40_[+3(8.27e-15)]_30 chrXVI:866399-866757 4.45e-01 100 chrXVI:880037-880583 3.57e-12 43_[-1(3.41e-09)]_10_[-2(2.94e-10)] -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************