******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--SWR1/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrI:5-1019 1.0000 100 chrI:76047-76662 1.0000 100 chrI:81877-82560 1.0000 100 chrI:138877-139361 1.0000 100 chrI:166039-166571 1.0000 100 chrI:180890-181513 1.0000 100 chrI:182326-182797 1.0000 100 chrI:229467-230192 1.0000 100 chrII:9367-9877 1.0000 100 chrII:36151-36584 1.0000 100 chrII:44909-45365 1.0000 100 chrII:60188-61320 1.0000 100 chrII:88012-88578 1.0000 100 chrII:89656-90036 1.0000 100 chrII:165097-165406 1.0000 100 chrII:167612-168231 1.0000 100 chrII:181267-181680 1.0000 100 chrII:197204-197884 1.0000 100 chrII:226852-227835 1.0000 100 chrII:242315-242677 1.0000 100 chrII:265919-266685 1.0000 100 chrII:326550-327148 1.0000 100 chrII:332213-333804 1.0000 100 chrII:347398-347966 1.0000 100 chrII:350143-351171 1.0000 100 chrII:405244-406280 1.0000 100 chrII:415505-415900 1.0000 100 chrII:477082-477780 1.0000 100 chrII:592321-593331 1.0000 100 chrII:604059-607123 1.0000 100 chrII:642860-643296 1.0000 100 chrII:644939-645901 1.0000 100 chrII:680959-682284 1.0000 100 chrII:761157-761505 1.0000 100 chrII:812990-813182 1.0000 100 chrIII:5-1320 1.0000 100 chrIII:65307-65753 1.0000 100 chrIII:82347-82770 1.0000 100 chrIII:103121-103461 1.0000 100 chrIII:118180-118923 1.0000 100 chrIII:123360-123827 1.0000 100 chrIII:127516-127886 1.0000 100 chrIII:141946-142991 1.0000 100 chrIII:163443-163897 1.0000 100 chrIII:168035-168610 1.0000 100 chrIII:177081-179302 1.0000 100 chrIII:192770-193392 1.0000 100 chrIII:227732-228434 1.0000 100 chrIII:279683-280969 1.0000 100 chrIII:281307-281687 1.0000 100 chrIII:294966-295879 1.0000 100 chrIII:315751-316618 1.0000 100 chrIV:30-394 1.0000 100 chrIV:42101-42722 1.0000 100 chrIV:51934-52526 1.0000 100 chrIV:83285-83830 1.0000 100 chrIV:87427-87915 1.0000 100 chrIV:106714-107344 1.0000 100 chrIV:117113-118208 1.0000 100 chrIV:126183-126514 1.0000 100 chrIV:129700-131027 1.0000 100 chrIV:190306-191415 1.0000 100 chrIV:216551-216772 1.0000 100 chrIV:217148-218069 1.0000 100 chrIV:221000-222386 1.0000 100 chrIV:229423-230362 1.0000 100 chrIV:304705-305344 1.0000 100 chrIV:307980-310127 1.0000 100 chrIV:321611-321976 1.0000 100 chrIV:322225-323603 1.0000 100 chrIV:340127-341711 1.0000 100 chrIV:358022-358481 1.0000 100 chrIV:359348-359842 1.0000 100 chrIV:410186-410702 1.0000 100 chrIV:411231-411675 1.0000 100 chrIV:433944-434557 1.0000 100 chrIV:437528-438199 1.0000 100 chrIV:488467-489188 1.0000 100 chrIV:489729-491289 1.0000 100 chrIV:519542-520191 1.0000 100 chrIV:520386-521455 1.0000 100 chrIV:538983-539284 1.0000 100 chrIV:568674-569317 1.0000 100 chrIV:578979-580784 1.0000 100 chrIV:619651-620250 1.0000 100 chrIV:644792-645406 1.0000 100 chrIV:667659-668263 1.0000 100 chrIV:802218-803029 1.0000 100 chrIV:835762-836261 1.0000 100 chrIV:884158-884990 1.0000 100 chrIV:946124-946621 1.0000 100 chrIV:980675-981275 1.0000 100 chrIV:992617-993365 1.0000 100 chrIV:1013389-1013937 1.0000 100 chrIV:1016943-1017534 1.0000 100 chrIV:1059221-1059859 1.0000 100 chrIV:1075090-1075937 1.0000 100 chrIV:1095131-1095746 1.0000 100 chrIV:1116451-1117160 1.0000 100 chrIV:1135290-1136525 1.0000 100 chrIV:1149734-1151198 1.0000 100 chrIV:1175588-1176075 1.0000 100 chrIV:1201478-1202443 1.0000 100 chrIV:1256776-1257296 1.0000 100 chrIV:1300462-1301356 1.0000 100 chrIV:1305380-1306124 1.0000 100 chrIV:1352311-1352764 1.0000 100 chrIV:1355719-1356205 1.0000 100 chrIV:1358446-1358963 1.0000 100 chrIV:1359161-1360792 1.0000 100 chrIV:1401024-1402031 1.0000 100 chrIV:1436443-1437133 1.0000 100 chrIV:1450252-1451256 1.0000 100 chrIV:1461448-1462060 1.0000 100 chrIV:1524133-1525675 1.0000 100 chrIX:1-265 1.0000 100 chrIX:67972-69558 1.0000 100 chrIX:99613-100101 1.0000 100 chrIX:148305-148960 1.0000 100 chrIX:174787-175248 1.0000 100 chrIX:183039-183874 1.0000 100 chrIX:197364-197979 1.0000 100 chrIX:210507-210962 1.0000 100 chrIX:248589-249066 1.0000 100 chrIX:254211-254554 1.0000 100 chrIX:257343-258157 1.0000 100 chrIX:288744-289428 1.0000 100 chrIX:299481-300507 1.0000 100 chrIX:316090-317914 1.0000 100 chrIX:324165-324616 1.0000 100 chrIX:325498-326144 1.0000 100 chrIX:335760-336644 1.0000 100 chrIX:370156-370640 1.0000 100 chrIX:375284-375581 1.0000 100 chrIX:378151-378721 1.0000 100 chrIX:438764-439885 1.0000 100 chrV:6141-6572 1.0000 100 chrV:53505-54033 1.0000 100 chrV:61068-62159 1.0000 100 chrV:85124-85448 1.0000 100 chrV:85665-86920 1.0000 100 chrV:99069-100336 1.0000 100 chrV:117250-118338 1.0000 100 chrV:130849-131470 1.0000 100 chrV:135100-135714 1.0000 100 chrV:138429-139973 1.0000 100 chrV:140179-140911 1.0000 100 chrV:166693-167965 1.0000 100 chrV:176824-177527 1.0000 100 chrV:207111-207680 1.0000 100 chrV:250103-251053 1.0000 100 chrV:270352-270936 1.0000 100 chrV:288156-288814 1.0000 100 chrV:304995-307754 1.0000 100 chrV:311780-312304 1.0000 100 chrV:354678-355397 1.0000 100 chrV:362117-362508 1.0000 100 chrV:396147-397966 1.0000 100 chrV:404051-404867 1.0000 100 chrV:409606-410055 1.0000 100 chrV:423075-424308 1.0000 100 chrV:430932-431576 1.0000 100 chrV:434390-434781 1.0000 100 chrV:435106-436041 1.0000 100 chrV:438383-438975 1.0000 100 chrV:441759-442668 1.0000 100 chrV:443010-443510 1.0000 100 chrV:469232-469727 1.0000 100 chrV:487102-487648 1.0000 100 chrV:492202-492578 1.0000 100 chrV:550939-551584 1.0000 100 chrVI:4455-5430 1.0000 100 chrVI:55655-56534 1.0000 100 chrVI:63915-65406 1.0000 100 chrVI:95457-95883 1.0000 100 chrVI:101096-101660 1.0000 100 chrVI:137200-137818 1.0000 100 chrVI:157636-158270 1.0000 100 chrVI:162004-162787 1.0000 100 chrVI:167072-167694 1.0000 100 chrVI:180632-181263 1.0000 100 chrVI:191289-191821 1.0000 100 chrVI:204778-205207 1.0000 100 chrVI:209944-210972 1.0000 100 chrVI:221716-222084 1.0000 100 chrVI:223272-224155 1.0000 100 chrVI:226536-226966 1.0000 100 chrVI:229011-229279 1.0000 100 chrVI:233505-234244 1.0000 100 chrVI:251563-252986 1.0000 100 chrVI:269858-270157 1.0000 100 chrVII:19-989 1.0000 100 chrVII:36588-37129 1.0000 100 chrVII:73031-74222 1.0000 100 chrVII:80893-81582 1.0000 100 chrVII:110381-110938 1.0000 100 chrVII:114982-115785 1.0000 100 chrVII:122007-122683 1.0000 100 chrVII:130856-131847 1.0000 100 chrVII:141497-141888 1.0000 100 chrVII:148196-149542 1.0000 100 chrVII:179762-180909 1.0000 100 chrVII:185470-186136 1.0000 100 chrVII:205297-205819 1.0000 100 chrVII:254101-254761 1.0000 100 chrVII:276893-278655 1.0000 100 chrVII:287048-287687 1.0000 100 chrVII:310396-312448 1.0000 100 chrVII:319595-320219 1.0000 100 chrVII:328383-328987 1.0000 100 chrVII:364895-366647 1.0000 100 chrVII:371255-371470 1.0000 100 chrVII:400890-401781 1.0000 100 chrVII:405268-405801 1.0000 100 chrVII:411975-412587 1.0000 100 chrVII:422883-423595 1.0000 100 chrVII:438566-439685 1.0000 100 chrVII:440271-441009 1.0000 100 chrVII:441288-441532 1.0000 100 chrVII:452264-452588 1.0000 100 chrVII:531387-531786 1.0000 100 chrVII:533505-535230 1.0000 100 chrVII:541635-542221 1.0000 100 chrVII:544392-546168 1.0000 100 chrVII:554769-555879 1.0000 100 chrVII:561005-561954 1.0000 100 chrVII:635671-636215 1.0000 100 chrVII:648750-649399 1.0000 100 chrVII:661479-661941 1.0000 100 chrVII:700102-701257 1.0000 100 chrVII:706882-707354 1.0000 100 chrVII:726324-728034 1.0000 100 chrVII:729526-730151 1.0000 100 chrVII:730914-731469 1.0000 100 chrVII:736176-736551 1.0000 100 chrVII:738869-739565 1.0000 100 chrVII:774127-774646 1.0000 100 chrVII:779384-779945 1.0000 100 chrVII:788298-788797 1.0000 100 chrVII:794151-794593 1.0000 100 chrVII:823263-823716 1.0000 100 chrVII:828404-829339 1.0000 100 chrVII:843339-844078 1.0000 100 chrVII:845396-845946 1.0000 100 chrVII:856749-856961 1.0000 100 chrVII:857200-857688 1.0000 100 chrVII:876157-876754 1.0000 100 chrVII:878571-879081 1.0000 100 chrVII:919983-920228 1.0000 100 chrVII:921986-922343 1.0000 100 chrVII:930779-931255 1.0000 100 chrVII:1000355-1000593 1.0000 100 chrVII:1003938-1004437 1.0000 100 chrVIII:62271-63045 1.0000 100 chrVIII:74880-75913 1.0000 100 chrVIII:85050-85563 1.0000 100 chrVIII:103826-104723 1.0000 100 chrVIII:115911-116438 1.0000 100 chrVIII:125871-127484 1.0000 100 chrVIII:132754-133367 1.0000 100 chrVIII:134054-134616 1.0000 100 chrVIII:145969-146455 1.0000 100 chrVIII:148926-149444 1.0000 100 chrVIII:160505-161007 1.0000 100 chrVIII:164536-165142 1.0000 100 chrVIII:175044-175382 1.0000 100 chrVIII:237690-238152 1.0000 100 chrVIII:281085-281808 1.0000 100 chrVIII:296845-297254 1.0000 100 chrVIII:358167-358799 1.0000 100 chrVIII:381515-383386 1.0000 100 chrVIII:388652-389215 1.0000 100 chrVIII:466745-467432 1.0000 100 chrVIII:475479-475909 1.0000 100 chrVIII:491789-492291 1.0000 100 chrVIII:505805-506239 1.0000 100 chrVIII:555985-557218 1.0000 100 chrVIII:562255-562575 1.0000 100 chrX:58707-59499 1.0000 100 chrX:73301-76482 1.0000 100 chrX:89994-90458 1.0000 100 chrX:115439-116865 1.0000 100 chrX:139188-140820 1.0000 100 chrX:146940-147280 1.0000 100 chrX:156570-157899 1.0000 100 chrX:197158-197618 1.0000 100 chrX:204480-205051 1.0000 100 chrX:233673-234202 1.0000 100 chrX:353986-354527 1.0000 100 chrX:355136-355737 1.0000 100 chrX:373399-374841 1.0000 100 chrX:378106-378586 1.0000 100 chrX:390795-391328 1.0000 100 chrX:396543-397036 1.0000 100 chrX:407108-407814 1.0000 100 chrX:414747-415277 1.0000 100 chrX:415681-416321 1.0000 100 chrX:422677-423295 1.0000 100 chrX:424288-424770 1.0000 100 chrX:517411-518160 1.0000 100 chrX:523854-524392 1.0000 100 chrX:531543-532186 1.0000 100 chrX:538346-539135 1.0000 100 chrX:541319-541770 1.0000 100 chrX:542761-543417 1.0000 100 chrX:554589-556401 1.0000 100 chrX:607794-609016 1.0000 100 chrX:617758-618270 1.0000 100 chrX:651080-651622 1.0000 100 chrX:690419-690843 1.0000 100 chrX:703255-703645 1.0000 100 chrX:745175-745734 1.0000 100 chrXI:1-1050 1.0000 100 chrXI:46611-47030 1.0000 100 chrXI:67745-68031 1.0000 100 chrXI:74361-74990 1.0000 100 chrXI:83950-84726 1.0000 100 chrXI:93146-93468 1.0000 100 chrXI:108730-109091 1.0000 100 chrXI:140720-141430 1.0000 100 chrXI:158141-159295 1.0000 100 chrXI:162282-162738 1.0000 100 chrXI:202819-203314 1.0000 100 chrXI:219558-220555 1.0000 100 chrXI:302685-303247 1.0000 100 chrXI:307873-308453 1.0000 100 chrXI:313154-313703 1.0000 100 chrXI:322460-322687 1.0000 100 chrXI:326093-327470 1.0000 100 chrXI:379440-379919 1.0000 100 chrXI:382200-382466 1.0000 100 chrXI:385586-385995 1.0000 100 chrXI:430505-431668 1.0000 100 chrXI:451878-452408 1.0000 100 chrXI:458341-458961 1.0000 100 chrXI:487654-487938 1.0000 100 chrXI:490678-491476 1.0000 100 chrXI:513025-514426 1.0000 100 chrXI:517759-518110 1.0000 100 chrXI:578716-579436 1.0000 100 chrXI:617996-619286 1.0000 100 chrXI:665664-666795 1.0000 100 chrXII:5-280 1.0000 100 chrXII:5440-5943 1.0000 100 chrXII:10993-11984 1.0000 100 chrXII:39842-40477 1.0000 100 chrXII:48688-49162 1.0000 100 chrXII:72989-73599 1.0000 100 chrXII:84131-84465 1.0000 100 chrXII:92282-92929 1.0000 100 chrXII:127149-128090 1.0000 100 chrXII:167664-168308 1.0000 100 chrXII:214619-215175 1.0000 100 chrXII:241549-242027 1.0000 100 chrXII:260855-261413 1.0000 100 chrXII:262839-263941 1.0000 100 chrXII:282106-283595 1.0000 100 chrXII:331757-332579 1.0000 100 chrXII:366014-366552 1.0000 100 chrXII:374197-374605 1.0000 100 chrXII:384277-384824 1.0000 100 chrXII:426889-427524 1.0000 100 chrXII:448111-448973 1.0000 100 chrXII:459632-460678 1.0000 100 chrXII:468758-468983 1.0000 100 chrXII:489288-489560 1.0000 100 chrXII:498283-499697 1.0000 100 chrXII:522135-522454 1.0000 100 chrXII:581550-581975 1.0000 100 chrXII:592281-593133 1.0000 100 chrXII:604910-605672 1.0000 100 chrXII:628076-628636 1.0000 100 chrXII:656710-657215 1.0000 100 chrXII:673161-674350 1.0000 100 chrXII:687662-688173 1.0000 100 chrXII:712864-713653 1.0000 100 chrXII:731902-732268 1.0000 100 chrXII:734701-735012 1.0000 100 chrXII:781014-781903 1.0000 100 chrXII:784116-784573 1.0000 100 chrXII:793687-795260 1.0000 100 chrXII:796371-797449 1.0000 100 chrXII:818484-820155 1.0000 100 chrXII:837751-839200 1.0000 100 chrXII:875191-875625 1.0000 100 chrXII:897577-899650 1.0000 100 chrXII:921742-922594 1.0000 100 chrXII:932062-932552 1.0000 100 chrXII:962833-963519 1.0000 100 chrXII:975753-976270 1.0000 100 chrXII:1017630-1019425 1.0000 100 chrXII:1027372-1028587 1.0000 100 chrXII:1051903-1052428 1.0000 100 chrXII:1064050-1065379 1.0000 100 chrXIII:5296-5813 1.0000 100 chrXIII:14506-15138 1.0000 100 chrXIII:91617-92109 1.0000 100 chrXIII:123269-124732 1.0000 100 chrXIII:131401-132301 1.0000 100 chrXIII:145773-146298 1.0000 100 chrXIII:168590-169048 1.0000 100 chrXIII:183770-184198 1.0000 100 chrXIII:195664-196409 1.0000 100 chrXIII:224052-224413 1.0000 100 chrXIII:225238-226685 1.0000 100 chrXIII:236416-236950 1.0000 100 chrXIII:251371-252027 1.0000 100 chrXIII:258994-259525 1.0000 100 chrXIII:267640-268384 1.0000 100 chrXIII:290485-291116 1.0000 100 chrXIII:296278-298996 1.0000 100 chrXIII:302878-303113 1.0000 100 chrXIII:320959-321326 1.0000 100 chrXIII:352067-352542 1.0000 100 chrXIII:362834-363328 1.0000 100 chrXIII:372179-372732 1.0000 100 chrXIII:378884-379659 1.0000 100 chrXIII:392334-392974 1.0000 100 chrXIII:420312-420861 1.0000 100 chrXIII:463264-463877 1.0000 100 chrXIII:480148-480899 1.0000 100 chrXIII:504661-505236 1.0000 100 chrXIII:550489-553355 1.0000 100 chrXIII:572698-573352 1.0000 100 chrXIII:586371-586918 1.0000 100 chrXIII:650710-651725 1.0000 100 chrXIII:730810-733611 1.0000 100 chrXIII:742354-743105 1.0000 100 chrXIII:747746-748155 1.0000 100 chrXIII:754399-754948 1.0000 100 chrXIII:767991-768657 1.0000 100 chrXIII:807682-808558 1.0000 100 chrXIII:837693-838481 1.0000 100 chrXIII:901555-902015 1.0000 100 chrXIII:923408-924361 1.0000 100 chrXIV:6488-7178 1.0000 100 chrXIV:19107-19677 1.0000 100 chrXIV:62007-64561 1.0000 100 chrXIV:89011-90384 1.0000 100 chrXIV:96026-96629 1.0000 100 chrXIV:102490-102992 1.0000 100 chrXIV:104569-105237 1.0000 100 chrXIV:241103-241779 1.0000 100 chrXIV:330310-331114 1.0000 100 chrXIV:374615-375538 1.0000 100 chrXIV:442735-443253 1.0000 100 chrXIV:443453-444817 1.0000 100 chrXIV:470924-471658 1.0000 100 chrXIV:493984-495651 1.0000 100 chrXIV:499242-500749 1.0000 100 chrXIV:546936-547437 1.0000 100 chrXIV:560110-561178 1.0000 100 chrXIV:567890-568624 1.0000 100 chrXIV:569599-570158 1.0000 100 chrXIV:585519-586569 1.0000 100 chrXIV:602097-602549 1.0000 100 chrXIV:631522-632143 1.0000 100 chrXIV:632375-632913 1.0000 100 chrXIV:716059-716589 1.0000 100 chrXIV:725879-726413 1.0000 100 chrXIV:783486-784315 1.0000 100 chrXV:6-987 1.0000 100 chrXV:44814-45195 1.0000 100 chrXV:79567-80153 1.0000 100 chrXV:92144-94875 1.0000 100 chrXV:109602-110013 1.0000 100 chrXV:110842-111261 1.0000 100 chrXV:113498-114195 1.0000 100 chrXV:161083-161436 1.0000 100 chrXV:167554-168548 1.0000 100 chrXV:201150-201908 1.0000 100 chrXV:216218-216703 1.0000 100 chrXV:226358-226933 1.0000 100 chrXV:228055-228638 1.0000 100 chrXV:252205-254127 1.0000 100 chrXV:273540-273840 1.0000 100 chrXV:274262-275073 1.0000 100 chrXV:281492-282553 1.0000 100 chrXV:287996-288414 1.0000 100 chrXV:300845-301441 1.0000 100 chrXV:340088-340609 1.0000 100 chrXV:353878-354338 1.0000 100 chrXV:438443-439032 1.0000 100 chrXV:464223-465038 1.0000 100 chrXV:486842-487757 1.0000 100 chrXV:505087-505510 1.0000 100 chrXV:571649-572167 1.0000 100 chrXV:594205-594664 1.0000 100 chrXV:616693-617345 1.0000 100 chrXV:663513-664166 1.0000 100 chrXV:677972-679219 1.0000 100 chrXV:710006-710531 1.0000 100 chrXV:712198-712851 1.0000 100 chrXV:732785-733603 1.0000 100 chrXV:738220-738558 1.0000 100 chrXV:779679-780998 1.0000 100 chrXV:832386-832988 1.0000 100 chrXV:853977-854463 1.0000 100 chrXV:866492-868099 1.0000 100 chrXV:968133-968456 1.0000 100 chrXV:976179-976675 1.0000 100 chrXV:978820-979139 1.0000 100 chrXV:980469-981058 1.0000 100 chrXV:1003965-1004462 1.0000 100 chrXV:1025679-1026576 1.0000 100 chrXV:1027591-1029176 1.0000 100 chrXVI:55815-56531 1.0000 100 chrXVI:68985-69512 1.0000 100 chrXVI:75475-76788 1.0000 100 chrXVI:88350-88955 1.0000 100 chrXVI:99305-99674 1.0000 100 chrXVI:153357-154230 1.0000 100 chrXVI:188132-189132 1.0000 100 chrXVI:210001-210505 1.0000 100 chrXVI:280596-282953 1.0000 100 chrXVI:302557-304225 1.0000 100 chrXVI:338581-339166 1.0000 100 chrXVI:360027-360382 1.0000 100 chrXVI:378649-379000 1.0000 100 chrXVI:404563-405855 1.0000 100 chrXVI:406179-407738 1.0000 100 chrXVI:435454-436198 1.0000 100 chrXVI:520123-520542 1.0000 100 chrXVI:559992-560504 1.0000 100 chrXVI:572025-572800 1.0000 100 chrXVI:581816-582310 1.0000 100 chrXVI:622238-622867 1.0000 100 chrXVI:689337-690226 1.0000 100 chrXVI:699869-700721 1.0000 100 chrXVI:731587-733187 1.0000 100 chrXVI:744031-744643 1.0000 100 chrXVI:745900-746921 1.0000 100 chrXVI:768752-769516 1.0000 100 chrXVI:775647-776195 1.0000 100 chrXVI:794431-794809 1.0000 100 chrXVI:810469-810879 1.0000 100 chrXVI:819328-819852 1.0000 100 chrXVI:856750-857121 1.0000 100 chrXVI:860112-860662 1.0000 100 chrXVI:880055-880589 1.0000 100 chrXVI:882750-883614 1.0000 100 chrXVI:910843-911800 1.0000 100 chrXVI:918787-919155 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--SWR1/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--SWR1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--SWR1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 543 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 54300 N= 543 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.302 C 0.198 G 0.198 T 0.302 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--SWR1/background): A 0.313 C 0.187 G 0.187 T 0.313 ******************************************************************************** ******************************************************************************** MOTIF MDMBSGGRATCGAACCSVKGAYCTY MEME-1 width = 25 sites = 101 llr = 1806 E-value = 8.7e-375 ******************************************************************************** -------------------------------------------------------------------------------- Motif MDMBSGGRATCGAACCSVKGAYCTY MEME-1 Description -------------------------------------------------------------------------------- Simplified A 333:13:55:::aa::13:27:::1 pos.-specific C 5:554:::2:7:::a7522:16625 probability G 142257a52::a::::34581121: matrix T 13:3::::1a3::::21:3:13164 bits 2.4 * * * 2.2 * * * 1.9 * * * 1.7 * * ** * Relative 1.5 * ****** * Entropy 1.2 ** ******* * (25.8 bits) 1.0 *** ******* * * 0.7 ***** ******** * ** 0.5 ******** **************** 0.2 ************************* 0.0 ------------------------- Multilevel CGCCGGGAATCGAACCCGGGACCTC consensus ATATCA G T TGAT T CT sequence A G CC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MDMBSGGRATCGAACCSVKGAYCTY MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------- chrXIV:631522-632143 + 70 1.68e-14 AATGGGGGCG AGCCGGGACTCGAACCCGGGACCTC CCGCAC chrIII:123360-123827 + 40 1.68e-14 ATGTGGGGCG AGCCGGGACTCGAACCCGGGACCTC CCGCACCCTA chrXV:853977-854463 + 23 4.34e-12 AAATTGGACG CAACCGGAATCGAACCGATGACCTC TTCCTTGCAA chrXII:214619-215175 + 42 4.34e-12 TAAATGGACG CAACCGGAATCGAACCGATGACCTC TTCCTTGCAA chrV:311780-312304 + 37 4.34e-12 TCATTGGACG CAACCGGAATCGAACCGATGACCTC TTCCTTGCAA chrI:166039-166571 - 54 4.34e-12 AATTTGGACG CAACCGGAATCGAACCGATGACCTC TTCCTTGCAA chrXV:663513-664166 + 29 1.28e-11 AAAACGATTT CGCCCAGGATCGAACTGGGGACGTT CTGCGTGTTA chrXIII:586371-586918 + 48 1.28e-11 AAAATGATTT CGCCCAGGATCGAACTGGGGACGTT CTGCGTGTTA chrXIII:420312-420861 + 58 1.28e-11 AAAATGATTT CGCCCAGGATCGAACTGGGGACGTT CTGCGTGTTA chrXIII:372179-372732 + 46 1.28e-11 AAAATGATTT CGCCCAGGATCGAACTGGGGACGTT CTGCGTGTTA chrXI:307873-308453 + 37 1.28e-11 AAATTGATTT CGCCCAGGATCGAACTGGGGACGTT CTGCGTGTTA chrVIII:85050-85563 + 48 1.28e-11 AAATTGATTT CGCCCAGGATCGAACTGGGGACGTT CTGCGTGTTA chrVII:411975-412587 + 69 1.28e-11 AACTTGATTT CGCCCAGGATCGAACTGGGGACGTT CTGCGTG chrV:469232-469727 - 71 1.28e-11 GATTT CGCCCAGGATCGAACTGGGGACGTT CTGCGTGTTA chrIV:1256776-1257296 + 28 1.80e-11 AAAATGCGGA AGCCGGGAATCGAACCCGGGCCCCA TGCTTGGGAA chrVIII:475479-475909 + 68 2.13e-11 AAAATGTTCC AACCGAGGATCGAACTCGGGACCTT TGCCGTGT chrIV:1075090-1075937 + 15 2.13e-11 CAAATGTTCC AACCGAGGATCGAACTCGGGACCTT TGCCGTGTGA chrXVI:880055-880589 + 30 4.75e-11 GAAATGGTCT CTAGCGGGATCGAACCGCTGATCCC CGCGTTATTA chrXVI:819328-819852 - 32 4.75e-11 TAAATGGTCT CTAGCGGGATCGAACCGCTGATCCC CGCGTTATTA chrXIV:569599-570158 + 45 4.75e-11 AGAATGGTCT CTAGCGGGATCGAACCGCTGATCCC CGCGTTATTA chrXII:734701-735012 - 39 4.75e-11 TAAATGGTCT CTAGCGGGATCGAACCGCTGATCCC CGCGTTATTA chrIX:210507-210962 - 24 4.75e-11 AATATGGTCT CTAGCGGGATCGAACCGCTGATCCC CGCGTTATTA chrIX:183039-183874 + 40 4.75e-11 TAAGTGGTCT CTAGCGGGATCGAACCGCTGATCCC CGCGTTATTA chrII:197204-197884 - 43 4.75e-11 AAAATGGTCT CTAGCGGGATCGAACCGCTGATCCC CGCGTTATTA chrXV:980469-981058 - 44 7.52e-11 AAAAGGGGCG AGCTGGGAATTGAACCCAGGGCCTC TCGCATGCTT chrXV:226358-226933 + 22 7.52e-11 AATTTGCGCA AGCCCGGAATCGAACCGGGGGCCCA ACGATGGCAA chrXIV:546936-547437 - 30 7.52e-11 TAACGGGGCG AGCTGGGAATTGAACCCAGGGCCTC TCGCATGCTT chrXII:92282-92929 - 65 7.52e-11 TAAAGGGGCG AGCTGGGAATTGAACCCAGGGCCTC TCGCATGCTT chrX:531543-532186 - 54 7.52e-11 AAACTGCGCA AGCCCGGAATCGAACCGGGGGCCCA ACGATGGCAA chrVIII:388652-389215 + 16 7.52e-11 TAATGGGGCG AGCTGGGAATTGAACCCAGGGCCTC TCGCATGCTT chrVII:845396-845946 - 68 7.52e-11 ATTGCGCA AGCCCGGAATCGAACCGGGGGCCCA ACGATGGCAA chrXVI:856750-857121 - 59 2.71e-10 AAAATGGACG AGTCCGGAATCGAACCGGAGACCTC TCCCATGCTA chrXIII:320959-321326 + 61 2.71e-10 AAAATGGACG AGTCCGGAATCGAACCGGAGACCTC TCCCATGCTA chrXII:656710-657215 + 28 2.71e-10 TACTTGGACG AGTCCGGAATCGAACCGGAGACCTC TCCCATGCTA chrVII:774127-774646 - 55 2.71e-10 AATTTGGACG AGTCCGGAATCGAACCGGAGACCTC TCCCATGCTA chrIV:410186-410702 - 27 2.71e-10 AATTTGGACG AGTCCGGAATCGAACCGGAGACCTC TCCCATGCTA chrIX:197364-197979 - 12 3.54e-10 ATAACTCCGA AGCGGGGAGTCGAACCCCGGTCTCC ACGGTGAGAA chrIV:1016943-1017534 + 25 3.54e-10 GAAACTCCGA AGCGGGGAGTCGAACCCCGGTCTCC ACGGTGAGAA chrIV:488467-489188 + 26 4.60e-10 ATTCTGATCC AACCGAGGTTCGAACTCGGGATCTT CGCCGTGTAA chrXIII:131401-132301 + 30 5.23e-10 AAAGCACTCA CGATGGGGGTCGAACCCATAATCTT CTGATTAGAA chrXI:162282-162738 + 33 5.23e-10 AAAACACTCA CGATGGGGGTCGAACCCATAATCTT CTGATTAGAA chrX:355136-355737 - 29 5.23e-10 AAAGCACTCA CGATGGGGGTCGAACCCATAATCTT CTGATTAGAA chrVII:779384-779945 - 43 5.23e-10 ATCTTGAGCG GTACGAGAATCGAACCCGTGTCCCC ACCTTGGAAG chrVII:736176-736551 - 68 5.23e-10 AACACTCA CGATGGGGGTCGAACCCATAATCTT CTGATTAGAA chrVII:405268-405801 - 27 5.23e-10 AAAGCACTCA CGATGGGGGTCGAACCCATAATCTT CTGATTAGAA chrXI:202819-203314 - 25 1.10e-09 AGAAAGCCCT GTAGGGGGCTCGAACCCCTAACCTT ATGATTAAGA chrX:414747-415277 - 46 1.10e-09 TATTAGCCCT GTAGGGGGCTCGAACCCCTAACCTT ATGATTAAGA chrVII:876157-876754 - 31 1.10e-09 AGAAAGCCCT GTAGGGGGCTCGAACCCCTAACCTT ATGATTAAGA chrVII:122007-122683 - 16 1.10e-09 GAATAGCCCT GTAGGGGGCTCGAACCCCTAACCTT ATGATTAAGA chrV:135100-135714 + 74 1.10e-09 AGAAAGCCCT GTAGGGGGCTCGAACCCCTAACCTT AT chrXII:604910-605672 + 65 1.57e-09 AAAGTGCTCG AGGTGGGGATTGAACCCACGACGGT CGCGTTGCTT chrIII:168035-168610 + 35 2.20e-09 AAAAAGGTCC TACCCGGATTCGAACCGGGGTTGTC CGGATCAAAA chrXV:113498-114195 - 48 2.47e-09 AAAATGCTTC CAATCGGATTTGAACCGATGATCTC CACATTACTA chrX:58707-59499 + 53 2.47e-09 TATATGCTTC CAATCGGATTTGAACCGATGATCTC CACATTACTA chrIX:325498-326144 - 19 2.47e-09 AAATTGCTTC CAATCGGATTTGAACCGATGATCTC CACATTACTA chrIV:433944-434557 + 70 2.47e-09 AATATGCTTC CAATCGGATTTGAACCGATGATCTC CACATT chrXV:438443-439032 - 21 2.75e-09 AGAACTCCTC ATAGGGGGCTCGAACCCCTGACATT TCGGTATCCT chrXI:578716-579436 - 4 2.75e-09 AGAACTCCTC ATAGGGGGCTCGAACCCCTGACATT TCG chrXV:340088-340609 + 7 3.81e-09 CTTCCC CGCCAGGACTTGAACCTGGAATCTT CTGGTTCGTA chrXII:374197-374605 - 46 3.81e-09 AAATCTTCCC CGCCAGGACTTGAACCTGGAATCTT CTGGTTCGTA chrV:492202-492578 + 18 3.81e-09 AATCCTTCCC CGCCAGGACTTGAACCTGGAATCTT CTGGTTCGTA chrIV:619651-620250 + 75 3.81e-09 AAATCTTCCC CGCCAGGACTTGAACCTGGAATCTT C chrVII:541635-542221 - 13 4.24e-09 AACACTCCGA TACGGGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrV:487102-487648 + 12 4.24e-09 AATACTCCGA TACGGGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrV:176824-177527 - 15 4.24e-09 AGTACTCCGA TACGGGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrXIV:632375-632913 - 48 1.27e-08 AAAACGACCC CAGTGAGGGTTGAACTCACGATCTT GCGATTAACA chrXIV:102490-102992 - 68 1.27e-08 AACGACCC CAGTGAGGGTTGAACTCACGATCTT GCGATTAACA chrXII:975753-976270 + 28 1.27e-08 TAAACGACCC CAGTGAGGGTTGAACTCACGATCTT GCGATTAACA chrXI:74361-74990 - 42 1.27e-08 TAAGCGACCC CAGTGAGGGTTGAACTCACGATCTT GCGATTAACA chrVII:730914-731469 - 39 1.27e-08 AAAACGACCC CAGTGAGGGTTGAACTCACGATCTT GCGATTAACA chrVI:137200-137818 + 33 1.27e-08 AAAACGACCC CAGTGAGGGTTGAACTCACGATCTT GCGATTAACA chrXVI:622238-622867 + 44 1.68e-08 TAAATGCGAA TTCTGTGGATCGAACACAGGACCTC CAGATAACTT chrXVI:559992-560504 + 6 1.68e-08 GCGAA TTCTGTGGATCGAACACAGGACCTC CAGATAACTT chrVIII:358167-358799 + 51 1.68e-08 AATATGCGAA TTCTGTGGATCGAACACAGGACCTC CAGATAACTT chrVI:157636-158270 + 19 1.68e-08 TGAATGCGAA TTCTGTGGATCGAACACAGGACCTC CAGATAACTT chrX:422677-423295 - 43 2.01e-08 AATGTGCTCC AGGGGAGGTTCGAACTCTCGACCTT CAGATTATGA chrX:390795-391328 + 38 2.01e-08 AATATGCTCC AGGGGAGGTTCGAACTCTCGACCTT CAGATTATGA chrXVI:55815-56531 + 52 2.63e-08 TAATTGAAAC GGACAGGAATTGAACCTGCAACCCT TCGATTGCAA chrVII:287048-287687 + 39 2.63e-08 AAAATGAAAC GGACAGGAATTGAACCTGCAACCCT TCGATTGCAA chrXVI:744031-744643 - 38 3.12e-08 ATTTTGCCAC CTGTCAGAATTGAACTAACGACCTT TGCATTACAA chrXII:167664-168308 + 14 4.02e-08 ATAACGACAA CTGCAGGACTCGAACCTGCGCGGGC AAAGCCCAAA chrVIII:132754-133367 + 22 4.02e-08 TTATCGACAA CTGCAGGACTCGAACCTGCGCGGGC AAAGCCCAAA chrIV:980675-981275 + 55 4.02e-08 AAAACGACAA CTGCAGGACTCGAACCTGCGCGGGC AAAGCCCAAA chrIV:437528-438199 - 10 4.02e-08 ATGACGACAA CTGCAGGACTCGAACCTGCGCGGGC AAAGCCCAA chrI:182326-182797 + 17 4.02e-08 ATAACGACAA CTGCAGGACTCGAACCTGCGCGGGC AAAGCCCAAA chrVII:706882-707354 + 46 6.02e-08 AAAAAGCTCG CACTCAGGATCGAACTAAGGACCAA CAGATTTGCA chrXVI:338581-339166 + 31 1.37e-07 AATTTAGCGC CGCTCGGTTTCGATCCGAGGACATC AGGGTTATGA chrXV:710006-710531 - 24 1.37e-07 AAATTAGCGC CGCTCGGTTTCGATCCGAGGACATC AGGGTTATGA chrXIV:725879-726413 + 44 1.69e-07 ATACTGAAGG ATGCGAGGTTCGAACTCGCGCGGAC AACCGTCCAA chrII:347398-347966 - 24 1.69e-07 TTACTGAAGG ATGCGAGGTTCGAACTCGCGCGGAC AACCGTCCAA chrII:9367-9877 - 64 1.69e-07 ATACTGAAGG ATGCGAGGTTCGAACTCGCGCGGAC AACCGTCCAA chrXII:426889-427524 - 17 2.21e-07 AATTCTCCGC GACGGGGAATTGAACCCCGATCTGG CACGCGACAA chrX:541319-541770 - 55 2.21e-07 AAATCTCCGC GACGGGGAATTGAACCCCGATCTGG CACGCGACAA chrX:204480-205051 - 61 2.21e-07 AAATCTCCGC GACGGGGAATTGAACCCCGATCTGG CACGCGACAA chrIV:568674-569317 - 60 2.21e-07 AATTCTCCGC GACGGGGAATTGAACCCCGATCTGG CACGCGACAA chrXI:313154-313703 + 29 2.52e-07 AAAATGCCAT CTCCTAGAATCGAACCAGGGTTTCA TCGGCCACAA chrVII:110381-110938 + 22 2.52e-07 AAATTGCCAT CTCCTAGAATCGAACCAGGGTTTCA TCGGCCACAA chrV:434390-434781 + 12 2.52e-07 AAAATGCCAT CTCCTAGAATCGAACCAGGGTTTCA TCGGCCACAA chrV:207111-207680 - 53 2.52e-07 AATATGCCAT CTCCTAGAATCGAACCAGGGTTTCA TCGGCCACAA chrV:288156-288814 + 14 2.86e-07 AAAACGACAC CAGCAGGATTTGAACCAGCGCGGGC AGAGCCCAAC chrVI:191289-191821 + 14 6.55e-07 AATGCGTCAC AGACAGGATTCGAACCTGCGCAGGT AAAACCCAAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MDMBSGGRATCGAACCSVKGAYCTY MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:631522-632143 1.7e-14 69_[+1]_6 chrIII:123360-123827 1.7e-14 39_[+1]_36 chrXV:853977-854463 4.3e-12 22_[+1]_53 chrXII:214619-215175 4.3e-12 41_[+1]_34 chrV:311780-312304 4.3e-12 36_[+1]_39 chrI:166039-166571 4.3e-12 53_[-1]_22 chrXV:663513-664166 1.3e-11 28_[+1]_47 chrXIII:586371-586918 1.3e-11 47_[+1]_28 chrXIII:420312-420861 1.3e-11 57_[+1]_18 chrXIII:372179-372732 1.3e-11 45_[+1]_30 chrXI:307873-308453 1.3e-11 36_[+1]_39 chrVIII:85050-85563 1.3e-11 47_[+1]_28 chrVII:411975-412587 1.3e-11 68_[+1]_7 chrV:469232-469727 1.3e-11 70_[-1]_5 chrIV:1256776-1257296 1.8e-11 27_[+1]_48 chrVIII:475479-475909 2.1e-11 67_[+1]_8 chrIV:1075090-1075937 2.1e-11 14_[+1]_61 chrXVI:880055-880589 4.8e-11 29_[+1]_46 chrXVI:819328-819852 4.8e-11 31_[-1]_44 chrXIV:569599-570158 4.8e-11 44_[+1]_31 chrXII:734701-735012 4.8e-11 38_[-1]_37 chrIX:210507-210962 4.8e-11 23_[-1]_52 chrIX:183039-183874 4.8e-11 39_[+1]_36 chrII:197204-197884 4.8e-11 42_[-1]_33 chrXV:980469-981058 7.5e-11 43_[-1]_32 chrXV:226358-226933 7.5e-11 21_[+1]_54 chrXIV:546936-547437 7.5e-11 29_[-1]_46 chrXII:92282-92929 7.5e-11 64_[-1]_11 chrX:531543-532186 7.5e-11 53_[-1]_22 chrVIII:388652-389215 7.5e-11 15_[+1]_60 chrVII:845396-845946 7.5e-11 67_[-1]_8 chrXVI:856750-857121 2.7e-10 58_[-1]_17 chrXIII:320959-321326 2.7e-10 60_[+1]_15 chrXII:656710-657215 2.7e-10 27_[+1]_48 chrVII:774127-774646 2.7e-10 54_[-1]_21 chrIV:410186-410702 2.7e-10 26_[-1]_49 chrIX:197364-197979 3.5e-10 11_[-1]_64 chrIV:1016943-1017534 3.5e-10 24_[+1]_51 chrIV:488467-489188 4.6e-10 25_[+1]_50 chrXIII:131401-132301 5.2e-10 29_[+1]_46 chrXI:162282-162738 5.2e-10 32_[+1]_43 chrX:355136-355737 5.2e-10 28_[-1]_47 chrVII:779384-779945 5.2e-10 42_[-1]_33 chrVII:736176-736551 5.2e-10 67_[-1]_8 chrVII:405268-405801 5.2e-10 26_[-1]_49 chrXI:202819-203314 1.1e-09 24_[-1]_51 chrX:414747-415277 1.1e-09 45_[-1]_30 chrVII:876157-876754 1.1e-09 30_[-1]_45 chrVII:122007-122683 1.1e-09 15_[-1]_60 chrV:135100-135714 1.1e-09 73_[+1]_2 chrXII:604910-605672 1.6e-09 64_[+1]_11 chrIII:168035-168610 2.2e-09 34_[+1]_41 chrXV:113498-114195 2.5e-09 47_[-1]_28 chrX:58707-59499 2.5e-09 52_[+1]_23 chrIX:325498-326144 2.5e-09 18_[-1]_57 chrIV:433944-434557 2.5e-09 69_[+1]_6 chrXV:438443-439032 2.8e-09 20_[-1]_55 chrXI:578716-579436 2.8e-09 3_[-1]_72 chrXV:340088-340609 3.8e-09 6_[+1]_69 chrXII:374197-374605 3.8e-09 45_[-1]_30 chrV:492202-492578 3.8e-09 17_[+1]_58 chrIV:619651-620250 3.8e-09 74_[+1]_1 chrVII:541635-542221 4.2e-09 12_[-1]_63 chrV:487102-487648 4.2e-09 11_[+1]_64 chrV:176824-177527 4.2e-09 14_[-1]_61 chrXIV:632375-632913 1.3e-08 47_[-1]_28 chrXIV:102490-102992 1.3e-08 67_[-1]_8 chrXII:975753-976270 1.3e-08 27_[+1]_48 chrXI:74361-74990 1.3e-08 41_[-1]_34 chrVII:730914-731469 1.3e-08 38_[-1]_37 chrVI:137200-137818 1.3e-08 32_[+1]_43 chrXVI:622238-622867 1.7e-08 43_[+1]_32 chrXVI:559992-560504 1.7e-08 5_[+1]_70 chrVIII:358167-358799 1.7e-08 50_[+1]_25 chrVI:157636-158270 1.7e-08 18_[+1]_57 chrX:422677-423295 2e-08 42_[-1]_33 chrX:390795-391328 2e-08 37_[+1]_38 chrXVI:55815-56531 2.6e-08 51_[+1]_24 chrVII:287048-287687 2.6e-08 38_[+1]_37 chrXVI:744031-744643 3.1e-08 37_[-1]_38 chrXII:167664-168308 4e-08 13_[+1]_62 chrVIII:132754-133367 4e-08 21_[+1]_54 chrIV:980675-981275 4e-08 54_[+1]_21 chrIV:437528-438199 4e-08 9_[-1]_66 chrI:182326-182797 4e-08 16_[+1]_59 chrVII:706882-707354 6e-08 45_[+1]_30 chrXVI:338581-339166 1.4e-07 30_[+1]_45 chrXV:710006-710531 1.4e-07 23_[-1]_52 chrXIV:725879-726413 1.7e-07 43_[+1]_32 chrII:347398-347966 1.7e-07 23_[-1]_52 chrII:9367-9877 1.7e-07 63_[-1]_12 chrXII:426889-427524 2.2e-07 16_[-1]_59 chrX:541319-541770 2.2e-07 54_[-1]_21 chrX:204480-205051 2.2e-07 60_[-1]_15 chrIV:568674-569317 2.2e-07 59_[-1]_16 chrXI:313154-313703 2.5e-07 28_[+1]_47 chrVII:110381-110938 2.5e-07 21_[+1]_54 chrV:434390-434781 2.5e-07 11_[+1]_64 chrV:207111-207680 2.5e-07 52_[-1]_23 chrV:288156-288814 2.9e-07 13_[+1]_62 chrVI:191289-191821 6.5e-07 13_[+1]_62 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MDMBSGGRATCGAACCSVKGAYCTY MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF MDMBSGGRATCGAACCSVKGAYCTY width=25 seqs=101 chrXIV:631522-632143 ( 70) AGCCGGGACTCGAACCCGGGACCTC 1 chrIII:123360-123827 ( 40) AGCCGGGACTCGAACCCGGGACCTC 1 chrXV:853977-854463 ( 23) CAACCGGAATCGAACCGATGACCTC 1 chrXII:214619-215175 ( 42) CAACCGGAATCGAACCGATGACCTC 1 chrV:311780-312304 ( 37) CAACCGGAATCGAACCGATGACCTC 1 chrI:166039-166571 ( 54) CAACCGGAATCGAACCGATGACCTC 1 chrXV:663513-664166 ( 29) CGCCCAGGATCGAACTGGGGACGTT 1 chrXIII:586371-586918 ( 48) CGCCCAGGATCGAACTGGGGACGTT 1 chrXIII:420312-420861 ( 58) CGCCCAGGATCGAACTGGGGACGTT 1 chrXIII:372179-372732 ( 46) CGCCCAGGATCGAACTGGGGACGTT 1 chrXI:307873-308453 ( 37) CGCCCAGGATCGAACTGGGGACGTT 1 chrVIII:85050-85563 ( 48) CGCCCAGGATCGAACTGGGGACGTT 1 chrVII:411975-412587 ( 69) CGCCCAGGATCGAACTGGGGACGTT 1 chrV:469232-469727 ( 71) CGCCCAGGATCGAACTGGGGACGTT 1 chrIV:1256776-1257296 ( 28) AGCCGGGAATCGAACCCGGGCCCCA 1 chrVIII:475479-475909 ( 68) AACCGAGGATCGAACTCGGGACCTT 1 chrIV:1075090-1075937 ( 15) AACCGAGGATCGAACTCGGGACCTT 1 chrXVI:880055-880589 ( 30) CTAGCGGGATCGAACCGCTGATCCC 1 chrXVI:819328-819852 ( 32) CTAGCGGGATCGAACCGCTGATCCC 1 chrXIV:569599-570158 ( 45) CTAGCGGGATCGAACCGCTGATCCC 1 chrXII:734701-735012 ( 39) CTAGCGGGATCGAACCGCTGATCCC 1 chrIX:210507-210962 ( 24) CTAGCGGGATCGAACCGCTGATCCC 1 chrIX:183039-183874 ( 40) CTAGCGGGATCGAACCGCTGATCCC 1 chrII:197204-197884 ( 43) CTAGCGGGATCGAACCGCTGATCCC 1 chrXV:980469-981058 ( 44) AGCTGGGAATTGAACCCAGGGCCTC 1 chrXV:226358-226933 ( 22) AGCCCGGAATCGAACCGGGGGCCCA 1 chrXIV:546936-547437 ( 30) AGCTGGGAATTGAACCCAGGGCCTC 1 chrXII:92282-92929 ( 65) AGCTGGGAATTGAACCCAGGGCCTC 1 chrX:531543-532186 ( 54) AGCCCGGAATCGAACCGGGGGCCCA 1 chrVIII:388652-389215 ( 16) AGCTGGGAATTGAACCCAGGGCCTC 1 chrVII:845396-845946 ( 68) AGCCCGGAATCGAACCGGGGGCCCA 1 chrXVI:856750-857121 ( 59) AGTCCGGAATCGAACCGGAGACCTC 1 chrXIII:320959-321326 ( 61) AGTCCGGAATCGAACCGGAGACCTC 1 chrXII:656710-657215 ( 28) AGTCCGGAATCGAACCGGAGACCTC 1 chrVII:774127-774646 ( 55) AGTCCGGAATCGAACCGGAGACCTC 1 chrIV:410186-410702 ( 27) AGTCCGGAATCGAACCGGAGACCTC 1 chrIX:197364-197979 ( 12) AGCGGGGAGTCGAACCCCGGTCTCC 1 chrIV:1016943-1017534 ( 25) AGCGGGGAGTCGAACCCCGGTCTCC 1 chrIV:488467-489188 ( 26) AACCGAGGTTCGAACTCGGGATCTT 1 chrXIII:131401-132301 ( 30) CGATGGGGGTCGAACCCATAATCTT 1 chrXI:162282-162738 ( 33) CGATGGGGGTCGAACCCATAATCTT 1 chrX:355136-355737 ( 29) CGATGGGGGTCGAACCCATAATCTT 1 chrVII:779384-779945 ( 43) GTACGAGAATCGAACCCGTGTCCCC 1 chrVII:736176-736551 ( 68) CGATGGGGGTCGAACCCATAATCTT 1 chrVII:405268-405801 ( 27) CGATGGGGGTCGAACCCATAATCTT 1 chrXI:202819-203314 ( 25) GTAGGGGGCTCGAACCCCTAACCTT 1 chrX:414747-415277 ( 46) GTAGGGGGCTCGAACCCCTAACCTT 1 chrVII:876157-876754 ( 31) GTAGGGGGCTCGAACCCCTAACCTT 1 chrVII:122007-122683 ( 16) GTAGGGGGCTCGAACCCCTAACCTT 1 chrV:135100-135714 ( 74) GTAGGGGGCTCGAACCCCTAACCTT 1 chrXII:604910-605672 ( 65) AGGTGGGGATTGAACCCACGACGGT 1 chrIII:168035-168610 ( 35) TACCCGGATTCGAACCGGGGTTGTC 1 chrXV:113498-114195 ( 48) CAATCGGATTTGAACCGATGATCTC 1 chrX:58707-59499 ( 53) CAATCGGATTTGAACCGATGATCTC 1 chrIX:325498-326144 ( 19) CAATCGGATTTGAACCGATGATCTC 1 chrIV:433944-434557 ( 70) CAATCGGATTTGAACCGATGATCTC 1 chrXV:438443-439032 ( 21) ATAGGGGGCTCGAACCCCTGACATT 1 chrXI:578716-579436 ( 4) ATAGGGGGCTCGAACCCCTGACATT 1 chrXV:340088-340609 ( 7) CGCCAGGACTTGAACCTGGAATCTT 1 chrXII:374197-374605 ( 46) CGCCAGGACTTGAACCTGGAATCTT 1 chrV:492202-492578 ( 18) CGCCAGGACTTGAACCTGGAATCTT 1 chrIV:619651-620250 ( 75) CGCCAGGACTTGAACCTGGAATCTT 1 chrVII:541635-542221 ( 13) TACGGGGAGTCGAACCCCGGTCTCC 1 chrV:487102-487648 ( 12) TACGGGGAGTCGAACCCCGGTCTCC 1 chrV:176824-177527 ( 15) TACGGGGAGTCGAACCCCGGTCTCC 1 chrXIV:632375-632913 ( 48) CAGTGAGGGTTGAACTCACGATCTT 1 chrXIV:102490-102992 ( 68) CAGTGAGGGTTGAACTCACGATCTT 1 chrXII:975753-976270 ( 28) CAGTGAGGGTTGAACTCACGATCTT 1 chrXI:74361-74990 ( 42) CAGTGAGGGTTGAACTCACGATCTT 1 chrVII:730914-731469 ( 39) CAGTGAGGGTTGAACTCACGATCTT 1 chrVI:137200-137818 ( 33) CAGTGAGGGTTGAACTCACGATCTT 1 chrXVI:622238-622867 ( 44) TTCTGTGGATCGAACACAGGACCTC 1 chrXVI:559992-560504 ( 6) TTCTGTGGATCGAACACAGGACCTC 1 chrVIII:358167-358799 ( 51) TTCTGTGGATCGAACACAGGACCTC 1 chrVI:157636-158270 ( 19) TTCTGTGGATCGAACACAGGACCTC 1 chrX:422677-423295 ( 43) AGGGGAGGTTCGAACTCTCGACCTT 1 chrX:390795-391328 ( 38) AGGGGAGGTTCGAACTCTCGACCTT 1 chrXVI:55815-56531 ( 52) GGACAGGAATTGAACCTGCAACCCT 1 chrVII:287048-287687 ( 39) GGACAGGAATTGAACCTGCAACCCT 1 chrXVI:744031-744643 ( 38) CTGTCAGAATTGAACTAACGACCTT 1 chrXII:167664-168308 ( 14) CTGCAGGACTCGAACCTGCGCGGGC 1 chrVIII:132754-133367 ( 22) CTGCAGGACTCGAACCTGCGCGGGC 1 chrIV:980675-981275 ( 55) CTGCAGGACTCGAACCTGCGCGGGC 1 chrIV:437528-438199 ( 10) CTGCAGGACTCGAACCTGCGCGGGC 1 chrI:182326-182797 ( 17) CTGCAGGACTCGAACCTGCGCGGGC 1 chrVII:706882-707354 ( 46) CACTCAGGATCGAACTAAGGACCAA 1 chrXVI:338581-339166 ( 31) CGCTCGGTTTCGATCCGAGGACATC 1 chrXV:710006-710531 ( 24) CGCTCGGTTTCGATCCGAGGACATC 1 chrXIV:725879-726413 ( 44) ATGCGAGGTTCGAACTCGCGCGGAC 1 chrII:347398-347966 ( 24) ATGCGAGGTTCGAACTCGCGCGGAC 1 chrII:9367-9877 ( 64) ATGCGAGGTTCGAACTCGCGCGGAC 1 chrXII:426889-427524 ( 17) GACGGGGAATTGAACCCCGATCTGG 1 chrX:541319-541770 ( 55) GACGGGGAATTGAACCCCGATCTGG 1 chrX:204480-205051 ( 61) GACGGGGAATTGAACCCCGATCTGG 1 chrIV:568674-569317 ( 60) GACGGGGAATTGAACCCCGATCTGG 1 chrXI:313154-313703 ( 29) CTCCTAGAATCGAACCAGGGTTTCA 1 chrVII:110381-110938 ( 22) CTCCTAGAATCGAACCAGGGTTTCA 1 chrV:434390-434781 ( 12) CTCCTAGAATCGAACCAGGGTTTCA 1 chrV:207111-207680 ( 53) CTCCTAGAATCGAACCAGGGTTTCA 1 chrV:288156-288814 ( 14) CAGCAGGATTTGAACCAGCGCGGGC 1 chrVI:191289-191821 ( 14) AGACAGGATTCGAACCTGCGCAGGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MDMBSGGRATCGAACCSVKGAYCTY MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 25 n= 41268 bayes= 10.2872 E= 8.7e-375 -12 146 -66 -198 -23 -1330 115 2 -3 128 1 -266 -1330 134 40 -17 -128 93 134 -298 -12 -1330 185 -298 -1330 -1330 242 -1330 72 -1330 131 -398 72 -7 -24 -107 -1330 -1330 -1330 168 -1330 197 -1330 -23 -1330 -1330 242 -1330 168 -1330 -1330 -1330 165 -1330 -1330 -398 -1330 242 -1330 -1330 -298 195 -1330 -40 -217 134 85 -140 2 28 122 -398 -266 22 128 -17 -66 -1330 210 -1330 111 -78 -143 -107 -498 164 -107 2 -298 176 8 -128 -298 28 -66 97 -181 134 -224 34 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MDMBSGGRATCGAACCSVKGAYCTY MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 25 nsites= 101 E= 8.7e-375 0.287129 0.514851 0.118812 0.079208 0.267327 0.000000 0.415842 0.316832 0.306931 0.455446 0.188119 0.049505 0.000000 0.475248 0.247525 0.277228 0.128713 0.356436 0.475248 0.039604 0.287129 0.000000 0.673267 0.039604 0.000000 0.000000 1.000000 0.000000 0.514851 0.000000 0.465347 0.019802 0.514851 0.178218 0.158416 0.148515 0.000000 0.000000 0.000000 1.000000 0.000000 0.732673 0.000000 0.267327 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.980198 0.000000 0.000000 0.019802 0.000000 1.000000 0.000000 0.000000 0.039604 0.722772 0.000000 0.237624 0.069307 0.475248 0.336634 0.118812 0.316832 0.227723 0.435644 0.019802 0.049505 0.217822 0.455446 0.277228 0.198020 0.000000 0.801980 0.000000 0.673267 0.108911 0.069307 0.148515 0.009901 0.584158 0.089109 0.316832 0.039604 0.633663 0.198020 0.128713 0.039604 0.227723 0.118812 0.613861 0.089109 0.475248 0.039604 0.396040 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MDMBSGGRATCGAACCSVKGAYCTY MEME-1 regular expression -------------------------------------------------------------------------------- [CA][GTA][CA][CTG][GC][GA]G[AG]AT[CT]GAAC[CT][CG][GAC][GTC]GA[CT]C[TC][CT] -------------------------------------------------------------------------------- Time 286.72 secs. ******************************************************************************** ******************************************************************************** MOTIF GSBYNBDTGGYYYAGTGGKTARAGSSN MEME-2 width = 27 sites = 101 llr = 1606 E-value = 2.1e-286 ******************************************************************************** -------------------------------------------------------------------------------- Motif GSBYNBDTGGYYYAGTGGKTARAGSSN MEME-2 Description -------------------------------------------------------------------------------- Simplified A :1:1222:3:::1a2::::27552::3 pos.-specific C 144424::::653::12::2:121544 probability G 8431224:7a:21:8:6a4::326342 matrix T 1133324a::434::92:563111112 bits 2.4 * 2.2 * * 1.9 * * 1.7 * * ** * Relative 1.5 * *** *** * Entropy 1.2 * **** *** * (22.9 bits) 1.0 * **** *** * 0.7 ** **** ****** *** 0.5 *** ***** ****** * *** 0.2 **** ********************** 0.0 --------------------------- Multilevel GCCCTCGTGGCCTAGTGGTTAAAGCGC consensus GTTATT A TTC T G TGGAGCA sequence G C A G G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNBDTGGYYYAGTGGKTARAGSSN MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------------- chrXVI:856750-857121 + 17 2.63e-12 AACAAGATTC GGGCGTGTGGCGTAGTCGGTAGCGCGC TCCCTTAGCA chrXII:656710-657215 - 68 2.63e-12 AAAATT GGGCGTGTGGCGTAGTCGGTAGCGCGC TCCCTTAGCA chrX:197158-197618 - 21 2.63e-12 AATAATATTA GGGCGTGTGGCGTAGTCGGTAGCGCGC TCCCTTAGCA chrVII:774127-774646 + 13 2.63e-12 TCAATTAATT GGGCGTGTGGCGTAGTCGGTAGCGCGC TCCCTTAGCA chrVI:204778-205207 - 28 2.63e-12 ACAAACGTTC GGGCGTGTGGCGTAGTCGGTAGCGCGC TCCCTTAGCA chrXV:853977-854463 - 63 6.31e-12 ACAGTCATCA GGGCACATGGCGCAGTTGGTAGCGCGC TTCCCTTGCA chrI:166039-166571 + 12 6.31e-12 GTAATGAGTT GGGCACATGGCGCAGTTGGTAGCGCGC TTCCCTTGCA chrXIII:258994-259525 - 4 3.08e-11 AAGTTAGTAT GGCAACTTGGCCGAGTGGTTAAGGCGA AAG chrXII:167664-168308 - 63 3.08e-11 ATAGTCATAT GGCAACTTGGCCGAGTGGTTAAGGCGA AAGATTAGAA chrVIII:132754-133367 - 71 3.08e-11 AGT GGCAACTTGGCCGAGTGGTTAAGGCGA AAGATTAGAA chrI:182326-182797 - 66 3.08e-11 ACAATTTT GGCAACTTGGCCGAGTGGTTAAGGCGA AAGATTAGAA chrXVI:880055-880589 - 71 3.71e-11 AAT GGTCTCTTGGCCCAGTTGGTTAAGGCA CCGTGCTAAT chrXIV:602097-602549 + 39 3.71e-11 AGATAACAAT GGTCTCTTGGCCCAGTTGGTTAAGGCA CCGTGCTAAT chrXII:1051903-1052428 - 3 3.71e-11 TCCTTTTCAT GGTCTCTTGGCCCAGTTGGTTAAGGCA CC chrV:443010-443510 - 39 3.71e-11 ATTAAAATTT GGTCTCTTGGCCCAGTTGGTTAAGGCA CCGTGCTAAT chrXV:274262-275073 + 56 7.58e-11 AAGTAATCGT GTCCCAGTGGCCGAGTGGTTAAGGCGA TGCCCTGCTA chrXII:784116-784573 + 60 7.58e-11 TTGTTCAACC GTCCCAGTGGCCGAGTGGTTAAGGCGA TGCCTGCTAT chrV:288156-288814 - 63 1.49e-10 CATAATGATA GGCACTATGGCCGAGTGGTTAAGGCGA CAGACTTGAA chrXV:353878-354338 - 29 3.32e-10 ACGGTTTACT GCTTCTATGGCCAAGTTGGTAAGGCGC CACACTAGTA chrXV:113498-114195 + 6 3.32e-10 ATTTA GCTTCTATGGCCAAGTTGGTAAGGCGC CACACTAGTA chrVIII:115911-116438 - 29 3.32e-10 CACTATTAGA GCTTCTATGGCCAAGTTGGTAAGGCGC CACACTAGTA chrIX:174787-175248 + 64 3.32e-10 ACAAGTACGA GCTTCTATGGCCAAGTTGGTAAGGCGC CACACTAGTA chrXII:731902-732268 + 55 3.87e-10 AACATACAAT GGGAGTTTGGCCGAGTGGTTTAAGGCG TCAGATTTAG chrXV:663513-664166 - 70 1.25e-09 TAGT GGTTTCGTGGTCTAGTCGGTTATGGCA TCTGCTTAAC chrXII:687662-688173 - 39 1.25e-09 ATAAATAATA GGTTTCGTGGTCTAGTCGGTTATGGCA TCTGCTTAAC chrXI:379440-379919 + 51 1.25e-09 CAGATTAATA GGTTTCGTGGTCTAGTCGGTTATGGCA TCTGCTTAAC chrX:378106-378586 + 64 1.25e-09 TAAATTAATA GGTTTCGTGGTCTAGTCGGTTATGGCA TCTGCTTAAC chrVII:823263-823716 + 43 1.25e-09 CAATAAGAGT GGTTTCGTGGTCTAGTCGGTTATGGCA TCTGCTTAAC chrV:469232-469727 + 28 1.25e-09 AGAAATAATT GGTTTCGTGGTCTAGTCGGTTATGGCA TCTGCTTAAC chrV:438383-438975 + 71 1.25e-09 CAACAAATTA GGTTTCGTGGTCTAGTCGGTTATGGCA TCT chrXVI:581816-582310 + 49 1.43e-09 CAACAAAAGA GCCTTGTTGGCGCAATCGGTAGCGCGT ATGACTCTTA chrX:414747-415277 + 4 1.43e-09 TTA GCCTTGTTGGCGCAATCGGTAGCGCGT ATGACTCTTA chrVII:185470-186136 - 7 1.43e-09 CAACGAAATA GCCTTGTTGGCGCAATCGGTAGCGCGT ATGACT chrVI:226536-226966 - 33 1.43e-09 AGATTAAAAT GCCTTGTTGGCGCAATCGGTAGCGCGT ATGACTCTTA chrIV:1352311-1352764 - 25 1.43e-09 CAACGAAATA GCCTTGTTGGCGCAATCGGTAGCGCGT ATGACTCTTA chrIV:1095131-1095746 - 47 5.28e-09 TCTTATGTTA GCGGACTTAGCTCAGTTGGGAGAGCGC CAGACTGAAG chrXVI:810469-810879 + 52 7.60e-09 CATTATTTGC GACTCCATGGCCAAGTTGGTTAAGGCG TGCGACTGTT chrXV:228055-228638 + 35 7.60e-09 TAAAATATTA GACTCCATGGCCAAGTTGGTTAAGGCG TGCGACTGTT chrXIV:632375-632913 + 5 7.60e-09 AAGT GACTCCATGGCCAAGTTGGTTAAGGCG TGCGACTGTT chrXIV:442735-443253 + 62 7.60e-09 ACAAATAAGT GGTTGTTTGGCCGAGCGGTCTAAGGCG CCTGATTCAA chrXIV:102490-102992 + 25 7.60e-09 TATATTATAA GACTCCATGGCCAAGTTGGTTAAGGCG TGCGACTGTT chrXII:975753-976270 - 69 7.60e-09 TAAAA GACTCCATGGCCAAGTTGGTTAAGGCG TGCGACTGTT chrVII:857200-857688 - 71 7.60e-09 AGT GGTTGTTTGGCCGAGCGGTCTAAGGCG CCTGATTCAA chrVII:205297-205819 + 13 7.60e-09 ACAAATAAGT GGTTGTTTGGCCGAGCGGTCTAAGGCG CCTGATTCAA chrIII:127516-127886 + 65 7.60e-09 AAGATAAAAT GACTCCATGGCCAAGTTGGTTAAGGCG TGCGACTGT chrXVI:860112-860662 + 42 1.08e-08 TAAATAACAA GCGCAAGTGGTTTAGTGGTAAAATCCA ACGTTGCCAT chrXV:226358-226933 - 60 1.08e-08 AAGAAATTCA GCGCAAGTGGTTTAGTGGTAAAATCCA ACGTTGCCAT chrXIII:183770-184198 - 8 1.08e-08 AATAAAGATC GCGCAAGTGGTTTAGTGGTAAAATCCA ACGTTGC chrX:531543-532186 + 14 1.08e-08 CAATTAGTGA GCGCAAGTGGTTTAGTGGTAAAATCCA ACGTTGCCAT chrX:396543-397036 - 31 1.08e-08 TCAAAAGTAA GCGCAAGTGGTTTAGTGGTAAAATCCA ACGTTGCCAT chrVII:930779-931255 - 30 1.08e-08 TAATCAGTAA GCGCAAGTGGTTTAGTGGTAAAATCCA ACGTTGCCAT chrVII:845396-845946 + 28 1.08e-08 TAAATAACAA GCGCAAGTGGTTTAGTGGTAAAATCCA ACGTTGCCAT chrIV:83285-83830 + 41 1.08e-08 AGTTCACTTA GCGCAAGTGGTTTAGTGGTAAAATCCA ACGTTGCCAT chrXVI:559992-560504 - 65 1.53e-08 AGAAATTGA GCGGATTTAGCTCAGTTGGGAGAGCGC CAGACTGAAG chrXIII:352067-352542 + 26 1.53e-08 ATGAATATAA GCGGATTTAGCTCAGTTGGGAGAGCGC CAGACTGAAG chrXII:875191-875625 + 18 1.53e-08 GAAGAACTCA TCCTTGTTAGCTCAGTTGGTAGAGCGT TCGGCTTTTA chrVIII:237690-238152 - 42 1.53e-08 CAAATAGTAA GCGGATTTAGCTCAGTTGGGAGAGCGC CAGACTGAAG chrIV:359348-359842 + 32 1.53e-08 GAAGAACTCA TCCTTGTTAGCTCAGTTGGTAGAGCGT TCGGCTTTTA chrX:424288-424770 - 10 1.91e-08 TAAATAAGAT GGAGGGTTGGCCGAGTGGTCTAAGGCG GCAGACTTA chrII:9367-9877 + 11 1.91e-08 GAAAATTCGT GGAGGGTTGGCCGAGTGGTCTAAGGCG GCAGACTTAA chrXV:300845-301441 + 4 2.64e-08 ATC GGGCGTGTGGTCTAGTGGTATGATTCT CGCTTTGGGC chrVI:101096-101660 + 48 2.64e-08 ACAATAATTC GGGCGTGTGGTCTAGTGGTATGATTCT CGCTTTGGGC chrXV:340088-340609 - 47 2.94e-08 TCAAGATCTG TTCCTCGTGGCCCAATGGTCACGGCGT CTGGCTACGA chrXII:374197-374605 + 4 2.94e-08 TTG TTCCTCGTGGCCCAATGGTCACGGCGT CTGGCTACGA chrX:233673-234202 + 52 2.94e-08 TATATTCTTG TTCCTCGTGGCCCAATGGTCACGGCGT CTGGCTACGA chrV:492202-492578 - 58 2.94e-08 GAACATCCTA TTCCTCGTGGCCCAATGGTCACGGCGT CTGGCTACGA chrXV:110842-111261 - 6 5.44e-08 CAATTAACCC GGGCGGTTAGTGTAGTGGTTATCATCC CACCC chrXIV:96026-96629 - 9 5.44e-08 TCCAACACAT GGGCGGTTAGTGTAGTGGTTATCATCC CACCCTTC chrVII:779384-779945 + 2 5.44e-08 C GGGCGGTTAGTGTAGTGGTTATCATCC CACCCTTCCA chrVII:700102-701257 + 46 5.44e-08 CAGATGAATT GGTACTCTGGCCGAGTGGTCTAAGGCG TCAGGTCGAG chrXV:594205-594664 - 15 6.01e-08 TGATTGAAAC GCGCAAGTGGTTCAGTGGTTAGAATTT ATGCTTCCCA chrIV:488467-489188 - 67 7.31e-08 GGTTTCC GGTCCAATGGTCCAGTGGTTCAAGACG TCGCCTTTAC chrII:326550-327148 - 40 7.31e-08 TCGAGTTCCG GGTCCAATGGTCCAGTGGTTCAAGACG TCGCCTTTAC chrIV:1256776-1257296 - 67 9.74e-08 CTTCTTA GCGAAAGTGGTTCAGTGGTTAGAATTC ATGCTTCCCA chrXV:976179-976675 + 44 1.07e-07 TATTTTGTGC GCTTCAGTAGCTCAGTAGGAAGAGCGT CAGTCTCATA chrIV:1175588-1176075 + 48 1.07e-07 ACAAAACAAA GCTTCAGTAGCTCAGTAGGAAGAGCGT CAGTCTCATA chrXI:46611-47030 - 10 1.54e-07 AAATTACTCA GCCCTTTTGGCCAAGTGGTAAGGCATC GCACTCGTA chrXIII:362834-363328 + 33 3.93e-07 ATCCAAGTTT GCCATCTTAGTATAGTGGTTAGTACAC ATCGTTGTGG chrXI:313154-313703 - 68 3.93e-07 TTGTTT GCCATCTTAGTATAGTGGTTAGTACAC ATCGTTGTGG chrVII:110381-110938 - 61 3.93e-07 ATAATTACCT GCCATCTTAGTATAGTGGTTAGTACAC ATCGTTGTGG chrV:434390-434781 - 51 3.93e-07 TTGAAAAGTC GCCATCTTAGTATAGTGGTTAGTACAC ATCGTTGTGG chrV:207111-207680 + 12 3.93e-07 ATATAAGTTC GCCATCTTAGTATAGTGGTTAGTACAC ATCGTTGTGG chrVIII:134054-134616 + 36 4.61e-07 AGTAAGTTCC GGTCCTATAGTGTAGTGGTTATCACTT TCGGTTTTGA chrXIII:747746-748155 - 37 4.98e-07 CATATGACTA GCTCGCGTGGCGTAATGGCAACGCGTC TGACTTCTAA chrXIII:131401-132301 - 69 4.98e-07 ATTTA GCTCGCGTGGCGTAATGGCAACGCGTC TGACTTCTAA chrXI:162282-162738 - 72 4.98e-07 TA GCTCGCGTGGCGTAATGGCAACGCGTC TGACTTCTAA chrVII:736176-736551 + 27 4.98e-07 AATTTCAATA GCTCGCGTGGCGTAATGGCAACGCGTC TGACTTCTAA chrV:130849-131470 - 18 8.47e-07 ATAATTAAGA GGTTTTATAGTGTAGTGGTTATCACTT TCGGTTTTGA chrXV:287996-288414 + 37 9.11e-07 AAAATAGCTT CTCTCGGTAGCCAAGTTGGTTTAAGGC GCAAGACTGT chrXIII:168590-169048 + 26 9.11e-07 AAAATAGTCA CTCTCGGTAGCCAAGTTGGTTTAAGGC GCAAGACTGT chrX:353986-354527 + 38 9.11e-07 TCATTTATCA CTCTCGGTAGCCAAGTTGGTTTAAGGC GCAAGACTGT chrVII:19-989 + 69 1.13e-06 TCATTATTCA CGGCACTTGCCTCAGCGGTCTATACCC TGTGC chrIV:1524133-1525675 - 3 1.13e-06 TCATTATACA CGGCACTTGCCTCAGCGGTCTATACCC TG chrII:642860-643296 - 24 1.59e-06 GTAATAGAAA GCTCGTATGGCGCAGTGGTAGCGCAGC AGATTGCAAA chrIX:438764-439885 - 26 1.82e-06 TCATTGTGCA CGGTACTTGCCTCAGCGGTCTATACCC TGTGCCATTT chrX:541319-541770 + 14 3.01e-06 AGAAAGAAAA TCCGTGATAGTTTAATGGTCAGAATGG GCGCTTGTCG chrX:355136-355737 + 70 3.01e-06 CTTTGTTTCT TCCGTGATAGTTTAATGGTCAGAATGG GCGC chrX:204480-205051 + 20 3.01e-06 AACATAAAAA TCCGTGATAGTTTAATGGTCAGAATGG GCGCTTGTCG chrIX:324165-324616 - 8 3.01e-06 CATCTAATAT TCCGTGATAGTTTAATGGTCAGAATGG GCGCTTG chrIV:568674-569317 + 19 3.01e-06 CTTTGTTTCT TCCGTGATAGTTTAATGGTCAGAATGG GCGCTTGTCG chrIV:1075090-1075937 - 55 5.36e-06 CCGTAATATT GTTCCAATAGTGTAGCGGCTATCACGT TGCCTTCACA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNBDTGGYYYAGTGGKTARAGSSN MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXVI:856750-857121 2.6e-12 16_[+2]_57 chrXII:656710-657215 2.6e-12 67_[-2]_6 chrX:197158-197618 2.6e-12 20_[-2]_53 chrVII:774127-774646 2.6e-12 12_[+2]_61 chrVI:204778-205207 2.6e-12 27_[-2]_46 chrXV:853977-854463 6.3e-12 62_[-2]_11 chrI:166039-166571 6.3e-12 11_[+2]_62 chrXIII:258994-259525 3.1e-11 3_[-2]_70 chrXII:167664-168308 3.1e-11 62_[-2]_11 chrVIII:132754-133367 3.1e-11 70_[-2]_3 chrI:182326-182797 3.1e-11 65_[-2]_8 chrXVI:880055-880589 3.7e-11 70_[-2]_3 chrXIV:602097-602549 3.7e-11 38_[+2]_35 chrXII:1051903-1052428 3.7e-11 2_[-2]_71 chrV:443010-443510 3.7e-11 38_[-2]_35 chrXV:274262-275073 7.6e-11 55_[+2]_18 chrXII:784116-784573 7.6e-11 59_[+2]_14 chrV:288156-288814 1.5e-10 62_[-2]_11 chrXV:353878-354338 3.3e-10 28_[-2]_45 chrXV:113498-114195 3.3e-10 5_[+2]_68 chrVIII:115911-116438 3.3e-10 28_[-2]_45 chrIX:174787-175248 3.3e-10 63_[+2]_10 chrXII:731902-732268 3.9e-10 54_[+2]_19 chrXV:663513-664166 1.2e-09 69_[-2]_4 chrXII:687662-688173 1.2e-09 38_[-2]_35 chrXI:379440-379919 1.2e-09 50_[+2]_23 chrX:378106-378586 1.2e-09 63_[+2]_10 chrVII:823263-823716 1.2e-09 42_[+2]_31 chrV:469232-469727 1.2e-09 27_[+2]_46 chrV:438383-438975 1.2e-09 70_[+2]_3 chrXVI:581816-582310 1.4e-09 48_[+2]_25 chrX:414747-415277 1.4e-09 3_[+2]_70 chrVII:185470-186136 1.4e-09 6_[-2]_67 chrVI:226536-226966 1.4e-09 32_[-2]_41 chrIV:1352311-1352764 1.4e-09 24_[-2]_49 chrIV:1095131-1095746 5.3e-09 46_[-2]_27 chrXVI:810469-810879 7.6e-09 51_[+2]_22 chrXV:228055-228638 7.6e-09 34_[+2]_39 chrXIV:632375-632913 7.6e-09 4_[+2]_69 chrXIV:442735-443253 7.6e-09 61_[+2]_12 chrXIV:102490-102992 7.6e-09 24_[+2]_49 chrXII:975753-976270 7.6e-09 68_[-2]_5 chrVII:857200-857688 7.6e-09 70_[-2]_3 chrVII:205297-205819 7.6e-09 12_[+2]_61 chrIII:127516-127886 7.6e-09 64_[+2]_9 chrXVI:860112-860662 1.1e-08 41_[+2]_32 chrXV:226358-226933 1.1e-08 59_[-2]_14 chrXIII:183770-184198 1.1e-08 7_[-2]_66 chrX:531543-532186 1.1e-08 13_[+2]_60 chrX:396543-397036 1.1e-08 30_[-2]_43 chrVII:930779-931255 1.1e-08 29_[-2]_44 chrVII:845396-845946 1.1e-08 27_[+2]_46 chrIV:83285-83830 1.1e-08 40_[+2]_33 chrXVI:559992-560504 1.5e-08 64_[-2]_9 chrXIII:352067-352542 1.5e-08 25_[+2]_48 chrXII:875191-875625 1.5e-08 17_[+2]_56 chrVIII:237690-238152 1.5e-08 41_[-2]_32 chrIV:359348-359842 1.5e-08 31_[+2]_42 chrX:424288-424770 1.9e-08 9_[-2]_64 chrII:9367-9877 1.9e-08 10_[+2]_63 chrXV:300845-301441 2.6e-08 3_[+2]_70 chrVI:101096-101660 2.6e-08 47_[+2]_26 chrXV:340088-340609 2.9e-08 46_[-2]_27 chrXII:374197-374605 2.9e-08 3_[+2]_70 chrX:233673-234202 2.9e-08 51_[+2]_22 chrV:492202-492578 2.9e-08 57_[-2]_16 chrXV:110842-111261 5.4e-08 5_[-2]_68 chrXIV:96026-96629 5.4e-08 8_[-2]_65 chrVII:779384-779945 5.4e-08 1_[+2]_72 chrVII:700102-701257 5.4e-08 45_[+2]_28 chrXV:594205-594664 6e-08 14_[-2]_59 chrIV:488467-489188 7.3e-08 66_[-2]_7 chrII:326550-327148 7.3e-08 39_[-2]_34 chrIV:1256776-1257296 9.7e-08 66_[-2]_7 chrXV:976179-976675 1.1e-07 43_[+2]_30 chrIV:1175588-1176075 1.1e-07 47_[+2]_26 chrXI:46611-47030 1.5e-07 9_[-2]_64 chrXIII:362834-363328 3.9e-07 32_[+2]_41 chrXI:313154-313703 3.9e-07 67_[-2]_6 chrVII:110381-110938 3.9e-07 60_[-2]_13 chrV:434390-434781 3.9e-07 50_[-2]_23 chrV:207111-207680 3.9e-07 11_[+2]_62 chrVIII:134054-134616 4.6e-07 35_[+2]_38 chrXIII:747746-748155 5e-07 36_[-2]_37 chrXIII:131401-132301 5e-07 68_[-2]_5 chrXI:162282-162738 5e-07 71_[-2]_2 chrVII:736176-736551 5e-07 26_[+2]_47 chrV:130849-131470 8.5e-07 17_[-2]_56 chrXV:287996-288414 9.1e-07 36_[+2]_37 chrXIII:168590-169048 9.1e-07 25_[+2]_48 chrX:353986-354527 9.1e-07 37_[+2]_36 chrVII:19-989 1.1e-06 68_[+2]_5 chrIV:1524133-1525675 1.1e-06 2_[-2]_71 chrII:642860-643296 1.6e-06 23_[-2]_50 chrIX:438764-439885 1.8e-06 25_[-2]_48 chrX:541319-541770 3e-06 13_[+2]_60 chrX:355136-355737 3e-06 69_[+2]_4 chrX:204480-205051 3e-06 19_[+2]_54 chrIX:324165-324616 3e-06 7_[-2]_66 chrIV:568674-569317 3e-06 18_[+2]_55 chrIV:1075090-1075937 5.4e-06 54_[-2]_19 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNBDTGGYYYAGTGGKTARAGSSN MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GSBYNBDTGGYYYAGTGGKTARAGSSN width=27 seqs=101 chrXVI:856750-857121 ( 17) GGGCGTGTGGCGTAGTCGGTAGCGCGC 1 chrXII:656710-657215 ( 68) GGGCGTGTGGCGTAGTCGGTAGCGCGC 1 chrX:197158-197618 ( 21) GGGCGTGTGGCGTAGTCGGTAGCGCGC 1 chrVII:774127-774646 ( 13) GGGCGTGTGGCGTAGTCGGTAGCGCGC 1 chrVI:204778-205207 ( 28) GGGCGTGTGGCGTAGTCGGTAGCGCGC 1 chrXV:853977-854463 ( 63) GGGCACATGGCGCAGTTGGTAGCGCGC 1 chrI:166039-166571 ( 12) GGGCACATGGCGCAGTTGGTAGCGCGC 1 chrXIII:258994-259525 ( 4) GGCAACTTGGCCGAGTGGTTAAGGCGA 1 chrXII:167664-168308 ( 63) GGCAACTTGGCCGAGTGGTTAAGGCGA 1 chrVIII:132754-133367 ( 71) GGCAACTTGGCCGAGTGGTTAAGGCGA 1 chrI:182326-182797 ( 66) GGCAACTTGGCCGAGTGGTTAAGGCGA 1 chrXVI:880055-880589 ( 71) GGTCTCTTGGCCCAGTTGGTTAAGGCA 1 chrXIV:602097-602549 ( 39) GGTCTCTTGGCCCAGTTGGTTAAGGCA 1 chrXII:1051903-1052428 ( 3) GGTCTCTTGGCCCAGTTGGTTAAGGCA 1 chrV:443010-443510 ( 39) GGTCTCTTGGCCCAGTTGGTTAAGGCA 1 chrXV:274262-275073 ( 56) GTCCCAGTGGCCGAGTGGTTAAGGCGA 1 chrXII:784116-784573 ( 60) GTCCCAGTGGCCGAGTGGTTAAGGCGA 1 chrV:288156-288814 ( 63) GGCACTATGGCCGAGTGGTTAAGGCGA 1 chrXV:353878-354338 ( 29) GCTTCTATGGCCAAGTTGGTAAGGCGC 1 chrXV:113498-114195 ( 6) GCTTCTATGGCCAAGTTGGTAAGGCGC 1 chrVIII:115911-116438 ( 29) GCTTCTATGGCCAAGTTGGTAAGGCGC 1 chrIX:174787-175248 ( 64) GCTTCTATGGCCAAGTTGGTAAGGCGC 1 chrXII:731902-732268 ( 55) GGGAGTTTGGCCGAGTGGTTTAAGGCG 1 chrXV:663513-664166 ( 70) GGTTTCGTGGTCTAGTCGGTTATGGCA 1 chrXII:687662-688173 ( 39) GGTTTCGTGGTCTAGTCGGTTATGGCA 1 chrXI:379440-379919 ( 51) GGTTTCGTGGTCTAGTCGGTTATGGCA 1 chrX:378106-378586 ( 64) GGTTTCGTGGTCTAGTCGGTTATGGCA 1 chrVII:823263-823716 ( 43) GGTTTCGTGGTCTAGTCGGTTATGGCA 1 chrV:469232-469727 ( 28) GGTTTCGTGGTCTAGTCGGTTATGGCA 1 chrV:438383-438975 ( 71) GGTTTCGTGGTCTAGTCGGTTATGGCA 1 chrXVI:581816-582310 ( 49) GCCTTGTTGGCGCAATCGGTAGCGCGT 1 chrX:414747-415277 ( 4) GCCTTGTTGGCGCAATCGGTAGCGCGT 1 chrVII:185470-186136 ( 7) GCCTTGTTGGCGCAATCGGTAGCGCGT 1 chrVI:226536-226966 ( 33) GCCTTGTTGGCGCAATCGGTAGCGCGT 1 chrIV:1352311-1352764 ( 25) GCCTTGTTGGCGCAATCGGTAGCGCGT 1 chrIV:1095131-1095746 ( 47) GCGGACTTAGCTCAGTTGGGAGAGCGC 1 chrXVI:810469-810879 ( 52) GACTCCATGGCCAAGTTGGTTAAGGCG 1 chrXV:228055-228638 ( 35) GACTCCATGGCCAAGTTGGTTAAGGCG 1 chrXIV:632375-632913 ( 5) GACTCCATGGCCAAGTTGGTTAAGGCG 1 chrXIV:442735-443253 ( 62) GGTTGTTTGGCCGAGCGGTCTAAGGCG 1 chrXIV:102490-102992 ( 25) GACTCCATGGCCAAGTTGGTTAAGGCG 1 chrXII:975753-976270 ( 69) GACTCCATGGCCAAGTTGGTTAAGGCG 1 chrVII:857200-857688 ( 71) GGTTGTTTGGCCGAGCGGTCTAAGGCG 1 chrVII:205297-205819 ( 13) GGTTGTTTGGCCGAGCGGTCTAAGGCG 1 chrIII:127516-127886 ( 65) GACTCCATGGCCAAGTTGGTTAAGGCG 1 chrXVI:860112-860662 ( 42) GCGCAAGTGGTTTAGTGGTAAAATCCA 1 chrXV:226358-226933 ( 60) GCGCAAGTGGTTTAGTGGTAAAATCCA 1 chrXIII:183770-184198 ( 8) GCGCAAGTGGTTTAGTGGTAAAATCCA 1 chrX:531543-532186 ( 14) GCGCAAGTGGTTTAGTGGTAAAATCCA 1 chrX:396543-397036 ( 31) GCGCAAGTGGTTTAGTGGTAAAATCCA 1 chrVII:930779-931255 ( 30) GCGCAAGTGGTTTAGTGGTAAAATCCA 1 chrVII:845396-845946 ( 28) GCGCAAGTGGTTTAGTGGTAAAATCCA 1 chrIV:83285-83830 ( 41) GCGCAAGTGGTTTAGTGGTAAAATCCA 1 chrXVI:559992-560504 ( 65) GCGGATTTAGCTCAGTTGGGAGAGCGC 1 chrXIII:352067-352542 ( 26) GCGGATTTAGCTCAGTTGGGAGAGCGC 1 chrXII:875191-875625 ( 18) TCCTTGTTAGCTCAGTTGGTAGAGCGT 1 chrVIII:237690-238152 ( 42) GCGGATTTAGCTCAGTTGGGAGAGCGC 1 chrIV:359348-359842 ( 32) TCCTTGTTAGCTCAGTTGGTAGAGCGT 1 chrX:424288-424770 ( 10) GGAGGGTTGGCCGAGTGGTCTAAGGCG 1 chrII:9367-9877 ( 11) GGAGGGTTGGCCGAGTGGTCTAAGGCG 1 chrXV:300845-301441 ( 4) GGGCGTGTGGTCTAGTGGTATGATTCT 1 chrVI:101096-101660 ( 48) GGGCGTGTGGTCTAGTGGTATGATTCT 1 chrXV:340088-340609 ( 47) TTCCTCGTGGCCCAATGGTCACGGCGT 1 chrXII:374197-374605 ( 4) TTCCTCGTGGCCCAATGGTCACGGCGT 1 chrX:233673-234202 ( 52) TTCCTCGTGGCCCAATGGTCACGGCGT 1 chrV:492202-492578 ( 58) TTCCTCGTGGCCCAATGGTCACGGCGT 1 chrXV:110842-111261 ( 6) GGGCGGTTAGTGTAGTGGTTATCATCC 1 chrXIV:96026-96629 ( 9) GGGCGGTTAGTGTAGTGGTTATCATCC 1 chrVII:779384-779945 ( 2) GGGCGGTTAGTGTAGTGGTTATCATCC 1 chrVII:700102-701257 ( 46) GGTACTCTGGCCGAGTGGTCTAAGGCG 1 chrXV:594205-594664 ( 15) GCGCAAGTGGTTCAGTGGTTAGAATTT 1 chrIV:488467-489188 ( 67) GGTCCAATGGTCCAGTGGTTCAAGACG 1 chrII:326550-327148 ( 40) GGTCCAATGGTCCAGTGGTTCAAGACG 1 chrIV:1256776-1257296 ( 67) GCGAAAGTGGTTCAGTGGTTAGAATTC 1 chrXV:976179-976675 ( 44) GCTTCAGTAGCTCAGTAGGAAGAGCGT 1 chrIV:1175588-1176075 ( 48) GCTTCAGTAGCTCAGTAGGAAGAGCGT 1 chrXI:46611-47030 ( 10) GCCCTTTTGGCCAAGTGGTAAGGCATC 1 chrXIII:362834-363328 ( 33) GCCATCTTAGTATAGTGGTTAGTACAC 1 chrXI:313154-313703 ( 68) GCCATCTTAGTATAGTGGTTAGTACAC 1 chrVII:110381-110938 ( 61) GCCATCTTAGTATAGTGGTTAGTACAC 1 chrV:434390-434781 ( 51) GCCATCTTAGTATAGTGGTTAGTACAC 1 chrV:207111-207680 ( 12) GCCATCTTAGTATAGTGGTTAGTACAC 1 chrVIII:134054-134616 ( 36) GGTCCTATAGTGTAGTGGTTATCACTT 1 chrXIII:747746-748155 ( 37) GCTCGCGTGGCGTAATGGCAACGCGTC 1 chrXIII:131401-132301 ( 69) GCTCGCGTGGCGTAATGGCAACGCGTC 1 chrXI:162282-162738 ( 72) GCTCGCGTGGCGTAATGGCAACGCGTC 1 chrVII:736176-736551 ( 27) GCTCGCGTGGCGTAATGGCAACGCGTC 1 chrV:130849-131470 ( 18) GGTTTTATAGTGTAGTGGTTATCACTT 1 chrXV:287996-288414 ( 37) CTCTCGGTAGCCAAGTTGGTTTAAGGC 1 chrXIII:168590-169048 ( 26) CTCTCGGTAGCCAAGTTGGTTTAAGGC 1 chrX:353986-354527 ( 38) CTCTCGGTAGCCAAGTTGGTTTAAGGC 1 chrVII:19-989 ( 69) CGGCACTTGCCTCAGCGGTCTATACCC 1 chrIV:1524133-1525675 ( 3) CGGCACTTGCCTCAGCGGTCTATACCC 1 chrII:642860-643296 ( 24) GCTCGTATGGCGCAGTGGTAGCGCAGC 1 chrIX:438764-439885 ( 26) CGGTACTTGCCTCAGCGGTCTATACCC 1 chrX:541319-541770 ( 14) TCCGTGATAGTTTAATGGTCAGAATGG 1 chrX:355136-355737 ( 70) TCCGTGATAGTTTAATGGTCAGAATGG 1 chrX:204480-205051 ( 20) TCCGTGATAGTTTAATGGTCAGAATGG 1 chrIX:324165-324616 ( 8) TCCGTGATAGTTTAATGGTCAGAATGG 1 chrIV:568674-569317 ( 19) TCCGTGATAGTTTAATGGTCAGAATGG 1 chrIV:1075090-1075937 ( 55) GTTCCAATAGTGTAGCGGCTATCACGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNBDTGGYYYAGTGGKTARAGSSN MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 27 n= 40182 bayes= 8.35204 E= 2.1e-286 -1330 -165 215 -152 -240 119 115 -166 -398 101 67 -3 -128 119 -78 11 -46 28 15 11 -89 108 8 -40 -40 -424 105 23 -1330 -1330 -1330 168 -23 -1330 197 -1330 -1330 -265 237 -1330 -1330 176 -1330 23 -266 131 28 -28 -117 71 -43 41 168 -1330 -1330 -1330 -81 -1330 213 -1330 -1330 -143 -1330 157 -398 -15 159 -34 -1330 -1330 242 -1330 -1330 -192 122 72 -81 -7 -224 95 106 -324 -424 2 60 -107 89 -181 57 -7 15 -107 -40 -165 169 -166 -298 151 71 -140 -266 115 125 -181 -28 93 8 -73 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNBDTGGYYYAGTGGKTARAGSSN MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 27 nsites= 101 E= 2.1e-286 0.000000 0.059406 0.831683 0.108911 0.059406 0.425743 0.415842 0.099010 0.019802 0.376238 0.297030 0.306931 0.128713 0.425743 0.108911 0.336634 0.227723 0.227723 0.207921 0.336634 0.168317 0.396040 0.198020 0.237624 0.237624 0.009901 0.386139 0.366337 0.000000 0.000000 0.000000 1.000000 0.267327 0.000000 0.732673 0.000000 0.000000 0.029703 0.970297 0.000000 0.000000 0.633663 0.000000 0.366337 0.049505 0.465347 0.227723 0.257426 0.138614 0.306931 0.138614 0.415842 1.000000 0.000000 0.000000 0.000000 0.178218 0.000000 0.821782 0.000000 0.000000 0.069307 0.000000 0.930693 0.019802 0.168317 0.564356 0.247525 0.000000 0.000000 1.000000 0.000000 0.000000 0.049505 0.435644 0.514851 0.178218 0.178218 0.039604 0.603960 0.653465 0.019802 0.009901 0.316832 0.475248 0.089109 0.346535 0.089109 0.465347 0.178218 0.207921 0.148515 0.237624 0.059406 0.603960 0.099010 0.039604 0.534653 0.306931 0.118812 0.049505 0.415842 0.445545 0.089109 0.257426 0.356436 0.198020 0.188119 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNBDTGGYYYAGTGGKTARAGSSN MEME-2 regular expression -------------------------------------------------------------------------------- G[CG][CTG][CT][TACG][CT][GTA]T[GA]G[CT][CTG][TC]AGT[GT]G[TG]T[AT][AG][AG][GA][CG][GC][CA] -------------------------------------------------------------------------------- Time 540.14 secs. ******************************************************************************** ******************************************************************************** MOTIF TYMTTTTTTTTTTTTTTTTT MEME-3 width = 20 sites = 86 llr = 925 E-value = 4.4e-052 ******************************************************************************** -------------------------------------------------------------------------------- Motif TYMTTTTTTTTTTTTTTTTT MEME-3 Description -------------------------------------------------------------------------------- Simplified A 1:611:::22:22111:2:: pos.-specific C 1441:2:3212:11:222:3 probability G 21:1:::::11::::1:::: matrix T 75:79896677878968797 bits 2.4 2.2 1.9 1.7 Relative 1.5 * Entropy 1.2 * * * * (15.5 bits) 1.0 *** * * * ** 0.7 ** **** ** ** * ** 0.5 ******************** 0.2 ******************** 0.0 -------------------- Multilevel TTATTTTTTTTTTTTTTTTT consensus CC CC C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYMTTTTTTTTTTTTTTTTT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------- chrV:404051-404867 + 77 2.08e-10 AATAGTTGTT TTCTTTTTTTTTTTTTTTTT TCGA chrIV:884158-884990 + 46 2.08e-10 TGGTTTTCAG TTCTTTTTTTTTTTTTTTTT TTTTTCAGTA chrXIII:236416-236950 + 17 2.06e-09 CTCTTTTGTT TCCTTTTTTTTTTTTGTTTT AGTATTTTAT chrVIII:562255-562575 + 12 3.06e-09 GAACAGGGTT TCATTTTCATTTTTTTTTTT TAATTTCGGT chrX:58707-59499 - 7 1.43e-08 TTTTTAGCAA TTAATTTTTTTTTTTTTTTT TTTTTC chrXII:48688-49162 - 1 1.72e-08 ATCTTAGACA CCCTTTTCTTTTTTTCTTTT chrVI:233505-234244 - 45 1.72e-08 CCACTTAAAA TTATTTTTCTTTCTTTTTTT CTAGAGGAAG chrXI:578716-579436 - 69 2.82e-08 TAATTGAAAC TTATTTTCATTTTTTTTCTT TAGCATTGAA chrIX:197364-197979 + 43 7.20e-08 CGCTTCGGAG TTATTTTTTATTCTTTTTTT TTTAGGGACT chrX:617758-618270 + 56 1.28e-07 TTAGCTCTCA TTATTTTTTGTATTTTTTTT TTTCACTTCC chrXII:5-280 - 43 1.69e-07 AGAACAGGGT TTCATTTTCATTTTTTTTTT AATTTCGGTC chrVIII:85050-85563 - 14 1.69e-07 CAATTTTTTT TGAATTTTTTTTTTTTCTTT AGAAAAATGT chrXVI:880055-880589 - 3 3.70e-07 TAGAGACCAT TTCTTTTCTCTTTCTTTTTC TC chrVII:554769-555879 - 74 3.70e-07 TGTGACT TTATTTTAATTTTTTTTTTT CCTATTGGTC chrIV:1305380-1306124 + 53 3.70e-07 AATTTGTCAG TCAATTTCTTTTGTTTTTTT CTTTAAAAGG chrXV:677972-679219 + 53 4.20e-07 ATACAATATT TTATTTTCTTTTCATTTTTC AGTCATTATC chrXII:604910-605672 - 42 5.38e-07 CCCACCTCGA GCACTTTCTCTTTTTTTTTT AAAAAAAGTT chrXIV:567890-568624 + 49 6.06e-07 TTTCACTTAT TCCTTTTCTAGTATTTTTTT TCCACCTTAT chrIV:519542-520191 + 81 6.06e-07 TTTCCAAGTA ATGTTTTTTTTTTTTTTTTT chrVI:55655-56534 + 37 6.84e-07 AATTTGTTCT GGCTTCTCTTCTTTTTCTTT ATTCCCCCCA chrV:166693-167965 - 17 7.70e-07 GGGCCCAACC ATATTTTTCTTTTCTTTTTC ACCGAATTCT chrIV:644792-645406 - 55 7.70e-07 TGTTGAACCA TCAGTTACTTTTTTTTTTTT TCAGAGAATG chrXI:313154-313703 - 6 8.64e-07 CTAGGAGATG GCATTTTATTTTTTTCCTTT AGCCT chrVII:648750-649399 - 60 9.68e-07 TGTTTTCACC GCCTTCTTTTTATTTTTATC CGAAGATCTT chrIX:288744-289428 + 75 1.09e-06 GTCATATTTT TGATTTTTCGCTTTTTCTTC AGTGTT chrV:85665-86920 + 53 1.22e-06 CACAAATAAA TCCTTTTTTTTATTTTCTAT TTATTTTGTT chrXV:464223-465038 + 11 1.36e-06 GTCGGGTAAC AGATTTTTTTTATTTTTTTC AAGGCCCTTT chrXVI:338581-339166 - 2 1.52e-06 GGCGCTAAAT TTATTTTTTTCTTTTTACTC T chrXV:710006-710531 + 75 1.52e-06 CTTTGATCCT TTATTTTTCTTAATTTCCTT GTCAGT chrXV:616693-617345 - 60 1.69e-06 AAATGATTTT TCACTTTTCTATTTTTTTTC ATCCTCTCAC chrXIV:725879-726413 - 18 1.69e-06 GCATCCTTCA GTATTTTTTTTTATTTTGTC GGGGCCACCA chrXI:451878-452408 - 3 1.69e-06 TCCTCTAGCA TGCTTTTGTTGTTTTTTTTC TT chrXIII:378884-379659 - 71 1.88e-06 TCAATTCCTG TCCGTTTCAATTTATTTTTT AGCCCTGTGC chrIX:1-265 - 53 1.88e-06 GAACAGGATT TCATTTTCATTTTTTTTAAT TTCGGTCAGA chrXIV:632375-632913 + 75 2.33e-06 CCTCACTGGG GTCGTTTTTTTTCTTATTTC AGATAG chrXIV:569599-570158 - 22 2.33e-06 CCGCTAGAGA CCATTCTTTTTTTTTGCATT GGCAATGTGA chrXIII:145773-146298 + 29 2.33e-06 GTTCTTTTCT TCCTTTTCTTGTTTACCTTT TTTGCTTTTT chrXI:617996-619286 + 56 2.33e-06 AGCTTGTCAA TCATTTTCCATTTATGTCTT TCGTTTATGG chrXV:113498-114195 + 76 2.59e-06 CCGATTGGAA GCATTTTTTTTTAATATTTT AAAAT chrXIV:470924-471658 - 38 2.59e-06 TAAAAAAGCT GCATTTTTATTTATTACTTT TTAAATATCA chrIV:1016943-1017534 - 3 2.59e-06 TCCCCGCTTC GGAGTTTCTTTTTTATTTTC TA chrIV:322225-323603 - 12 2.59e-06 TCTTGGCGTC TTCTTCTTCGTTTCTCTTTC TGGAAATTCT chrXIII:131401-132301 - 6 2.87e-06 CCATCGTGAG TGCTTTGTTTCTTCTTTTTT GAATA chrXVI:882750-883614 - 23 3.17e-06 TGAAAGCTAC CTATTCTTTTCTTTTCCCTT AAGCTATTTT chrXVI:280596-282953 + 63 4.28e-06 CTTCCTTTGA TTACTTTTTTTTTTCTTCTC TCAGTTTGTT chrXVI:68985-69512 - 27 4.28e-06 ACTTCTATCC TGAATTTTATCTTTTTTATT TTAACAAATT chrXIV:19107-19677 + 69 4.28e-06 AACTACTAGT ATCTTTTCTGTTTTTCCCTT TCGATAGATA chrXIII:807682-808558 + 79 4.72e-06 AGAGGTTGGT TTCTTTTTCTTACCTTTCTC TT chrIV:667659-668263 - 79 4.72e-06 GA CCATTTTTATTTTTTCTCCT CTATTGTTAA chrXIII:195664-196409 - 65 5.73e-06 CCCAGCTCGC CCCTTTTTTTGATATTTTTT TTGGAGTATT chrX:517411-518160 - 55 6.30e-06 GGCGCTAAGC TTAATTTTTATATTTTTATC GTTTCACCTT chrX:407108-407814 - 24 6.30e-06 TATTGAGTGG CGATTTGCTATTTTTTTTTC TTCGCACCAT chrII:44909-45365 - 36 6.30e-06 GTTTGGCTCA TCGTTCTTCATTTCTTTTTC CTAATTTTGA chrXII:214619-215175 - 15 6.92e-06 TTGCGTCCAT TTATTTTTTACTTTTATTCT CCTTTATTTT chrVII:828404-829339 + 80 6.92e-06 CGATCGAGAA TCATTGTTTCTTATTTTTTT C chrII:415505-415900 - 44 6.92e-06 TTATTACAAG TTCGTCTCATTTCCTTTTTT ACACCCATGC chrXVI:99305-99674 - 13 7.60e-06 CTGCGTATAT GTAGATTTTTTTTTTCTATT TGGAAATAAT chrXI:513025-514426 + 5 9.99e-06 ACGA TTATTTTCTGCTTTCGTTTT ATATGTTTCA chrX:156570-157899 + 16 9.99e-06 CGCTTACTCA GTCCTCTTCTTTCTTCCTTT GCGCGCCATC chrX:89994-90458 - 33 1.09e-05 AAGGATGCCG TCCTTTTTCCGTCTTCCTTC TTTTTCGTAA chrII:604059-607123 + 24 1.19e-05 AAATCACGGA TCATTTTTCATTTTACTTTG TCATTTTTAT chrXIV:631522-632143 - 37 1.30e-05 CCCCATTGAT TTATTTTTATCAAATTTTTT AATATTGCAT chrXII:796371-797449 - 55 1.30e-05 TATTTCTTCT TCCGTCTTATATTTTTTATT GTCCTATTAC chrXI:83950-84726 + 4 1.30e-05 TCA GTAATTTTTTTTTTTAATTT ATTTTTGTGT chrVI:221716-222084 - 26 1.30e-05 CCTTTCCGGC TCCAACTTTCTTTTTTTTTC GAAAATGATG chrIV:117113-118208 - 71 1.30e-05 TCTGCAGTTG TCAGTCTTTATTATTTTGTT CATCTCAAAC chrXIII:572698-573352 - 27 1.42e-05 TGCTGATAAA TTATTCTCCATTGTTGCTTT TATTGAGTAT chrVII:400890-401781 + 11 1.42e-05 ATTTTTCTTT TTATTCTTAATTTTTTTACT TTACTTTAAT chrV:207111-207680 + 81 1.42e-05 CTAGGAGATG GCATATTTATTTTTTATATT chrII:89656-90036 - 58 1.42e-05 ATAATATAGG TCCTTTTTCGGATTTGTCTC CACCCATTTC chrVII:179762-180909 - 6 1.69e-05 AGCGAACCGA TTCTTTTATTATTTTCTCTC TGCCT chrIV:1116451-1117160 + 5 1.69e-05 GAGC TCATTCGTAGCTTTTTTCTT GTCAGTCTGA chrXIV:89011-90384 - 76 1.84e-05 TTTTG TTTGTTTTTTTTATTGTTTT GCTTCGTAGT chrVIII:466745-467432 + 45 2.00e-05 TTATTTTTTT TCCCTTTGTTCTTATTTCTC TATCATTTAT chrVII:122007-122683 + 43 2.36e-05 CCCCCTACAG GGCTATTCTTTTTTTGTTCT ATATGAACAG chrV:550939-551584 + 2 2.36e-05 A TCATTTTTTATTTTTTTAAG CAGAACGTGC chrVII:700102-701257 + 10 3.25e-05 TTTATAAAT TGCGTTTGCTTTATTCCCTT ACCCAACAGA chrVII:544392-546168 + 34 3.51e-05 TAGGAGCCTA ACAATCTTTTTTTATATTTT TCCATATTCC chrXIII:123269-124732 + 52 3.80e-05 ACGTCATTTA TCAGTTTTCATTGTATTATT TTGTTCGACG chrIV:304705-305344 - 15 3.80e-05 GTGTTGTCGA CTATTTTTTTCTTAAATTTT CATCACATAT chrXIV:443453-444817 - 10 4.43e-05 TCTAAAGGGG TTCTTTGCAGTAATTTTTTC AAAAAAGAG chrXII:975753-976270 - 5 4.43e-05 CTCACTGGGG TCGTTTATTTTTTTTGCATT AAAT chrIV:619651-620250 + 3 4.43e-05 AA CTCTTTTCTATATTTTAATT GTCACTAGGT chrII:265919-266685 - 30 5.54e-05 ACTCAAACTT GTATTTTCCTCTATATTTAT CTCATCTTGG chrXI:490678-491476 + 29 5.96e-05 TTTTACTTTT ATAATTTTCTTATTATCTTT TCAGTTATTG chrIV:190306-191415 - 47 7.95e-05 GAGCCCAGCA GTATATTCCTCTACTCTCTT AATTCAAGAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYMTTTTTTTTTTTTTTTTT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrV:404051-404867 2.1e-10 76_[+3]_4 chrIV:884158-884990 2.1e-10 45_[+3]_35 chrXIII:236416-236950 2.1e-09 16_[+3]_64 chrVIII:562255-562575 3.1e-09 11_[+3]_69 chrX:58707-59499 1.4e-08 6_[-3]_74 chrXII:48688-49162 1.7e-08 [-3]_80 chrVI:233505-234244 1.7e-08 44_[-3]_36 chrXI:578716-579436 2.8e-08 68_[-3]_12 chrIX:197364-197979 7.2e-08 42_[+3]_38 chrX:617758-618270 1.3e-07 55_[+3]_25 chrXII:5-280 1.7e-07 42_[-3]_38 chrVIII:85050-85563 1.7e-07 13_[-3]_67 chrXVI:880055-880589 3.7e-07 2_[-3]_78 chrVII:554769-555879 3.7e-07 73_[-3]_7 chrIV:1305380-1306124 3.7e-07 52_[+3]_28 chrXV:677972-679219 4.2e-07 52_[+3]_28 chrXII:604910-605672 5.4e-07 41_[-3]_39 chrXIV:567890-568624 6.1e-07 48_[+3]_32 chrIV:519542-520191 6.1e-07 80_[+3] chrVI:55655-56534 6.8e-07 36_[+3]_44 chrV:166693-167965 7.7e-07 16_[-3]_64 chrIV:644792-645406 7.7e-07 54_[-3]_26 chrXI:313154-313703 8.6e-07 5_[-3]_75 chrVII:648750-649399 9.7e-07 59_[-3]_21 chrIX:288744-289428 1.1e-06 74_[+3]_6 chrV:85665-86920 1.2e-06 52_[+3]_28 chrXV:464223-465038 1.4e-06 10_[+3]_70 chrXVI:338581-339166 1.5e-06 1_[-3]_79 chrXV:710006-710531 1.5e-06 74_[+3]_6 chrXV:616693-617345 1.7e-06 59_[-3]_21 chrXIV:725879-726413 1.7e-06 17_[-3]_63 chrXI:451878-452408 1.7e-06 2_[-3]_78 chrXIII:378884-379659 1.9e-06 70_[-3]_10 chrIX:1-265 1.9e-06 52_[-3]_28 chrXIV:632375-632913 2.3e-06 74_[+3]_6 chrXIV:569599-570158 2.3e-06 21_[-3]_59 chrXIII:145773-146298 2.3e-06 28_[+3]_52 chrXI:617996-619286 2.3e-06 55_[+3]_25 chrXV:113498-114195 2.6e-06 75_[+3]_5 chrXIV:470924-471658 2.6e-06 37_[-3]_43 chrIV:1016943-1017534 2.6e-06 2_[-3]_78 chrIV:322225-323603 2.6e-06 11_[-3]_69 chrXIII:131401-132301 2.9e-06 5_[-3]_75 chrXVI:882750-883614 3.2e-06 22_[-3]_58 chrXVI:280596-282953 4.3e-06 62_[+3]_18 chrXVI:68985-69512 4.3e-06 26_[-3]_54 chrXIV:19107-19677 4.3e-06 68_[+3]_12 chrXIII:807682-808558 4.7e-06 78_[+3]_2 chrIV:667659-668263 4.7e-06 78_[-3]_2 chrXIII:195664-196409 5.7e-06 64_[-3]_16 chrX:517411-518160 6.3e-06 54_[-3]_26 chrX:407108-407814 6.3e-06 23_[-3]_57 chrII:44909-45365 6.3e-06 35_[-3]_45 chrXII:214619-215175 6.9e-06 14_[-3]_66 chrVII:828404-829339 6.9e-06 79_[+3]_1 chrII:415505-415900 6.9e-06 43_[-3]_37 chrXVI:99305-99674 7.6e-06 12_[-3]_68 chrXI:513025-514426 1e-05 4_[+3]_76 chrX:156570-157899 1e-05 15_[+3]_65 chrX:89994-90458 1.1e-05 32_[-3]_48 chrII:604059-607123 1.2e-05 23_[+3]_57 chrXIV:631522-632143 1.3e-05 36_[-3]_44 chrXII:796371-797449 1.3e-05 54_[-3]_26 chrXI:83950-84726 1.3e-05 3_[+3]_77 chrVI:221716-222084 1.3e-05 25_[-3]_55 chrIV:117113-118208 1.3e-05 70_[-3]_10 chrXIII:572698-573352 1.4e-05 26_[-3]_54 chrVII:400890-401781 1.4e-05 10_[+3]_70 chrV:207111-207680 1.4e-05 80_[+3] chrII:89656-90036 1.4e-05 57_[-3]_23 chrVII:179762-180909 1.7e-05 5_[-3]_75 chrIV:1116451-1117160 1.7e-05 4_[+3]_76 chrXIV:89011-90384 1.8e-05 75_[-3]_5 chrVIII:466745-467432 2e-05 44_[+3]_36 chrVII:122007-122683 2.4e-05 42_[+3]_38 chrV:550939-551584 2.4e-05 1_[+3]_79 chrVII:700102-701257 3.2e-05 9_[+3]_71 chrVII:544392-546168 3.5e-05 33_[+3]_47 chrXIII:123269-124732 3.8e-05 51_[+3]_29 chrIV:304705-305344 3.8e-05 14_[-3]_66 chrXIV:443453-444817 4.4e-05 9_[-3]_71 chrXII:975753-976270 4.4e-05 4_[-3]_76 chrIV:619651-620250 4.4e-05 2_[+3]_78 chrII:265919-266685 5.5e-05 29_[-3]_51 chrXI:490678-491476 6e-05 28_[+3]_52 chrIV:190306-191415 8e-05 46_[-3]_34 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYMTTTTTTTTTTTTTTTTT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TYMTTTTTTTTTTTTTTTTT width=20 seqs=86 chrV:404051-404867 ( 77) TTCTTTTTTTTTTTTTTTTT 1 chrIV:884158-884990 ( 46) TTCTTTTTTTTTTTTTTTTT 1 chrXIII:236416-236950 ( 17) TCCTTTTTTTTTTTTGTTTT 1 chrVIII:562255-562575 ( 12) TCATTTTCATTTTTTTTTTT 1 chrX:58707-59499 ( 7) TTAATTTTTTTTTTTTTTTT 1 chrXII:48688-49162 ( 1) CCCTTTTCTTTTTTTCTTTT 1 chrVI:233505-234244 ( 45) TTATTTTTCTTTCTTTTTTT 1 chrXI:578716-579436 ( 69) TTATTTTCATTTTTTTTCTT 1 chrIX:197364-197979 ( 43) TTATTTTTTATTCTTTTTTT 1 chrX:617758-618270 ( 56) TTATTTTTTGTATTTTTTTT 1 chrXII:5-280 ( 43) TTCATTTTCATTTTTTTTTT 1 chrVIII:85050-85563 ( 14) TGAATTTTTTTTTTTTCTTT 1 chrXVI:880055-880589 ( 3) TTCTTTTCTCTTTCTTTTTC 1 chrVII:554769-555879 ( 74) TTATTTTAATTTTTTTTTTT 1 chrIV:1305380-1306124 ( 53) TCAATTTCTTTTGTTTTTTT 1 chrXV:677972-679219 ( 53) TTATTTTCTTTTCATTTTTC 1 chrXII:604910-605672 ( 42) GCACTTTCTCTTTTTTTTTT 1 chrXIV:567890-568624 ( 49) TCCTTTTCTAGTATTTTTTT 1 chrIV:519542-520191 ( 81) ATGTTTTTTTTTTTTTTTTT 1 chrVI:55655-56534 ( 37) GGCTTCTCTTCTTTTTCTTT 1 chrV:166693-167965 ( 17) ATATTTTTCTTTTCTTTTTC 1 chrIV:644792-645406 ( 55) TCAGTTACTTTTTTTTTTTT 1 chrXI:313154-313703 ( 6) GCATTTTATTTTTTTCCTTT 1 chrVII:648750-649399 ( 60) GCCTTCTTTTTATTTTTATC 1 chrIX:288744-289428 ( 75) TGATTTTTCGCTTTTTCTTC 1 chrV:85665-86920 ( 53) TCCTTTTTTTTATTTTCTAT 1 chrXV:464223-465038 ( 11) AGATTTTTTTTATTTTTTTC 1 chrXVI:338581-339166 ( 2) TTATTTTTTTCTTTTTACTC 1 chrXV:710006-710531 ( 75) TTATTTTTCTTAATTTCCTT 1 chrXV:616693-617345 ( 60) TCACTTTTCTATTTTTTTTC 1 chrXIV:725879-726413 ( 18) GTATTTTTTTTTATTTTGTC 1 chrXI:451878-452408 ( 3) TGCTTTTGTTGTTTTTTTTC 1 chrXIII:378884-379659 ( 71) TCCGTTTCAATTTATTTTTT 1 chrIX:1-265 ( 53) TCATTTTCATTTTTTTTAAT 1 chrXIV:632375-632913 ( 75) GTCGTTTTTTTTCTTATTTC 1 chrXIV:569599-570158 ( 22) CCATTCTTTTTTTTTGCATT 1 chrXIII:145773-146298 ( 29) TCCTTTTCTTGTTTACCTTT 1 chrXI:617996-619286 ( 56) TCATTTTCCATTTATGTCTT 1 chrXV:113498-114195 ( 76) GCATTTTTTTTTAATATTTT 1 chrXIV:470924-471658 ( 38) GCATTTTTATTTATTACTTT 1 chrIV:1016943-1017534 ( 3) GGAGTTTCTTTTTTATTTTC 1 chrIV:322225-323603 ( 12) TTCTTCTTCGTTTCTCTTTC 1 chrXIII:131401-132301 ( 6) TGCTTTGTTTCTTCTTTTTT 1 chrXVI:882750-883614 ( 23) CTATTCTTTTCTTTTCCCTT 1 chrXVI:280596-282953 ( 63) TTACTTTTTTTTTTCTTCTC 1 chrXVI:68985-69512 ( 27) TGAATTTTATCTTTTTTATT 1 chrXIV:19107-19677 ( 69) ATCTTTTCTGTTTTTCCCTT 1 chrXIII:807682-808558 ( 79) TTCTTTTTCTTACCTTTCTC 1 chrIV:667659-668263 ( 79) CCATTTTTATTTTTTCTCCT 1 chrXIII:195664-196409 ( 65) CCCTTTTTTTGATATTTTTT 1 chrX:517411-518160 ( 55) TTAATTTTTATATTTTTATC 1 chrX:407108-407814 ( 24) CGATTTGCTATTTTTTTTTC 1 chrII:44909-45365 ( 36) TCGTTCTTCATTTCTTTTTC 1 chrXII:214619-215175 ( 15) TTATTTTTTACTTTTATTCT 1 chrVII:828404-829339 ( 80) TCATTGTTTCTTATTTTTTT 1 chrII:415505-415900 ( 44) TTCGTCTCATTTCCTTTTTT 1 chrXVI:99305-99674 ( 13) GTAGATTTTTTTTTTCTATT 1 chrXI:513025-514426 ( 5) TTATTTTCTGCTTTCGTTTT 1 chrX:156570-157899 ( 16) GTCCTCTTCTTTCTTCCTTT 1 chrX:89994-90458 ( 33) TCCTTTTTCCGTCTTCCTTC 1 chrII:604059-607123 ( 24) TCATTTTTCATTTTACTTTG 1 chrXIV:631522-632143 ( 37) TTATTTTTATCAAATTTTTT 1 chrXII:796371-797449 ( 55) TCCGTCTTATATTTTTTATT 1 chrXI:83950-84726 ( 4) GTAATTTTTTTTTTTAATTT 1 chrVI:221716-222084 ( 26) TCCAACTTTCTTTTTTTTTC 1 chrIV:117113-118208 ( 71) TCAGTCTTTATTATTTTGTT 1 chrXIII:572698-573352 ( 27) TTATTCTCCATTGTTGCTTT 1 chrVII:400890-401781 ( 11) TTATTCTTAATTTTTTTACT 1 chrV:207111-207680 ( 81) GCATATTTATTTTTTATATT 1 chrII:89656-90036 ( 58) TCCTTTTTCGGATTTGTCTC 1 chrVII:179762-180909 ( 6) TTCTTTTATTATTTTCTCTC 1 chrIV:1116451-1117160 ( 5) TCATTCGTAGCTTTTTTCTT 1 chrXIV:89011-90384 ( 76) TTTGTTTTTTTTATTGTTTT 1 chrVIII:466745-467432 ( 45) TCCCTTTGTTCTTATTTCTC 1 chrVII:122007-122683 ( 43) GGCTATTCTTTTTTTGTTCT 1 chrV:550939-551584 ( 2) TCATTTTTTATTTTTTTAAG 1 chrVII:700102-701257 ( 10) TGCGTTTGCTTTATTCCCTT 1 chrVII:544392-546168 ( 34) ACAATCTTTTTTTATATTTT 1 chrXIII:123269-124732 ( 52) TCAGTTTTCATTGTATTATT 1 chrIV:304705-305344 ( 15) CTATTTTTTTCTTAAATTTT 1 chrXIV:443453-444817 ( 10) TTCTTTGCAGTAATTTTTTC 1 chrXII:975753-976270 ( 5) TCGTTTATTTTTTTTGCATT 1 chrIV:619651-620250 ( 3) CTCTTTTCTATATTTTAATT 1 chrII:265919-266685 ( 30) GTATTTTCCTCTATATTTAT 1 chrXI:490678-491476 ( 29) ATAATTTTCTTATTATCTTT 1 chrIV:190306-191415 ( 47) GTATATTCCTCTACTCTCTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYMTTTTTTTTTTTTTTTTT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 43983 bayes= 10.0037 E= 4.4e-052 -216 -101 -1 106 -1307 112 -55 57 92 95 -242 -475 -143 -169 -55 116 -243 -1307 -1307 159 -1307 -10 -401 138 -375 -1307 -201 157 -316 64 -242 103 -84 31 -1307 92 -75 -169 -101 108 -316 -20 -142 123 -105 -1307 -1307 144 -105 -101 -242 120 -158 -101 -1307 136 -194 -301 -1307 152 -175 -20 -84 103 -316 8 -1307 129 -105 -10 -301 106 -275 -201 -1307 154 -1307 58 -301 116 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYMTTTTTTTTTTTTTTTTT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 86 E= 4.4e-052 0.069767 0.093023 0.186047 0.651163 0.000000 0.406977 0.127907 0.465116 0.593023 0.360465 0.034884 0.011628 0.116279 0.058140 0.127907 0.697674 0.058140 0.000000 0.000000 0.941860 0.000000 0.174419 0.011628 0.813953 0.023256 0.000000 0.046512 0.930233 0.034884 0.290698 0.034884 0.639535 0.174419 0.232558 0.000000 0.593023 0.186047 0.058140 0.093023 0.662791 0.034884 0.162791 0.069767 0.732558 0.151163 0.000000 0.000000 0.848837 0.151163 0.093023 0.034884 0.720930 0.104651 0.093023 0.000000 0.802326 0.081395 0.023256 0.000000 0.895349 0.093023 0.162791 0.104651 0.639535 0.034884 0.197674 0.000000 0.767442 0.151163 0.174419 0.023256 0.651163 0.046512 0.046512 0.000000 0.906977 0.000000 0.279070 0.023256 0.697674 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYMTTTTTTTTTTTTTTTTT MEME-3 regular expression -------------------------------------------------------------------------------- T[TC][AC]TTTT[TC][TC]TTTTTTTTTT[TC] -------------------------------------------------------------------------------- Time 780.29 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrI:5-1019 2.53e-01 100 chrI:76047-76662 5.43e-01 100 chrI:81877-82560 4.97e-03 68_[+1(2.88e-05)]_7 chrI:138877-139361 4.56e-01 100 chrI:166039-166571 4.94e-16 11_[+2(6.31e-12)]_15_[-1(4.34e-12)]_\ 22 chrI:180890-181513 1.07e-01 72_[-1(6.90e-05)]_3 chrI:182326-182797 4.33e-14 16_[+1(4.02e-08)]_24_[-2(3.08e-11)]_\ 8 chrI:229467-230192 7.81e-02 53_[+2(8.14e-05)]_20 chrII:9367-9877 2.04e-08 10_[+2(1.91e-08)]_26_[-1(1.69e-07)]_\ 12 chrII:36151-36584 2.64e-01 100 chrII:44909-45365 6.97e-03 35_[-3(6.30e-06)]_45 chrII:60188-61320 8.94e-01 100 chrII:88012-88578 5.15e-01 100 chrII:89656-90036 3.01e-02 57_[-3(1.42e-05)]_23 chrII:165097-165406 1.08e-01 100 chrII:167612-168231 9.24e-01 100 chrII:181267-181680 1.94e-01 100 chrII:197204-197884 2.60e-07 42_[-1(4.75e-11)]_33 chrII:226852-227835 9.34e-01 100 chrII:242315-242677 7.95e-01 100 chrII:265919-266685 2.36e-02 29_[-3(5.54e-05)]_51 chrII:326550-327148 3.39e-05 39_[-2(7.31e-08)]_34 chrII:332213-333804 8.07e-01 100 chrII:347398-347966 1.48e-04 23_[-1(1.69e-07)]_52 chrII:350143-351171 3.15e-01 100 chrII:405244-406280 8.42e-01 100 chrII:415505-415900 1.60e-03 43_[-3(6.92e-06)]_37 chrII:477082-477780 2.96e-02 51_[+2(9.28e-05)]_22 chrII:592321-593331 6.50e-01 100 chrII:604059-607123 2.42e-02 23_[+3(1.19e-05)]_57 chrII:642860-643296 4.74e-03 23_[-2(1.59e-06)]_50 chrII:644939-645901 9.76e-01 100 chrII:680959-682284 4.16e-01 100 chrII:761157-761505 8.41e-01 100 chrII:812990-813182 3.73e-01 100 chrIII:5-1320 8.03e-01 100 chrIII:65307-65753 7.92e-02 100 chrIII:82347-82770 5.54e-01 100 chrIII:103121-103461 8.11e-01 100 chrIII:118180-118923 9.41e-01 100 chrIII:123360-123827 6.01e-10 39_[+1(1.68e-14)]_36 chrIII:127516-127886 6.16e-05 64_[+2(7.60e-09)]_9 chrIII:141946-142991 6.12e-01 100 chrIII:163443-163897 8.24e-01 100 chrIII:168035-168610 4.85e-09 34_[+1(2.20e-09)]_14_[-2(4.61e-07)] chrIII:177081-179302 8.58e-01 100 chrIII:192770-193392 2.41e-01 100 chrIII:227732-228434 6.50e-01 100 chrIII:279683-280969 8.34e-01 100 chrIII:281307-281687 5.51e-01 100 chrIII:294966-295879 2.46e-01 100 chrIII:315751-316618 3.93e-01 100 chrIV:30-394 6.34e-01 100 chrIV:42101-42722 8.01e-01 100 chrIV:51934-52526 1.39e-01 100 chrIV:83285-83830 1.40e-05 40_[+2(1.08e-08)]_33 chrIV:87427-87915 9.18e-01 100 chrIV:106714-107344 4.99e-03 100 chrIV:117113-118208 3.15e-02 70_[-3(1.30e-05)]_10 chrIV:126183-126514 3.12e-01 100 chrIV:129700-131027 9.08e-01 100 chrIV:190306-191415 2.24e-02 46_[-3(7.95e-05)]_34 chrIV:216551-216772 7.22e-01 100 chrIV:217148-218069 3.08e-01 100 chrIV:221000-222386 5.35e-01 100 chrIV:229423-230362 2.17e-01 100 chrIV:304705-305344 2.08e-02 14_[-3(3.80e-05)]_66 chrIV:307980-310127 1.61e-01 100 chrIV:321611-321976 2.32e-01 100 chrIV:322225-323603 1.42e-03 11_[-3(2.59e-06)]_69 chrIV:340127-341711 7.83e-01 100 chrIV:358022-358481 1.38e-01 100 chrIV:359348-359842 1.51e-04 31_[+2(1.53e-08)]_42 chrIV:410186-410702 2.57e-07 26_[-1(2.71e-10)]_49 chrIV:411231-411675 3.15e-01 100 chrIV:433944-434557 9.79e-06 69_[+1(2.47e-09)]_6 chrIV:437528-438199 1.38e-05 9_[-1(4.02e-08)]_66 chrIV:488467-489188 2.30e-10 25_[+1(4.60e-10)]_16_[-2(7.31e-08)]_\ 7 chrIV:489729-491289 9.39e-01 100 chrIV:519542-520191 4.44e-03 80_[+3(6.06e-07)] chrIV:520386-521455 4.17e-01 100 chrIV:538983-539284 1.34e-01 100 chrIV:568674-569317 9.48e-07 18_[+2(3.01e-06)]_14_[-1(2.21e-07)]_\ 16 chrIV:578979-580784 1.63e-01 100 chrIV:619651-620250 1.15e-07 2_[+3(4.43e-05)]_28_[-3(9.15e-05)]_\ 4_[+1(3.81e-09)]_1 chrIV:644792-645406 3.56e-04 54_[-3(7.70e-07)]_26 chrIV:667659-668263 1.46e-02 78_[-3(4.72e-06)]_2 chrIV:802218-803029 4.18e-01 100 chrIV:835762-836261 4.41e-01 100 chrIV:884158-884990 2.23e-06 45_[+3(2.08e-10)]_35 chrIV:946124-946621 7.01e-02 47_[-1(3.09e-05)]_28 chrIV:980675-981275 1.41e-06 9_[-3(7.41e-05)]_25_[+1(4.02e-08)]_\ 21 chrIV:992617-993365 7.29e-01 100 chrIV:1013389-1013937 8.76e-01 100 chrIV:1016943-1017534 6.42e-11 2_[-3(2.59e-06)]_2_[+1(3.54e-10)]_\ 14_[-2(4.11e-05)]_10 chrIV:1059221-1059859 9.06e-01 100 chrIV:1075090-1075937 1.88e-10 14_[+1(2.13e-11)]_15_[-2(5.36e-06)]_\ 19 chrIV:1095131-1095746 4.76e-05 46_[-2(5.28e-09)]_27 chrIV:1116451-1117160 2.50e-02 4_[+3(1.69e-05)]_76 chrIV:1135290-1136525 6.64e-01 100 chrIV:1149734-1151198 1.87e-01 100 chrIV:1175588-1176075 1.28e-04 47_[+2(1.07e-07)]_26 chrIV:1201478-1202443 2.77e-01 100 chrIV:1256776-1257296 3.33e-12 27_[+1(1.80e-11)]_14_[-2(9.74e-08)]_\ 7 chrIV:1300462-1301356 7.37e-01 100 chrIV:1305380-1306124 3.31e-03 52_[+3(3.70e-07)]_28 chrIV:1352311-1352764 2.31e-05 24_[-2(1.43e-09)]_49 chrIV:1355719-1356205 2.27e-01 100 chrIV:1358446-1358963 4.33e-01 100 chrIV:1359161-1360792 2.51e-01 100 chrIV:1401024-1402031 9.53e-01 100 chrIV:1436443-1437133 1.42e-01 100 chrIV:1450252-1451256 3.93e-01 100 chrIV:1461448-1462060 1.16e-01 16_[+1(6.90e-05)]_59 chrIV:1524133-1525675 5.93e-03 2_[-2(1.13e-06)]_71 chrIX:1-265 4.88e-03 52_[-3(1.88e-06)]_28 chrIX:67972-69558 9.74e-01 100 chrIX:99613-100101 1.29e-01 100 chrIX:148305-148960 5.89e-01 100 chrIX:174787-175248 1.08e-06 63_[+2(3.32e-10)]_10 chrIX:183039-183874 3.36e-07 39_[+1(4.75e-11)]_36 chrIX:197364-197979 2.54e-10 11_[-1(3.54e-10)]_6_[+3(7.20e-08)]_\ 38 chrIX:210507-210962 1.38e-07 23_[-1(4.75e-11)]_52 chrIX:248589-249066 3.24e-06 72_[+2(1.49e-10)]_1 chrIX:254211-254554 7.80e-01 100 chrIX:257343-258157 3.31e-01 100 chrIX:288744-289428 4.38e-04 74_[+3(1.09e-06)]_6 chrIX:299481-300507 6.76e-01 100 chrIX:316090-317914 9.54e-01 100 chrIX:324165-324616 9.11e-03 7_[-2(3.01e-06)]_66 chrIX:325498-326144 1.82e-05 18_[-1(2.47e-09)]_57 chrIX:335760-336644 8.72e-02 100 chrIX:370156-370640 1.66e-02 68_[+2(5.64e-05)]_5 chrIX:375284-375581 7.74e-02 100 chrIX:378151-378721 6.00e-01 100 chrIX:438764-439885 1.02e-02 25_[-2(1.82e-06)]_48 chrV:6141-6572 8.25e-01 100 chrV:53505-54033 2.59e-01 100 chrV:61068-62159 1.08e-01 100 chrV:85124-85448 2.80e-01 100 chrV:85665-86920 8.12e-03 6_[+3(2.10e-06)]_26_[+3(1.22e-06)]_\ 28 chrV:99069-100336 6.24e-02 66_[+1(2.26e-05)]_9 chrV:117250-118338 3.36e-01 100 chrV:130849-131470 1.50e-03 17_[-2(8.47e-07)]_56 chrV:135100-135714 1.58e-08 6_[+2(1.10e-05)]_40_[+1(1.10e-09)]_\ 2 chrV:138429-139973 5.04e-02 100 chrV:140179-140911 9.75e-01 100 chrV:166693-167965 1.69e-03 16_[-3(7.70e-07)]_64 chrV:176824-177527 5.32e-05 14_[-1(4.24e-09)]_61 chrV:207111-207680 1.87e-09 11_[+2(3.93e-07)]_14_[-1(2.52e-07)]_\ 3_[+3(1.42e-05)] chrV:250103-251053 2.82e-01 100 chrV:270352-270936 8.35e-01 100 chrV:288156-288814 3.66e-10 13_[+1(2.86e-07)]_24_[-2(1.49e-10)]_\ 11 chrV:304995-307754 3.68e-01 100 chrV:311780-312304 6.07e-08 36_[+1(4.34e-12)]_39 chrV:354678-355397 7.90e-01 100 chrV:362117-362508 8.79e-01 100 chrV:396147-397966 9.59e-01 100 chrV:404051-404867 2.65e-06 76_[+3(2.08e-10)]_4 chrV:409606-410055 6.62e-01 100 chrV:423075-424308 5.64e-01 100 chrV:430932-431576 1.22e-01 100 chrV:434390-434781 4.88e-07 11_[+1(2.52e-07)]_14_[-2(3.93e-07)]_\ 23 chrV:435106-436041 6.20e-01 100 chrV:438383-438975 3.64e-06 70_[+2(1.25e-09)]_3 chrV:441759-442668 9.72e-01 100 chrV:443010-443510 4.56e-07 38_[-2(3.71e-11)]_35 chrV:469232-469727 2.40e-13 27_[+2(1.25e-09)]_16_[-1(1.28e-11)]_\ 5 chrV:487102-487648 8.80e-07 11_[+1(4.24e-09)]_14_[-2(5.64e-05)]_\ 23 chrV:492202-492578 9.68e-10 17_[+1(3.81e-09)]_15_[-2(2.94e-08)]_\ 16 chrV:550939-551584 3.71e-02 1_[+3(2.36e-05)]_79 chrVI:4455-5430 4.54e-01 100 chrVI:55655-56534 2.62e-03 36_[+3(6.84e-07)]_44 chrVI:63915-65406 8.43e-01 100 chrVI:95457-95883 2.80e-01 100 chrVI:101096-101660 2.55e-05 47_[+2(2.64e-08)]_26 chrVI:137200-137818 2.50e-10 32_[+1(1.27e-08)]_16_[-2(7.60e-09)] chrVI:157636-158270 1.39e-04 18_[+1(1.68e-08)]_57 chrVI:162004-162787 1.21e-01 100 chrVI:167072-167694 5.83e-01 100 chrVI:180632-181263 1.31e-01 100 chrVI:191289-191821 1.43e-03 13_[+1(6.55e-07)]_62 chrVI:204778-205207 5.15e-09 27_[-2(2.63e-12)]_46 chrVI:209944-210972 6.11e-01 100 chrVI:221716-222084 3.06e-02 25_[-3(1.30e-05)]_55 chrVI:223272-224155 1.79e-02 100 chrVI:226536-226966 2.50e-05 32_[-2(1.43e-09)]_41 chrVI:229011-229279 8.42e-02 100 chrVI:233505-234244 1.40e-04 44_[-3(1.72e-08)]_36 chrVI:251563-252986 8.85e-01 100 chrVI:269858-270157 2.00e-01 100 chrVII:19-989 5.35e-03 68_[+2(1.13e-06)]_5 chrVII:36588-37129 5.14e-01 100 chrVII:73031-74222 5.12e-01 100 chrVII:80893-81582 4.12e-01 100 chrVII:110381-110938 3.03e-07 21_[+1(2.52e-07)]_14_[-2(3.93e-07)]_\ 13 chrVII:114982-115785 2.57e-01 100 chrVII:122007-122683 1.32e-07 15_[-1(1.10e-09)]_2_[+3(2.36e-05)]_\ 38 chrVII:130856-131847 3.50e-01 100 chrVII:141497-141888 2.80e-02 100 chrVII:148196-149542 4.48e-01 100 chrVII:179762-180909 1.71e-02 5_[-3(1.69e-05)]_75 chrVII:185470-186136 6.25e-06 6_[-2(1.43e-09)]_67 chrVII:205297-205819 5.92e-05 12_[+2(7.60e-09)]_61 chrVII:254101-254761 8.32e-01 100 chrVII:276893-278655 8.07e-01 100 chrVII:287048-287687 2.07e-06 38_[+1(2.63e-08)]_37 chrVII:310396-312448 4.96e-01 100 chrVII:319595-320219 3.12e-01 100 chrVII:328383-328987 3.70e-01 100 chrVII:364895-366647 6.75e-01 100 chrVII:371255-371470 1.12e-01 100 chrVII:400890-401781 1.83e-02 10_[+3(1.42e-05)]_70 chrVII:405268-405801 7.23e-06 26_[-1(5.23e-10)]_49 chrVII:411975-412587 1.50e-08 68_[+1(1.28e-11)]_7 chrVII:422883-423595 4.86e-01 100 chrVII:438566-439685 4.63e-01 100 chrVII:440271-441009 6.68e-01 100 chrVII:441288-441532 4.78e-01 100 chrVII:452264-452588 3.83e-01 100 chrVII:531387-531786 4.21e-04 46_[+1(9.46e-05)]_2_[+2(3.01e-06)] chrVII:533505-535230 7.06e-01 100 chrVII:541635-542221 6.85e-06 12_[-1(4.24e-09)]_63 chrVII:544392-546168 5.61e-02 33_[+3(3.51e-05)]_47 chrVII:554769-555879 6.01e-05 12_[-1(8.62e-05)]_36_[-3(3.70e-07)]_\ 7 chrVII:561005-561954 3.77e-01 100 chrVII:635671-636215 9.21e-01 100 chrVII:648750-649399 3.79e-04 59_[-3(9.68e-07)]_21 chrVII:661479-661941 4.30e-01 100 chrVII:700102-701257 5.42e-06 9_[+3(3.25e-05)]_16_[+2(5.44e-08)]_\ 28 chrVII:706882-707354 1.21e-04 45_[+1(6.02e-08)]_30 chrVII:726324-728034 7.17e-01 100 chrVII:729526-730151 2.23e-02 100 chrVII:730914-731469 1.26e-05 38_[-1(1.27e-08)]_37 chrVII:736176-736551 1.82e-09 26_[+2(4.98e-07)]_14_[-1(5.23e-10)]_\ 8 chrVII:738869-739565 6.45e-01 100 chrVII:774127-774646 3.65e-15 12_[+2(2.63e-12)]_15_[-1(2.71e-10)]_\ 21 chrVII:779384-779945 1.06e-10 1_[+2(5.44e-08)]_14_[-1(5.23e-10)]_\ 33 chrVII:788298-788797 5.18e-01 100 chrVII:794151-794593 4.73e-01 100 chrVII:823263-823716 1.45e-05 42_[+2(1.25e-09)]_31 chrVII:828404-829339 8.50e-03 79_[+3(6.92e-06)]_1 chrVII:843339-844078 7.57e-01 100 chrVII:845396-845946 6.31e-12 27_[+2(1.08e-08)]_13_[-1(7.52e-11)]_\ 8 chrVII:856749-856961 1.50e-01 100 chrVII:857200-857688 7.75e-05 70_[-2(7.60e-09)]_3 chrVII:876157-876754 8.13e-06 30_[-1(1.10e-09)]_45 chrVII:878571-879081 7.58e-02 12_[-2(6.90e-05)]_61 chrVII:919983-920228 3.69e-01 100 chrVII:921986-922343 9.00e-01 100 chrVII:930779-931255 3.07e-05 29_[-2(1.08e-08)]_44 chrVII:1000355-1000593 5.65e-01 100 chrVII:1003938-1004437 2.20e-01 100 chrVIII:62271-63045 8.08e-01 100 chrVIII:74880-75913 8.26e-02 100 chrVIII:85050-85563 1.76e-11 13_[-3(1.69e-07)]_14_[+1(1.28e-11)]_\ 28 chrVIII:103826-104723 3.50e-01 100 chrVIII:115911-116438 4.83e-06 28_[-2(3.32e-10)]_45 chrVIII:125871-127484 6.00e-01 100 chrVIII:132754-133367 1.15e-12 21_[+1(4.02e-08)]_24_[-2(3.08e-11)]_\ 3 chrVIII:134054-134616 1.90e-04 35_[+2(4.61e-07)]_38 chrVIII:145969-146455 1.36e-01 100 chrVIII:148926-149444 4.52e-01 100 chrVIII:160505-161007 6.63e-01 100 chrVIII:164536-165142 9.31e-01 100 chrVIII:175044-175382 4.78e-01 100 chrVIII:237690-238152 4.94e-05 41_[-2(1.53e-08)]_32 chrVIII:281085-281808 1.90e-01 100 chrVIII:296845-297254 1.74e-01 100 chrVIII:358167-358799 3.61e-05 50_[+1(1.68e-08)]_25 chrVIII:381515-383386 2.99e-01 100 chrVIII:388652-389215 1.89e-07 15_[+1(7.52e-11)]_60 chrVIII:466745-467432 3.72e-02 44_[+3(2.00e-05)]_36 chrVIII:475479-475909 2.44e-07 67_[+1(2.13e-11)]_8 chrVIII:491789-492291 2.93e-01 100 chrVIII:505805-506239 7.40e-01 100 chrVIII:555985-557218 3.06e-01 100 chrVIII:562255-562575 2.51e-05 11_[+3(3.06e-09)]_69 chrX:58707-59499 2.22e-10 6_[-3(1.43e-08)]_26_[+1(2.47e-09)]_\ 23 chrX:73301-76482 8.14e-01 100 chrX:89994-90458 4.06e-02 32_[-3(1.09e-05)]_48 chrX:115439-116865 5.16e-01 100 chrX:139188-140820 6.24e-01 100 chrX:146940-147280 3.14e-01 100 chrX:156570-157899 4.51e-02 15_[+3(9.99e-06)]_65 chrX:197158-197618 6.06e-08 20_[-2(2.63e-12)]_53 chrX:204480-205051 6.12e-07 19_[+2(3.01e-06)]_14_[-1(2.21e-07)]_\ 15 chrX:233673-234202 2.16e-05 51_[+2(2.94e-08)]_22 chrX:353986-354527 2.86e-03 37_[+2(9.11e-07)]_36 chrX:355136-355737 3.79e-09 28_[-1(5.23e-10)]_16_[+2(3.01e-06)]_\ 4 chrX:373399-374841 5.96e-02 100 chrX:378106-378586 1.90e-05 63_[+2(1.25e-09)]_10 chrX:390795-391328 2.31e-05 37_[+1(2.01e-08)]_38 chrX:396543-397036 2.67e-05 30_[-2(1.08e-08)]_43 chrX:407108-407814 8.74e-03 23_[-3(6.30e-06)]_57 chrX:414747-415277 1.57e-11 3_[+2(1.43e-09)]_15_[-1(1.10e-09)]_\ 30 chrX:415681-416321 1.19e-02 58_[-2(6.90e-05)]_15 chrX:422677-423295 1.18e-09 [+2(1.07e-07)]_15_[-1(2.01e-08)]_33 chrX:424288-424770 8.15e-05 9_[-2(1.91e-08)]_64 chrX:517411-518160 1.80e-02 54_[-3(6.30e-06)]_26 chrX:523854-524392 2.98e-01 100 chrX:531543-532186 3.15e-12 13_[+2(1.08e-08)]_13_[-1(7.52e-11)]_\ 22 chrX:538346-539135 3.25e-02 14_[+2(4.74e-05)]_59 chrX:541319-541770 2.70e-06 13_[+2(3.01e-06)]_14_[-1(2.21e-07)]_\ 21 chrX:542761-543417 8.44e-01 100 chrX:554589-556401 4.40e-01 100 chrX:607794-609016 3.08e-01 100 chrX:617758-618270 9.00e-06 24_[-1(2.26e-05)]_6_[+3(1.28e-07)]_\ 25 chrX:651080-651622 6.70e-01 100 chrX:690419-690843 1.17e-01 100 chrX:703255-703645 2.96e-01 100 chrX:745175-745734 1.24e-02 35_[+2(7.77e-06)]_38 chrXI:1-1050 2.54e-03 73_[+2(6.78e-07)] chrXI:46611-47030 5.07e-04 9_[-2(1.54e-07)]_64 chrXI:67745-68031 8.56e-01 100 chrXI:74361-74990 2.23e-06 41_[-1(1.27e-08)]_34 chrXI:83950-84726 3.06e-02 3_[+3(1.30e-05)]_77 chrXI:93146-93468 4.18e-01 100 chrXI:108730-109091 9.37e-01 100 chrXI:140720-141430 4.78e-02 37_[-2(5.64e-05)]_36 chrXI:158141-159295 2.24e-01 100 chrXI:162282-162738 1.93e-09 32_[+1(5.23e-10)]_14_[-2(4.98e-07)]_\ 2 chrXI:202819-203314 1.71e-05 24_[-1(1.10e-09)]_51 chrXI:219558-220555 9.80e-01 100 chrXI:302685-303247 5.95e-02 1_[+2(6.90e-05)]_72 chrXI:307873-308453 4.29e-08 36_[+1(1.28e-11)]_39 chrXI:313154-313703 1.38e-10 5_[-3(8.64e-07)]_3_[+1(2.52e-07)]_\ 14_[-2(3.93e-07)]_6 chrXI:322460-322687 5.01e-01 100 chrXI:326093-327470 6.36e-02 100 chrXI:379440-379919 1.81e-05 [-2(6.03e-05)]_23_[+2(1.25e-09)]_23 chrXI:382200-382466 6.62e-03 100 chrXI:385586-385995 3.76e-01 100 chrXI:430505-431668 1.38e-01 9_[-2(9.90e-05)]_64 chrXI:451878-452408 1.90e-03 2_[-3(1.69e-06)]_78 chrXI:458341-458961 7.42e-03 38_[-1(6.90e-05)]_37 chrXI:487654-487938 6.55e-01 100 chrXI:490678-491476 1.42e-01 28_[+3(5.96e-05)]_52 chrXI:513025-514426 2.50e-03 4_[+3(9.99e-06)]_76 chrXI:517759-518110 7.95e-01 100 chrXI:578716-579436 7.30e-10 3_[-1(2.75e-09)]_40_[-3(2.82e-08)]_\ 12 chrXI:617996-619286 1.49e-02 55_[+3(2.33e-06)]_25 chrXI:665664-666795 3.67e-01 100 chrXII:5-280 2.57e-04 42_[-3(1.69e-07)]_38 chrXII:5440-5943 5.48e-01 100 chrXII:10993-11984 4.24e-01 100 chrXII:39842-40477 6.29e-01 100 chrXII:48688-49162 1.97e-04 [-3(1.72e-08)]_80 chrXII:72989-73599 8.59e-01 100 chrXII:84131-84465 4.00e-01 100 chrXII:92282-92929 7.73e-07 64_[-1(7.52e-11)]_11 chrXII:127149-128090 1.51e-01 100 chrXII:167664-168308 1.40e-11 13_[+1(4.02e-08)]_24_[-2(3.08e-11)]_\ 11 chrXII:214619-215175 1.21e-10 14_[-3(6.92e-06)]_7_[+1(4.34e-12)]_\ 34 chrXII:241549-242027 8.10e-02 100 chrXII:260855-261413 3.06e-01 100 chrXII:262839-263941 4.10e-02 100 chrXII:282106-283595 3.44e-01 100 chrXII:331757-332579 6.68e-02 100 chrXII:366014-366552 4.43e-01 100 chrXII:374197-374605 9.65e-10 3_[+2(2.94e-08)]_15_[-1(3.81e-09)]_\ 30 chrXII:384277-384824 3.19e-01 100 chrXII:426889-427524 2.62e-05 16_[-1(2.21e-07)]_59 chrXII:448111-448973 2.65e-01 100 chrXII:459632-460678 5.94e-01 100 chrXII:468758-468983 1.66e-02 34_[+2(1.32e-05)]_1_[+2(1.52e-05)]_\ 11 chrXII:489288-489560 2.97e-02 16_[+2(1.32e-05)]_1_[+2(1.52e-05)]_\ 29 chrXII:498283-499697 2.36e-02 17_[+1(4.49e-05)]_58 chrXII:522135-522454 2.21e-01 100 chrXII:581550-581975 8.33e-01 100 chrXII:592281-593133 3.34e-01 100 chrXII:604910-605672 1.92e-09 41_[-3(5.38e-07)]_3_[+1(1.57e-09)]_\ 11 chrXII:628076-628636 4.10e-01 100 chrXII:656710-657215 1.26e-14 27_[+1(2.71e-10)]_15_[-2(2.63e-12)]_\ 6 chrXII:673161-674350 7.05e-01 100 chrXII:687662-688173 4.66e-06 38_[-2(1.25e-09)]_35 chrXII:712864-713653 3.28e-01 100 chrXII:731902-732268 3.78e-06 54_[+2(3.87e-10)]_19 chrXII:734701-735012 2.54e-07 38_[-1(4.75e-11)]_37 chrXII:781014-781903 3.95e-01 100 chrXII:784116-784573 6.76e-08 59_[+2(7.58e-11)]_14 chrXII:793687-795260 9.03e-03 100 chrXII:796371-797449 2.32e-03 54_[-3(1.30e-05)]_26 chrXII:818484-820155 7.66e-01 100 chrXII:837751-839200 7.89e-01 100 chrXII:875191-875625 2.00e-04 17_[+2(1.53e-08)]_56 chrXII:897577-899650 6.69e-01 100 chrXII:921742-922594 1.12e-01 46_[-2(8.69e-05)]_27 chrXII:932062-932552 6.48e-01 100 chrXII:962833-963519 3.58e-01 100 chrXII:975753-976270 8.36e-12 4_[-3(4.43e-05)]_3_[+1(1.27e-08)]_\ 16_[-2(7.60e-09)]_5 chrXII:1017630-1019425 7.53e-01 100 chrXII:1027372-1028587 5.11e-03 53_[+3(7.95e-05)]_27 chrXII:1051903-1052428 6.31e-07 2_[-2(3.71e-11)]_71 chrXII:1064050-1065379 5.84e-01 100 chrXIII:5296-5813 9.72e-01 100 chrXIII:14506-15138 4.77e-01 100 chrXIII:91617-92109 4.78e-01 100 chrXIII:123269-124732 7.49e-02 51_[+3(3.80e-05)]_29 chrXIII:131401-132301 1.63e-12 5_[-3(2.87e-06)]_4_[+1(5.23e-10)]_\ 14_[-2(4.98e-07)]_5 chrXIII:145773-146298 1.39e-03 28_[+3(2.33e-06)]_52 chrXIII:168590-169048 8.73e-04 25_[+2(9.11e-07)]_48 chrXIII:183770-184198 4.36e-05 7_[-2(1.08e-08)]_66 chrXIII:195664-196409 1.50e-03 64_[-3(5.73e-06)]_16 chrXIII:224052-224413 6.82e-01 100 chrXIII:225238-226685 3.73e-01 100 chrXIII:236416-236950 2.92e-05 16_[+3(2.06e-09)]_64 chrXIII:251371-252027 6.39e-02 8_[-3(4.43e-05)]_72 chrXIII:258994-259525 5.39e-08 3_[-2(3.08e-11)]_70 chrXIII:267640-268384 5.01e-01 100 chrXIII:290485-291116 4.80e-02 50_[+2(5.64e-05)]_23 chrXIII:296278-298996 7.91e-01 100 chrXIII:302878-303113 1.63e-01 100 chrXIII:320959-321326 9.34e-08 39_[-3(7.95e-05)]_1_[+1(2.71e-10)]_\ 15 chrXIII:352067-352542 1.67e-04 25_[+2(1.53e-08)]_48 chrXIII:362834-363328 4.37e-07 32_[+2(3.93e-07)]_14_[-1(2.52e-07)]_\ 2 chrXIII:372179-372732 1.37e-07 45_[+1(1.28e-11)]_30 chrXIII:378884-379659 4.04e-03 70_[-3(1.88e-06)]_10 chrXIII:392334-392974 5.36e-01 100 chrXIII:420312-420861 5.17e-08 57_[+1(1.28e-11)]_18 chrXIII:463264-463877 2.22e-06 33_[+2(3.01e-06)]_14_[-1(2.21e-07)]_\ 1 chrXIII:480148-480899 2.20e-01 100 chrXIII:504661-505236 9.10e-01 100 chrXIII:550489-553355 3.86e-01 100 chrXIII:572698-573352 2.71e-02 26_[-3(1.42e-05)]_54 chrXIII:586371-586918 2.77e-07 47_[+1(1.28e-11)]_28 chrXIII:650710-651725 3.86e-01 100 chrXIII:730810-733611 5.85e-01 100 chrXIII:742354-743105 8.17e-01 100 chrXIII:747746-748155 1.68e-04 36_[-2(4.98e-07)]_37 chrXIII:754399-754948 9.44e-01 100 chrXIII:767991-768657 7.86e-01 100 chrXIII:807682-808558 2.31e-02 78_[+3(4.72e-06)]_2 chrXIII:837693-838481 2.46e-01 100 chrXIII:901555-902015 2.91e-01 100 chrXIII:923408-924361 4.28e-01 100 chrXIV:6488-7178 7.26e-01 100 chrXIV:19107-19677 1.33e-02 68_[+3(4.28e-06)]_12 chrXIV:62007-64561 4.38e-01 100 chrXIV:89011-90384 2.39e-02 75_[-3(1.84e-05)]_5 chrXIV:96026-96629 2.67e-04 8_[-2(5.44e-08)]_3_[+2(1.10e-05)]_\ 35 chrXIV:102490-102992 6.13e-10 24_[+2(7.60e-09)]_16_[-1(1.27e-08)]_\ 8 chrXIV:104569-105237 2.38e-01 100 chrXIV:241103-241779 3.71e-01 100 chrXIV:330310-331114 6.94e-01 100 chrXIV:374615-375538 5.41e-01 100 chrXIV:442735-443253 4.91e-05 61_[+2(7.60e-09)]_12 chrXIV:443453-444817 6.09e-02 9_[-3(4.43e-05)]_71 chrXIV:470924-471658 1.33e-02 37_[-3(2.59e-06)]_43 chrXIV:493984-495651 8.28e-01 100 chrXIV:499242-500749 9.49e-01 100 chrXIV:546936-547437 6.74e-07 29_[-1(7.52e-11)]_46 chrXIV:560110-561178 1.78e-01 100 chrXIV:567890-568624 4.02e-03 48_[+3(6.06e-07)]_32 chrXIV:569599-570158 3.14e-10 21_[-3(2.33e-06)]_3_[+1(4.75e-11)]_\ 31 chrXIV:585519-586569 2.10e-01 100 chrXIV:602097-602549 3.43e-07 38_[+2(3.71e-11)]_35 chrXIV:631522-632143 2.82e-12 36_[-3(1.30e-05)]_13_[+1(1.68e-14)]_\ 6 chrXIV:632375-632913 5.24e-13 4_[+2(7.60e-09)]_16_[-1(1.27e-08)]_\ 2_[+3(2.33e-06)]_6 chrXIV:716059-716589 3.72e-01 100 chrXIV:725879-726413 1.19e-06 17_[-3(1.69e-06)]_6_[+1(1.69e-07)]_\ 32 chrXIV:783486-784315 3.76e-01 100 chrXV:6-987 6.47e-01 100 chrXV:44814-45195 2.47e-01 100 chrXV:79567-80153 7.21e-01 100 chrXV:92144-94875 2.22e-01 100 chrXV:109602-110013 2.00e-01 100 chrXV:110842-111261 3.27e-04 5_[-2(5.44e-08)]_68 chrXV:113498-114195 6.30e-15 5_[+2(3.32e-10)]_15_[-1(2.47e-09)]_\ 3_[+3(2.59e-06)]_5 chrXV:161083-161436 5.99e-01 100 chrXV:167554-168548 9.71e-01 100 chrXV:201150-201908 3.22e-01 100 chrXV:216218-216703 4.35e-01 100 chrXV:226358-226933 9.75e-12 21_[+1(7.52e-11)]_13_[-2(1.08e-08)]_\ 14 chrXV:228055-228638 7.80e-05 34_[+2(7.60e-09)]_39 chrXV:252205-254127 2.07e-01 100 chrXV:273540-273840 9.91e-01 100 chrXV:274262-275073 8.24e-07 55_[+2(7.58e-11)]_18 chrXV:281492-282553 1.04e-01 100 chrXV:287996-288414 5.18e-03 36_[+2(9.11e-07)]_37 chrXV:300845-301441 2.16e-11 3_[+2(2.64e-08)]_44_[-1(7.52e-11)]_\ 1 chrXV:340088-340609 6.92e-10 6_[+1(3.81e-09)]_15_[-2(2.94e-08)]_\ 27 chrXV:353878-354338 6.57e-06 28_[-2(3.32e-10)]_45 chrXV:438443-439032 5.56e-06 20_[-1(2.75e-09)]_55 chrXV:464223-465038 6.31e-03 10_[+3(1.36e-06)]_70 chrXV:486842-487757 5.49e-01 100 chrXV:505087-505510 9.77e-01 100 chrXV:571649-572167 3.03e-01 100 chrXV:594205-594664 2.17e-04 14_[-2(6.01e-08)]_59 chrXV:616693-617345 6.12e-03 59_[-3(1.69e-06)]_21 chrXV:663513-664166 2.12e-13 28_[+1(1.28e-11)]_16_[-2(1.25e-09)]_\ 4 chrXV:677972-679219 3.02e-03 52_[+3(4.20e-07)]_28 chrXV:710006-710531 8.90e-07 23_[-1(1.37e-07)]_26_[+3(1.52e-06)]_\ 6 chrXV:712198-712851 9.70e-01 100 chrXV:732785-733603 1.27e-02 71_[+3(7.95e-05)]_9 chrXV:738220-738558 4.08e-01 100 chrXV:779679-780998 6.46e-01 100 chrXV:832386-832988 7.90e-01 100 chrXV:853977-854463 5.56e-16 22_[+1(4.34e-12)]_15_[-2(6.31e-12)]_\ 11 chrXV:866492-868099 1.50e-01 100 chrXV:968133-968456 6.98e-01 100 chrXV:976179-976675 1.12e-03 43_[+2(1.07e-07)]_30 chrXV:978820-979139 7.43e-01 100 chrXV:980469-981058 2.09e-07 43_[-1(7.52e-11)]_32 chrXV:1003965-1004462 7.49e-01 100 chrXV:1025679-1026576 6.12e-01 100 chrXV:1027591-1029176 4.13e-01 100 chrXVI:55815-56531 9.43e-07 51_[+1(2.63e-08)]_24 chrXVI:68985-69512 1.31e-02 26_[-3(4.28e-06)]_54 chrXVI:75475-76788 2.48e-03 73_[+2(3.82e-06)] chrXVI:88350-88955 7.24e-02 33_[-2(9.59e-05)]_40 chrXVI:99305-99674 2.00e-03 12_[-3(7.60e-06)]_68 chrXVI:153357-154230 7.61e-01 100 chrXVI:188132-189132 8.27e-01 100 chrXVI:210001-210505 3.51e-02 33_[-2(5.64e-05)]_40 chrXVI:280596-282953 1.54e-02 62_[+3(4.28e-06)]_18 chrXVI:302557-304225 1.10e-01 39_[-2(6.45e-05)]_34 chrXVI:338581-339166 1.43e-07 1_[-3(1.52e-06)]_9_[+1(1.37e-07)]_\ 45 chrXVI:360027-360382 7.55e-01 100 chrXVI:378649-379000 3.93e-01 100 chrXVI:404563-405855 6.38e-01 100 chrXVI:406179-407738 5.34e-01 100 chrXVI:435454-436198 9.91e-01 100 chrXVI:520123-520542 1.11e-01 100 chrXVI:559992-560504 1.62e-09 5_[+1(1.68e-08)]_34_[-2(1.53e-08)]_\ 9 chrXVI:572025-572800 4.01e-02 43_[+3(7.95e-05)]_37 chrXVI:581816-582310 1.06e-05 48_[+2(1.43e-09)]_25 chrXVI:622238-622867 2.04e-05 43_[+1(1.68e-08)]_32 chrXVI:689337-690226 2.64e-01 100 chrXVI:699869-700721 8.37e-01 100 chrXVI:731587-733187 7.24e-01 100 chrXVI:744031-744643 7.76e-05 37_[-1(3.12e-08)]_38 chrXVI:745900-746921 5.54e-01 100 chrXVI:768752-769516 2.38e-01 100 chrXVI:775647-776195 9.21e-01 100 chrXVI:794431-794809 1.82e-01 100 chrXVI:810469-810879 3.25e-05 51_[+2(7.60e-09)]_22 chrXVI:819328-819852 3.23e-07 31_[-1(4.75e-11)]_44 chrXVI:856750-857121 6.03e-15 16_[+2(2.63e-12)]_15_[-1(2.71e-10)]_\ 17 chrXVI:860112-860662 5.71e-05 41_[+2(1.08e-08)]_32 chrXVI:880055-880589 2.80e-18 2_[-3(3.70e-07)]_7_[+1(4.75e-11)]_\ 16_[-2(3.71e-11)]_3 chrXVI:882750-883614 3.98e-03 22_[-3(3.17e-06)]_58 chrXVI:910843-911800 1.02e-01 100 chrXVI:918787-919155 5.75e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************