******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--SOK2/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrII:326600-327078 1.0000 100 chrVIII:103874-104275 1.0000 100 chrXV:24408-25087 1.0000 100 chrVI:269837-270159 1.0000 100 chrXI:108755-109058 1.0000 100 chrI:81937-82263 1.0000 100 chrIV:1344942-1345801 1.0000 100 chrXVI:828789-829454 1.0000 100 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chrXIV:567924-568494 1.0000 100 chrII:642867-643255 1.0000 100 chrIV:27-351 1.0000 100 chrXV:989010-989605 1.0000 100 chrV:377850-378665 1.0000 100 chrXI:518651-519353 1.0000 100 chrXVI:770567-771098 1.0000 100 chrVII:706900-707328 1.0000 100 chrX:22712-22812 1.0000 100 chrVIII:466787-467249 1.0000 100 chrXV:854043-854421 1.0000 100 chrX:90086-90186 1.0000 100 chrXI:379489-379918 1.0000 100 chrVII:986759-987878 1.0000 100 chrXIII:5351-5763 1.0000 100 chrVIII:505846-506175 1.0000 100 chrVIII:381458-383333 1.0000 100 chrVIII:115113-116361 1.0000 100 chrV:6164-6666 1.0000 100 chrXI:313168-313646 1.0000 100 chrXII:728091-728739 1.0000 100 chrX:181909-182009 1.0000 100 chrXIII:131569-132079 1.0000 100 chrX:414812-414912 1.0000 100 chrXIII:420106-420843 1.0000 100 chrI:185654-186092 1.0000 100 chrXIV:725909-726382 1.0000 100 chrXVI:566882-567229 1.0000 100 chrV:435571-435996 1.0000 100 chrVI:19304-19940 1.0000 100 chrXII:975809-976217 1.0000 100 chrIV:645020-645361 1.0000 100 chrIV:355169-357795 1.0000 100 chrXI:385132-385494 1.0000 100 chrVII:828469-828967 1.0000 100 chrXV:980507-981003 1.0000 100 chrI:189763-190663 1.0000 100 chrVII:677783-678068 1.0000 100 chrXV:232091-232406 1.0000 100 chrIII:298956-299443 1.0000 100 chrXII:673141-674528 1.0000 100 chrIV:541194-542032 1.0000 100 chrIX:68232-68505 1.0000 100 chrXVI:794492-796085 1.0000 100 chrVIII:521790-522333 1.0000 100 chrIV:802562-802964 1.0000 100 chrV:569437-570103 1.0000 100 chrIV:619736-620202 1.0000 100 chrVI:221763-222047 1.0000 100 chrVII:533788-535197 1.0000 100 chrXIII:352108-352534 1.0000 100 chrV:61005-62139 1.0000 100 chrI:138972-139337 1.0000 100 chrVII:310515-312264 1.0000 100 chrXI:517796-518306 1.0000 100 chrXI:581042-581365 1.0000 100 chrXI:162326-162705 1.0000 100 chrXII:424033-424523 1.0000 100 chrXV:27488-28148 1.0000 100 chrXI:46326-46987 1.0000 100 chrV:42098-42547 1.0000 100 chrXIII:463340-463869 1.0000 100 chrXIV:495212-495638 1.0000 100 chrXII:234514-235021 1.0000 100 chrIII:127552-127913 1.0000 100 chrXV:80413-83455 1.0000 100 chrIII:82387-82749 1.0000 100 chrIV:1461518-1462038 1.0000 100 chrXVI:404145-406041 1.0000 100 chrVII:254154-254716 1.0000 100 chrVII:479156-482965 1.0000 100 chrXVI:425241-425665 1.0000 100 chrXIV:351545-352935 1.0000 100 chrIV:1300250-1301306 1.0000 100 chrXI:74444-74948 1.0000 100 chrV:53540-53913 1.0000 100 chrX:745109-745209 1.0000 100 chrIV:545962-546458 1.0000 100 chrIV:519584-519908 1.0000 100 chrXII:568035-570837 1.0000 100 chrXI:93733-94101 1.0000 100 chrII:9392-9851 1.0000 100 chrXIII:650796-653066 1.0000 100 chrXIII:826480-826886 1.0000 100 chrVI:95481-95938 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--SOK2/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--SOK2/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--SOK2/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.291 C 0.209 G 0.209 T 0.291 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--SOK2/background): A 0.305 C 0.195 G 0.195 T 0.305 ******************************************************************************** ******************************************************************************** MOTIF GGRRTCGAACCSVKGAYCTYMNGRTT MEME-1 width = 26 sites = 108 llr = 2058 E-value = 4.5e-456 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGRRTCGAACCSVKGAYCTYMNGRTT MEME-1 Description -------------------------------------------------------------------------------- Simplified A 2:54:::aa::13:37:::132:51: pos.-specific C :::2:8:::a7531::6724532211 probability G 7a53::a::::43581:1::128312 matrix T :::2a2::::2::3:2417423::87 bits 2.4 * * * 2.1 * * * 1.9 * * * 1.6 * * **** * Relative 1.4 * ****** * * Entropy 1.2 ** ******* * * * (27.5 bits) 0.9 *** ******** * ** * 0.7 *** ******** * *** * * 0.5 *** **************** **** 0.2 *** ***************** **** 0.0 -------------------------- Multilevel GGAATCGAACCCCGGACCTTCCGATT consensus A GG T TGGTATT CCATCG sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRRTCGAACCSVKGAYCTYMNGRTT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------------- chrXI:162326-162705 + 33 8.24e-12 ACTCACGATG GGGGTCGAACCCATAATCTTCTGATT AGAAGTCAGA chrVII:828469-828967 + 66 8.24e-12 ACTCACGATG GGGGTCGAACCCATAATCTTCTGATT AGAAGTCAG chrXIII:131569-132079 + 62 8.24e-12 ACTCACGATG GGGGTCGAACCCATAATCTTCTGATT AGAAGTCAGA chrVII:736204-736541 - 53 8.24e-12 ACTCACGATG GGGGTCGAACCCATAATCTTCTGATT AGAAGTCAGA chrX:355171-355271 - 11 8.24e-12 ACTCACGATG GGGGTCGAACCCATAATCTTCTGATT AGAAGTCAGA chrXIII:747737-748134 + 18 8.24e-12 ACTCACGATG GGGGTCGAACCCATAATCTTCTGATT AGAAGTCAGA chrVII:405312-405704 - 47 8.24e-12 ACTCACGATG GGGGTCGAACCCATAATCTTCTGATT AGAAGTCAGA chrX:374223-374323 + 32 8.24e-12 ACTCACGATG GGGGTCGAACCCATAATCTTCTGATT AGAAGTCAGA chrIV:568698-569208 - 14 8.24e-12 ACTCACGATG GGGGTCGAACCCATAATCTTCTGATT AGAAGTCAGA chrIX:210533-210920 - 26 9.75e-12 GGTCTCTAGC GGGATCGAACCGCTGATCCCCGCGTT ATTAGCACGG chrXVI:880071-880561 + 41 9.75e-12 GGTCTCTAGC GGGATCGAACCGCTGATCCCCGCGTT ATTAGCACGG chrXIV:569670-570128 + 29 9.75e-12 GGTCTCTAGC GGGATCGAACCGCTGATCCCCGCGTT ATTAGCACGG chrXIV:602127-602547 - 62 9.75e-12 GGTCTCTAGC GGGATCGAACCGCTGATCCCCGCGTT ATTAGCACGG chrIX:183305-183680 + 9 9.75e-12 TCTCTAGC GGGATCGAACCGCTGATCCCCGCGTT ATTAGCACGG chrIV:667761-668232 + 72 9.75e-12 GGTCTCTAGC GGGATCGAACCGCTGATCCCCGCGTT ATT chrV:435571-435996 + 30 1.15e-11 GCCCTGTAGG GGGCTCGAACCCCTAACCTTATGATT AAGAGTCATA chrX:414812-414912 - 30 1.15e-11 GCCCTGTAGG GGGCTCGAACCCCTAACCTTATGATT AAGAGTCATA chrIV:1201520-1202108 - 22 1.15e-11 GCCCTGTAGG GGGCTCGAACCCCTAACCTTATGATT AAGAGTCATA chrXVI:581851-582311 - 67 1.15e-11 CCTGTAGG GGGCTCGAACCCCTAACCTTATGATT AAGAGTCATA chrIV:1352339-1352698 + 9 1.15e-11 CCTGTAGG GGGCTCGAACCCCTAACCTTATGATT AAGAGTCATA chrVII:185536-185955 + 30 1.15e-11 GCCCTGTAGG GGGCTCGAACCCCTAACCTTATGATT AAGAGTCATA chrXIII:480391-480830 + 72 1.15e-11 GCCCTGTAGG GGGCTCGAACCCCTAACCTTATGATT AAG chrIX:300051-300472 + 28 1.15e-11 GCCCTGTAGG GGGCTCGAACCCCTAACCTTATGATT AAGAGTCATA chrVII:122048-122523 - 70 1.15e-11 GTAGG GGGCTCGAACCCCTAACCTTATGATT AAGAGTCATA chrXI:202848-203301 - 11 1.15e-11 GCCCTGTAGG GGGCTCGAACCCCTAACCTTATGATT AAGAGTCATA chrXV:854043-854421 + 16 3.97e-11 GGACGCAACC GGAATCGAACCGATGACCTCTTCCTT GCAAGGGAAG chrI:166066-166560 - 40 3.97e-11 GGACGCAACC GGAATCGAACCGATGACCTCTTCCTT GCAAGGGAAG chrXII:214702-215139 + 24 3.97e-11 GGACGCAACC GGAATCGAACCGATGACCTCTTCCTT GCAAGGGAAG chrXVI:572059-572575 - 36 8.09e-11 GCGCAAGCCC GGAATCGAACCGGGGGCCCAACGATG GCAACGTTGG chrV:487121-487626 + 19 8.09e-11 TCCGATACGG GGAGTCGAACCCCGGTCTCCACGGTG AAAGCGTGAT chrIX:370243-370625 - 68 8.09e-11 GATACGG GGAGTCGAACCCCGGTCTCCACGGTG AAAGCGTGAT chrVII:541634-542147 - 45 8.09e-11 TCCGATACGG GGAGTCGAACCCCGGTCTCCACGGTG AAAGCGTGAT chrVII:845482-845912 - 36 8.09e-11 GCGCAAGCCC GGAATCGAACCGGGGGCCCAACGATG GCAACGTTGG chrXV:226465-226857 + 11 8.09e-11 GCGCAAGCCC GGAATCGAACCGGGGGCCCAACGATG GCAACGTTGG chrV:176915-177406 - 24 8.09e-11 TCCGATACGG GGAGTCGAACCCCGGTCTCCACGGTG AAAGCGTGAT chrX:396580-396680 + 23 8.09e-11 GCGCAAGCCC GGAATCGAACCGGGGGCCCAACGATG GCAACGTTGG chrIX:197432-197801 - 61 8.09e-11 TCCGAAGCGG GGAGTCGAACCCCGGTCTCCACGGTG AGAACGTGAT chrXIII:290587-291151 - 17 8.09e-11 TCCGCTACGG GGAGTCGAACCCCGGTCTCCACGGTG AAAGCGTGAT chrVII:401384-401751 + 21 8.09e-11 TCCGATACGG GGAGTCGAACCCCGGTCTCCACGGTG AAAGCGTGAT chrX:531620-531720 - 20 8.09e-11 GCGCAAGCCC GGAATCGAACCGGGGGCCCAACGATG GCAACGTTGG chrIV:83351-83791 - 61 8.09e-11 GCGCAAGCCC GGAATCGAACCGGGGGCCCAACGATG GCAACGTTGG chrX:115700-115800 + 49 8.09e-11 TCCGATACGG GGAGTCGAACCCCGGTCTCCACGGTG AAAGCGTGAT chrII:645021-645393 - 45 8.09e-11 TCCGATACGG GGAGTCGAACCCCGGTCTCCACGGTG AAAGCGTGAT chrIV:802562-802964 + 29 1.80e-10 GGTCCTACCC GGATTCGAACCGGGGTTGTCCGGATC AAAACCGAAA chrIV:645020-645361 + 24 1.80e-10 GGTCCTACCC GGATTCGAACCGGGGTTGTCCGGATC AAAACCGAAA chrVIII:134100-134585 - 64 1.80e-10 GGTCCTACCC GGATTCGAACCGGGGTTGTCCGGATC AAAACCGAAA chrII:350619-351145 - 30 1.80e-10 GGTCTTACCC GGATTCGAACCGGGGTTGTCCGGATC AAAACCGAAA chrIII:168135-168567 + 11 1.80e-10 GGTCCTACCC GGATTCGAACCGGGGTTGTCCGGATC AAAACCGAAA chrV:250123-250534 - 43 1.80e-10 GGTCCTACCC GGATTCGAACCGGGGTTGTCCGGATC AAAACCGAAA chrXII:448377-448926 + 60 1.80e-10 GGTCCTACCC GGATTCGAACCGGGGTTGTCCGGATC AAAACCGAAA chrV:130858-131373 + 28 2.96e-10 GGTCTTACCC GGATTCGAACCGGGGTTGTTCGGATC AAAACCGAAA chrXIV:104622-105100 - 30 3.77e-10 GCTTCCAATC GGATTTGAACCGATGATCTCCACATT ACTAGTGTGG chrIV:434039-434514 + 49 3.77e-10 GCTTCCAATC GGATTTGAACCGATGATCTCCACATT ACTAGTGTGG chrIII:295292-295824 - 12 3.77e-10 GCTTCCAATC GGATTTGAACCGATGATCTCCACATT ACTAGTGTGG chrII:266199-266643 - 43 3.77e-10 GCTTCCAATC GGATTTGAACCGATGATCTCCACATT ACTAGTGTGG chrXV:980507-981003 - 46 7.53e-10 GGGCGAGCTG GGAATTGAACCCAGGGCCTCTCGCAT GCTTTGTTCC chrXIV:567924-568494 - 22 7.53e-10 GGGCGAGCTG GGAATTGAACCCAGGGCCTCTCGCAT GCTTTGTCTT chrVIII:388672-389183 + 27 7.53e-10 GGGCGAGCTG GGAATTGAACCCAGGGCCTCTCGCAT GCTTTGTCTT chrXV:300878-301408 - 69 7.53e-10 GAGCTG GGAATTGAACCCAGGGCCTCTCGCAT GCTTTGTCCC chrXIV:546966-547397 - 29 7.53e-10 GGGCGAGCTG GGAATTGAACCCAGGGCCTCTCGCAT GCTTTGTCTT chrX:538363-538463 - 21 9.39e-10 GTTCCGTACG GGACTCGAACCCGCAGTCTTCTCCTT AGGAGGGAGA chrXI:379489-379918 - 64 1.16e-09 GATTTCGCCC AGGATCGAACTGGGGACGTTCTGCGT GTTAAGCAGA chrXII:687664-688144 + 16 1.16e-09 GATTTCGCCC AGGATCGAACTGGGGACGTTCTGCGT GTTAAGCAGA chrXIII:372201-372696 + 58 1.16e-09 GATTTCGCCC AGGATCGAACTGGGGACGTTCTGCGT GTTAAGCAGA chrXI:307971-308410 + 15 1.16e-09 GATTTCGCCC AGGATCGAACTGGGGACGTTCTGCGT GTTAAGCAGA chrVII:412147-412555 + 4 1.16e-09 CCC AGGATCGAACTGGGGACGTTCTGCGT GTTAAGCAGA chrV:469287-469692 - 55 1.16e-09 GATTTCGCCC AGGATCGAACTGGGGACGTTCTGCGT GTTAAGCAGA chrXIII:807974-808525 + 58 1.60e-09 GGTCCCACCC GGATTCGAACTGGGGTTGTTCGGATC AGAACCGAAA chrXI:517796-518306 - 23 1.77e-09 GGACGAGTCC GGAATCGAACCGGAGACCTCTCCCAT GCTAAGGGAG chrVII:774158-774626 - 43 1.77e-09 GGACGAGTCC GGAATCGAACCGGAGACCTCTCCCAT GCTAAGGGAG chrIV:410206-410689 - 18 1.77e-09 GGACGAGTCC GGAATCGAACCGGAGACCTCTCCCAT GCTAAGGGAG chrXIII:320968-321320 + 64 1.77e-09 GGACGAGTCC GGAATCGAACCGGAGACCTCTCCCAT GCTAAGGGAG chrIV:619736-620202 + 61 2.64e-09 TTCCCCGCCA GGACTTGAACCTGGAATCTTCTGGTT CGTAGCCAGA chrVIII:475517-475905 + 56 2.64e-09 GTTCCAACCG AGGATCGAACTCGGGACCTTTGCCGT GTGAAGGCAA chrXV:340121-340543 + 28 2.64e-09 TTCCCCGCCA GGACTTGAACCTGGAATCTTCTGGTT CGTAGCCAGA chrXVI:769010-769465 + 31 2.64e-09 TCCTCATAGG GGGCTCGAACCCCTGACATTTCGGTA TCCTTGCTTA chrXII:875224-875632 - 57 2.64e-09 TCCTCATAGG GGGCTCGAACCCCTGACATTTCGGTA TCCTTGCTTA chrXI:490780-491229 - 50 2.64e-09 TTCCCCGCCA GGACTTGAACCTGGAATCTTCTGGTT CGTAGCCAGA chrXI:578782-579271 - 48 2.64e-09 TCCTCATAGG GGGCTCGAACCCCTGACATTTCGGTA TCCTTGCTTA chrX:422710-422810 - 31 3.20e-09 GCTCCAGGGG AGGTTCGAACTCTCGACCTTCAGATT ATGAGACTGA chrXIII:837747-838228 - 43 3.20e-09 CTCCCGGGGG CGAGTCGAACGCCCGATCTCAAGATT TCGTAGTGGT chrXIII:572755-573111 + 11 3.20e-09 GCTCCAGGGG AGGTTCGAACTCTCGACCTTCAGATT ATGAGACTGA chrX:390843-390943 + 31 3.20e-09 GCTCCAGGGG AGGTTCGAACTCTCGACCTTCAGATT ATGAGACTGA chrX:354053-354153 - 72 3.20e-09 GGG CGAGTCGAACGCCCGATCTCAAGATT TCGTAGTGGT chrIV:946162-946605 - 31 3.20e-09 CTCCCGGGGG CGAGTCGAACGCCCGATCTCAAGATT TCGTAGTGAT chrVI:167289-167664 - 63 3.20e-09 CTCCCGGGGG CGAGTCGAACGCCCGATCTCAAGATT TCGTAGTGGT chrVI:210476-210869 + 8 3.20e-09 CCGGGGG CGAGTCGAACGCCCGATCTCAAGATT TCGTAGTGGT chrII:326600-327078 + 14 3.20e-09 GATCCAACCG AGGTTCGAACTCGGGATCTTCGCCGT GTAAAGGCGA chrXI:74444-74948 - 15 4.24e-09 GACCCCAGTG AGGGTTGAACTCACGATCTTGCGATT AACAGTCGCA chrIII:127552-127913 - 71 4.24e-09 AGTG AGGGTTGAACTCACGATCTTGCGATT AACAGTCGCA chrXII:975809-976217 + 31 4.24e-09 GACCCCAGTG AGGGTTGAACTCACGATCTTGCGATT AACAGTCGCA chrVII:730978-731366 - 52 4.24e-09 GACCCCAGTG AGGGTTGAACTCACGATCTTGCGATT AACAGTCGCA chrVI:137274-137773 + 24 4.24e-09 GACCCCAGTG AGGGTTGAACTCACGATCTTGCGATT AACAGTCGCA chrXIV:632429-632882 - 31 4.24e-09 GACCCCAGTG AGGGTTGAACTCACGATCTTGCGATT AACAGTCGCA chrVII:706900-707328 + 55 1.66e-08 GCTCGCACTC AGGATCGAACTAAGGACCAACAGATT TGCAATCTGC chrII:642867-643255 + 7 1.66e-08 GCACTC AGGATCGAACTAAGGACCAACAGATT TGCAATCTGC chrXVI:775607-776029 + 8 1.66e-08 CGCACTC AGGATCGAACTAAGGACCAACAGATT TGCAATCTGC chrXVI:435655-436165 + 44 1.66e-08 GCTCGCACTC AGGATCGAACTAAGGACCAACAGATT TGCAATCTGC chrVIII:466787-467249 - 57 3.04e-08 GCCACCTGCC AGAATTGAACTAGCGACCTTTGCATT ACAAGTGCAA chrXIII:352108-352534 - 63 6.87e-08 GCGAATTCTG TGGATCGAACACAGGACCTCCAGATA ACTTGACCGA chrXI:313168-313646 + 55 1.67e-07 GCCATCTCCT AGAATCGAACCAGGGTTTCATCGGCC ACAACGATGT chrXIII:362865-363303 - 65 1.67e-07 GCCATCTCCT AGAATCGAACCAGGGTTTCATCGGCC ACAACGATGT chrVII:110425-110899 + 24 1.67e-07 GCCATCTCCT AGAATCGAACCAGGGTTTCATCGGCC ACAACGATGT chrX:517668-517768 + 7 1.97e-07 CCGCTC GGTTTCGATCCGAGGACATCAGGGTT ATGAGCCCTG chrXIII:463340-463869 - 35 3.12e-07 TCCGCGACGG GGAATTGAACCCCGATCTGGCACGCG ACAAGCGCCC chrIX:336112-336615 + 47 3.12e-07 TCCGCGACGG GGAATTGAACCCCGATCTGGCACGCG ACAAGCGCCC chrX:204524-204624 - 71 3.12e-07 ACGG GGAATTGAACCCCGATCTGGCACGCG ACAAGCGCCC chrXII:426933-427404 - 49 3.12e-07 TCCGCGACGG GGAATTGAACCCCGATCTGGCACGCG ACAAGCGCCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRRTCGAACCSVKGAYCTYMNGRTT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXI:162326-162705 8.2e-12 32_[+1]_42 chrVII:828469-828967 8.2e-12 65_[+1]_9 chrXIII:131569-132079 8.2e-12 61_[+1]_13 chrVII:736204-736541 8.2e-12 52_[-1]_22 chrX:355171-355271 8.2e-12 10_[-1]_64 chrXIII:747737-748134 8.2e-12 17_[+1]_57 chrVII:405312-405704 8.2e-12 46_[-1]_28 chrX:374223-374323 8.2e-12 31_[+1]_43 chrIV:568698-569208 8.2e-12 13_[-1]_61 chrIX:210533-210920 9.7e-12 25_[-1]_49 chrXVI:880071-880561 9.7e-12 40_[+1]_34 chrXIV:569670-570128 9.7e-12 28_[+1]_46 chrXIV:602127-602547 9.7e-12 61_[-1]_13 chrIX:183305-183680 9.7e-12 8_[+1]_66 chrIV:667761-668232 9.7e-12 71_[+1]_3 chrV:435571-435996 1.1e-11 29_[+1]_45 chrX:414812-414912 1.1e-11 29_[-1]_45 chrIV:1201520-1202108 1.1e-11 21_[-1]_53 chrXVI:581851-582311 1.1e-11 66_[-1]_8 chrIV:1352339-1352698 1.1e-11 8_[+1]_66 chrVII:185536-185955 1.1e-11 29_[+1]_45 chrXIII:480391-480830 1.1e-11 71_[+1]_3 chrIX:300051-300472 1.1e-11 27_[+1]_47 chrVII:122048-122523 1.1e-11 69_[-1]_5 chrXI:202848-203301 1.1e-11 10_[-1]_64 chrXV:854043-854421 4e-11 15_[+1]_59 chrI:166066-166560 4e-11 39_[-1]_35 chrXII:214702-215139 4e-11 23_[+1]_51 chrXVI:572059-572575 8.1e-11 35_[-1]_39 chrV:487121-487626 8.1e-11 18_[+1]_56 chrIX:370243-370625 8.1e-11 67_[-1]_7 chrVII:541634-542147 8.1e-11 44_[-1]_30 chrVII:845482-845912 8.1e-11 35_[-1]_39 chrXV:226465-226857 8.1e-11 10_[+1]_64 chrV:176915-177406 8.1e-11 23_[-1]_51 chrX:396580-396680 8.1e-11 22_[+1]_52 chrIX:197432-197801 8.1e-11 60_[-1]_14 chrXIII:290587-291151 8.1e-11 16_[-1]_58 chrVII:401384-401751 8.1e-11 20_[+1]_54 chrX:531620-531720 8.1e-11 19_[-1]_55 chrIV:83351-83791 8.1e-11 60_[-1]_14 chrX:115700-115800 8.1e-11 48_[+1]_26 chrII:645021-645393 8.1e-11 44_[-1]_30 chrIV:802562-802964 1.8e-10 28_[+1]_46 chrIV:645020-645361 1.8e-10 23_[+1]_51 chrVIII:134100-134585 1.8e-10 63_[-1]_11 chrII:350619-351145 1.8e-10 29_[-1]_45 chrIII:168135-168567 1.8e-10 10_[+1]_64 chrV:250123-250534 1.8e-10 42_[-1]_32 chrXII:448377-448926 1.8e-10 59_[+1]_15 chrV:130858-131373 3e-10 27_[+1]_47 chrXIV:104622-105100 3.8e-10 29_[-1]_45 chrIV:434039-434514 3.8e-10 48_[+1]_26 chrIII:295292-295824 3.8e-10 11_[-1]_63 chrII:266199-266643 3.8e-10 42_[-1]_32 chrXV:980507-981003 7.5e-10 45_[-1]_29 chrXIV:567924-568494 7.5e-10 21_[-1]_53 chrVIII:388672-389183 7.5e-10 26_[+1]_48 chrXV:300878-301408 7.5e-10 68_[-1]_6 chrXIV:546966-547397 7.5e-10 28_[-1]_46 chrX:538363-538463 9.4e-10 20_[-1]_54 chrXI:379489-379918 1.2e-09 63_[-1]_11 chrXII:687664-688144 1.2e-09 15_[+1]_59 chrXIII:372201-372696 1.2e-09 57_[+1]_17 chrXI:307971-308410 1.2e-09 14_[+1]_60 chrVII:412147-412555 1.2e-09 3_[+1]_71 chrV:469287-469692 1.2e-09 54_[-1]_20 chrXIII:807974-808525 1.6e-09 57_[+1]_17 chrXI:517796-518306 1.8e-09 22_[-1]_52 chrVII:774158-774626 1.8e-09 42_[-1]_32 chrIV:410206-410689 1.8e-09 17_[-1]_57 chrXIII:320968-321320 1.8e-09 63_[+1]_11 chrIV:619736-620202 2.6e-09 60_[+1]_14 chrVIII:475517-475905 2.6e-09 55_[+1]_19 chrXV:340121-340543 2.6e-09 27_[+1]_47 chrXVI:769010-769465 2.6e-09 30_[+1]_44 chrXII:875224-875632 2.6e-09 56_[-1]_18 chrXI:490780-491229 2.6e-09 49_[-1]_25 chrXI:578782-579271 2.6e-09 47_[-1]_27 chrX:422710-422810 3.2e-09 30_[-1]_44 chrXIII:837747-838228 3.2e-09 42_[-1]_32 chrXIII:572755-573111 3.2e-09 10_[+1]_64 chrX:390843-390943 3.2e-09 30_[+1]_44 chrX:354053-354153 3.2e-09 71_[-1]_3 chrIV:946162-946605 3.2e-09 30_[-1]_44 chrVI:167289-167664 3.2e-09 62_[-1]_12 chrVI:210476-210869 3.2e-09 7_[+1]_67 chrII:326600-327078 3.2e-09 13_[+1]_61 chrXI:74444-74948 4.2e-09 14_[-1]_60 chrIII:127552-127913 4.2e-09 70_[-1]_4 chrXII:975809-976217 4.2e-09 30_[+1]_44 chrVII:730978-731366 4.2e-09 51_[-1]_23 chrVI:137274-137773 4.2e-09 23_[+1]_51 chrXIV:632429-632882 4.2e-09 30_[-1]_44 chrVII:706900-707328 1.7e-08 54_[+1]_20 chrII:642867-643255 1.7e-08 6_[+1]_68 chrXVI:775607-776029 1.7e-08 7_[+1]_67 chrXVI:435655-436165 1.7e-08 43_[+1]_31 chrVIII:466787-467249 3e-08 56_[-1]_18 chrXIII:352108-352534 6.9e-08 62_[-1]_12 chrXI:313168-313646 1.7e-07 54_[+1]_20 chrXIII:362865-363303 1.7e-07 64_[-1]_10 chrVII:110425-110899 1.7e-07 23_[+1]_51 chrX:517668-517768 2e-07 6_[+1]_68 chrXIII:463340-463869 3.1e-07 34_[-1]_40 chrIX:336112-336615 3.1e-07 46_[+1]_28 chrX:204524-204624 3.1e-07 70_[-1]_4 chrXII:426933-427404 3.1e-07 48_[-1]_26 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRRTCGAACCSVKGAYCTYMNGRTT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGRRTCGAACCSVKGAYCTYMNGRTT width=26 seqs=108 chrXI:162326-162705 ( 33) GGGGTCGAACCCATAATCTTCTGATT 1 chrVII:828469-828967 ( 66) GGGGTCGAACCCATAATCTTCTGATT 1 chrXIII:131569-132079 ( 62) GGGGTCGAACCCATAATCTTCTGATT 1 chrVII:736204-736541 ( 53) GGGGTCGAACCCATAATCTTCTGATT 1 chrX:355171-355271 ( 11) GGGGTCGAACCCATAATCTTCTGATT 1 chrXIII:747737-748134 ( 18) GGGGTCGAACCCATAATCTTCTGATT 1 chrVII:405312-405704 ( 47) GGGGTCGAACCCATAATCTTCTGATT 1 chrX:374223-374323 ( 32) GGGGTCGAACCCATAATCTTCTGATT 1 chrIV:568698-569208 ( 14) GGGGTCGAACCCATAATCTTCTGATT 1 chrIX:210533-210920 ( 26) GGGATCGAACCGCTGATCCCCGCGTT 1 chrXVI:880071-880561 ( 41) GGGATCGAACCGCTGATCCCCGCGTT 1 chrXIV:569670-570128 ( 29) GGGATCGAACCGCTGATCCCCGCGTT 1 chrXIV:602127-602547 ( 62) GGGATCGAACCGCTGATCCCCGCGTT 1 chrIX:183305-183680 ( 9) GGGATCGAACCGCTGATCCCCGCGTT 1 chrIV:667761-668232 ( 72) GGGATCGAACCGCTGATCCCCGCGTT 1 chrV:435571-435996 ( 30) GGGCTCGAACCCCTAACCTTATGATT 1 chrX:414812-414912 ( 30) GGGCTCGAACCCCTAACCTTATGATT 1 chrIV:1201520-1202108 ( 22) GGGCTCGAACCCCTAACCTTATGATT 1 chrXVI:581851-582311 ( 67) GGGCTCGAACCCCTAACCTTATGATT 1 chrIV:1352339-1352698 ( 9) GGGCTCGAACCCCTAACCTTATGATT 1 chrVII:185536-185955 ( 30) GGGCTCGAACCCCTAACCTTATGATT 1 chrXIII:480391-480830 ( 72) GGGCTCGAACCCCTAACCTTATGATT 1 chrIX:300051-300472 ( 28) GGGCTCGAACCCCTAACCTTATGATT 1 chrVII:122048-122523 ( 70) GGGCTCGAACCCCTAACCTTATGATT 1 chrXI:202848-203301 ( 11) GGGCTCGAACCCCTAACCTTATGATT 1 chrXV:854043-854421 ( 16) GGAATCGAACCGATGACCTCTTCCTT 1 chrI:166066-166560 ( 40) GGAATCGAACCGATGACCTCTTCCTT 1 chrXII:214702-215139 ( 24) GGAATCGAACCGATGACCTCTTCCTT 1 chrXVI:572059-572575 ( 36) GGAATCGAACCGGGGGCCCAACGATG 1 chrV:487121-487626 ( 19) GGAGTCGAACCCCGGTCTCCACGGTG 1 chrIX:370243-370625 ( 68) GGAGTCGAACCCCGGTCTCCACGGTG 1 chrVII:541634-542147 ( 45) GGAGTCGAACCCCGGTCTCCACGGTG 1 chrVII:845482-845912 ( 36) GGAATCGAACCGGGGGCCCAACGATG 1 chrXV:226465-226857 ( 11) GGAATCGAACCGGGGGCCCAACGATG 1 chrV:176915-177406 ( 24) GGAGTCGAACCCCGGTCTCCACGGTG 1 chrX:396580-396680 ( 23) GGAATCGAACCGGGGGCCCAACGATG 1 chrIX:197432-197801 ( 61) GGAGTCGAACCCCGGTCTCCACGGTG 1 chrXIII:290587-291151 ( 17) GGAGTCGAACCCCGGTCTCCACGGTG 1 chrVII:401384-401751 ( 21) GGAGTCGAACCCCGGTCTCCACGGTG 1 chrX:531620-531720 ( 20) GGAATCGAACCGGGGGCCCAACGATG 1 chrIV:83351-83791 ( 61) GGAATCGAACCGGGGGCCCAACGATG 1 chrX:115700-115800 ( 49) GGAGTCGAACCCCGGTCTCCACGGTG 1 chrII:645021-645393 ( 45) GGAGTCGAACCCCGGTCTCCACGGTG 1 chrIV:802562-802964 ( 29) GGATTCGAACCGGGGTTGTCCGGATC 1 chrIV:645020-645361 ( 24) GGATTCGAACCGGGGTTGTCCGGATC 1 chrVIII:134100-134585 ( 64) GGATTCGAACCGGGGTTGTCCGGATC 1 chrII:350619-351145 ( 30) GGATTCGAACCGGGGTTGTCCGGATC 1 chrIII:168135-168567 ( 11) GGATTCGAACCGGGGTTGTCCGGATC 1 chrV:250123-250534 ( 43) GGATTCGAACCGGGGTTGTCCGGATC 1 chrXII:448377-448926 ( 60) GGATTCGAACCGGGGTTGTCCGGATC 1 chrV:130858-131373 ( 28) GGATTCGAACCGGGGTTGTTCGGATC 1 chrXIV:104622-105100 ( 30) GGATTTGAACCGATGATCTCCACATT 1 chrIV:434039-434514 ( 49) GGATTTGAACCGATGATCTCCACATT 1 chrIII:295292-295824 ( 12) GGATTTGAACCGATGATCTCCACATT 1 chrII:266199-266643 ( 43) GGATTTGAACCGATGATCTCCACATT 1 chrXV:980507-981003 ( 46) GGAATTGAACCCAGGGCCTCTCGCAT 1 chrXIV:567924-568494 ( 22) GGAATTGAACCCAGGGCCTCTCGCAT 1 chrVIII:388672-389183 ( 27) GGAATTGAACCCAGGGCCTCTCGCAT 1 chrXV:300878-301408 ( 69) GGAATTGAACCCAGGGCCTCTCGCAT 1 chrXIV:546966-547397 ( 29) GGAATTGAACCCAGGGCCTCTCGCAT 1 chrX:538363-538463 ( 21) GGACTCGAACCCGCAGTCTTCTCCTT 1 chrXI:379489-379918 ( 64) AGGATCGAACTGGGGACGTTCTGCGT 1 chrXII:687664-688144 ( 16) AGGATCGAACTGGGGACGTTCTGCGT 1 chrXIII:372201-372696 ( 58) AGGATCGAACTGGGGACGTTCTGCGT 1 chrXI:307971-308410 ( 15) AGGATCGAACTGGGGACGTTCTGCGT 1 chrVII:412147-412555 ( 4) AGGATCGAACTGGGGACGTTCTGCGT 1 chrV:469287-469692 ( 55) AGGATCGAACTGGGGACGTTCTGCGT 1 chrXIII:807974-808525 ( 58) GGATTCGAACTGGGGTTGTTCGGATC 1 chrXI:517796-518306 ( 23) GGAATCGAACCGGAGACCTCTCCCAT 1 chrVII:774158-774626 ( 43) GGAATCGAACCGGAGACCTCTCCCAT 1 chrIV:410206-410689 ( 18) GGAATCGAACCGGAGACCTCTCCCAT 1 chrXIII:320968-321320 ( 64) GGAATCGAACCGGAGACCTCTCCCAT 1 chrIV:619736-620202 ( 61) GGACTTGAACCTGGAATCTTCTGGTT 1 chrVIII:475517-475905 ( 56) AGGATCGAACTCGGGACCTTTGCCGT 1 chrXV:340121-340543 ( 28) GGACTTGAACCTGGAATCTTCTGGTT 1 chrXVI:769010-769465 ( 31) GGGCTCGAACCCCTGACATTTCGGTA 1 chrXII:875224-875632 ( 57) GGGCTCGAACCCCTGACATTTCGGTA 1 chrXI:490780-491229 ( 50) GGACTTGAACCTGGAATCTTCTGGTT 1 chrXI:578782-579271 ( 48) GGGCTCGAACCCCTGACATTTCGGTA 1 chrX:422710-422810 ( 31) AGGTTCGAACTCTCGACCTTCAGATT 1 chrXIII:837747-838228 ( 43) CGAGTCGAACGCCCGATCTCAAGATT 1 chrXIII:572755-573111 ( 11) AGGTTCGAACTCTCGACCTTCAGATT 1 chrX:390843-390943 ( 31) AGGTTCGAACTCTCGACCTTCAGATT 1 chrX:354053-354153 ( 72) CGAGTCGAACGCCCGATCTCAAGATT 1 chrIV:946162-946605 ( 31) CGAGTCGAACGCCCGATCTCAAGATT 1 chrVI:167289-167664 ( 63) CGAGTCGAACGCCCGATCTCAAGATT 1 chrVI:210476-210869 ( 8) CGAGTCGAACGCCCGATCTCAAGATT 1 chrII:326600-327078 ( 14) AGGTTCGAACTCGGGATCTTCGCCGT 1 chrXI:74444-74948 ( 15) AGGGTTGAACTCACGATCTTGCGATT 1 chrIII:127552-127913 ( 71) AGGGTTGAACTCACGATCTTGCGATT 1 chrXII:975809-976217 ( 31) AGGGTTGAACTCACGATCTTGCGATT 1 chrVII:730978-731366 ( 52) AGGGTTGAACTCACGATCTTGCGATT 1 chrVI:137274-137773 ( 24) AGGGTTGAACTCACGATCTTGCGATT 1 chrXIV:632429-632882 ( 31) AGGGTTGAACTCACGATCTTGCGATT 1 chrVII:706900-707328 ( 55) AGGATCGAACTAAGGACCAACAGATT 1 chrII:642867-643255 ( 7) AGGATCGAACTAAGGACCAACAGATT 1 chrXVI:775607-776029 ( 8) AGGATCGAACTAAGGACCAACAGATT 1 chrXVI:435655-436165 ( 44) AGGATCGAACTAAGGACCAACAGATT 1 chrVIII:466787-467249 ( 57) AGAATTGAACTAGCGACCTTTGCATT 1 chrXIII:352108-352534 ( 63) TGGATCGAACACAGGACCTCCAGATA 1 chrXI:313168-313646 ( 55) AGAATCGAACCAGGGTTTCATCGGCC 1 chrXIII:362865-363303 ( 65) AGAATCGAACCAGGGTTTCATCGGCC 1 chrVII:110425-110899 ( 24) AGAATCGAACCAGGGTTTCATCGGCC 1 chrX:517668-517768 ( 7) GGTTTCGATCCGAGGACATCAGGGTT 1 chrXIII:463340-463869 ( 35) GGAATTGAACCCCGATCTGGCACGCG 1 chrIX:336112-336615 ( 47) GGAATTGAACCCCGATCTGGCACGCG 1 chrX:204524-204624 ( 71) GGAATTGAACCCCGATCTGGCACGCG 1 chrXII:426933-427404 ( 49) GGAATTGAACCCCGATCTGGCACGCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRRTCGAACCSVKGAYCTYMNGRTT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 26 n= 45000 bayes= 10.6494 E= 4.5e-456 -40 -208 187 -504 -1340 -1340 236 -1340 79 -1340 125 -504 42 -31 46 -87 -1340 -1340 -1340 171 -1340 201 -1340 -52 -1340 -1340 236 -1340 171 -1340 -1340 -1340 170 -1340 -1340 -504 -1340 236 -1340 -1340 -504 191 -208 -52 -204 146 89 -345 0 81 73 -345 -304 -40 133 9 -29 -1340 194 -1340 111 -1340 -81 -40 -1340 153 -1340 51 -304 179 -49 -104 -304 19 -240 121 -134 109 -240 48 -9 127 -181 -72 -65 77 -15 -4 -1340 25 198 -1340 82 -1 46 -1340 -187 -159 -140 135 -304 -81 -15 115 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRRTCGAACCSVKGAYCTYMNGRTT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 26 nsites= 108 E= 4.5e-456 0.231481 0.046296 0.712963 0.009259 0.000000 0.000000 1.000000 0.000000 0.527778 0.000000 0.462963 0.009259 0.407407 0.157407 0.268519 0.166667 0.000000 0.000000 0.000000 1.000000 0.000000 0.787037 0.000000 0.212963 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.990741 0.000000 0.000000 0.009259 0.000000 1.000000 0.000000 0.000000 0.009259 0.731481 0.046296 0.212963 0.074074 0.537037 0.361111 0.027778 0.305556 0.342593 0.324074 0.027778 0.037037 0.148148 0.490741 0.324074 0.250000 0.000000 0.750000 0.000000 0.657407 0.000000 0.111111 0.231481 0.000000 0.564815 0.000000 0.435185 0.037037 0.675926 0.138889 0.148148 0.037037 0.222222 0.037037 0.703704 0.120370 0.416667 0.037037 0.425926 0.287037 0.472222 0.055556 0.185185 0.194444 0.333333 0.175926 0.296296 0.000000 0.231481 0.768519 0.000000 0.537037 0.194444 0.268519 0.000000 0.083333 0.064815 0.074074 0.777778 0.037037 0.111111 0.175926 0.675926 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRRTCGAACCSVKGAYCTYMNGRTT MEME-1 regular expression -------------------------------------------------------------------------------- [GA]G[AG][AG]T[CT]GAAC[CT][CG][CGA][GT][GA][AT][CT]C[TC][TC][CA][CT][GC][AG]TT -------------------------------------------------------------------------------- Time 351.17 secs. ******************************************************************************** ******************************************************************************** MOTIF SSCTYWAMCMACTRRRCYA MEME-2 width = 19 sites = 106 llr = 1494 E-value = 1.0e-236 ******************************************************************************** -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRRRCYA MEME-2 Description -------------------------------------------------------------------------------- Simplified A 12111465:3a::434::a pos.-specific C 53714::5a5:8:22:a7: probability G 45:2::2::2:::356::: matrix T ::26562::::2a1:::3: bits 2.4 * * 2.1 * * 1.9 * * 1.6 * *** * * Relative 1.4 * *** * * Entropy 1.2 * *** **** (20.3 bits) 0.9 * * ** *** **** 0.7 *** * ** *** ***** 0.5 *** ** ****** ***** 0.2 ******************* 0.0 ------------------- Multilevel CGCTTTACCCACTAGGCCA consensus GCTGCA A A GAA T sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRRRCYA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------- chrXV:854043-854421 + 52 1.06e-09 GCAAGGGAAG CGCGCTACCAACTGCGCCA TGTGCCCTGA chrVII:794206-794593 - 75 1.06e-09 AGGGAAG CGCGCTACCAACTGCGCCA TGTGCCCGCA chrI:166066-166560 - 11 1.06e-09 GCAAGGGAAG CGCGCTACCAACTGCGCCA TGTGCCCAAC chrXII:214702-215139 + 60 1.06e-09 GCAAGGGAAG CGCGCTACCAACTGCGCCA TGTGCCCTAA chrXVI:880071-880561 + 78 1.33e-09 TTAGCACGGT GCCTTAACCAACTGGGCCA AGAG chrXIV:569670-570128 + 66 1.33e-09 TTAGCACGGT GCCTTAACCAACTGGGCCA AGAGACCACT chrXIV:602127-602547 - 32 1.33e-09 TTAGCACGGT GCCTTAACCAACTGGGCCA AGAGACCATT chrIX:183305-183680 + 46 1.33e-09 TTAGCACGGT GCCTTAACCAACTGGGCCA AGAGACCAGG chrVII:774158-774626 - 14 1.33e-09 GCTAAGGGAG CGCGCTACCGACTACGCCA CACGCCCAAT chrVI:204826-205169 + 24 1.33e-09 GCTAAGGGAG CGCGCTACCGACTACGCCA CACGCCCGAA chrXII:1051910-1052366 + 31 1.33e-09 TTAGCACGGT GCCTTAACCAACTGGGCCA AGAGACCATG chrX:197183-197283 + 25 1.33e-09 GCTAAGGGAG CGCGCTACCGACTACGCCA CACGCCCTAA chrIII:227787-228206 - 3 1.67e-09 TCGAGTCTCT CGCCTTAACCACTCGGCCA TA chrV:288237-288718 + 72 1.67e-09 TCAAGTCTGT CGCCTTAACCACTCGGCCA TAGTGCCTAT chrI:182352-182757 + 74 1.67e-09 TCTAATCTTT CGCCTTAACCACTCGGCCA AGTTGCCA chrVIII:132814-133353 + 49 1.67e-09 TCTAATCTTT CGCCTTAACCACTCGGCCA AGTTGCCACT chrXII:167756-168228 + 58 1.67e-09 TCTAATCTTT CGCCTTAACCACTCGGCCA AGTTGCCATA chrXII:731929-732259 - 53 1.67e-09 TAAATCTGAC GCCTTAAACCACTCGGCCA AACTCCCATT chrIV:437568-437981 - 55 1.67e-09 TCTAATCTTT CGCCTTAACCACTCGGCCA AGTTGCCTTA chrVII:561457-561923 + 78 1.67e-09 TCTAATCTTT CGCCTTAACCACTCGGCCA AGTT chrX:617765-617865 - 29 1.67e-09 TAAATCTGAC GCCTTAAACCACTCGGCCA AACTCCCATT chrVII:115298-115750 - 21 5.57e-09 AAAAGCCGAA CGCTCTACCAACTGAGCTA ACAAGGATGA chrXII:875224-875632 - 5 5.57e-09 AAAAGCCGAA CGCTCTACCAACTGAGCTA ACAA chrII:9392-9851 - 19 6.67e-09 TAAGTCTGCC GCCTTAGACCACTCGGCCA ACCCTCCACG chrIV:519584-519908 - 54 6.67e-09 TAAGTCTGCC GCCTTAGACCACTCGGCCA ACCCTCCGTA chrXI:83987-84431 - 56 6.67e-09 TAAGTCTGCC GCCTTAGACCACTCGGCCA ACCCTCCATA chrX:424283-424383 + 46 6.67e-09 TAAGTCTGCC GCCTTAGACCACTCGGCCA ACCCTCCATC chrXII:962811-963336 + 7 6.67e-09 TCTGCC GCCTTAGACCACTCGGCCA ACCCTCCGTC chrIII:127552-127913 - 41 9.49e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCA TGGAGTCATT chrXII:975809-976217 + 68 9.49e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCA TGGAGTCTTT chrXVI:810488-810866 - 56 9.49e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCA TGGAGTCGCA chrXV:228131-228547 - 49 9.49e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCA TGGAGTCTAA chrXIV:104622-105100 - 1 9.49e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCA chrVII:730978-731366 - 22 9.49e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCA TGGAGTCTTT chrVI:137274-137773 + 61 9.49e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCA TGGAGTCAGT chrIX:174847-175237 - 46 9.49e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCA TAGAAGCTCG chrXIV:560543-561001 + 18 9.49e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCA TAGAAGCCCG chrII:266199-266643 - 14 9.49e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCA TAGAAGCAGT chrXIV:632429-632882 - 1 9.49e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCA chrV:435571-435996 + 66 3.34e-08 AAGAGTCATA CGCGCTACCGATTGCGCCA ACAAGGCTCT chrX:414812-414912 - 1 3.34e-08 AAGAGTCATA CGCGCTACCGATTGCGCCA chrXVI:581851-582311 - 38 3.34e-08 AAGAGTCATA CGCGCTACCGATTGCGCCA ACAAGGCTCT chrIV:1352339-1352698 + 45 3.34e-08 AAGAGTCATA CGCGCTACCGATTGCGCCA ACAAGGCTAT chrVII:185536-185955 + 66 3.34e-08 AAGAGTCATA CGCGCTACCGATTGCGCCA ACAAGGCTAT chrIX:300051-300472 + 64 3.34e-08 AAGAGTCATA CGCGCTACCGATTGCGCCA ACAAGGCTAT chrVII:122048-122523 - 41 3.34e-08 AAGAGTCATA CGCGCTACCGATTGCGCCA ACAAGGCTAA chrXI:379489-379918 - 34 8.53e-08 TTAAGCAGAT GCCATAACCGACTAGACCA CGAAACCTAT chrVII:73682-74158 + 7 8.53e-08 GCAGAT GCCATAACCGACTAGACCA CGAAACCACT chrXII:605146-605617 + 76 8.53e-08 ATAAGCACGA AGCTCTAACCACTGAGCTA CACGAG chrVII:823292-823690 - 48 8.53e-08 TTAAGCAGAT GCCATAACCGACTAGACCA CGAAACCACT chrXII:687664-688144 + 53 8.53e-08 TTAAGCAGAT GCCATAACCGACTAGACCA CGAAACCTAT chrXI:307971-308410 + 52 8.53e-08 TTAAGCAGAT GCCATAACCGACTAGACCA CGAAACCACT chrVII:412147-412555 + 41 8.53e-08 TTAAGCAGAT GCCATAACCGACTAGACCA CGAAACCAGT chrV:469287-469692 - 25 8.53e-08 TTAAGCAGAT GCCATAACCGACTAGACCA CGAAACCAAT chrX:378171-378271 - 46 8.53e-08 TTAAGCAGAT GCCATAACCGACTAGACCA CGAAACCTAT chrXIII:352108-352534 - 16 1.23e-07 TTCAGTCTGG CGCTCTCCCAACTGAGCTA AATCCGCTTA chrXVI:622360-622855 + 49 1.23e-07 TTCAGTCTGG CGCTCTCCCAACTGAGCTA AATCCGCATA chrVIII:237703-238130 + 48 1.23e-07 TTCAGTCTGG CGCTCTCCCAACTGAGCTA AATCCGCTTA chrXVI:560095-560471 + 31 1.23e-07 TTCAGTCTGG CGCTCTCCCAACTGAGCTA AATCCGCTCA chrXVI:572059-572575 - 9 2.38e-07 TGGCAACGTT GGATTTTACCACTAAACCA CTTGCGCG chrVII:845482-845912 - 9 2.38e-07 TGGCAACGTT GGATTTTACCACTAAACCA CTTGCGCT chrXV:226465-226857 + 45 2.38e-07 TGGCAACGTT GGATTTTACCACTAAACCA CTTGCGCTGA chrXIII:183795-184163 + 14 2.38e-07 TGGCAACGTT GGATTTTACCACTAAACCA CTTGCGCGAT chrX:396580-396680 + 57 2.38e-07 TGGCAACGTT GGATTTTACCACTAAACCA CTTGCGCTTA chrIV:83351-83791 - 34 2.38e-07 TGGCAACGTT GGATTTTACCACTAAACCA CTTGCGCTAA chrVI:162051-162427 - 46 2.38e-07 TGGCAACGTT GGATTTTACCACTAAACCA CTTGCGCTTG chrIV:992636-993030 - 56 2.38e-07 TGGCAACGTT GGATTTTACCACTAAACCA CTTGCGCTCA chrIV:1461518-1462038 + 76 3.23e-07 TGAATCAGGC GCCTTAGACCGCTCGGCCA AACAAC chrX:422710-422810 - 2 3.23e-07 ATGAGACTGA CGCTCTTCCTACTGAGCTA C chrI:180944-181443 - 5 3.23e-07 TGAATCAGGC GCCTTAGACCGCTCGGCCA AACA chrXIII:572755-573111 + 47 3.23e-07 ATGAGACTGA CGCTCTTCCTACTGAGCTA CTGAAGCTGT chrX:390843-390943 + 67 3.23e-07 ATGAGACTGA CGCTCTTCCTACTGAGCTA CTGAAGCACT chrIV:1175619-1176054 - 50 3.23e-07 ATGAGACTGA CGCTCTTCCTACTGAGCTA CTGAAGCTTT chrI:138972-139337 - 55 5.64e-07 CCCAAAGCGA GAATCATACCACTAGACCA CACGCCCGTA chrXV:300878-301408 - 11 5.64e-07 CCCAAAGCGA GAATCATACCACTAGACCA CACGCCCGAT chrVI:101177-101593 - 48 5.64e-07 CCCAAAGCGA GAATCATACCACTAGACCA CACGCCCGAA chrXV:464258-464720 - 18 5.64e-07 CCCAAAGCGA GAATCATACCACTAGACCA CACGCCCTTG chrXIII:195928-196377 + 43 5.64e-07 CCCAAAGCGA GAATCATACCACTAGACCA CACGCCCTTG chrX:354053-354153 - 27 7.29e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTA CCGAGAGTGA chrVI:167289-167664 - 18 7.29e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTA CCGAGAGTCG chrVI:210476-210869 + 60 7.29e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTA CCGAGAGTCG chrXV:340121-340543 + 64 7.92e-07 CGTAGCCAGA CGCCGTGACCATTGGGCCA CGAGGAACAG chrXI:490780-491229 - 21 7.92e-07 CGTAGCCAGA CGCCGTGACCATTGGGCCA CGAGGAACAA chrX:745109-745209 - 70 1.35e-06 CCTCCAATTA CCCATATCCAACTCCACTA CCATTACCCT chrXII:11041-11987 + 69 1.35e-06 CCTCCAATTA CCCATATCCAACTCCACTA CCGCTTACCC chrXIV:96039-96607 + 14 1.78e-06 GGAAGGGTGG GATGATAACCACTACACTA ACCGCCCATG chrXV:110828-111216 + 36 1.78e-06 GGAAGGGTGG GATGATAACCACTACACTA ACCGCCCGGG chrIV:802562-802964 + 64 2.45e-06 CAAAACCGAA AGTGATAACCACTACACTA TAGGACCGAC chrIV:645020-645361 + 59 2.45e-06 CAAAACCGAA AGTGATAACCACTACACTA TAGGACCGTA chrVIII:134100-134585 - 36 2.45e-06 CAAAACCGAA AGTGATAACCACTACACTA TAGGACCGGA chrII:350619-351145 - 2 2.45e-06 CAAAACCGAA AGTGATAACCACTACACTA T chrIII:168135-168567 + 46 2.45e-06 CAAAACCGAA AGTGATAACCACTACACTA TAGGACCAGG chrV:130858-131373 + 63 2.45e-06 CAAAACCGAA AGTGATAACCACTACACTA TAAAACCTCT chrV:250123-250534 - 15 2.45e-06 CAAAACCGAA AGTGATAACCACTACACTA TAGGACCAGT chrXIII:463340-463869 - 7 2.76e-06 GACAAGCGCC CATTCTGACCATTAAACTA TCACGG chrX:355171-355271 - 65 2.76e-06 GACAAGCGCC CATTCTGACCATTAAACTA TCACGGAAGA chrIX:336112-336615 + 82 2.76e-06 GACAAGCGCC CATTCTGACCATTAAACTA chrVII:544404-544910 + 16 2.76e-06 GACAAGCGCC CATTCTGACCATTAAACTA TCACGGAAGA chrXV:571753-572152 - 63 2.76e-06 GACAAGCGCC CATTCTGACCATTAAACTA TCACGGATTT chrX:204524-204624 - 43 2.76e-06 GACAAGCGCC CATTCTGACCATTAAACTA TCACGGATTT chrXII:426933-427404 - 21 2.76e-06 GACAAGCGCC CATTCTGACCATTAAACTA TCACGGATAA chrXI:513198-513608 + 25 2.76e-06 GACAAGCGCC CATTCTGACCATTAAACTA TCACGGAACG chrIV:568698-569208 - 68 2.76e-06 GACAAGCGCC CATTCTGACCATTAAACTA TCACGGAAGA chrII:405679-406266 - 45 2.76e-06 GACAAGCGCC CATTCTGACCATTAAACTA TCACGGAAGA chrII:326600-327078 + 51 3.84e-06 TAAAGGCGAC GTCTTGAACCACTGGACCA TTGGACCCGG chrXII:489311-489580 - 3 7.00e-06 ACTCGGTCAG GCTCTTACCAGCTTAACTA CA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRRRCYA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXV:854043-854421 1.1e-09 51_[+2]_30 chrVII:794206-794593 1.1e-09 74_[-2]_7 chrI:166066-166560 1.1e-09 10_[-2]_71 chrXII:214702-215139 1.1e-09 59_[+2]_22 chrXVI:880071-880561 1.3e-09 77_[+2]_4 chrXIV:569670-570128 1.3e-09 65_[+2]_16 chrXIV:602127-602547 1.3e-09 31_[-2]_50 chrIX:183305-183680 1.3e-09 45_[+2]_36 chrVII:774158-774626 1.3e-09 13_[-2]_68 chrVI:204826-205169 1.3e-09 23_[+2]_58 chrXII:1051910-1052366 1.3e-09 30_[+2]_51 chrX:197183-197283 1.3e-09 24_[+2]_57 chrIII:227787-228206 1.7e-09 2_[-2]_79 chrV:288237-288718 1.7e-09 71_[+2]_10 chrI:182352-182757 1.7e-09 73_[+2]_8 chrVIII:132814-133353 1.7e-09 48_[+2]_33 chrXII:167756-168228 1.7e-09 57_[+2]_24 chrXII:731929-732259 1.7e-09 52_[-2]_29 chrIV:437568-437981 1.7e-09 54_[-2]_27 chrVII:561457-561923 1.7e-09 77_[+2]_4 chrX:617765-617865 1.7e-09 28_[-2]_53 chrVII:115298-115750 5.6e-09 20_[-2]_61 chrXII:875224-875632 5.6e-09 4_[-2]_77 chrII:9392-9851 6.7e-09 18_[-2]_63 chrIV:519584-519908 6.7e-09 53_[-2]_28 chrXI:83987-84431 6.7e-09 55_[-2]_26 chrX:424283-424383 6.7e-09 45_[+2]_36 chrXII:962811-963336 6.7e-09 6_[+2]_75 chrIII:127552-127913 9.5e-09 40_[-2]_41 chrXII:975809-976217 9.5e-09 67_[+2]_14 chrXVI:810488-810866 9.5e-09 55_[-2]_26 chrXV:228131-228547 9.5e-09 48_[-2]_33 chrXIV:104622-105100 9.5e-09 [-2]_81 chrVII:730978-731366 9.5e-09 21_[-2]_60 chrVI:137274-137773 9.5e-09 60_[+2]_21 chrIX:174847-175237 9.5e-09 45_[-2]_36 chrXIV:560543-561001 9.5e-09 17_[+2]_64 chrII:266199-266643 9.5e-09 13_[-2]_68 chrXIV:632429-632882 9.5e-09 [-2]_81 chrV:435571-435996 3.3e-08 65_[+2]_16 chrX:414812-414912 3.3e-08 [-2]_81 chrXVI:581851-582311 3.3e-08 37_[-2]_44 chrIV:1352339-1352698 3.3e-08 44_[+2]_37 chrVII:185536-185955 3.3e-08 65_[+2]_16 chrIX:300051-300472 3.3e-08 63_[+2]_18 chrVII:122048-122523 3.3e-08 40_[-2]_41 chrXI:379489-379918 8.5e-08 33_[-2]_48 chrVII:73682-74158 8.5e-08 6_[+2]_75 chrXII:605146-605617 8.5e-08 75_[+2]_6 chrVII:823292-823690 8.5e-08 47_[-2]_34 chrXII:687664-688144 8.5e-08 52_[+2]_29 chrXI:307971-308410 8.5e-08 51_[+2]_30 chrVII:412147-412555 8.5e-08 40_[+2]_41 chrV:469287-469692 8.5e-08 24_[-2]_57 chrX:378171-378271 8.5e-08 45_[-2]_36 chrXIII:352108-352534 1.2e-07 15_[-2]_66 chrXVI:622360-622855 1.2e-07 48_[+2]_33 chrVIII:237703-238130 1.2e-07 47_[+2]_34 chrXVI:560095-560471 1.2e-07 30_[+2]_51 chrXVI:572059-572575 2.4e-07 8_[-2]_73 chrVII:845482-845912 2.4e-07 8_[-2]_73 chrXV:226465-226857 2.4e-07 44_[+2]_37 chrXIII:183795-184163 2.4e-07 13_[+2]_68 chrX:396580-396680 2.4e-07 56_[+2]_25 chrIV:83351-83791 2.4e-07 33_[-2]_48 chrVI:162051-162427 2.4e-07 45_[-2]_36 chrIV:992636-993030 2.4e-07 55_[-2]_26 chrIV:1461518-1462038 3.2e-07 75_[+2]_6 chrX:422710-422810 3.2e-07 1_[-2]_80 chrI:180944-181443 3.2e-07 4_[-2]_77 chrXIII:572755-573111 3.2e-07 46_[+2]_35 chrX:390843-390943 3.2e-07 66_[+2]_15 chrIV:1175619-1176054 3.2e-07 49_[-2]_32 chrI:138972-139337 5.6e-07 54_[-2]_27 chrXV:300878-301408 5.6e-07 10_[-2]_71 chrVI:101177-101593 5.6e-07 47_[-2]_34 chrXV:464258-464720 5.6e-07 17_[-2]_64 chrXIII:195928-196377 5.6e-07 42_[+2]_39 chrX:354053-354153 7.3e-07 26_[-2]_55 chrVI:167289-167664 7.3e-07 17_[-2]_64 chrVI:210476-210869 7.3e-07 59_[+2]_22 chrXV:340121-340543 7.9e-07 63_[+2]_18 chrXI:490780-491229 7.9e-07 20_[-2]_61 chrX:745109-745209 1.4e-06 69_[-2]_12 chrXII:11041-11987 1.4e-06 68_[+2]_13 chrXIV:96039-96607 1.8e-06 13_[+2]_68 chrXV:110828-111216 1.8e-06 35_[+2]_46 chrIV:802562-802964 2.4e-06 63_[+2]_18 chrIV:645020-645361 2.4e-06 58_[+2]_23 chrVIII:134100-134585 2.4e-06 35_[-2]_46 chrII:350619-351145 2.4e-06 1_[-2]_80 chrIII:168135-168567 2.4e-06 45_[+2]_36 chrV:130858-131373 2.4e-06 62_[+2]_19 chrV:250123-250534 2.4e-06 14_[-2]_67 chrXIII:463340-463869 2.8e-06 6_[-2]_75 chrX:355171-355271 2.8e-06 64_[-2]_17 chrIX:336112-336615 2.8e-06 81_[+2] chrVII:544404-544910 2.8e-06 15_[+2]_66 chrXV:571753-572152 2.8e-06 62_[-2]_19 chrX:204524-204624 2.8e-06 42_[-2]_39 chrXII:426933-427404 2.8e-06 20_[-2]_61 chrXI:513198-513608 2.8e-06 24_[+2]_57 chrIV:568698-569208 2.8e-06 67_[-2]_14 chrII:405679-406266 2.8e-06 44_[-2]_37 chrII:326600-327078 3.8e-06 50_[+2]_31 chrXII:489311-489580 7e-06 2_[-2]_79 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRRRCYA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SSCTYWAMCMACTRRRCYA width=19 seqs=106 chrXV:854043-854421 ( 52) CGCGCTACCAACTGCGCCA 1 chrVII:794206-794593 ( 75) CGCGCTACCAACTGCGCCA 1 chrI:166066-166560 ( 11) CGCGCTACCAACTGCGCCA 1 chrXII:214702-215139 ( 60) CGCGCTACCAACTGCGCCA 1 chrXVI:880071-880561 ( 78) GCCTTAACCAACTGGGCCA 1 chrXIV:569670-570128 ( 66) GCCTTAACCAACTGGGCCA 1 chrXIV:602127-602547 ( 32) GCCTTAACCAACTGGGCCA 1 chrIX:183305-183680 ( 46) GCCTTAACCAACTGGGCCA 1 chrVII:774158-774626 ( 14) CGCGCTACCGACTACGCCA 1 chrVI:204826-205169 ( 24) CGCGCTACCGACTACGCCA 1 chrXII:1051910-1052366 ( 31) GCCTTAACCAACTGGGCCA 1 chrX:197183-197283 ( 25) CGCGCTACCGACTACGCCA 1 chrIII:227787-228206 ( 3) CGCCTTAACCACTCGGCCA 1 chrV:288237-288718 ( 72) CGCCTTAACCACTCGGCCA 1 chrI:182352-182757 ( 74) CGCCTTAACCACTCGGCCA 1 chrVIII:132814-133353 ( 49) CGCCTTAACCACTCGGCCA 1 chrXII:167756-168228 ( 58) CGCCTTAACCACTCGGCCA 1 chrXII:731929-732259 ( 53) GCCTTAAACCACTCGGCCA 1 chrIV:437568-437981 ( 55) CGCCTTAACCACTCGGCCA 1 chrVII:561457-561923 ( 78) CGCCTTAACCACTCGGCCA 1 chrX:617765-617865 ( 29) GCCTTAAACCACTCGGCCA 1 chrVII:115298-115750 ( 21) CGCTCTACCAACTGAGCTA 1 chrXII:875224-875632 ( 5) CGCTCTACCAACTGAGCTA 1 chrII:9392-9851 ( 19) GCCTTAGACCACTCGGCCA 1 chrIV:519584-519908 ( 54) GCCTTAGACCACTCGGCCA 1 chrXI:83987-84431 ( 56) GCCTTAGACCACTCGGCCA 1 chrX:424283-424383 ( 46) GCCTTAGACCACTCGGCCA 1 chrXII:962811-963336 ( 7) GCCTTAGACCACTCGGCCA 1 chrIII:127552-127913 ( 41) GCCTTAACCAACTTGGCCA 1 chrXII:975809-976217 ( 68) GCCTTAACCAACTTGGCCA 1 chrXVI:810488-810866 ( 56) GCCTTAACCAACTTGGCCA 1 chrXV:228131-228547 ( 49) GCCTTAACCAACTTGGCCA 1 chrXIV:104622-105100 ( 1) CGCCTTACCAACTTGGCCA 1 chrVII:730978-731366 ( 22) GCCTTAACCAACTTGGCCA 1 chrVI:137274-137773 ( 61) GCCTTAACCAACTTGGCCA 1 chrIX:174847-175237 ( 46) CGCCTTACCAACTTGGCCA 1 chrXIV:560543-561001 ( 18) CGCCTTACCAACTTGGCCA 1 chrII:266199-266643 ( 14) CGCCTTACCAACTTGGCCA 1 chrXIV:632429-632882 ( 1) GCCTTAACCAACTTGGCCA 1 chrV:435571-435996 ( 66) CGCGCTACCGATTGCGCCA 1 chrX:414812-414912 ( 1) CGCGCTACCGATTGCGCCA 1 chrXVI:581851-582311 ( 38) CGCGCTACCGATTGCGCCA 1 chrIV:1352339-1352698 ( 45) CGCGCTACCGATTGCGCCA 1 chrVII:185536-185955 ( 66) CGCGCTACCGATTGCGCCA 1 chrIX:300051-300472 ( 64) CGCGCTACCGATTGCGCCA 1 chrVII:122048-122523 ( 41) CGCGCTACCGATTGCGCCA 1 chrXI:379489-379918 ( 34) GCCATAACCGACTAGACCA 1 chrVII:73682-74158 ( 7) GCCATAACCGACTAGACCA 1 chrXII:605146-605617 ( 76) AGCTCTAACCACTGAGCTA 1 chrVII:823292-823690 ( 48) GCCATAACCGACTAGACCA 1 chrXII:687664-688144 ( 53) GCCATAACCGACTAGACCA 1 chrXI:307971-308410 ( 52) GCCATAACCGACTAGACCA 1 chrVII:412147-412555 ( 41) GCCATAACCGACTAGACCA 1 chrV:469287-469692 ( 25) GCCATAACCGACTAGACCA 1 chrX:378171-378271 ( 46) GCCATAACCGACTAGACCA 1 chrXIII:352108-352534 ( 16) CGCTCTCCCAACTGAGCTA 1 chrXVI:622360-622855 ( 49) CGCTCTCCCAACTGAGCTA 1 chrVIII:237703-238130 ( 48) CGCTCTCCCAACTGAGCTA 1 chrXVI:560095-560471 ( 31) CGCTCTCCCAACTGAGCTA 1 chrXVI:572059-572575 ( 9) GGATTTTACCACTAAACCA 1 chrVII:845482-845912 ( 9) GGATTTTACCACTAAACCA 1 chrXV:226465-226857 ( 45) GGATTTTACCACTAAACCA 1 chrXIII:183795-184163 ( 14) GGATTTTACCACTAAACCA 1 chrX:396580-396680 ( 57) GGATTTTACCACTAAACCA 1 chrIV:83351-83791 ( 34) GGATTTTACCACTAAACCA 1 chrVI:162051-162427 ( 46) GGATTTTACCACTAAACCA 1 chrIV:992636-993030 ( 56) GGATTTTACCACTAAACCA 1 chrIV:1461518-1462038 ( 76) GCCTTAGACCGCTCGGCCA 1 chrX:422710-422810 ( 2) CGCTCTTCCTACTGAGCTA 1 chrI:180944-181443 ( 5) GCCTTAGACCGCTCGGCCA 1 chrXIII:572755-573111 ( 47) CGCTCTTCCTACTGAGCTA 1 chrX:390843-390943 ( 67) CGCTCTTCCTACTGAGCTA 1 chrIV:1175619-1176054 ( 50) CGCTCTTCCTACTGAGCTA 1 chrI:138972-139337 ( 55) GAATCATACCACTAGACCA 1 chrXV:300878-301408 ( 11) GAATCATACCACTAGACCA 1 chrVI:101177-101593 ( 48) GAATCATACCACTAGACCA 1 chrXV:464258-464720 ( 18) GAATCATACCACTAGACCA 1 chrXIII:195928-196377 ( 43) GAATCATACCACTAGACCA 1 chrX:354053-354153 ( 27) CCTTAAACCAACTTGGCTA 1 chrVI:167289-167664 ( 18) CCTTAAACCAACTTGGCTA 1 chrVI:210476-210869 ( 60) CCTTAAACCAACTTGGCTA 1 chrXV:340121-340543 ( 64) CGCCGTGACCATTGGGCCA 1 chrXI:490780-491229 ( 21) CGCCGTGACCATTGGGCCA 1 chrX:745109-745209 ( 70) CCCATATCCAACTCCACTA 1 chrXII:11041-11987 ( 69) CCCATATCCAACTCCACTA 1 chrXIV:96039-96607 ( 14) GATGATAACCACTACACTA 1 chrXV:110828-111216 ( 36) GATGATAACCACTACACTA 1 chrIV:802562-802964 ( 64) AGTGATAACCACTACACTA 1 chrIV:645020-645361 ( 59) AGTGATAACCACTACACTA 1 chrVIII:134100-134585 ( 36) AGTGATAACCACTACACTA 1 chrII:350619-351145 ( 2) AGTGATAACCACTACACTA 1 chrIII:168135-168567 ( 46) AGTGATAACCACTACACTA 1 chrV:130858-131373 ( 63) AGTGATAACCACTACACTA 1 chrV:250123-250534 ( 15) AGTGATAACCACTACACTA 1 chrXIII:463340-463869 ( 7) CATTCTGACCATTAAACTA 1 chrX:355171-355271 ( 65) CATTCTGACCATTAAACTA 1 chrIX:336112-336615 ( 82) CATTCTGACCATTAAACTA 1 chrVII:544404-544910 ( 16) CATTCTGACCATTAAACTA 1 chrXV:571753-572152 ( 63) CATTCTGACCATTAAACTA 1 chrX:204524-204624 ( 43) CATTCTGACCATTAAACTA 1 chrXII:426933-427404 ( 21) CATTCTGACCATTAAACTA 1 chrXI:513198-513608 ( 25) CATTCTGACCATTAAACTA 1 chrIV:568698-569208 ( 68) CATTCTGACCATTAAACTA 1 chrII:405679-406266 ( 45) CATTCTGACCATTAAACTA 1 chrII:326600-327078 ( 51) GTCTTGAACCACTGGACCA 1 chrXII:489311-489580 ( 3) GCTCTTACCAGCTTAACTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRRRCYA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 19 n= 49200 bayes= 9.40633 E= 1.0e-236 -201 133 115 -1337 -93 76 136 -501 -131 176 -1337 -49 -169 -56 15 87 -143 95 -337 69 27 -1337 -437 103 99 -237 -12 -77 69 138 -1337 -1337 -1337 236 -1337 -1337 -1 133 -20 -301 167 -1337 -279 -1337 -1337 207 -1337 -77 -1337 -1337 -1337 171 41 -20 54 -111 -11 27 130 -1337 45 -1337 158 -1337 -1337 236 -1337 -1337 -1337 176 -1337 16 171 -1337 -1337 -1337 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRRRCYA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 19 nsites= 106 E= 1.0e-236 0.075472 0.490566 0.433962 0.000000 0.160377 0.330189 0.500000 0.009434 0.122642 0.660377 0.000000 0.216981 0.094340 0.132075 0.216981 0.556604 0.113208 0.377358 0.018868 0.490566 0.367925 0.000000 0.009434 0.622642 0.603774 0.037736 0.179245 0.179245 0.490566 0.509434 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.301887 0.490566 0.169811 0.037736 0.971698 0.000000 0.028302 0.000000 0.000000 0.820755 0.000000 0.179245 0.000000 0.000000 0.000000 1.000000 0.405660 0.169811 0.283019 0.141509 0.283019 0.235849 0.481132 0.000000 0.415094 0.000000 0.584906 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.660377 0.000000 0.339623 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRRRCYA MEME-2 regular expression -------------------------------------------------------------------------------- [CG][GC][CT][TG][TC][TA]A[CA]C[CA]ACT[AG][GAC][GA]C[CT]A -------------------------------------------------------------------------------- Time 667.11 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTCTTTTTTTTTTT MEME-3 width = 15 sites = 95 llr = 1010 E-value = 7.9e-069 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTCTTTTTTTTTTT MEME-3 Description -------------------------------------------------------------------------------- Simplified A 12:12:11:::1::: pos.-specific C 12:7::1131::12: probability G 1:3:1:::::::::1 matrix T 76737a9879a9989 bits 2.4 2.1 1.9 1.6 * * Relative 1.4 * * Entropy 1.2 * ** * * (15.3 bits) 0.9 ** ********** 0.7 ** ********** 0.5 *************** 0.2 *************** 0.0 --------------- Multilevel TTTCTTTTTTTTTTT consensus CGTA C C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCTTTTTTTTTTT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chrXI:517796-518306 + 68 1.18e-08 CATTTTAAAA TTTCTTTTTTTTTTT TTCTCTTTCC chrXII:48716-49112 - 5 1.18e-08 CTTTTCTTTT TTTCTTTTTTTTTTT TTTT chrXII:514839-515147 + 19 1.18e-08 ACACGAATAC TTTCTTTTTTTTTTT TCACAGGAAA chrX:531620-531720 + 58 3.43e-08 GCTTGCGCAG TTTCTTTTCTTTTTT TCTGGAAAAT chrVII:1000064-1000689 - 67 4.18e-08 AAGCGGTATT TTTCTTTTTTTTTCT TCCTTCTTTT chrXVI:452847-454137 - 20 4.18e-08 AAGCCATCTT TTTCTTTTTTTTTCT TTCTTCTTAC chrXII:5-261 - 52 6.80e-08 AGGGTTTCAT TTTCATTTTTTTTTT AATTTCGGTC chrXV:1091144-1091290 + 30 6.80e-08 AGGGTTTCAT TTTCATTTTTTTTTT TTAATTTCGG chrXII:704182-704653 + 80 6.80e-08 ACACTTTTTT TTTCATTTTTTTTTT TCTTTT chrXVI:819345-820014 + 36 1.01e-07 CTATTTTCTA TTTTTTTTTTTTTTT ACATCTCAAA chrX:58764-58864 - 26 1.01e-07 TTAATTTTTT TTTTTTTTTTTTTTT CACGCTCTTG chrIII:162094-164163 - 84 1.01e-07 CA TCTCTTTTTTTTTCT CAACTTCAAA chrXIV:444452-444794 + 79 1.01e-07 GAAAATTGAC TTTTTTTTTTTTTTT GTTATTT chrV:51789-53045 - 71 1.13e-07 TTTTCATTTT TATCTTTTTTTTTTT TTGCTTTTCA chrXVI:678739-679481 + 9 1.31e-07 TAAAGTAT TTTCTTTCTTTTTTT TCCTGCTACT chrVII:205322-206899 - 37 1.46e-07 TTTTCTCCGC TCTCATTTTTTTTTT GTTTCCCCTC chrX:607519-607619 + 82 2.43e-07 ATGAATTGAT TTTTTTTTCTTTTTT TCTT chrXII:366036-366577 + 82 2.43e-07 AAGAGATTTA TTTCGTTTTTTTTTT ATCA chrXV:79765-80122 + 78 2.55e-07 TTACATGGAG TTGCTTTCTTTTTTT GTCTCAGC chrVIII:103874-104275 + 79 3.85e-07 TAAAACTTTC TTGCTTTTTTTTCTT GAGACTC chrXII:722886-723427 - 64 6.65e-07 CTAATTTACG TATTTTTTTTTTTTT TGTTTTTCGT chrXVI:880071-880561 - 8 7.53e-07 CCATTTCTTT TCTCTTTCTTTTTCT CGAAAGA chrXV:1003925-1004983 + 77 7.53e-07 CAATATTTTA CTTCATTTTTTTTTT CTGTTCTCG chrVI:221763-222047 - 20 9.01e-07 CGGCTCCAAC TTTCTTTTTTTTTCG AAAATGATGA chrVII:876209-876761 + 31 9.01e-07 CCTACAGGGC TTTCTTTTTTTCTTT AAAACACGAT chrXI:260493-260939 - 12 1.15e-06 TTTTTTTAGC TCTCTTTTTTTGTTT TCGCGGGAGG chrXV:903659-904727 - 1 1.28e-06 AAAAGCGGGA TTGTTTTCTTTTTTT chrXII:808816-809644 - 76 1.28e-06 TGACATGGTC TTTCTTTTCTTTTTC GTTAATATTT chrIV:1344942-1345801 - 1 1.28e-06 TTTTCAATTT TTTCTTTTTATTTTT chrIV:591661-592878 + 26 1.45e-06 TCGGGCAAAT TTTTTTTCCTTTTTT CTCCTAACAG chrIV:1156202-1156762 - 27 1.65e-06 CGGGGTAGGA AATCTTTTTTTTTTT TAGGAGGAAC chrXII:489311-489580 + 70 1.65e-06 CAGGTGCTGC AATCTTTTTTTTTTT TCCGCGCGCA chrI:185654-186092 - 22 1.80e-06 TTTGAGATCC TTTTTTTCTTTTTCT ATTGTTTGGA chrXII:793731-797391 - 11 1.80e-06 AGTTGTTTGT CTTCTTCTTTTTTTT GTTTAATCAT chrVII:700452-701222 + 17 2.10e-06 GCTGTTAGGA TAGCATTTTTTTTCT ATGTACCAAA chrXI:645230-645862 + 70 2.27e-06 TACCCTAGCG CTGCATTTCTTTTTT TCCTCAGTTG chrXV:677938-679195 + 86 2.27e-06 AATATTTTAT TTTCTTTTCATTTTT chrVII:609304-611473 + 69 2.56e-06 AGGAGGATCT ATTCTTTTTTTTCTT CTTCTCTTCT chrVII:878339-879034 - 51 2.88e-06 CATTTTATTA TTTAATTTTTTTTTT TTCGGAAAAA chrXI:589870-590561 - 65 3.14e-06 GCGTAGTTGC TTTTTTTCCTTTTCT ACTGAGTCAA chrVI:261078-261372 - 46 3.87e-06 TTCATTGTAT TTGCCTTCTTTTTTT CTTCGAAGCC chrIV:721588-722902 - 27 3.87e-06 TTATTTTTAT TATATTTTTTTTTTT CATTTGTTGG chrII:415524-415852 - 59 3.87e-06 TACAAGTTCG TCTCATTTCCTTTTT TACACCCATG chrXV:281996-282516 + 24 4.33e-06 TTCCGGGCTT GCGCATTTCTTTTTT GTCCACCACC chrX:396580-396680 - 2 4.33e-06 TTCCGGGCTT GCGCATTTCTTTTTT A chrVII:986759-987878 + 85 4.83e-06 GGTCTGCCCC TTTCGTTTTTTATTT T chrXIII:625856-627008 + 71 4.83e-06 GATCTCTTTG TTTCTTCTTTTTTTC CCGGAGAATA chrXIV:632429-632882 + 68 4.83e-06 ACTGGGGTCG TTTTTTTTCTTATTT CAGATAGTCT chrVI:191300-191790 - 6 5.29e-06 CCTGTCTGTG ACGCATTTCTTTTTT AAATT chrXII:83834-84474 + 11 5.96e-06 GAGTCTGATT TAGTATTTCTTTTTT GCCAGCCAGT chrXII:932104-932691 - 78 6.38e-06 ACTTCGTA TCTCTTTTTCTTTTG ATTCGGAATA chrXI:313168-313646 - 29 7.14e-06 GGAGATGGCA TTTTATTTTTTTCCT TTAGCCTTCA chrIV:520758-521391 + 80 7.14e-06 GCACAGCCCC TCGCATTTTTTTTCG ATACCC chrIV:449607-449983 + 9 7.86e-06 AAATACTT TTTTATTTTTTATTT TTAAACATAA chrIV:132713-133242 - 67 7.86e-06 GGCGCGAAGA GATCTTTTTTTTCTT TTACTACGTG chrXII:975809-976217 - 8 8.58e-06 CTCACTGGGG TCGTTTATTTTTTTT GCATTAA chrVII:706900-707328 - 1 8.58e-06 CCTTCCATGA AAGTTTTTTTTTTTT chrXIII:754415-754759 - 73 8.58e-06 CACAATCCTT CCTCATCTTTTTTTT GAGACTTTTA chrIX:257381-258160 + 4 8.58e-06 TAA ATTCGTTTCTTTTCT TAGTTAAAAT chrIV:368795-369234 - 35 8.58e-06 GAGCCCACAT TTGCGTTATTTTTTT TCCTCCGGCT chrIII:107150-107817 - 25 8.58e-06 TATACTTATT TTGCTTATTTTTCTT ATACTCAGGA chrXVI:435655-436165 - 23 8.58e-06 TCCTGAGTGC GAGCTTTCTTTTTTT CCAAAGAATT chrXVI:769010-769465 - 6 9.51e-06 CCTATGAGGA GTTCTTTACTTTTTT GCACG chrXI:578782-579271 + 84 9.51e-06 CCTATGAGGA GTTCTTTACTTTTTT AG chrXIV:725909-726382 - 23 1.02e-05 CATCCTTCAG TATTTTTTTTTATTT TGTCGGGGCC chrVIII:381458-383333 + 57 1.02e-05 ATGTAATTAG TTGTATCTTTTTTCT GTAATGGGGA chrX:90086-90186 + 72 1.02e-05 CCATACATGG CCTTGTTTTTTTTTT AACTGAAACT chrIV:802562-802964 - 6 1.13e-05 CCGGGTAGGA CCTCTTTTTATTTTT ACTCT chrX:662804-662904 + 79 1.13e-05 GATTTGTTTT TCGCTTTTCCTTCTT ATTTGTT chrVII:323417-324934 + 73 1.13e-05 TTACTGTGAT TTGCTTTTTCTTTCG CTCATGGCTT chrIV:541194-542032 - 2 1.23e-05 GTCATTCTTG CTGATTTTCTTTTTT C chrX:538363-538463 + 62 1.23e-05 GGAACGTTGA TTATTTTTTTTTTTT CGTTTCTTTA chrXIII:131569-132079 - 34 1.34e-05 CGTGAGTGCT TTGTTTCTTCTTTTT TGAATATGCT chrXVI:188562-189180 + 5 1.59e-05 ACTT ACGATTTTTTTTTTT TCGTTATGAA chrXI:46326-46987 - 35 1.89e-05 CTACTAGTAA TATCCTCTCTTTTTT CAAACAATGA chrXVI:404145-406041 + 24 2.05e-05 AGAGCCTTTG TTGAATTTTTTTCTT TTCGTTTTGT chrX:172664-172764 - 70 2.05e-05 GAGAGAATCC TCTCTTTCCTTCTCT ATTTTGCTCA chrXIII:320968-321320 - 39 2.05e-05 GGACTCGTCC ATTTTTTATTTTTTT GGCTAACTAA chrX:348777-348877 + 35 2.24e-05 CTAATACAGT TTTCGTTTCTTTTGT AATGTTCAGA chrVIII:475517-475905 - 22 2.40e-05 CATTTTAACA TCGATTTTTTTGTTT GTCATAGCCA chrXV:391444-392311 + 17 2.40e-05 GACGATGCTG CAGCATTTTTTTCTT GCGTCGAACT chrI:202298-203187 + 7 3.04e-05 GAAAAA TTTCCTCTTTTTCCT AATAAGGTGG chrI:182352-182757 - 6 3.52e-05 CCTGCAGTTG TCGTTATTTTTTTTT ACTGA chrX:291046-291146 - 14 3.52e-05 ACACCCAACT ATGCATTTTTTTTCC TAAACGAGCG chrXII:1028240-1028567 + 76 3.52e-05 TGGGTCATAA TTTTTTTTCTTGCCT TCAAAAATCG chrIV:667761-668232 - 47 3.52e-05 GCTAGAGACC ATTTTTATTTTTTCT CCTCTATTGT chrV:288237-288718 - 4 3.82e-05 CCTGCTGGTG TCGTTTTTTTTATTG TTA chrVII:147873-149464 - 72 3.82e-05 TACGTAAATA TCTCCTTCCCTTTTT GCCACGATCA chrXV:109520-110685 + 10 4.08e-05 TGCGGTTCT CCTCTTCTCTTGTTT CTTCGTGTTG chrIX:394277-395577 - 66 4.41e-05 GAAAAAAAAG GCTTTTTCTTTTTTG CCTTTCAGTT chrXIII:797918-798379 + 74 4.74e-05 AGGCACACCC TTTCTTCTCCTTTCG GGTATAAAGT chrVII:483221-484366 - 13 4.74e-05 TACGACATTT TTTCTTTACATTTCT TTACTAAACC chrXVI:40138-40668 + 79 5.46e-05 AGATAGCGAT GTTTGTTTTTTTTTC ACTTAAC chrVI:95481-95938 - 77 8.09e-05 TTGTTATCT TATCTTATCTTATCT TCTCCCTTAT chrXIII:650796-653066 + 66 8.09e-05 TATATATAGA TATCATATTTTCTTT TTAACTTAGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCTTTTTTTTTTT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXI:517796-518306 1.2e-08 67_[+3]_18 chrXII:48716-49112 1.2e-08 4_[-3]_81 chrXII:514839-515147 1.2e-08 18_[+3]_67 chrX:531620-531720 3.4e-08 57_[+3]_28 chrVII:1000064-1000689 4.2e-08 66_[-3]_19 chrXVI:452847-454137 4.2e-08 19_[-3]_66 chrXII:5-261 6.8e-08 51_[-3]_34 chrXV:1091144-1091290 6.8e-08 29_[+3]_56 chrXII:704182-704653 6.8e-08 79_[+3]_6 chrXVI:819345-820014 1e-07 35_[+3]_50 chrX:58764-58864 1e-07 25_[-3]_60 chrIII:162094-164163 1e-07 83_[-3]_2 chrXIV:444452-444794 1e-07 78_[+3]_7 chrV:51789-53045 1.1e-07 70_[-3]_15 chrXVI:678739-679481 1.3e-07 8_[+3]_77 chrVII:205322-206899 1.5e-07 36_[-3]_49 chrX:607519-607619 2.4e-07 81_[+3]_4 chrXII:366036-366577 2.4e-07 81_[+3]_4 chrXV:79765-80122 2.6e-07 77_[+3]_8 chrVIII:103874-104275 3.9e-07 78_[+3]_7 chrXII:722886-723427 6.7e-07 63_[-3]_22 chrXVI:880071-880561 7.5e-07 7_[-3]_78 chrXV:1003925-1004983 7.5e-07 76_[+3]_9 chrVI:221763-222047 9e-07 19_[-3]_66 chrVII:876209-876761 9e-07 30_[+3]_55 chrXI:260493-260939 1.1e-06 11_[-3]_74 chrXV:903659-904727 1.3e-06 [-3]_85 chrXII:808816-809644 1.3e-06 75_[-3]_10 chrIV:1344942-1345801 1.3e-06 [-3]_85 chrIV:591661-592878 1.5e-06 25_[+3]_60 chrIV:1156202-1156762 1.6e-06 26_[-3]_59 chrXII:489311-489580 1.6e-06 69_[+3]_16 chrI:185654-186092 1.8e-06 21_[-3]_64 chrXII:793731-797391 1.8e-06 10_[-3]_75 chrVII:700452-701222 2.1e-06 16_[+3]_69 chrXI:645230-645862 2.3e-06 69_[+3]_16 chrXV:677938-679195 2.3e-06 85_[+3] chrVII:609304-611473 2.6e-06 68_[+3]_17 chrVII:878339-879034 2.9e-06 50_[-3]_35 chrXI:589870-590561 3.1e-06 64_[-3]_21 chrVI:261078-261372 3.9e-06 45_[-3]_40 chrIV:721588-722902 3.9e-06 26_[-3]_59 chrII:415524-415852 3.9e-06 58_[-3]_27 chrXV:281996-282516 4.3e-06 23_[+3]_62 chrX:396580-396680 4.3e-06 1_[-3]_84 chrVII:986759-987878 4.8e-06 84_[+3]_1 chrXIII:625856-627008 4.8e-06 70_[+3]_15 chrXIV:632429-632882 4.8e-06 67_[+3]_18 chrVI:191300-191790 5.3e-06 5_[-3]_80 chrXII:83834-84474 6e-06 10_[+3]_75 chrXII:932104-932691 6.4e-06 77_[-3]_8 chrXI:313168-313646 7.1e-06 28_[-3]_57 chrIV:520758-521391 7.1e-06 79_[+3]_6 chrIV:449607-449983 7.9e-06 8_[+3]_77 chrIV:132713-133242 7.9e-06 66_[-3]_19 chrXII:975809-976217 8.6e-06 7_[-3]_78 chrVII:706900-707328 8.6e-06 [-3]_85 chrXIII:754415-754759 8.6e-06 72_[-3]_13 chrIX:257381-258160 8.6e-06 3_[+3]_82 chrIV:368795-369234 8.6e-06 34_[-3]_51 chrIII:107150-107817 8.6e-06 24_[-3]_61 chrXVI:435655-436165 8.6e-06 22_[-3]_63 chrXVI:769010-769465 9.5e-06 5_[-3]_80 chrXI:578782-579271 9.5e-06 83_[+3]_2 chrXIV:725909-726382 1e-05 22_[-3]_63 chrVIII:381458-383333 1e-05 56_[+3]_29 chrX:90086-90186 1e-05 71_[+3]_14 chrIV:802562-802964 1.1e-05 5_[-3]_80 chrX:662804-662904 1.1e-05 78_[+3]_7 chrVII:323417-324934 1.1e-05 72_[+3]_13 chrIV:541194-542032 1.2e-05 1_[-3]_84 chrX:538363-538463 1.2e-05 61_[+3]_24 chrXIII:131569-132079 1.3e-05 33_[-3]_52 chrXVI:188562-189180 1.6e-05 4_[+3]_81 chrXI:46326-46987 1.9e-05 34_[-3]_51 chrXVI:404145-406041 2e-05 23_[+3]_62 chrX:172664-172764 2e-05 69_[-3]_16 chrXIII:320968-321320 2e-05 38_[-3]_47 chrX:348777-348877 2.2e-05 34_[+3]_51 chrVIII:475517-475905 2.4e-05 21_[-3]_64 chrXV:391444-392311 2.4e-05 16_[+3]_69 chrI:202298-203187 3e-05 6_[+3]_79 chrI:182352-182757 3.5e-05 5_[-3]_80 chrX:291046-291146 3.5e-05 13_[-3]_72 chrXII:1028240-1028567 3.5e-05 75_[+3]_10 chrIV:667761-668232 3.5e-05 46_[-3]_39 chrV:288237-288718 3.8e-05 3_[-3]_82 chrVII:147873-149464 3.8e-05 71_[-3]_14 chrXV:109520-110685 4.1e-05 9_[+3]_76 chrIX:394277-395577 4.4e-05 65_[-3]_20 chrXIII:797918-798379 4.7e-05 73_[+3]_12 chrVII:483221-484366 4.7e-05 12_[-3]_73 chrXVI:40138-40668 5.5e-05 78_[+3]_7 chrVI:95481-95938 8.1e-05 76_[-3]_9 chrXIII:650796-653066 8.1e-05 65_[+3]_20 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCTTTTTTTTTTT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTCTTTTTTTTTTT width=15 seqs=95 chrXI:517796-518306 ( 68) TTTCTTTTTTTTTTT 1 chrXII:48716-49112 ( 5) TTTCTTTTTTTTTTT 1 chrXII:514839-515147 ( 19) TTTCTTTTTTTTTTT 1 chrX:531620-531720 ( 58) TTTCTTTTCTTTTTT 1 chrVII:1000064-1000689 ( 67) TTTCTTTTTTTTTCT 1 chrXVI:452847-454137 ( 20) TTTCTTTTTTTTTCT 1 chrXII:5-261 ( 52) TTTCATTTTTTTTTT 1 chrXV:1091144-1091290 ( 30) TTTCATTTTTTTTTT 1 chrXII:704182-704653 ( 80) TTTCATTTTTTTTTT 1 chrXVI:819345-820014 ( 36) TTTTTTTTTTTTTTT 1 chrX:58764-58864 ( 26) TTTTTTTTTTTTTTT 1 chrIII:162094-164163 ( 84) TCTCTTTTTTTTTCT 1 chrXIV:444452-444794 ( 79) TTTTTTTTTTTTTTT 1 chrV:51789-53045 ( 71) TATCTTTTTTTTTTT 1 chrXVI:678739-679481 ( 9) TTTCTTTCTTTTTTT 1 chrVII:205322-206899 ( 37) TCTCATTTTTTTTTT 1 chrX:607519-607619 ( 82) TTTTTTTTCTTTTTT 1 chrXII:366036-366577 ( 82) TTTCGTTTTTTTTTT 1 chrXV:79765-80122 ( 78) TTGCTTTCTTTTTTT 1 chrVIII:103874-104275 ( 79) TTGCTTTTTTTTCTT 1 chrXII:722886-723427 ( 64) TATTTTTTTTTTTTT 1 chrXVI:880071-880561 ( 8) TCTCTTTCTTTTTCT 1 chrXV:1003925-1004983 ( 77) CTTCATTTTTTTTTT 1 chrVI:221763-222047 ( 20) TTTCTTTTTTTTTCG 1 chrVII:876209-876761 ( 31) TTTCTTTTTTTCTTT 1 chrXI:260493-260939 ( 12) TCTCTTTTTTTGTTT 1 chrXV:903659-904727 ( 1) TTGTTTTCTTTTTTT 1 chrXII:808816-809644 ( 76) TTTCTTTTCTTTTTC 1 chrIV:1344942-1345801 ( 1) TTTCTTTTTATTTTT 1 chrIV:591661-592878 ( 26) TTTTTTTCCTTTTTT 1 chrIV:1156202-1156762 ( 27) AATCTTTTTTTTTTT 1 chrXII:489311-489580 ( 70) AATCTTTTTTTTTTT 1 chrI:185654-186092 ( 22) TTTTTTTCTTTTTCT 1 chrXII:793731-797391 ( 11) CTTCTTCTTTTTTTT 1 chrVII:700452-701222 ( 17) TAGCATTTTTTTTCT 1 chrXI:645230-645862 ( 70) CTGCATTTCTTTTTT 1 chrXV:677938-679195 ( 86) TTTCTTTTCATTTTT 1 chrVII:609304-611473 ( 69) ATTCTTTTTTTTCTT 1 chrVII:878339-879034 ( 51) TTTAATTTTTTTTTT 1 chrXI:589870-590561 ( 65) TTTTTTTCCTTTTCT 1 chrVI:261078-261372 ( 46) TTGCCTTCTTTTTTT 1 chrIV:721588-722902 ( 27) TATATTTTTTTTTTT 1 chrII:415524-415852 ( 59) TCTCATTTCCTTTTT 1 chrXV:281996-282516 ( 24) GCGCATTTCTTTTTT 1 chrX:396580-396680 ( 2) GCGCATTTCTTTTTT 1 chrVII:986759-987878 ( 85) TTTCGTTTTTTATTT 1 chrXIII:625856-627008 ( 71) TTTCTTCTTTTTTTC 1 chrXIV:632429-632882 ( 68) TTTTTTTTCTTATTT 1 chrVI:191300-191790 ( 6) ACGCATTTCTTTTTT 1 chrXII:83834-84474 ( 11) TAGTATTTCTTTTTT 1 chrXII:932104-932691 ( 78) TCTCTTTTTCTTTTG 1 chrXI:313168-313646 ( 29) TTTTATTTTTTTCCT 1 chrIV:520758-521391 ( 80) TCGCATTTTTTTTCG 1 chrIV:449607-449983 ( 9) TTTTATTTTTTATTT 1 chrIV:132713-133242 ( 67) GATCTTTTTTTTCTT 1 chrXII:975809-976217 ( 8) TCGTTTATTTTTTTT 1 chrVII:706900-707328 ( 1) AAGTTTTTTTTTTTT 1 chrXIII:754415-754759 ( 73) CCTCATCTTTTTTTT 1 chrIX:257381-258160 ( 4) ATTCGTTTCTTTTCT 1 chrIV:368795-369234 ( 35) TTGCGTTATTTTTTT 1 chrIII:107150-107817 ( 25) TTGCTTATTTTTCTT 1 chrXVI:435655-436165 ( 23) GAGCTTTCTTTTTTT 1 chrXVI:769010-769465 ( 6) GTTCTTTACTTTTTT 1 chrXI:578782-579271 ( 84) GTTCTTTACTTTTTT 1 chrXIV:725909-726382 ( 23) TATTTTTTTTTATTT 1 chrVIII:381458-383333 ( 57) TTGTATCTTTTTTCT 1 chrX:90086-90186 ( 72) CCTTGTTTTTTTTTT 1 chrIV:802562-802964 ( 6) CCTCTTTTTATTTTT 1 chrX:662804-662904 ( 79) TCGCTTTTCCTTCTT 1 chrVII:323417-324934 ( 73) TTGCTTTTTCTTTCG 1 chrIV:541194-542032 ( 2) CTGATTTTCTTTTTT 1 chrX:538363-538463 ( 62) TTATTTTTTTTTTTT 1 chrXIII:131569-132079 ( 34) TTGTTTCTTCTTTTT 1 chrXVI:188562-189180 ( 5) ACGATTTTTTTTTTT 1 chrXI:46326-46987 ( 35) TATCCTCTCTTTTTT 1 chrXVI:404145-406041 ( 24) TTGAATTTTTTTCTT 1 chrX:172664-172764 ( 70) TCTCTTTCCTTCTCT 1 chrXIII:320968-321320 ( 39) ATTTTTTATTTTTTT 1 chrX:348777-348877 ( 35) TTTCGTTTCTTTTGT 1 chrVIII:475517-475905 ( 22) TCGATTTTTTTGTTT 1 chrXV:391444-392311 ( 17) CAGCATTTTTTTCTT 1 chrI:202298-203187 ( 7) TTTCCTCTTTTTCCT 1 chrI:182352-182757 ( 6) TCGTTATTTTTTTTT 1 chrX:291046-291146 ( 14) ATGCATTTTTTTTCC 1 chrXII:1028240-1028567 ( 76) TTTTTTTTCTTGCCT 1 chrIV:667761-668232 ( 47) ATTTTTATTTTTTCT 1 chrV:288237-288718 ( 4) TCGTTTTTTTTATTG 1 chrVII:147873-149464 ( 72) TCTCCTTCCCTTTTT 1 chrXV:109520-110685 ( 10) CCTCTTCTCTTGTTT 1 chrIX:394277-395577 ( 66) GCTTTTTCTTTTTTG 1 chrXIII:797918-798379 ( 74) TTTCTTCTCCTTTCG 1 chrVII:483221-484366 ( 13) TTTCTTTACATTTCT 1 chrXVI:40138-40668 ( 79) GTTTGTTTTTTTTTC 1 chrVI:95481-95938 ( 77) TATCTTATCTTATCT 1 chrXIII:650796-653066 ( 66) TATCATATTTTCTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCTTTTTTTTTTT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 51600 bayes= 10.1749 E= 7.9e-069 -153 -104 -121 123 -95 31 -1321 98 -485 -1321 59 119 -227 174 -1321 -10 -40 -221 -141 110 -485 -1321 -1321 170 -253 -104 -1321 148 -253 -63 -1321 143 -1321 54 -1321 123 -285 -141 -1321 154 -1321 -1321 -1321 171 -227 -263 -221 150 -1321 -89 -1321 155 -1321 18 -421 133 -1321 -221 -141 154 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCTTTTTTTTTTT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 95 E= 7.9e-069 0.105263 0.094737 0.084211 0.715789 0.157895 0.242105 0.000000 0.600000 0.010526 0.000000 0.294737 0.694737 0.063158 0.652632 0.000000 0.284211 0.231579 0.042105 0.073684 0.652632 0.010526 0.000000 0.000000 0.989474 0.052632 0.094737 0.000000 0.852632 0.052632 0.126316 0.000000 0.821053 0.000000 0.284211 0.000000 0.715789 0.042105 0.073684 0.000000 0.884211 0.000000 0.000000 0.000000 1.000000 0.063158 0.031579 0.042105 0.863158 0.000000 0.105263 0.000000 0.894737 0.000000 0.221053 0.010526 0.768421 0.000000 0.042105 0.073684 0.884211 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCTTTTTTTTTTT MEME-3 regular expression -------------------------------------------------------------------------------- T[TC][TG][CT][TA]TTT[TC]TTTT[TC]T -------------------------------------------------------------------------------- Time 972.95 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:326600-327078 7.95e-08 13_[+1(3.20e-09)]_11_[+2(3.84e-06)]_\ 31 chrVIII:103874-104275 2.55e-03 78_[+3(3.85e-07)]_7 chrXV:24408-25087 3.38e-01 100 chrVI:269837-270159 1.76e-01 100 chrXI:108755-109058 8.33e-01 100 chrI:81937-82263 6.79e-01 100 chrIV:1344942-1345801 6.96e-03 [-3(1.28e-06)]_85 chrXVI:828789-829454 9.33e-01 100 chrXIII:556962-557666 3.15e-01 100 chrVII:436861-438134 6.90e-01 100 chrVII:328405-328950 2.56e-01 100 chrXI:260493-260939 4.43e-03 11_[-3(1.15e-06)]_74 chrIV:543573-544004 7.62e-01 100 chrIII:3-1300 6.78e-01 100 chrXVI:435655-436165 2.00e-07 22_[-3(8.58e-06)]_6_[+1(1.66e-08)]_\ 31 chrIV:992636-993030 4.50e-04 55_[-2(2.38e-07)]_26 chrXI:458416-458936 1.81e-02 100 chrIX:323999-324570 2.25e-01 100 chrXIV:546966-547397 1.67e-06 28_[-1(7.53e-10)]_46 chrIV:835779-836244 8.76e-01 100 chrXII:262855-264173 7.95e-01 100 chrIX:316156-316583 9.23e-01 100 chrII:164865-165887 3.70e-01 100 chrXI:326073-327586 1.67e-01 100 chrXVI:188562-189180 3.23e-04 4_[+3(1.59e-05)]_31_[-1(9.81e-05)]_\ 24 chrVII:345849-346694 6.58e-02 28_[+1(6.52e-05)]_46 chrXV:677938-679195 1.45e-02 30_[+3(1.13e-05)]_40_[+3(2.27e-06)] chrXI:614774-615289 4.55e-02 100 chrVII:787010-788747 7.81e-01 100 chrXV:796800-797445 6.05e-03 16_[-1(1.66e-05)]_58 chrXIII:91060-92096 4.24e-01 100 chrV:77443-79831 7.48e-01 100 chrXVI:585674-587829 8.47e-01 100 chrII:405679-406266 7.28e-07 44_[-2(2.76e-06)]_9_[-1(3.12e-07)]_\ 2 chrIV:568698-569208 4.41e-11 13_[-1(8.24e-12)]_28_[-2(2.76e-06)]_\ 14 chrXV:619039-624630 4.91e-01 100 chrIV:667761-668232 7.96e-10 46_[-3(3.52e-05)]_10_[+1(9.75e-12)]_\ 3 chrXIII:731991-733570 3.03e-01 100 chrVI:210476-210869 1.44e-08 7_[+1(3.20e-09)]_26_[+2(7.29e-07)]_\ 22 chrXII:710388-710966 1.27e-01 100 chrVIII:105042-105873 6.02e-01 100 chrX:374223-374323 1.38e-08 31_[+1(8.24e-12)]_43 chrVII:276966-278733 4.03e-01 100 chrVIII:175011-175546 1.03e-01 100 chrXII:808816-809644 5.18e-03 75_[-3(1.28e-06)]_10 chrXIII:267661-268353 7.22e-01 100 chrXIV:88901-90050 5.61e-01 100 chrXIV:715987-716663 1.18e-01 100 chrVII:364891-366760 9.74e-01 100 chrXVI:775607-776029 6.54e-05 7_[+1(1.66e-08)]_67 chrXII:1064063-1065349 7.03e-01 100 chrIV:1488993-1490514 3.06e-02 12_[+1(6.52e-05)]_62 chrXV:520410-521056 7.80e-01 100 chrXIII:253321-253582 5.62e-01 100 chrVII:856575-857037 3.01e-01 100 chrXI:513198-513608 2.27e-03 24_[+2(2.76e-06)]_57 chrX:197183-197283 7.30e-06 24_[+2(1.33e-09)]_57 chrVI:167289-167664 1.61e-08 17_[-2(7.29e-07)]_26_[-1(3.20e-09)]_\ 12 chrXVI:340547-340989 8.74e-01 100 chrVI:64011-65335 6.44e-01 100 chrXI:229752-231759 3.20e-01 100 chrXII:780709-781856 5.20e-01 100 chrXI:578782-579271 1.44e-07 47_[-1(2.64e-09)]_10_[+3(9.51e-06)]_\ 2 chrX:617765-617865 1.32e-05 28_[-2(1.67e-09)]_53 chrV:151730-153572 1.48e-01 100 chrIV:946162-946605 8.60e-06 30_[-1(3.20e-09)]_44 chrVII:110425-110899 1.74e-04 23_[+1(1.67e-07)]_51 chrXIII:320968-321320 2.05e-07 38_[-3(2.05e-05)]_10_[+1(1.77e-09)]_\ 11 chrXIII:913718-915817 5.50e-01 100 chrXII:1051910-1052366 1.61e-05 30_[+2(1.33e-09)]_51 chrXII:426933-427404 5.92e-07 20_[-2(2.76e-06)]_9_[-1(3.12e-07)]_\ 26 chrVII:959281-959701 2.94e-01 100 chrXI:38664-39263 4.57e-01 100 chrXI:490780-491229 7.68e-09 20_[-2(7.92e-07)]_10_[-1(2.64e-09)]_\ 25 chrXII:948943-953590 5.35e-01 100 chrII:697425-697996 4.05e-01 100 chrV:212184-212484 8.00e-01 100 chrXII:281948-283924 6.96e-01 100 chrIV:1055876-1056320 4.45e-01 100 chrXII:5492-5924 4.56e-01 100 chrIII:107150-107817 3.19e-02 24_[-3(8.58e-06)]_61 chrXVI:560095-560471 7.12e-04 30_[+2(1.23e-07)]_18_[+2(5.48e-05)]_\ 14 chrVI:4496-5429 4.72e-01 100 chrXIV:632429-632882 5.26e-13 [-2(9.49e-09)]_11_[-1(4.24e-09)]_11_\ [+3(4.83e-06)]_18 chrVII:765951-766664 2.90e-01 100 chrXII:253211-253688 3.69e-01 100 chrI:198283-199009 9.61e-01 100 chrXII:875224-875632 1.32e-10 4_[-2(5.57e-09)]_33_[-1(2.64e-09)]_\ 18 chrXV:967995-968439 1.08e-01 100 chrVII:1069147-1069614 3.46e-01 100 chrVI:204826-205169 1.54e-06 23_[+2(1.33e-09)]_58 chrIII:68441-68637 7.95e-01 100 chrXV:1053824-1054449 3.79e-01 100 chrIV:129912-130967 1.84e-01 100 chrXV:168004-168498 6.91e-01 100 chrVII:650866-651298 5.64e-02 100 chrXVI:338746-339135 9.31e-01 100 chrXII:448377-448926 1.73e-06 59_[+1(1.80e-10)]_15 chrXVI:821638-822413 5.62e-01 100 chrII:415524-415852 1.34e-02 58_[-3(3.87e-06)]_27 chrV:441851-442620 9.09e-01 100 chrIII:28578-31127 8.80e-01 100 chrXVI:608182-608587 9.95e-01 100 chrXII:1017671-1019371 9.03e-01 100 chrXII:214702-215139 5.11e-13 23_[+1(3.97e-11)]_10_[+2(1.06e-09)]_\ 22 chrII:555491-558491 3.20e-01 100 chrVII:1050134-1050720 9.30e-01 100 chrXVI:930590-931085 2.47e-01 100 chrXII:1028240-1028567 4.08e-02 75_[+3(3.52e-05)]_10 chrXV:109520-110685 8.60e-02 9_[+3(4.08e-05)]_76 chrII:266199-266643 4.10e-11 13_[-2(9.49e-09)]_10_[-1(3.77e-10)]_\ 32 chrIX:21948-22218 2.38e-01 100 chrIV:410206-410689 2.90e-07 17_[-1(1.77e-09)]_57 chrVI:162051-162427 9.58e-11 45_[-2(2.38e-07)]_8_[-1(8.09e-11)]_\ 2 chrIX:388075-389311 7.91e-01 100 chrXVI:942421-942743 4.44e-02 100 chrXV:505046-505477 4.31e-01 100 chrXII:921362-922534 7.18e-01 100 chrIV:1507064-1507650 2.56e-01 100 chrXV:391444-392311 3.62e-03 16_[+3(2.40e-05)]_69 chrVII:661568-661941 7.82e-02 100 chrXIII:549884-553215 9.01e-01 100 chrVIII:74586-76489 2.86e-01 100 chrIV:490000-491258 1.21e-01 100 chrV:250123-250534 1.50e-10 14_[-2(2.45e-06)]_9_[-1(1.80e-10)]_\ 32 chrI:166066-166560 4.56e-13 10_[-2(1.06e-09)]_10_[-1(3.97e-11)]_\ 35 chrXV:1025751-1026040 3.56e-01 100 chrII:372810-378559 5.18e-01 100 chrXV:842381-842947 1.81e-01 100 chrX:360518-360618 1.14e-01 69_[+2(4.37e-05)]_12 chrVII:561457-561923 2.58e-06 77_[+2(1.67e-09)]_4 chrX:223743-223843 1.24e-01 100 chrXII:514839-515147 1.35e-05 18_[+3(1.18e-08)]_35_[+3(2.56e-06)]_\ 17 chrXII:48716-49112 8.56e-05 4_[-3(1.18e-08)]_81 chrIV:465054-465627 7.99e-02 100 chrI:141596-143691 6.58e-01 100 chrXIV:426758-427284 9.97e-01 100 chrIV:1150489-1151153 2.23e-01 100 chrVII:440501-443132 4.64e-01 100 chrXI:355198-356477 7.14e-01 100 chrXI:202848-203301 4.33e-08 10_[-1(1.15e-11)]_64 chrV:130858-131373 8.98e-10 27_[+1(2.96e-10)]_9_[+2(2.45e-06)]_\ 19 chrXI:430548-431670 9.41e-01 100 chrXV:638835-639426 9.95e-01 100 chrX:204524-204624 2.04e-06 42_[-2(2.76e-06)]_9_[-1(3.12e-07)]_\ 4 chrII:371353-371954 5.50e-02 100 chrVII:405312-405704 3.82e-08 46_[-1(8.24e-12)]_28 chrX:378171-378271 3.16e-04 45_[-2(8.53e-08)]_36 chrX:651169-651269 2.30e-01 100 chrIII:168135-168567 8.48e-10 10_[+1(1.80e-10)]_9_[+2(2.45e-06)]_\ 36 chrXIII:861180-861438 4.88e-01 100 chrVII:882196-884599 1.18e-01 100 chrXIII:408113-408938 5.05e-01 100 chrIV:437568-437981 1.16e-05 54_[-2(1.67e-09)]_27 chrI:14723-15100 7.10e-01 100 chrV:117620-118280 6.99e-01 100 chrVII:516335-516634 9.03e-01 100 chrVIII:451294-453079 1.19e-01 100 chrIV:217170-218071 3.98e-01 100 chrXII:366036-366577 3.78e-05 26_[+1(5.99e-05)]_29_[+3(2.43e-07)]_\ 4 chrVII:989723-990606 5.59e-01 100 chrII:431182-431568 2.05e-01 14_[-3(9.21e-05)]_71 chrV:469287-469692 7.03e-10 24_[-2(8.53e-08)]_11_[-1(1.16e-09)]_\ 20 chrVII:122048-122523 5.22e-12 40_[-2(3.34e-08)]_10_[-1(1.15e-11)]_\ 5 chrIV:1362263-1362685 5.76e-01 100 chrXII:241576-241997 5.25e-02 100 chrXII:962811-963336 3.01e-06 6_[+2(6.67e-09)]_75 chrVII:1083519-1084376 5.99e-01 100 chrX:354053-354153 1.62e-08 26_[-2(7.29e-07)]_26_[-1(3.20e-09)]_\ 3 chrIV:520758-521391 1.10e-02 38_[+3(1.02e-05)]_26_[+3(7.14e-06)]_\ 6 chrVIII:562296-562587 7.60e-01 100 chrXV:161106-161389 4.69e-01 100 chrII:813012-813182 1.39e-01 100 chrXIV:6512-7267 1.49e-01 31_[+2(6.65e-05)]_50 chrIV:234280-234712 8.74e-01 100 chrXIV:560543-561001 1.25e-04 17_[+2(9.49e-09)]_64 chrII:662470-662855 6.42e-01 100 chrXIV:442825-444230 9.55e-01 100 chrX:120058-120158 9.78e-01 100 chrV:461600-462269 2.44e-01 100 chrXII:837590-839637 7.06e-01 100 chrXVI:856776-857219 3.58e-01 100 chrV:311387-312287 9.26e-01 100 chrVIII:16629-18260 4.32e-01 100 chrIV:368795-369234 1.38e-02 34_[-3(8.58e-06)]_51 chrII:350619-351145 3.07e-10 1_[-2(2.45e-06)]_9_[-1(1.80e-10)]_\ 45 chrX:607519-607619 6.59e-04 81_[+3(2.43e-07)]_4 chrIX:174847-175237 4.04e-11 45_[-2(9.49e-09)]_10_[-1(3.77e-10)] chrIX:300051-300472 2.35e-12 27_[+1(1.15e-11)]_10_[+2(3.34e-08)]_\ 18 chrXII:489311-489580 1.87e-05 2_[-2(7.00e-06)]_48_[+3(1.65e-06)]_\ 16 chrXII:368202-371394 9.04e-01 100 chrVII:794206-794593 1.48e-06 74_[-2(1.06e-09)]_7 chrXII:731929-732259 1.28e-05 52_[-2(1.67e-09)]_29 chrII:645021-645393 2.34e-07 44_[-1(8.09e-11)]_30 chrXVI:112933-114830 5.07e-01 100 chrVII:968801-969228 5.12e-01 100 chrXV:3-990 8.13e-01 100 chrX:348777-348877 4.11e-02 34_[+3(2.24e-05)]_51 chrVIII:34379-36120 5.96e-01 100 chrX:115700-115800 3.54e-09 3_[+2(4.89e-05)]_26_[+1(8.09e-11)]_\ 26 chrXV:79765-80122 1.62e-03 77_[+3(2.55e-07)]_8 chrXIII:756364-756801 4.00e-01 100 chrXIII:23725-26537 1.34e-01 100 chrXIV:499297-501941 5.89e-01 100 chrVII:412147-412555 9.35e-10 3_[+1(1.16e-09)]_11_[+2(8.53e-08)]_\ 41 chrI:210924-211110 4.53e-01 100 chrV:396217-396564 2.56e-02 100 chrX:21477-21577 8.67e-01 100 chrII:140317-140870 5.68e-01 100 chrIX:254246-254573 1.43e-01 100 chrIV:83351-83791 2.05e-10 33_[-2(2.38e-07)]_8_[-1(8.09e-11)]_\ 14 chrII:429197-429761 4.51e-01 100 chrXVI:452847-454137 3.06e-04 19_[-3(4.18e-08)]_66 chrXII:187266-187916 1.10e-02 14_[+2(6.65e-05)]_67 chrXV:234271-234762 1.18e-01 100 chrI:229291-230194 5.03e-01 100 chrIII:295292-295824 3.94e-06 11_[-1(3.77e-10)]_63 chrXVI:406197-407768 7.66e-01 100 chrIV:1175619-1176054 2.97e-04 49_[-2(3.23e-07)]_32 chrV:241901-242601 3.20e-01 100 chrXIII:510655-511678 3.85e-01 100 chrX:531620-531720 1.47e-11 19_[-1(8.09e-11)]_12_[+3(3.43e-08)]_\ 28 chrIV:434039-434514 4.93e-06 48_[+1(3.77e-10)]_26 chrXV:1027872-1029516 7.75e-02 100 chrIX:177560-178092 6.40e-01 100 chrXIII:747737-748134 2.09e-08 17_[+1(8.24e-12)]_57 chrV:490870-491956 8.14e-01 100 chrXII:651029-651283 6.79e-01 100 chrII:378793-379297 2.69e-01 100 chrXII:941016-941261 3.78e-01 100 chrVII:323417-324934 2.57e-02 72_[+3(1.13e-05)]_13 chrXV:903659-904727 2.72e-03 [-3(1.28e-06)]_85 chrVII:401384-401751 4.35e-07 20_[+1(8.09e-11)]_54 chrXV:758989-759576 2.82e-01 100 chrXI:665719-666809 7.91e-01 100 chrIX:1-221 2.14e-01 100 chrXIII:195928-196377 6.71e-04 42_[+2(5.64e-07)]_39 chrVII:205322-206899 8.84e-04 15_[-3(7.11e-05)]_6_[-3(1.46e-07)]_\ 49 chrXIII:362865-363303 7.25e-05 64_[-1(1.67e-07)]_10 chrXIII:880420-881120 3.51e-01 100 chrXI:219627-220078 9.05e-01 100 chrII:89662-89956 4.11e-01 100 chrIX:394277-395577 1.10e-01 65_[-3(4.41e-05)]_20 chrVI:137274-137773 3.72e-10 23_[+1(4.24e-09)]_11_[+2(9.49e-09)]_\ 21 chrXV:382935-383518 3.61e-01 100 chrIV:308020-310169 6.84e-01 100 chrXVI:769010-769465 1.44e-07 5_[-3(9.51e-06)]_10_[+1(2.64e-09)]_\ 44 chrIV:599503-600388 2.82e-01 100 chrXV:443671-444172 9.35e-01 100 chrX:293768-293868 1.12e-01 100 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chrVII:609304-611473 1.37e-02 68_[+3(2.56e-06)]_17 chrXVI:819345-820014 6.65e-04 35_[+3(1.01e-07)]_50 chrVII:726452-726767 1.88e-01 100 chrXIV:602127-602547 3.65e-14 31_[-2(1.33e-09)]_11_[-1(9.75e-12)]_\ 13 chrXV:1091144-1091290 1.21e-04 29_[+3(6.80e-08)]_56 chrVI:82024-84414 2.15e-01 100 chrIV:976995-977183 6.50e-01 100 chrX:390843-390943 3.46e-09 30_[+1(3.20e-09)]_10_[+2(3.23e-07)]_\ 15 chrI:202298-203187 4.72e-02 6_[+3(3.04e-05)]_79 chrXII:818482-820528 5.52e-01 100 chrXIV:738811-739940 4.17e-01 100 chrV:335458-335893 2.48e-01 100 chrXIV:776609-777211 3.92e-01 100 chrX:538363-538463 4.38e-08 20_[-1(9.39e-10)]_14_[+3(7.14e-06)]_\ 25 chrXI:146785-147335 5.51e-01 100 chrIV:591661-592878 5.61e-03 25_[+3(1.45e-06)]_60 chrXI:1-1041 7.28e-01 100 chrII:477104-477772 5.24e-03 51_[-2(1.30e-05)]_30 chrVII:876209-876761 3.00e-03 30_[+3(9.01e-07)]_55 chrXV:925208-925424 4.67e-01 100 chrIV:538823-539324 6.22e-01 100 chrVII:576465-577420 3.37e-01 100 chrVII:823292-823690 4.04e-04 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3_[-3(3.82e-05)]_53_[+2(1.67e-09)]_\ 10 chrX:424283-424383 6.80e-06 45_[+2(6.67e-09)]_36 chrXV:226465-226857 1.58e-10 10_[+1(8.09e-11)]_8_[+2(2.38e-07)]_\ 37 chrXII:11041-11987 7.97e-03 68_[+2(1.35e-06)]_13 chrX:703273-703373 4.44e-01 100 chrVI:224874-225393 3.97e-01 100 chrVII:845482-845912 6.79e-11 8_[-2(2.38e-07)]_8_[-1(8.09e-11)]_\ 39 chrV:23357-24058 4.00e-01 100 chrXIV:239940-240290 8.90e-01 100 chrIV:411250-411665 1.89e-01 100 chrXIV:96039-96607 9.16e-03 13_[+2(1.78e-06)]_17_[-2(1.34e-05)]_\ 32 chrIV:1201520-1202108 8.72e-09 21_[-1(1.15e-11)]_53 chrXVI:810488-810866 7.79e-05 55_[-2(9.49e-09)]_26 chrXIII:224082-224342 3.83e-01 100 chrXV:92100-94810 3.53e-01 100 chrIV:1233712-1234065 9.94e-01 100 chrIX:336112-336615 2.99e-06 46_[+1(3.12e-07)]_9_[+2(2.76e-06)] chrVIII:531440-531719 6.92e-01 100 chrIV:1359236-1361207 9.57e-01 100 chrXII:5-261 1.01e-04 51_[-3(6.80e-08)]_34 chrIII:227787-228206 5.01e-06 2_[-2(1.67e-09)]_79 chrXI:589870-590561 7.09e-03 64_[-3(3.14e-06)]_21 chrIV:1075327-1075739 7.87e-02 35_[+2(8.41e-05)]_46 chrXVI:172869-174128 8.85e-01 100 chrXVI:296987-297315 3.62e-01 100 chrXIII:572755-573111 6.95e-09 10_[+1(3.20e-09)]_10_[+2(3.23e-07)]_\ 35 chrXII:605146-605617 1.84e-04 75_[+2(8.53e-08)]_6 chrXII:784187-784657 6.90e-02 100 chrXIII:837747-838228 9.44e-07 42_[-1(3.20e-09)]_32 chrIX:137968-139445 8.15e-01 100 chrXVI:880071-880561 4.31e-17 7_[-3(7.53e-07)]_18_[+1(9.75e-12)]_\ 11_[+2(1.33e-09)]_4 chrVII:592432-593028 5.01e-01 100 chrXV:300878-301408 2.22e-09 10_[-2(5.64e-07)]_39_[-1(7.53e-10)]_\ 6 chrIV:550833-551528 8.98e-01 100 chrIV:579069-580796 5.34e-02 100 chrXIII:472876-473191 2.14e-01 100 chrXVI:901604-901910 3.34e-01 100 chrXIV:503052-503429 9.55e-01 100 chrXIII:279750-280330 2.83e-01 100 chrXV:742259-742856 5.36e-01 100 chrI:180944-181443 1.31e-04 4_[-2(3.23e-07)]_77 chrVIII:379555-379891 1.52e-02 58_[+1(3.78e-05)]_16 chrXV:161554-162084 2.31e-01 100 chrXII:636727-640193 1.33e-01 76_[+2(9.44e-05)]_5 chrVII:541634-542147 1.88e-08 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chrIV:1305420-1306233 6.98e-01 100 chrII:167084-168393 8.70e-01 100 chrXVI:645230-645859 9.68e-01 100 chrXV:216266-216710 8.69e-01 100 chrXIII:504692-505218 1.63e-01 100 chrV:487121-487626 6.17e-07 18_[+1(8.09e-11)]_56 chrVII:736204-736541 2.84e-08 52_[-1(8.24e-12)]_22 chrI:28262-29426 1.67e-01 100 chrVIII:475517-475905 2.28e-07 21_[-3(2.40e-05)]_19_[+1(2.64e-09)]_\ 19 chrVII:115298-115750 1.32e-10 20_[-2(5.57e-09)]_33_[-1(2.64e-09)]_\ 2 chrIV:118440-118829 5.47e-01 100 chrXVI:520045-520836 2.48e-01 100 chrVIII:388672-389183 2.27e-06 26_[+1(7.53e-10)]_48 chrVIII:292779-293547 7.74e-01 100 chrXIII:388078-388665 2.32e-01 100 chrXVI:463892-464230 3.90e-01 100 chrVII:15-941 8.58e-01 100 chrVIII:134100-134585 3.55e-09 35_[-2(2.45e-06)]_9_[-1(1.80e-10)]_\ 11 chrXI:140759-142199 3.11e-01 100 chrXV:281996-282516 1.04e-02 23_[+3(4.33e-06)]_62 chrIV:1449902-1451246 1.28e-01 100 chrXVI:502379-503262 7.65e-01 100 chrXVI:622360-622855 1.57e-04 48_[+2(1.23e-07)]_33 chrXVI:572059-572575 7.09e-11 8_[-2(2.38e-07)]_8_[-1(8.09e-11)]_\ 39 chrIV:449607-449983 2.43e-02 8_[+3(7.86e-06)]_60_[-3(9.21e-05)]_\ 2 chrIX:141705-142245 9.11e-01 100 chrIX:248661-249577 7.01e-01 100 chrVI:180698-181219 4.90e-01 100 chrXII:722886-723427 2.21e-03 63_[-3(6.65e-07)]_22 chrXIII:378959-379585 1.76e-01 100 chrVII:73682-74158 1.32e-04 6_[+2(8.53e-08)]_50_[-2(2.92e-06)]_\ 6 chrVII:878339-879034 4.48e-03 50_[-3(2.88e-06)]_35 chrVII:625166-625583 8.72e-01 100 chrVII:951345-951723 2.55e-01 100 chrIX:210533-210920 5.12e-08 25_[-1(9.75e-12)]_49 chrXIII:625856-627008 1.47e-02 70_[+3(4.83e-06)]_15 chrVIII:374353-375827 8.52e-01 100 chrXIV:567924-568494 1.13e-06 21_[-1(7.53e-10)]_53 chrII:642867-643255 5.72e-05 6_[+1(1.66e-08)]_68 chrIV:27-351 2.94e-01 100 chrXV:989010-989605 4.82e-02 100 chrV:377850-378665 8.23e-01 100 chrXI:518651-519353 5.04e-01 100 chrXVI:770567-771098 6.58e-01 100 chrVII:706900-707328 2.17e-07 [-3(8.58e-06)]_39_[+1(1.66e-08)]_20 chrX:22712-22812 8.46e-01 100 chrVIII:466787-467249 3.21e-05 56_[-1(3.04e-08)]_18 chrXV:854043-854421 6.35e-13 15_[+1(3.97e-11)]_10_[+2(1.06e-09)]_\ 30 chrX:90086-90186 3.28e-02 71_[+3(1.02e-05)]_14 chrXI:379489-379918 9.37e-10 33_[-2(8.53e-08)]_11_[-1(1.16e-09)]_\ 11 chrVII:986759-987878 1.06e-03 84_[+3(4.83e-06)]_1 chrXIII:5351-5763 9.73e-01 100 chrVIII:505846-506175 5.27e-01 100 chrVIII:381458-383333 1.46e-02 56_[+3(1.02e-05)]_29 chrVIII:115113-116361 5.73e-01 100 chrV:6164-6666 2.05e-01 100 chrXI:313168-313646 2.96e-06 28_[-3(7.14e-06)]_11_[+1(1.67e-07)]_\ 20 chrXII:728091-728739 8.84e-01 100 chrX:181909-182009 7.17e-02 100 chrXIII:131569-132079 9.64e-10 33_[-3(1.34e-05)]_13_[+1(8.24e-12)]_\ 13 chrX:414812-414912 2.10e-13 [-2(3.34e-08)]_10_[-1(1.15e-11)]_45 chrXIII:420106-420843 3.45e-01 100 chrI:185654-186092 7.29e-04 21_[-3(1.80e-06)]_64 chrXIV:725909-726382 1.98e-03 22_[-3(1.02e-05)]_63 chrXVI:566882-567229 8.67e-01 100 chrV:435571-435996 4.14e-13 29_[+1(1.15e-11)]_10_[+2(3.34e-08)]_\ 16 chrVI:19304-19940 1.09e-01 60_[-3(9.79e-05)]_25 chrXII:975809-976217 9.04e-13 7_[-3(8.58e-06)]_8_[+1(4.24e-09)]_\ 11_[+2(9.49e-09)]_14 chrIV:645020-645361 3.69e-09 23_[+1(1.80e-10)]_9_[+2(2.45e-06)]_\ 23 chrIV:355169-357795 5.25e-01 100 chrXI:385132-385494 2.09e-01 100 chrVII:828469-828967 1.34e-07 65_[+1(8.24e-12)]_9 chrXV:980507-981003 5.38e-06 45_[-1(7.53e-10)]_29 chrI:189763-190663 4.80e-01 100 chrVII:677783-678068 3.49e-02 1_[+2(5.69e-05)]_80 chrXV:232091-232406 3.74e-01 100 chrIII:298956-299443 2.77e-01 100 chrXII:673141-674528 8.42e-01 100 chrIV:541194-542032 2.69e-02 1_[-3(1.23e-05)]_84 chrIX:68232-68505 4.37e-01 100 chrXVI:794492-796085 5.15e-01 100 chrVIII:521790-522333 6.97e-01 100 chrIV:802562-802964 1.11e-11 5_[-3(1.13e-05)]_8_[+1(1.80e-10)]_9_\ [+2(2.45e-06)]_18 chrV:569437-570103 9.69e-01 100 chrIV:619736-620202 4.78e-06 60_[+1(2.64e-09)]_14 chrVI:221763-222047 4.96e-03 19_[-3(9.01e-07)]_66 chrVII:533788-535197 8.18e-01 100 chrXIII:352108-352534 4.66e-08 15_[-2(1.23e-07)]_28_[-1(6.87e-08)]_\ 12 chrV:61005-62139 9.43e-02 100 chrI:138972-139337 1.29e-04 54_[-2(5.64e-07)]_27 chrVII:310515-312264 8.64e-01 100 chrXI:517796-518306 2.26e-10 22_[-1(1.77e-09)]_19_[+3(1.18e-08)]_\ 18 chrXI:581042-581365 1.24e-01 67_[+2(6.15e-05)]_14 chrXI:162326-162705 6.59e-08 32_[+1(8.24e-12)]_42 chrXII:424033-424523 9.81e-01 100 chrXV:27488-28148 2.60e-01 100 chrXI:46326-46987 5.93e-02 34_[-3(1.89e-05)]_51 chrV:42098-42547 4.65e-01 100 chrXIII:463340-463869 2.47e-06 6_[-2(2.76e-06)]_9_[-1(3.12e-07)]_\ 40 chrXIV:495212-495638 3.37e-01 100 chrXII:234514-235021 4.18e-01 100 chrIII:127552-127913 8.21e-11 40_[-2(9.49e-09)]_11_[-1(4.24e-09)]_\ 4 chrXV:80413-83455 6.78e-02 69_[-2(5.08e-05)]_12 chrIII:82387-82749 3.30e-01 100 chrIV:1461518-1462038 4.83e-04 75_[+2(3.23e-07)]_6 chrXVI:404145-406041 3.86e-02 23_[+3(2.05e-05)]_62 chrVII:254154-254716 4.20e-01 100 chrVII:479156-482965 3.64e-01 100 chrXVI:425241-425665 9.20e-01 100 chrXIV:351545-352935 1.69e-01 100 chrIV:1300250-1301306 9.71e-01 100 chrXI:74444-74948 1.88e-06 14_[-1(4.24e-09)]_60 chrV:53540-53913 4.74e-01 100 chrX:745109-745209 6.59e-03 69_[-2(1.35e-06)]_12 chrIV:545962-546458 3.79e-01 100 chrIV:519584-519908 3.47e-06 53_[-2(6.67e-09)]_28 chrXII:568035-570837 5.94e-01 100 chrXI:93733-94101 8.22e-01 100 chrII:9392-9851 3.56e-06 18_[-2(6.67e-09)]_63 chrXIII:650796-653066 1.41e-01 65_[+3(8.09e-05)]_20 chrXIII:826480-826886 2.10e-01 100 chrVI:95481-95938 6.95e-02 76_[-3(8.09e-05)]_9 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************