******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--RIM101/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrI:5-1117 1.0000 100 chrI:81860-82285 1.0000 100 chrI:138913-139348 1.0000 100 chrI:141643-141885 1.0000 100 chrI:142115-143709 1.0000 100 chrI:166051-166586 1.0000 100 chrI:180923-181474 1.0000 100 chrI:182347-182787 1.0000 100 chrI:229153-230193 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chrXV:300861-301470 1.0000 100 chrXV:340131-340598 1.0000 100 chrXV:353863-354318 1.0000 100 chrXV:407679-408201 1.0000 100 chrXV:438444-439038 1.0000 100 chrXV:444711-446169 1.0000 100 chrXV:464241-464781 1.0000 100 chrXV:487240-487735 1.0000 100 chrXV:505116-505494 1.0000 100 chrXV:571431-572172 1.0000 100 chrXV:594013-594683 1.0000 100 chrXV:619689-624465 1.0000 100 chrXV:663480-664261 1.0000 100 chrXV:677927-679205 1.0000 100 chrXV:710013-710499 1.0000 100 chrXV:759108-759528 1.0000 100 chrXV:779701-780952 1.0000 100 chrXV:832341-832797 1.0000 100 chrXV:842387-842929 1.0000 100 chrXV:854019-854435 1.0000 100 chrXV:866537-868141 1.0000 100 chrXV:900036-901227 1.0000 100 chrXV:901447-901674 1.0000 100 chrXV:925200-925423 1.0000 100 chrXV:963697-966481 1.0000 100 chrXV:968126-968436 1.0000 100 chrXV:976194-976737 1.0000 100 chrXV:977921-978248 1.0000 100 chrXV:978816-979130 1.0000 100 chrXV:980480-981050 1.0000 100 chrXV:1003922-1004938 1.0000 100 chrXV:1015355-1015513 1.0000 100 chrXV:1015740-1017328 1.0000 100 chrXV:1025708-1026249 1.0000 100 chrXV:1027483-1029222 1.0000 100 chrXVI:55848-56503 1.0000 100 chrXVI:75974-76731 1.0000 100 chrXVI:135522-135852 1.0000 100 chrXVI:172850-174124 1.0000 100 chrXVI:188177-189084 1.0000 100 chrXVI:209798-210508 1.0000 100 chrXVI:280579-281906 1.0000 100 chrXVI:282081-282966 1.0000 100 chrXVI:302646-302974 1.0000 100 chrXVI:338690-339165 1.0000 100 chrXVI:377928-378460 1.0000 100 chrXVI:378658-379018 1.0000 100 chrXVI:404564-405830 1.0000 100 chrXVI:406205-407819 1.0000 100 chrXVI:435614-436201 1.0000 100 chrXVI:520138-520529 1.0000 100 chrXVI:559987-560506 1.0000 100 chrXVI:571959-572569 1.0000 100 chrXVI:581826-582317 1.0000 100 chrXVI:622328-622844 1.0000 100 chrXVI:653813-655025 1.0000 100 chrXVI:689351-689876 1.0000 100 chrXVI:699899-700700 1.0000 100 chrXVI:701869-702348 1.0000 100 chrXVI:718433-719481 1.0000 100 chrXVI:731657-732314 1.0000 100 chrXVI:743999-744677 1.0000 100 chrXVI:768623-768820 1.0000 100 chrXVI:769026-769502 1.0000 100 chrXVI:775652-776202 1.0000 100 chrXVI:794451-796084 1.0000 100 chrXVI:810472-810863 1.0000 100 chrXVI:819326-819900 1.0000 100 chrXVI:821663-822107 1.0000 100 chrXVI:856744-857098 1.0000 100 chrXVI:860125-860655 1.0000 100 chrXVI:880041-880588 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--RIM101/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--RIM101/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--RIM101/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 590 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 59000 N= 590 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.299 C 0.201 G 0.201 T 0.299 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--RIM101/background): A 0.314 C 0.186 G 0.186 T 0.314 ******************************************************************************** ******************************************************************************** MOTIF CMBSGGTTCGATYCC MEME-1 width = 15 sites = 135 llr = 1886 E-value = 2.5e-333 ******************************************************************************** -------------------------------------------------------------------------------- Motif CMBSGGTTCGATYCC MEME-1 Description -------------------------------------------------------------------------------- Simplified A :3112::::3a2::: pos.-specific C 8544::::a::24a7 probability G :2357a:::7:2::: matrix T 2:31::aa:::56:3 bits 2.4 * * * 2.2 * * * 1.9 * * * 1.7 * **** * * Relative 1.5 * ****** * Entropy 1.2 * ******* * (20.2 bits) 1.0 * ******* *** 0.7 * ******** *** 0.5 *********** *** 0.2 *********** *** 0.0 --------------- Multilevel CCCGGGTTCGATTCC consensus AGCA A AC T sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMBSGGTTCGATYCC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chrXV:594013-594683 - 67 2.41e-10 AAGCATGAGG CCCGGGTTCGATTCC CGGCTTGCGC chrXVI:860125-860655 + 84 5.71e-10 ATCGTTGGGC CCCCGGTTCGATTCC GG chrX:531523-532217 + 53 5.71e-10 ATCGTTGGGC CCCCGGTTCGATTCC GGGCTTGCGC chrX:396537-397004 - 17 5.71e-10 ATCGTTGGGC CCCCGGTTCGATTCC GGGCTTGCGC chrVII:930744-931214 - 35 5.71e-10 ATCGTTGGGC CCCCGGTTCGATTCC GGGCTTGCGC chrVI:180660-181261 - 75 5.71e-10 ATCGTTGGGC CCCCGGTTCGATTCC GGGCTTGCGC chrIV:992614-993186 + 27 5.71e-10 ATCGTTGGGC CCCCGGTTCGATTCC GGGCTTGCGC chrIV:83313-83817 + 78 5.71e-10 ATCGTTGGGC CCCCGGTTCGATTCC GGGCTTGC chrIII:123375-123819 - 41 1.10e-09 TGCGGGAGGT CCCGGGTTCGAGTCC CGGCTCGCCC chrVII:541629-542188 + 38 3.45e-09 ACCGTGGAGA CCGGGGTTCGACTCC CCGTATCGGA chrV:487085-487648 - 26 3.45e-09 ACCGTGGAGA CCGGGGTTCGACTCC CCGTATCGGA chrV:250101-250526 + 69 3.45e-09 ATCCGGACAA CCCCGGTTCGAATCC GGGTAGGACC chrV:176862-177467 + 31 3.45e-09 ACCGTGGAGA CCGGGGTTCGACTCC CCGTATCGGA chrV:130836-131415 - 18 3.45e-09 ATCCGAACAA CCCCGGTTCGAATCC GGGTAAGACC chrIX:197355-197997 + 12 3.45e-09 ACCGTGGAGA CCGGGGTTCGACTCC CCGCTTCGGA chrIV:1016962-1017517 - 29 3.45e-09 ACCGTGGAGA CCGGGGTTCGACTCC CCGCTTCGGA chrIV:802536-803010 - 19 3.45e-09 ATCCGGACAA CCCCGGTTCGAATCC GGGTAGGACC chrIV:644977-645399 - 26 3.45e-09 ATCCGGACAA CCCCGGTTCGAATCC GGGTAGGACC chrIV:520698-521386 + 26 3.45e-09 ATCCGGACAA CCCCGGTTCGAATCC GGGTAGGACC chrIII:168082-168618 - 12 3.45e-09 ATCCGGACAA CCCCGGTTCGAATCC GGGTAGGACC chrII:644951-645420 + 78 3.45e-09 ACCGTGGAGA CCGGGGTTCGACTCC CCGTATCG chrII:350567-351141 + 69 3.45e-09 ATCCGGACAA CCCCGGTTCGAATCC GGGTAAGACC chrXVI:880041-880588 - 43 9.08e-09 ACGCGGGGAT CAGCGGTTCGATCCC GCTAGAGACC chrXVI:819326-819900 + 14 9.08e-09 ACGCGGGGAT CAGCGGTTCGATCCC GCTAGAGACC chrXIV:569637-570167 - 26 9.08e-09 ACGCGGGGAT CAGCGGTTCGATCCC GCTAGAGACC chrXII:734698-735006 + 48 9.08e-09 ACGCGGGGAT CAGCGGTTCGATCCC GCTAGAGACC chrV:551034-551587 - 36 9.08e-09 ACGCGGGGAT CAGCGGTTCGATCCC GCTAGAGACC chrV:443016-443477 - 17 9.08e-09 ACGCGGGGAT CAGCGGTTCGATCCC GCTAGAGACC chrIX:210511-210970 + 23 9.08e-09 ACGCGGGGAT CAGCGGTTCGATCCC GCTAGAGACC chrIV:667759-668255 - 61 9.08e-09 ACGCGGGGAT CAGCGGTTCGATCCC GCTAGAGACC chrII:197208-197886 + 45 9.08e-09 ACGCGGGGAT CAGCGGTTCGATCCC GCTAGAGACC chrXVI:769026-769502 - 4 1.22e-08 ACCGAAATGT CAGGGGTTCGAGCCC CCT chrXV:438444-439038 + 22 1.22e-08 ACCGAAATGT CAGGGGTTCGAGCCC CCTATGAGGA chrXII:875190-875657 + 73 1.22e-08 ACCGAAATGT CAGGGGTTCGAGCCC CCTATGAGGA chrXI:578744-579397 + 15 1.22e-08 ACCGAAATGT CAGGGGTTCGAGCCC CCTATGAGGA chrXV:854019-854435 - 21 2.30e-08 AGGAAGAGGT CATCGGTTCGATTCC GGTTGCGTCC chrXII:214651-215161 - 38 2.30e-08 AGGAAGAGGT CATCGGTTCGATTCC GGTTGCGTCC chrV:311761-312294 - 57 2.30e-08 AGGAAGAGGT CATCGGTTCGATTCC GGTTGCGTCC chrI:166051-166586 + 46 2.30e-08 AGGAAGAGGT CATCGGTTCGATTCC GGTTGCGTCC chrVII:779391-779935 + 49 3.26e-08 AAGGTGGGGA CACGGGTTCGATTCT CGTACCGCTC chrXV:980480-981050 + 47 3.80e-08 TGCGAGAGGC CCTGGGTTCAATTCC CAGCTCGCCC chrXV:464241-464781 + 65 3.80e-08 TGCGAGAGGC CCTGGGTTCAATTCC CAGCTCGCCC chrXV:300861-301470 + 58 3.80e-08 TGCGAGAGGC CCTGGGTTCAATTCC CAGCTCGCCC chrXIV:546937-547394 + 56 3.80e-08 TGCGAGAGGC CCTGGGTTCAATTCC CAGCTCGCCC chrXII:92249-92945 + 78 3.80e-08 TGCGAGAGGC CCTGGGTTCAATTCC CAGCTCGC chrVIII:388645-389212 - 26 3.80e-08 TGCGAGAGGC CCTGGGTTCAATTCC CAGCTCGCCC chrVII:700215-701263 + 42 6.58e-08 TCTTCGGAGG CGCGGGTTCAAACCC CGCGGGTATC chrVIII:475501-475912 - 61 7.52e-08 CGGCAAAGGT CCCGAGTTCGATCCT CGGTTGGAAC chrIV:1075292-1075756 - 9 7.52e-08 CGGCAAAGGT CCCGAGTTCGATCCT CGGTTGGA chrXVI:856744-857098 + 78 8.48e-08 TGGGAGAGGT CTCCGGTTCGATTCC GGACTCGT chrXIII:768163-768638 - 30 8.48e-08 TGGGAGAGGT CTCCGGTTCGATTCC GGACTCGTCC chrXIII:320956-321335 - 63 8.48e-08 TGGGAGAGGT CTCCGGTTCGATTCC GGACTCGTCC chrXII:656701-657212 - 39 8.48e-08 TGGGAGAGGT CTCCGGTTCGATTCC GGACTCGTCC chrVII:774114-774619 + 80 8.48e-08 TGGGAGAGGT CTCCGGTTCGATTCC GGACTC chrIV:410163-410716 + 37 8.48e-08 TGGGAGAGGT CTCCGGTTCGATTCC GGACTCGTCC chrXV:663480-664261 - 3 1.13e-07 CGCAGAACGT CCCCAGTTCGATCCT GG chrXIII:586393-586918 - 42 1.13e-07 CGCAGAACGT CCCCAGTTCGATCCT GGGCGAAATC chrXIII:420316-420865 - 59 1.13e-07 CGCAGAACGT CCCCAGTTCGATCCT GGGCGAAATC chrXIII:372172-372730 - 55 1.13e-07 CGCAGAACGT CCCCAGTTCGATCCT GGGCGAAATC chrXII:687658-688143 - 20 1.13e-07 CGCAGAACGT CCCCAGTTCGATCCT GGGCGAAATC chrXI:307965-308429 - 8 1.13e-07 CGCAGAACGT CCCCAGTTCGATCCT GGGCGAA chrVIII:85026-85582 - 55 1.13e-07 CGCAGAACGT CCCCAGTTCGATCCT GGGCGAAATC chrVII:412112-412589 - 5 1.13e-07 CGCAGAACGT CCCCAGTTCGATCCT GGGC chrXII:167720-168284 - 3 1.40e-07 GCTTTGCCCG CGCAGGTTCGAGTCC TG chrVIII:132787-133353 - 17 1.40e-07 GCTTTGCCCG CGCAGGTTCGAGTCC TGCAGTTGTC chrIV:1305377-1306057 + 20 1.40e-07 CTTTGGCCCG CGCAGGTTCGAGTCC TGCAGTTGTC chrIV:980757-981263 - 25 1.40e-07 GCTTTGCCCG CGCAGGTTCGAGTCC TGCAGTTGTC chrIV:437538-438076 + 71 1.40e-07 GCTTTGCCCG CGCAGGTTCGAGTCC TGCAGTTGTC chrI:182347-182787 - 16 1.40e-07 GCTTTGCCCG CGCAGGTTCGAGTCC TGCAGTTGTC chrXV:274464-275003 + 65 1.56e-07 GTTTTACCTG CGCAGGTTCGAATCC TGTCTGTGAC chrXIII:480368-480908 - 44 1.56e-07 ATCATAAGGT TAGGGGTTCGAGCCC CCTACAGGGC chrXI:202820-203300 + 36 1.56e-07 ATCATAAGGT TAGGGGTTCGAGCCC CCTACAGGGC chrX:414792-415265 + 35 1.56e-07 ATCATAAGGT TAGGGGTTCGAGCCC CCTACAGGGC chrVII:121978-122643 + 56 1.56e-07 ATCATAAGGT TAGGGGTTCGAGCCC CCTACAGGGC chrV:135170-135690 - 56 1.56e-07 ATCATAAGGT TAGGGGTTCGAGCCC CCTACAGGGC chrIV:1201518-1202113 + 32 1.56e-07 ATCATAAGGT TAGGGGTTCGAGCCC CCTACAGGGC chrIV:488433-489162 - 61 1.56e-07 CGGCGAAGAT CCCGAGTTCGAACCT CGGTTGGATC chrII:326528-327098 - 40 1.56e-07 CGGCGAAGAT CCCGAGTTCGAACCT CGGTTGGATC chrXIII:463310-463889 + 51 1.98e-07 GCGTGCCAGA TCGGGGTTCAATTCC CCGTCGCGGA chrXII:426874-427466 + 58 1.98e-07 GCGTGCCAGA TCGGGGTTCAATTCC CCGTCGCGGA chrX:617758-618172 + 79 1.98e-07 TCTTCGGATG CAAGGGTTCGAATCC CTTAGCT chrX:541330-541808 + 35 1.98e-07 GCGTGCCAGA TCGGGGTTCAATTCC CCGTCGCGGA chrX:204498-205005 + 80 1.98e-07 GCGTGCCAGA TCGGGGTTCAATTCC CCGTCG chrVII:531434-531809 + 85 1.98e-07 GCGTGCCAGA TCGGGGTTCAATTCC C chrIX:336120-336654 - 23 1.98e-07 GCGTGCCAGA TCGGGGTTCAATTCC CCGTCGCGGA chrIV:568675-569335 + 55 1.98e-07 GCGTGCCAGA TCGGGGTTCAATTCC CCGTCGCGGA chrXIII:362851-363306 + 82 2.23e-07 GCCGATGAAA CCCTGGTTCGATTCT AGGA chrVII:319586-320155 + 7 2.23e-07 ATGAAA CCCTGGTTCGATTCT AGGAGATGGC chrVII:110397-110929 - 23 2.23e-07 GCCGATGAAA CCCTGGTTCGATTCT AGGAGATGGC chrV:434376-434784 - 22 2.23e-07 GCCGATGAAA CCCTGGTTCGATTCT AGGAGATGGC chrX:374193-374833 - 54 2.67e-07 ATCAGAAGAT TATGGGTTCGACCCC CATCGTGAGT chrX:355130-355744 + 33 2.67e-07 ATCAGAAGAT TATGGGTTCGACCCC CATCGTGAGT chrVII:828435-828982 - 76 2.67e-07 ATCAGAAGAT TATGGGTTCGACCCC CATCGTGAGT chrVII:736170-736546 + 78 2.67e-07 ATCAGAAGAT TATGGGTTCGACCCC CATCGTGA chrVII:405269-405774 + 45 2.67e-07 ATCAGAAGAT TATGGGTTCGACCCC CATCGTGAGT chrII:405615-406251 + 41 2.67e-07 ATCAGAAGAT TATGGGTTCGACCCC CATCGTGAGT chrXV:353863-354318 - 12 3.01e-07 ATGTGGAGAT CATCGGTTCAAATCC GATTGGAAGC chrXV:113508-114186 + 52 3.01e-07 ATGTGGAGAT CATCGGTTCAAATCC GATTGGAAGC chrXIV:104580-105156 + 34 3.01e-07 ATGTGGAGAT CATCGGTTCAAATCC GATTGGAAGC chrIX:325501-326141 + 24 3.01e-07 ATGTGGAGAT CATCGGTTCAAATCC GATTGGAAGC chrIX:174829-175261 + 83 3.01e-07 ATGTGGAGAT CATCGGTTCAAATCC GAT chrIV:434013-434554 - 42 3.01e-07 ATGTGGAGAT CATCGGTTCAAATCC GATTGGAAGC chrII:266151-266729 + 35 3.01e-07 ATGTGGAGAT CATCGGTTCAAATCC GATTGGAAGC chrII:347404-347929 + 45 3.67e-07 CGGTTGTCCG CGCGAGTTCGAACCT CGCATCCTTC chrII:9363-9967 + 26 3.67e-07 CGGTTGTCCG CGCGAGTTCGAACCT CGCATCCTTC chrXVI:689351-689876 + 58 8.61e-07 GCTCTGCCCG CGCTGGTTCAAATCC TGCTGGTGTC chrV:288173-288751 - 42 8.61e-07 GCTCTGCCCG CGCTGGTTCAAATCC TGCTGGTGTC chrXII:374203-374650 + 26 1.36e-06 ACCAGAAGAT TCCAGGTTCAAGTCC TGGCGGGGAA chrXI:490742-491385 + 2 1.36e-06 T TCCAGGTTCAAGTCC TGGCGGGGAA chrV:492200-492579 - 24 1.36e-06 ACCAGAAGAT TCCAGGTTCAAGTCC TGGCGGGGAA chrIV:619679-620248 - 67 1.36e-06 ACCAGAAGAT TCCAGGTTCAAGTCC TGGCGGGGAA chrXVI:435614-436201 - 47 1.70e-06 ATCTGTTGGT CCTTAGTTCGATCCT GAGTGCGAGC chrXVI:55848-56503 - 55 1.70e-06 ATCGAAGGGT TGCAGGTTCAATTCC TGTCCGTTTC chrVII:706920-707350 - 34 1.70e-06 ATCTGTTGGT CCTTAGTTCGATCCT GAGTGCGAGC chrXV:976194-976737 + 53 2.27e-06 ATCTGAAGGT CGAGAGTTCGAACCT CCCCTGGAGC chrXV:487240-487735 + 50 2.27e-06 ATCGCAAGAT CGTGAGTTCAACCCT CACTGGGGTC chrXV:228085-228633 + 70 2.27e-06 ATCGCAAGAT CGTGAGTTCAACCCT CACTGGGGTC chrXIV:632396-632892 + 53 2.27e-06 ATCGCAAGAT CGTGAGTTCAACCCT CACTGGGGTC chrXII:975757-976255 - 38 2.27e-06 ATCGCAAGAT CGTGAGTTCAACCCT CACTGGGGTC chrX:422688-423370 + 5 2.27e-06 AGGT CGAGAGTTCGAACCT CCCCTGGAGC chrX:390841-391317 - 25 2.27e-06 ATCTGAAGGT CGAGAGTTCGAACCT CCCCTGGAGC chrVII:730948-731437 + 43 2.27e-06 ATCGCAAGAT CGTGAGTTCAACCCT CACTGGGGTC chrVII:422874-423492 + 47 2.42e-06 TCGTAAGATG CAAGAGTTCGAATCT CTTAGCAACC chrVII:205296-205915 + 54 2.42e-06 TCGTAAGATG CAAGAGTTCGAATCT CTTAGCAACC chrIV:1461481-1462061 - 5 2.42e-06 TCGTAAGATG CAAGAGTTCGAATCT CTTA chrI:180923-181474 + 81 2.42e-06 TCGTAAGATG CAAGAGTTCGAATCT CTTAG chrXV:288033-288407 + 85 3.93e-06 ATCTTGAGAT CGGGCGTTCGACTCG C chrXIII:837715-838284 + 42 3.93e-06 ATCTTGAGAT CGGGCGTTCGACTCG CCCCCGGGAG chrVI:167244-167688 + 84 3.93e-06 ATCTTGAGAT CGGGCGTTCGACTCG CC chrIV:946134-946629 + 44 3.93e-06 ATCTTGAGAT CGGGCGTTCGACTCG CCCCCGGGAG chrXVI:622328-622844 - 15 4.14e-06 ATCTGGAGGT CCTGTGTTCGATCCA CAGAATTCGC chrXVI:559987-560506 - 13 4.14e-06 ATCTGGAGGT CCTGTGTTCGATCCA CAGAATTCGC chrVIII:358245-358797 - 18 4.14e-06 ATCTGGAGGT CCTGTGTTCGATCCA CAGAATTCGC chrIV:1095025-1095675 - 81 4.14e-06 GAGGT CCTGTGTTCGATCCA CAGAGTTCGC chrXVI:743999-744677 + 42 6.54e-06 ATGCAAAGGT CGTTAGTTCAATTCT GACAGGTGGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMBSGGTTCGATYCC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXV:594013-594683 2.4e-10 66_[-1]_19 chrXVI:860125-860655 5.7e-10 83_[+1]_2 chrX:531523-532217 5.7e-10 52_[+1]_33 chrX:396537-397004 5.7e-10 16_[-1]_69 chrVII:930744-931214 5.7e-10 34_[-1]_51 chrVI:180660-181261 5.7e-10 74_[-1]_11 chrIV:992614-993186 5.7e-10 26_[+1]_59 chrIV:83313-83817 5.7e-10 77_[+1]_8 chrIII:123375-123819 1.1e-09 40_[-1]_45 chrVII:541629-542188 3.4e-09 37_[+1]_48 chrV:487085-487648 3.4e-09 25_[-1]_60 chrV:250101-250526 3.4e-09 68_[+1]_17 chrV:176862-177467 3.4e-09 30_[+1]_55 chrV:130836-131415 3.4e-09 17_[-1]_68 chrIX:197355-197997 3.4e-09 11_[+1]_74 chrIV:1016962-1017517 3.4e-09 28_[-1]_57 chrIV:802536-803010 3.4e-09 18_[-1]_67 chrIV:644977-645399 3.4e-09 25_[-1]_60 chrIV:520698-521386 3.4e-09 25_[+1]_60 chrIII:168082-168618 3.4e-09 11_[-1]_74 chrII:644951-645420 3.4e-09 77_[+1]_8 chrII:350567-351141 3.4e-09 68_[+1]_17 chrXVI:880041-880588 9.1e-09 42_[-1]_43 chrXVI:819326-819900 9.1e-09 13_[+1]_72 chrXIV:569637-570167 9.1e-09 25_[-1]_60 chrXII:734698-735006 9.1e-09 47_[+1]_38 chrV:551034-551587 9.1e-09 35_[-1]_50 chrV:443016-443477 9.1e-09 16_[-1]_69 chrIX:210511-210970 9.1e-09 22_[+1]_63 chrIV:667759-668255 9.1e-09 60_[-1]_25 chrII:197208-197886 9.1e-09 44_[+1]_41 chrXVI:769026-769502 1.2e-08 3_[-1]_82 chrXV:438444-439038 1.2e-08 21_[+1]_64 chrXII:875190-875657 1.2e-08 72_[+1]_13 chrXI:578744-579397 1.2e-08 14_[+1]_71 chrXV:854019-854435 2.3e-08 20_[-1]_65 chrXII:214651-215161 2.3e-08 37_[-1]_48 chrV:311761-312294 2.3e-08 56_[-1]_29 chrI:166051-166586 2.3e-08 45_[+1]_40 chrVII:779391-779935 3.3e-08 48_[+1]_37 chrXV:980480-981050 3.8e-08 46_[+1]_39 chrXV:464241-464781 3.8e-08 64_[+1]_21 chrXV:300861-301470 3.8e-08 57_[+1]_28 chrXIV:546937-547394 3.8e-08 55_[+1]_30 chrXII:92249-92945 3.8e-08 77_[+1]_8 chrVIII:388645-389212 3.8e-08 25_[-1]_60 chrVII:700215-701263 6.6e-08 41_[+1]_44 chrVIII:475501-475912 7.5e-08 60_[-1]_25 chrIV:1075292-1075756 7.5e-08 8_[-1]_77 chrXVI:856744-857098 8.5e-08 77_[+1]_8 chrXIII:768163-768638 8.5e-08 29_[-1]_56 chrXIII:320956-321335 8.5e-08 62_[-1]_23 chrXII:656701-657212 8.5e-08 38_[-1]_47 chrVII:774114-774619 8.5e-08 79_[+1]_6 chrIV:410163-410716 8.5e-08 36_[+1]_49 chrXV:663480-664261 1.1e-07 2_[-1]_83 chrXIII:586393-586918 1.1e-07 41_[-1]_44 chrXIII:420316-420865 1.1e-07 58_[-1]_27 chrXIII:372172-372730 1.1e-07 54_[-1]_31 chrXII:687658-688143 1.1e-07 19_[-1]_66 chrXI:307965-308429 1.1e-07 7_[-1]_78 chrVIII:85026-85582 1.1e-07 54_[-1]_31 chrVII:412112-412589 1.1e-07 4_[-1]_81 chrXII:167720-168284 1.4e-07 2_[-1]_83 chrVIII:132787-133353 1.4e-07 16_[-1]_69 chrIV:1305377-1306057 1.4e-07 19_[+1]_66 chrIV:980757-981263 1.4e-07 24_[-1]_61 chrIV:437538-438076 1.4e-07 70_[+1]_15 chrI:182347-182787 1.4e-07 15_[-1]_70 chrXV:274464-275003 1.6e-07 64_[+1]_21 chrXIII:480368-480908 1.6e-07 43_[-1]_42 chrXI:202820-203300 1.6e-07 35_[+1]_50 chrX:414792-415265 1.6e-07 34_[+1]_51 chrVII:121978-122643 1.6e-07 55_[+1]_30 chrV:135170-135690 1.6e-07 55_[-1]_30 chrIV:1201518-1202113 1.6e-07 31_[+1]_54 chrIV:488433-489162 1.6e-07 60_[-1]_25 chrII:326528-327098 1.6e-07 39_[-1]_46 chrXIII:463310-463889 2e-07 50_[+1]_35 chrXII:426874-427466 2e-07 57_[+1]_28 chrX:617758-618172 2e-07 78_[+1]_7 chrX:541330-541808 2e-07 34_[+1]_51 chrX:204498-205005 2e-07 79_[+1]_6 chrVII:531434-531809 2e-07 84_[+1]_1 chrIX:336120-336654 2e-07 22_[-1]_63 chrIV:568675-569335 2e-07 54_[+1]_31 chrXIII:362851-363306 2.2e-07 81_[+1]_4 chrVII:319586-320155 2.2e-07 6_[+1]_79 chrVII:110397-110929 2.2e-07 22_[-1]_63 chrV:434376-434784 2.2e-07 21_[-1]_64 chrX:374193-374833 2.7e-07 53_[-1]_32 chrX:355130-355744 2.7e-07 32_[+1]_53 chrVII:828435-828982 2.7e-07 75_[-1]_10 chrVII:736170-736546 2.7e-07 77_[+1]_8 chrVII:405269-405774 2.7e-07 44_[+1]_41 chrII:405615-406251 2.7e-07 40_[+1]_45 chrXV:353863-354318 3e-07 11_[-1]_74 chrXV:113508-114186 3e-07 51_[+1]_34 chrXIV:104580-105156 3e-07 33_[+1]_52 chrIX:325501-326141 3e-07 23_[+1]_62 chrIX:174829-175261 3e-07 82_[+1]_3 chrIV:434013-434554 3e-07 41_[-1]_44 chrII:266151-266729 3e-07 34_[+1]_51 chrII:347404-347929 3.7e-07 44_[+1]_41 chrII:9363-9967 3.7e-07 25_[+1]_60 chrXVI:689351-689876 8.6e-07 57_[+1]_28 chrV:288173-288751 8.6e-07 41_[-1]_44 chrXII:374203-374650 1.4e-06 25_[+1]_60 chrXI:490742-491385 1.4e-06 1_[+1]_84 chrV:492200-492579 1.4e-06 23_[-1]_62 chrIV:619679-620248 1.4e-06 66_[-1]_19 chrXVI:435614-436201 1.7e-06 46_[-1]_39 chrXVI:55848-56503 1.7e-06 54_[-1]_31 chrVII:706920-707350 1.7e-06 33_[-1]_52 chrXV:976194-976737 2.3e-06 52_[+1]_33 chrXV:487240-487735 2.3e-06 49_[+1]_36 chrXV:228085-228633 2.3e-06 69_[+1]_16 chrXIV:632396-632892 2.3e-06 52_[+1]_33 chrXII:975757-976255 2.3e-06 37_[-1]_48 chrX:422688-423370 2.3e-06 4_[+1]_81 chrX:390841-391317 2.3e-06 24_[-1]_61 chrVII:730948-731437 2.3e-06 42_[+1]_43 chrVII:422874-423492 2.4e-06 46_[+1]_39 chrVII:205296-205915 2.4e-06 53_[+1]_32 chrIV:1461481-1462061 2.4e-06 4_[-1]_81 chrI:180923-181474 2.4e-06 80_[+1]_5 chrXV:288033-288407 3.9e-06 84_[+1]_1 chrXIII:837715-838284 3.9e-06 41_[+1]_44 chrVI:167244-167688 3.9e-06 83_[+1]_2 chrIV:946134-946629 3.9e-06 43_[+1]_42 chrXVI:622328-622844 4.1e-06 14_[-1]_71 chrXVI:559987-560506 4.1e-06 12_[-1]_73 chrVIII:358245-358797 4.1e-06 17_[-1]_68 chrIV:1095025-1095675 4.1e-06 80_[-1]_5 chrXVI:743999-744677 6.5e-06 41_[+1]_44 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMBSGGTTCGATYCC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CMBSGGTTCGATYCC width=15 seqs=135 chrXV:594013-594683 ( 67) CCCGGGTTCGATTCC 1 chrXVI:860125-860655 ( 84) CCCCGGTTCGATTCC 1 chrX:531523-532217 ( 53) CCCCGGTTCGATTCC 1 chrX:396537-397004 ( 17) CCCCGGTTCGATTCC 1 chrVII:930744-931214 ( 35) CCCCGGTTCGATTCC 1 chrVI:180660-181261 ( 75) CCCCGGTTCGATTCC 1 chrIV:992614-993186 ( 27) CCCCGGTTCGATTCC 1 chrIV:83313-83817 ( 78) CCCCGGTTCGATTCC 1 chrIII:123375-123819 ( 41) CCCGGGTTCGAGTCC 1 chrVII:541629-542188 ( 38) CCGGGGTTCGACTCC 1 chrV:487085-487648 ( 26) CCGGGGTTCGACTCC 1 chrV:250101-250526 ( 69) CCCCGGTTCGAATCC 1 chrV:176862-177467 ( 31) CCGGGGTTCGACTCC 1 chrV:130836-131415 ( 18) CCCCGGTTCGAATCC 1 chrIX:197355-197997 ( 12) CCGGGGTTCGACTCC 1 chrIV:1016962-1017517 ( 29) CCGGGGTTCGACTCC 1 chrIV:802536-803010 ( 19) CCCCGGTTCGAATCC 1 chrIV:644977-645399 ( 26) CCCCGGTTCGAATCC 1 chrIV:520698-521386 ( 26) CCCCGGTTCGAATCC 1 chrIII:168082-168618 ( 12) CCCCGGTTCGAATCC 1 chrII:644951-645420 ( 78) CCGGGGTTCGACTCC 1 chrII:350567-351141 ( 69) CCCCGGTTCGAATCC 1 chrXVI:880041-880588 ( 43) CAGCGGTTCGATCCC 1 chrXVI:819326-819900 ( 14) CAGCGGTTCGATCCC 1 chrXIV:569637-570167 ( 26) CAGCGGTTCGATCCC 1 chrXII:734698-735006 ( 48) CAGCGGTTCGATCCC 1 chrV:551034-551587 ( 36) CAGCGGTTCGATCCC 1 chrV:443016-443477 ( 17) CAGCGGTTCGATCCC 1 chrIX:210511-210970 ( 23) CAGCGGTTCGATCCC 1 chrIV:667759-668255 ( 61) CAGCGGTTCGATCCC 1 chrII:197208-197886 ( 45) CAGCGGTTCGATCCC 1 chrXVI:769026-769502 ( 4) CAGGGGTTCGAGCCC 1 chrXV:438444-439038 ( 22) CAGGGGTTCGAGCCC 1 chrXII:875190-875657 ( 73) CAGGGGTTCGAGCCC 1 chrXI:578744-579397 ( 15) CAGGGGTTCGAGCCC 1 chrXV:854019-854435 ( 21) CATCGGTTCGATTCC 1 chrXII:214651-215161 ( 38) CATCGGTTCGATTCC 1 chrV:311761-312294 ( 57) CATCGGTTCGATTCC 1 chrI:166051-166586 ( 46) CATCGGTTCGATTCC 1 chrVII:779391-779935 ( 49) CACGGGTTCGATTCT 1 chrXV:980480-981050 ( 47) CCTGGGTTCAATTCC 1 chrXV:464241-464781 ( 65) CCTGGGTTCAATTCC 1 chrXV:300861-301470 ( 58) CCTGGGTTCAATTCC 1 chrXIV:546937-547394 ( 56) CCTGGGTTCAATTCC 1 chrXII:92249-92945 ( 78) CCTGGGTTCAATTCC 1 chrVIII:388645-389212 ( 26) CCTGGGTTCAATTCC 1 chrVII:700215-701263 ( 42) CGCGGGTTCAAACCC 1 chrVIII:475501-475912 ( 61) CCCGAGTTCGATCCT 1 chrIV:1075292-1075756 ( 9) CCCGAGTTCGATCCT 1 chrXVI:856744-857098 ( 78) CTCCGGTTCGATTCC 1 chrXIII:768163-768638 ( 30) CTCCGGTTCGATTCC 1 chrXIII:320956-321335 ( 63) CTCCGGTTCGATTCC 1 chrXII:656701-657212 ( 39) CTCCGGTTCGATTCC 1 chrVII:774114-774619 ( 80) CTCCGGTTCGATTCC 1 chrIV:410163-410716 ( 37) CTCCGGTTCGATTCC 1 chrXV:663480-664261 ( 3) CCCCAGTTCGATCCT 1 chrXIII:586393-586918 ( 42) CCCCAGTTCGATCCT 1 chrXIII:420316-420865 ( 59) CCCCAGTTCGATCCT 1 chrXIII:372172-372730 ( 55) CCCCAGTTCGATCCT 1 chrXII:687658-688143 ( 20) CCCCAGTTCGATCCT 1 chrXI:307965-308429 ( 8) CCCCAGTTCGATCCT 1 chrVIII:85026-85582 ( 55) CCCCAGTTCGATCCT 1 chrVII:412112-412589 ( 5) CCCCAGTTCGATCCT 1 chrXII:167720-168284 ( 3) CGCAGGTTCGAGTCC 1 chrVIII:132787-133353 ( 17) CGCAGGTTCGAGTCC 1 chrIV:1305377-1306057 ( 20) CGCAGGTTCGAGTCC 1 chrIV:980757-981263 ( 25) CGCAGGTTCGAGTCC 1 chrIV:437538-438076 ( 71) CGCAGGTTCGAGTCC 1 chrI:182347-182787 ( 16) CGCAGGTTCGAGTCC 1 chrXV:274464-275003 ( 65) CGCAGGTTCGAATCC 1 chrXIII:480368-480908 ( 44) TAGGGGTTCGAGCCC 1 chrXI:202820-203300 ( 36) TAGGGGTTCGAGCCC 1 chrX:414792-415265 ( 35) TAGGGGTTCGAGCCC 1 chrVII:121978-122643 ( 56) TAGGGGTTCGAGCCC 1 chrV:135170-135690 ( 56) TAGGGGTTCGAGCCC 1 chrIV:1201518-1202113 ( 32) TAGGGGTTCGAGCCC 1 chrIV:488433-489162 ( 61) CCCGAGTTCGAACCT 1 chrII:326528-327098 ( 40) CCCGAGTTCGAACCT 1 chrXIII:463310-463889 ( 51) TCGGGGTTCAATTCC 1 chrXII:426874-427466 ( 58) TCGGGGTTCAATTCC 1 chrX:617758-618172 ( 79) CAAGGGTTCGAATCC 1 chrX:541330-541808 ( 35) TCGGGGTTCAATTCC 1 chrX:204498-205005 ( 80) TCGGGGTTCAATTCC 1 chrVII:531434-531809 ( 85) TCGGGGTTCAATTCC 1 chrIX:336120-336654 ( 23) TCGGGGTTCAATTCC 1 chrIV:568675-569335 ( 55) TCGGGGTTCAATTCC 1 chrXIII:362851-363306 ( 82) CCCTGGTTCGATTCT 1 chrVII:319586-320155 ( 7) CCCTGGTTCGATTCT 1 chrVII:110397-110929 ( 23) CCCTGGTTCGATTCT 1 chrV:434376-434784 ( 22) CCCTGGTTCGATTCT 1 chrX:374193-374833 ( 54) TATGGGTTCGACCCC 1 chrX:355130-355744 ( 33) TATGGGTTCGACCCC 1 chrVII:828435-828982 ( 76) TATGGGTTCGACCCC 1 chrVII:736170-736546 ( 78) TATGGGTTCGACCCC 1 chrVII:405269-405774 ( 45) TATGGGTTCGACCCC 1 chrII:405615-406251 ( 41) TATGGGTTCGACCCC 1 chrXV:353863-354318 ( 12) CATCGGTTCAAATCC 1 chrXV:113508-114186 ( 52) CATCGGTTCAAATCC 1 chrXIV:104580-105156 ( 34) CATCGGTTCAAATCC 1 chrIX:325501-326141 ( 24) CATCGGTTCAAATCC 1 chrIX:174829-175261 ( 83) CATCGGTTCAAATCC 1 chrIV:434013-434554 ( 42) CATCGGTTCAAATCC 1 chrII:266151-266729 ( 35) CATCGGTTCAAATCC 1 chrII:347404-347929 ( 45) CGCGAGTTCGAACCT 1 chrII:9363-9967 ( 26) CGCGAGTTCGAACCT 1 chrXVI:689351-689876 ( 58) CGCTGGTTCAAATCC 1 chrV:288173-288751 ( 42) CGCTGGTTCAAATCC 1 chrXII:374203-374650 ( 26) TCCAGGTTCAAGTCC 1 chrXI:490742-491385 ( 2) TCCAGGTTCAAGTCC 1 chrV:492200-492579 ( 24) TCCAGGTTCAAGTCC 1 chrIV:619679-620248 ( 67) TCCAGGTTCAAGTCC 1 chrXVI:435614-436201 ( 47) CCTTAGTTCGATCCT 1 chrXVI:55848-56503 ( 55) TGCAGGTTCAATTCC 1 chrVII:706920-707350 ( 34) CCTTAGTTCGATCCT 1 chrXV:976194-976737 ( 53) CGAGAGTTCGAACCT 1 chrXV:487240-487735 ( 50) CGTGAGTTCAACCCT 1 chrXV:228085-228633 ( 70) CGTGAGTTCAACCCT 1 chrXIV:632396-632892 ( 53) CGTGAGTTCAACCCT 1 chrXII:975757-976255 ( 38) CGTGAGTTCAACCCT 1 chrX:422688-423370 ( 5) CGAGAGTTCGAACCT 1 chrX:390841-391317 ( 25) CGAGAGTTCGAACCT 1 chrVII:730948-731437 ( 43) CGTGAGTTCAACCCT 1 chrVII:422874-423492 ( 47) CAAGAGTTCGAATCT 1 chrVII:205296-205915 ( 54) CAAGAGTTCGAATCT 1 chrIV:1461481-1462061 ( 5) CAAGAGTTCGAATCT 1 chrI:180923-181474 ( 81) CAAGAGTTCGAATCT 1 chrXV:288033-288407 ( 85) CGGGCGTTCGACTCG 1 chrXIII:837715-838284 ( 42) CGGGCGTTCGACTCG 1 chrVI:167244-167688 ( 84) CGGGCGTTCGACTCG 1 chrIV:946134-946629 ( 44) CGGGCGTTCGACTCG 1 chrXVI:622328-622844 ( 15) CCTGTGTTCGATCCA 1 chrXVI:559987-560506 ( 13) CCTGTGTTCGATCCA 1 chrVIII:358245-358797 ( 18) CCTGTGTTCGATCCA 1 chrIV:1095025-1095675 ( 81) CCTGTGTTCGATCCA 1 chrXVI:743999-744677 ( 42) CGTTAGTTCAATTCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMBSGGTTCGATYCC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 50740 bayes= 9.33951 E= 2.5e-333 -1372 215 -1372 -82 -1 128 5 -282 -241 116 52 -28 -182 94 140 -224 -55 -265 197 -341 -1372 -1372 243 -1372 -1372 -1372 -1372 167 -1372 -1372 -1372 167 -1372 243 -1372 -1372 -32 -1372 201 -1372 167 -1372 -1372 -1372 -50 -26 -26 57 -1372 111 -1372 93 -1372 243 -1372 -1372 -341 189 -265 -32 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMBSGGTTCGATYCC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 135 E= 2.5e-333 0.000000 0.822222 0.000000 0.177778 0.311111 0.451852 0.192593 0.044444 0.059259 0.414815 0.266667 0.259259 0.088889 0.355556 0.488889 0.066667 0.214815 0.029630 0.725926 0.029630 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.251852 0.000000 0.748148 0.000000 1.000000 0.000000 0.000000 0.000000 0.222222 0.155556 0.155556 0.466667 0.000000 0.400000 0.000000 0.600000 0.000000 1.000000 0.000000 0.000000 0.029630 0.688889 0.029630 0.251852 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMBSGGTTCGATYCC MEME-1 regular expression -------------------------------------------------------------------------------- C[CA][CGT][GC][GA]GTTC[GA]A[TA][TC]C[CT] -------------------------------------------------------------------------------- Time 339.48 secs. ******************************************************************************** ******************************************************************************** MOTIF WGSBBNBDTRGYBYAGTGGKTARAGSS MEME-2 width = 27 sites = 119 llr = 1922 E-value = 3.0e-365 ******************************************************************************** -------------------------------------------------------------------------------- Motif WGSBBNBDTRGYBYAGTGGKTARAGSS MEME-2 Description -------------------------------------------------------------------------------- Simplified A 4:1:1213:4:::1a1::::27552:: pos.-specific C 2:44324::::643:::2::2::2154 probability G :8532223:6a:22:9:6a41:42635 matrix T 41:33334a::435::93:66311121 bits 2.4 * * 2.2 * * 1.9 * * 1.7 * * * ** * Relative 1.5 * * * *** * Entropy 1.2 * **** *** * (23.3 bits) 1.0 ** **** *** * 0.7 ** **** ****** * *** 0.5 *** ***** ****** ** *** 0.2 ***** ********************* 0.0 --------------------------- Multilevel AGGCCTCTTGGCCTAGTGGTTAAAGCG consensus T CTTCTA A TTC T G TGCAGC sequence G AGG G G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSBBNBDTRGYBYAGTGGKTARAGSS MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------------- chrX:197170-197613 - 19 4.23e-12 CAATAATATT AGGGCGTGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXIII:768163-768638 - 66 6.71e-12 ATAAGAAA TGGGCGTGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrVII:774114-774619 + 32 6.71e-12 ATCAATTAAT TGGGCGTGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXV:854019-854435 - 57 8.39e-12 AACAGTCATC AGGGCACATGGCGCAGTTGGTAGCGCG CTTCCCTTGC chrXII:214651-215161 - 74 8.39e-12 . AGGGCACATGGCGCAGTTGGTAGCGCG CTTCCCTTGC chrX:523875-524349 - 6 8.39e-12 AAGAGATTAA AGGCAACTTGGCCGAGTGGTTAAGGCG AAAGA chrIV:980757-981263 - 70 8.39e-12 ATTG AGGCAACTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrIV:437538-438076 + 14 8.39e-12 ATCATTAGTA AGGCAACTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrXVI:856744-857098 + 30 1.30e-11 CAACAAGATT CGGGCGTGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXIII:259013-259488 - 14 1.30e-11 CAAGTTAGTA TGGCAACTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrXII:167720-168284 - 48 1.30e-11 AATAGTCATA TGGCAACTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrVIII:132787-133353 - 62 1.30e-11 ATATAATAAG TGGCAACTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrVI:204783-205215 - 22 1.30e-11 AACAAACGTT CGGGCGTGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrI:182347-182787 - 61 1.30e-11 CATACAATTT TGGCAACTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrIII:227717-228210 + 28 2.94e-11 CAAATCGAAA TGGCACTATGGCCGAGTGGTTAAGGCG AGAGACTCGA chrV:551034-551587 - 73 6.31e-11 C AGGTCTCTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXIV:602093-602541 + 44 9.06e-11 CAGATAACAA TGGTCTCTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXIV:569637-570167 - 63 9.06e-11 CAGATAACAG TGGTCTCTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrV:443016-443477 - 54 9.06e-11 CATTAAAATT TGGTCTCTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXII:605152-605640 - 61 2.52e-10 CTTTCGAAAA TGCTCGTGTAGCTCAGTGGTTAGAGCT TCGTGCTTAT chrXVI:581826-582317 + 40 4.06e-10 TCAACAAAAG AGCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrXII:731910-732261 + 54 4.06e-10 CAACATACAA TGGGAGTTTGGCCGAGTGGTTTAAGGC GTCAGATTTA chrX:617758-618172 + 3 4.06e-10 AA TGGGAGTTTGGCCGAGTGGTTTAAGGC GTCAGATTTA chrVII:876033-876766 + 44 4.06e-10 ATAATAGAAT AGCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrVII:121978-122643 + 8 4.06e-10 ACGAATT AGCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrV:435627-436018 - 27 4.06e-10 CAACAATAAG AGCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrXV:113508-114186 + 4 4.73e-10 TTT AGCTTCTATGGCCAAGTTGGTAAGGCG CCACACTAGT chrVIII:115944-116432 - 16 4.73e-10 TCACTATTAG AGCTTCTATGGCCAAGTTGGTAAGGCG CCACACTAGT chrIX:174829-175261 + 35 4.73e-10 AACAAGTACG AGCTTCTATGGCCAAGTTGGTAAGGCG CCACACTAGT chrXVI:689351-689876 + 1 5.51e-10 . GGGCACTATGGCCGAGTGGTTAAGGCG ACAGACTTGA chrVI:226557-226951 - 31 5.51e-10 GAGATTAAAA TGCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrXV:353863-354318 - 48 6.41e-10 AACGGTTTAC TGCTTCTATGGCCAAGTTGGTAAGGCG CCACACTAGT chrXIV:374679-375107 + 25 1.15e-09 CAGAAAAATA AGCGGACTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXII:784169-784545 + 46 1.15e-09 GTTGTTCAAC CGTCCCAGTGGCCGAGTGGTTAAGGCG ATGCCTGCTA chrXVI:769026-769502 - 63 1.51e-09 CGAAGAACTC ATCCTTGTTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXII:875190-875657 + 2 1.51e-09 C ATCCTTGTTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrVII:115260-115771 + 22 1.51e-09 CGAAGAACTC ATCCTTGTTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrIV:359363-359824 + 33 1.51e-09 CGAAGAACTC ATCCTTGTTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXVI:559987-560506 - 68 2.59e-09 AAATTG AGCGGATTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXIII:352072-352493 + 47 2.59e-09 TATGAATATA AGCGGATTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrVIII:358245-358797 - 73 2.59e-09 A AGCGGATTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrVIII:237747-238154 - 14 2.59e-09 ACAAATAGTA AGCGGATTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrII:36163-36593 + 69 2.59e-09 ATTAGTTGTA AGCGGATTTAGCTCAGTTGGGAGAGCG CCAGA chrXII:687658-688143 - 57 2.95e-09 CATAAATAAT AGGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXI:379447-379927 + 42 2.95e-09 ACAGATTAAT AGGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrX:378119-378578 + 61 2.95e-09 ATAAATTAAT AGGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXVI:622328-622844 - 70 3.36e-09 GATA TGCGGATTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXV:663480-664261 - 40 3.81e-09 CAACAAATAG TGGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXI:307965-308429 - 45 3.81e-09 AACAATTAAG TGGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrVII:823265-823709 + 44 3.81e-09 CCAATAAGAG TGGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrVII:412112-412589 - 42 3.81e-09 ATCAAAAAAC TGGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrV:469225-469660 + 64 3.81e-09 AAGAAATAAT TGGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXVI:860125-860655 + 38 7.03e-09 GTAAATAACA AGCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrX:531523-532217 + 7 7.03e-09 TTAGTG AGCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrX:396537-397004 - 51 7.03e-09 ATCAAAAGTA AGCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrVII:930744-931214 - 69 7.03e-09 CAGTA AGCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrVI:162011-162421 + 61 7.03e-09 CAAGAAAACA AGCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrIV:83313-83817 + 32 7.03e-09 AAGTTCACTT AGCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrXI:83950-84429 + 68 7.92e-09 AAAATTTGTA TGGAGGGTTGGCCGAGTGGTCTAAGGC GGCAGA chrX:424309-424734 - 19 7.92e-09 TTAAATAAGA TGGAGGGTTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrXV:487240-487735 + 1 8.90e-09 . AGACTCCATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXV:228085-228633 + 21 8.90e-09 ATAAAATATT AGACTCCATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXIV:102498-102949 + 42 8.90e-09 ATATATTATA AGACTCCATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXIII:195910-196403 - 39 8.90e-09 CAAGTTCACA AGGGCGTGTGGTCTAGTGGTATGATTC TCGCTTTGGG chrXIV:632396-632892 + 4 1.12e-08 AAG TGACTCCATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXII:962781-963344 - 18 1.12e-08 GTATTATCGA CGGAGGGTTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrVI:137243-137898 - 14 1.12e-08 CAAAAGTGAC TGACTCCATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrIV:519550-519949 + 43 1.12e-08 AGTGATTTTA CGGAGGGTTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrIII:127527-127910 + 47 1.12e-08 CAAGATAAAA TGACTCCATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXVI:571959-572569 + 54 1.25e-08 CACAATACTT CGCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrXIII:183779-184185 - 11 1.25e-08 CAATAAAGAT CGCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrXVI:810472-810863 + 58 1.57e-08 TCATTATTTG CGACTCCATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXIII:504660-505217 + 6 1.57e-08 ATAAG TGGTTGTTTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrXII:628128-628638 + 49 1.57e-08 AACAAATAAG TGGTTGTTTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrVII:857237-857684 - 56 1.57e-08 AACAAATAAG TGGTTGTTTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrVI:101062-101681 + 54 1.57e-08 AACAATAATT CGGGCGTGTGGTCTAGTGGTATGATTC TCGCTTTGGG chrI:138913-139348 + 71 1.57e-08 TCAATTAGTA CGGGCGTGTGGTCTAGTGGTATGATTC TCG chrIV:1175582-1176070 + 52 2.96e-08 TACAAAACAA AGCTTCAGTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrXIV:96023-96631 - 10 3.28e-08 ATCCAACACA TGGGCGGTTAGTGTAGTGGTTATCATC CCACCCTTC chrX:390841-391317 - 61 3.63e-08 CAAGAAATAG TGCTTCAGTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrXV:110839-111272 - 3 4.44e-08 ACAATTAACC CGGGCGGTTAGTGTAGTGGTTATCATC CC chrVII:779391-779935 + 2 4.44e-08 C CGGGCGGTTAGTGTAGTGGTTATCATC CCACCCTTCC chrXV:976194-976737 + 5 4.90e-08 TGTG CGCTTCAGTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrV:250101-250526 + 22 4.90e-08 ACAGTTGTAC TGGTCCTATAGTGTAGTGGTTATCACT TTCGGTTTTG chrIII:168082-168618 - 47 4.90e-08 CAAGAAGTCC TGGTCCTATAGTGTAGTGGTTATCACT TTCGGTTTTG chrXII:448499-448976 - 9 6.53e-08 CAAGAAGTTC CGGTCCTATAGTGTAGTGGTTATCACT TTCGGTTT chrVIII:134052-134607 + 41 6.53e-08 CAGTAAGTTC CGGTCCTATAGTGTAGTGGTTATCACT TTCGGTTTTG chrIV:802536-803010 - 54 6.53e-08 CATGAATTGT CGGTCCTATAGTGTAGTGGTTATCACT TTCGGTTTTG chrIV:644977-645399 - 61 6.53e-08 ACAGTTGTTA CGGTCCTATAGTGTAGTGGTTATCACT TTCGGTTTTG chrV:130836-131415 - 53 7.88e-08 AATAATTAAG AGGTTTTATAGTGTAGTGGTTATCACT TTCGGTTTTG chrIV:1256867-1257292 - 25 8.65e-08 AGATCTTCTT AGCGAAAGTGGTTCAGTGGTTAGAATT CATGCTTCCC chrV:492200-492579 - 60 1.48e-07 TGAACATCCT ATTCCTCGTGGCCCAATGGTCACGGCG TCTGGCTACG chrVIII:466646-467297 + 68 1.91e-07 TTGTATTTTT AGCCTCCTTAGCTTAGTGGTAGAGCGT TGCACT chrXI:46588-47009 - 33 2.08e-07 AAAATTACTC AGCCCTTTTGGCCAAGTGGTAAGGCAT CGCACTCGTA chrVII:1004010-1004422 + 49 2.26e-07 TTCAAGGGTT TGCCTCCTTAGCTTAGTGGTAGAGCGT TGCACTTGTA chrVII:661524-661951 + 61 2.26e-07 GGTAAAAATT TGCCTCCTTAGCTTAGTGGTAGAGCGT TGCACTTGTA chrII:350567-351141 + 22 3.95e-07 ATCAATAAAA GGGTTTTATAGTGTAGTGGTTATCACT TTCGGTTTTG chrXIII:362851-363306 + 35 4.96e-07 AATCCAAGTT TGCCATCTTAGTATAGTGGTTAGTACA CATCGTTGTG chrVIII:62504-62997 + 54 4.96e-07 TAAAATCATA TGCCATCTTAGTATAGTGGTTAGTACA CATCGTTGTG chrVII:110397-110929 - 58 4.96e-07 AATAATTACC TGCCATCTTAGTATAGTGGTTAGTACA CATCGTTGTG chrXII:426874-427466 + 11 6.20e-07 AGTGTTTCTT ATCCGTGATAGTTTAATGGTCAGAATG GGCGCTTGTC chrX:204498-205005 + 33 6.20e-07 CAACATAAAA ATCCGTGATAGTTTAATGGTCAGAATG GGCGCTTGTC chrVII:73649-74239 + 44 6.20e-07 GATAAGATAC TTGCTTCATAGTTTAGTTGTAAAATTG AAGTTCAGTA chrV:434376-434784 - 57 6.20e-07 ATTGAAAAGT CGCCATCTTAGTATAGTGGTTAGTACA CATCGTTGTG chrIX:336120-336654 - 58 6.20e-07 ATAGAAACAA ATCCGTGATAGTTTAATGGTCAGAATG GGCGCTTGTC chrXV:340131-340598 - 32 6.66e-07 CTCAAGATCT GTTCCTCGTGGCCCAATGGTCACGGCG TCTGGCTACG chrXIV:631675-632141 - 34 7.16e-07 CAACTTCTAC CGGGCGTGTGGTCTAGAGGTATGATTC TCGCTTAGGG chrXI:513210-513607 - 20 7.16e-07 ACAAATAACG TTCCGTGATAGTTTAATGGTCAGAATG GGCGCTTGTC chrX:374193-374833 - 7 7.16e-07 GCTTTGTTTC TTCCGTGATAGTTTAATGGTCAGAATG GGCGCT chrX:355130-355744 + 68 7.16e-07 GCTTTGTTTC TTCCGTGATAGTTTAATGGTCAGAATG GGCGCT chrVII:531434-531809 + 38 7.16e-07 CTCGAGTTAC TTCCGTGATAGTTTAATGGTCAGAATG GGCGCTTGTC chrIV:568675-569335 + 8 7.16e-07 TTGTTTC TTCCGTGATAGTTTAATGGTCAGAATG GGCGCTTGTC chrVIII:34497-36327 - 14 1.25e-06 CCGAAGACGA AGCTGCTTTGGCTAAGTTGGTTTCTAC CATTGACGCT chrVII:706920-707350 - 69 1.52e-06 AATCA AGCTCGTATGGCGCAGTGGTAGCGCAG CAGATTGCAA chrXIII:463310-463889 + 4 2.22e-06 TTT GTCCGTGATAGTTTAATGGTCAGAATG GGCGCTTGTC chrVII:736170-736546 + 31 2.22e-06 TAATTTCAAT AGCTCGCGTGGCGTAATGGCAACGCGT CTGACTTCTA chrIV:1075292-1075756 - 45 8.04e-06 TCCGTAATAT TGTTCCAATAGTGTAGCGGCTATCACG TTGCCTTCAC chrXI:1-1067 + 64 8.89e-06 ATCATTATTC ACGGCACTTGCCTCAGCGGTTTATACC CTGTGCAATT chrX:517638-518164 - 8 1.72e-05 CATAAAAGTT AAGCGCCGTGGCGCAGTGGAAGCGCGC AGGGCTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSBBNBDTRGYBYAGTGGKTARAGSS MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:197170-197613 4.2e-12 18_[-2]_55 chrXIII:768163-768638 6.7e-12 65_[-2]_8 chrVII:774114-774619 6.7e-12 31_[+2]_42 chrXV:854019-854435 8.4e-12 56_[-2]_17 chrXII:214651-215161 8.4e-12 73_[-2] chrX:523875-524349 8.4e-12 5_[-2]_68 chrIV:980757-981263 8.4e-12 69_[-2]_4 chrIV:437538-438076 8.4e-12 13_[+2]_60 chrXVI:856744-857098 1.3e-11 29_[+2]_44 chrXIII:259013-259488 1.3e-11 13_[-2]_60 chrXII:167720-168284 1.3e-11 47_[-2]_26 chrVIII:132787-133353 1.3e-11 61_[-2]_12 chrVI:204783-205215 1.3e-11 21_[-2]_52 chrI:182347-182787 1.3e-11 60_[-2]_13 chrIII:227717-228210 2.9e-11 27_[+2]_46 chrV:551034-551587 6.3e-11 72_[-2]_1 chrXIV:602093-602541 9.1e-11 43_[+2]_30 chrXIV:569637-570167 9.1e-11 62_[-2]_11 chrV:443016-443477 9.1e-11 53_[-2]_20 chrXII:605152-605640 2.5e-10 60_[-2]_13 chrXVI:581826-582317 4.1e-10 39_[+2]_34 chrXII:731910-732261 4.1e-10 53_[+2]_20 chrX:617758-618172 4.1e-10 2_[+2]_71 chrVII:876033-876766 4.1e-10 43_[+2]_30 chrVII:121978-122643 4.1e-10 7_[+2]_66 chrV:435627-436018 4.1e-10 26_[-2]_47 chrXV:113508-114186 4.7e-10 3_[+2]_70 chrVIII:115944-116432 4.7e-10 15_[-2]_58 chrIX:174829-175261 4.7e-10 34_[+2]_39 chrXVI:689351-689876 5.5e-10 [+2]_73 chrVI:226557-226951 5.5e-10 30_[-2]_43 chrXV:353863-354318 6.4e-10 47_[-2]_26 chrXIV:374679-375107 1.1e-09 24_[+2]_49 chrXII:784169-784545 1.1e-09 45_[+2]_28 chrXVI:769026-769502 1.5e-09 62_[-2]_11 chrXII:875190-875657 1.5e-09 1_[+2]_72 chrVII:115260-115771 1.5e-09 21_[+2]_52 chrIV:359363-359824 1.5e-09 32_[+2]_41 chrXVI:559987-560506 2.6e-09 67_[-2]_6 chrXIII:352072-352493 2.6e-09 46_[+2]_27 chrVIII:358245-358797 2.6e-09 72_[-2]_1 chrVIII:237747-238154 2.6e-09 13_[-2]_60 chrII:36163-36593 2.6e-09 68_[+2]_5 chrXII:687658-688143 3e-09 56_[-2]_17 chrXI:379447-379927 3e-09 41_[+2]_32 chrX:378119-378578 3e-09 60_[+2]_13 chrXVI:622328-622844 3.4e-09 69_[-2]_4 chrXV:663480-664261 3.8e-09 39_[-2]_34 chrXI:307965-308429 3.8e-09 44_[-2]_29 chrVII:823265-823709 3.8e-09 43_[+2]_30 chrVII:412112-412589 3.8e-09 41_[-2]_32 chrV:469225-469660 3.8e-09 63_[+2]_10 chrXVI:860125-860655 7e-09 37_[+2]_36 chrX:531523-532217 7e-09 6_[+2]_67 chrX:396537-397004 7e-09 50_[-2]_23 chrVII:930744-931214 7e-09 68_[-2]_5 chrVI:162011-162421 7e-09 60_[+2]_13 chrIV:83313-83817 7e-09 31_[+2]_42 chrXI:83950-84429 7.9e-09 67_[+2]_6 chrX:424309-424734 7.9e-09 18_[-2]_55 chrXV:487240-487735 8.9e-09 [+2]_73 chrXV:228085-228633 8.9e-09 20_[+2]_53 chrXIV:102498-102949 8.9e-09 41_[+2]_32 chrXIII:195910-196403 8.9e-09 38_[-2]_35 chrXIV:632396-632892 1.1e-08 3_[+2]_70 chrXII:962781-963344 1.1e-08 17_[-2]_56 chrVI:137243-137898 1.1e-08 13_[-2]_60 chrIV:519550-519949 1.1e-08 42_[+2]_31 chrIII:127527-127910 1.1e-08 46_[+2]_27 chrXVI:571959-572569 1.3e-08 53_[+2]_20 chrXIII:183779-184185 1.3e-08 10_[-2]_63 chrXVI:810472-810863 1.6e-08 57_[+2]_16 chrXIII:504660-505217 1.6e-08 5_[+2]_68 chrXII:628128-628638 1.6e-08 48_[+2]_25 chrVII:857237-857684 1.6e-08 55_[-2]_18 chrVI:101062-101681 1.6e-08 53_[+2]_20 chrI:138913-139348 1.6e-08 70_[+2]_3 chrIV:1175582-1176070 3e-08 51_[+2]_22 chrXIV:96023-96631 3.3e-08 9_[-2]_64 chrX:390841-391317 3.6e-08 60_[-2]_13 chrXV:110839-111272 4.4e-08 2_[-2]_71 chrVII:779391-779935 4.4e-08 1_[+2]_72 chrXV:976194-976737 4.9e-08 4_[+2]_69 chrV:250101-250526 4.9e-08 21_[+2]_52 chrIII:168082-168618 4.9e-08 46_[-2]_27 chrXII:448499-448976 6.5e-08 8_[-2]_65 chrVIII:134052-134607 6.5e-08 40_[+2]_33 chrIV:802536-803010 6.5e-08 53_[-2]_20 chrIV:644977-645399 6.5e-08 60_[-2]_13 chrV:130836-131415 7.9e-08 52_[-2]_21 chrIV:1256867-1257292 8.6e-08 24_[-2]_49 chrV:492200-492579 1.5e-07 59_[-2]_14 chrVIII:466646-467297 1.9e-07 67_[+2]_6 chrXI:46588-47009 2.1e-07 32_[-2]_41 chrVII:1004010-1004422 2.3e-07 48_[+2]_25 chrVII:661524-661951 2.3e-07 60_[+2]_13 chrII:350567-351141 3.9e-07 21_[+2]_52 chrXIII:362851-363306 5e-07 34_[+2]_39 chrVIII:62504-62997 5e-07 53_[+2]_20 chrVII:110397-110929 5e-07 57_[-2]_16 chrXII:426874-427466 6.2e-07 10_[+2]_63 chrX:204498-205005 6.2e-07 32_[+2]_41 chrVII:73649-74239 6.2e-07 43_[+2]_30 chrV:434376-434784 6.2e-07 56_[-2]_17 chrIX:336120-336654 6.2e-07 57_[-2]_16 chrXV:340131-340598 6.7e-07 31_[-2]_42 chrXIV:631675-632141 7.2e-07 33_[-2]_40 chrXI:513210-513607 7.2e-07 19_[-2]_54 chrX:374193-374833 7.2e-07 6_[-2]_67 chrX:355130-355744 7.2e-07 67_[+2]_6 chrVII:531434-531809 7.2e-07 37_[+2]_36 chrIV:568675-569335 7.2e-07 7_[+2]_66 chrVIII:34497-36327 1.2e-06 13_[-2]_60 chrVII:706920-707350 1.5e-06 68_[-2]_5 chrXIII:463310-463889 2.2e-06 3_[+2]_70 chrVII:736170-736546 2.2e-06 30_[+2]_43 chrIV:1075292-1075756 8e-06 44_[-2]_29 chrXI:1-1067 8.9e-06 63_[+2]_10 chrX:517638-518164 1.7e-05 7_[-2]_66 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSBBNBDTRGYBYAGTGGKTARAGSS MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WGSBBNBDTRGYBYAGTGGKTARAGSS width=27 seqs=119 chrX:197170-197613 ( 19) AGGGCGTGTGGCGTAGTCGGTAGCGCG 1 chrXIII:768163-768638 ( 66) TGGGCGTGTGGCGTAGTCGGTAGCGCG 1 chrVII:774114-774619 ( 32) TGGGCGTGTGGCGTAGTCGGTAGCGCG 1 chrXV:854019-854435 ( 57) AGGGCACATGGCGCAGTTGGTAGCGCG 1 chrXII:214651-215161 ( 74) AGGGCACATGGCGCAGTTGGTAGCGCG 1 chrX:523875-524349 ( 6) AGGCAACTTGGCCGAGTGGTTAAGGCG 1 chrIV:980757-981263 ( 70) AGGCAACTTGGCCGAGTGGTTAAGGCG 1 chrIV:437538-438076 ( 14) AGGCAACTTGGCCGAGTGGTTAAGGCG 1 chrXVI:856744-857098 ( 30) CGGGCGTGTGGCGTAGTCGGTAGCGCG 1 chrXIII:259013-259488 ( 14) TGGCAACTTGGCCGAGTGGTTAAGGCG 1 chrXII:167720-168284 ( 48) TGGCAACTTGGCCGAGTGGTTAAGGCG 1 chrVIII:132787-133353 ( 62) TGGCAACTTGGCCGAGTGGTTAAGGCG 1 chrVI:204783-205215 ( 22) CGGGCGTGTGGCGTAGTCGGTAGCGCG 1 chrI:182347-182787 ( 61) TGGCAACTTGGCCGAGTGGTTAAGGCG 1 chrIII:227717-228210 ( 28) TGGCACTATGGCCGAGTGGTTAAGGCG 1 chrV:551034-551587 ( 73) AGGTCTCTTGGCCCAGTTGGTTAAGGC 1 chrXIV:602093-602541 ( 44) TGGTCTCTTGGCCCAGTTGGTTAAGGC 1 chrXIV:569637-570167 ( 63) TGGTCTCTTGGCCCAGTTGGTTAAGGC 1 chrV:443016-443477 ( 54) TGGTCTCTTGGCCCAGTTGGTTAAGGC 1 chrXII:605152-605640 ( 61) TGCTCGTGTAGCTCAGTGGTTAGAGCT 1 chrXVI:581826-582317 ( 40) AGCCTTGTTGGCGCAATCGGTAGCGCG 1 chrXII:731910-732261 ( 54) TGGGAGTTTGGCCGAGTGGTTTAAGGC 1 chrX:617758-618172 ( 3) TGGGAGTTTGGCCGAGTGGTTTAAGGC 1 chrVII:876033-876766 ( 44) AGCCTTGTTGGCGCAATCGGTAGCGCG 1 chrVII:121978-122643 ( 8) AGCCTTGTTGGCGCAATCGGTAGCGCG 1 chrV:435627-436018 ( 27) AGCCTTGTTGGCGCAATCGGTAGCGCG 1 chrXV:113508-114186 ( 4) AGCTTCTATGGCCAAGTTGGTAAGGCG 1 chrVIII:115944-116432 ( 16) AGCTTCTATGGCCAAGTTGGTAAGGCG 1 chrIX:174829-175261 ( 35) AGCTTCTATGGCCAAGTTGGTAAGGCG 1 chrXVI:689351-689876 ( 1) GGGCACTATGGCCGAGTGGTTAAGGCG 1 chrVI:226557-226951 ( 31) TGCCTTGTTGGCGCAATCGGTAGCGCG 1 chrXV:353863-354318 ( 48) TGCTTCTATGGCCAAGTTGGTAAGGCG 1 chrXIV:374679-375107 ( 25) AGCGGACTTAGCTCAGTTGGGAGAGCG 1 chrXII:784169-784545 ( 46) CGTCCCAGTGGCCGAGTGGTTAAGGCG 1 chrXVI:769026-769502 ( 63) ATCCTTGTTAGCTCAGTTGGTAGAGCG 1 chrXII:875190-875657 ( 2) ATCCTTGTTAGCTCAGTTGGTAGAGCG 1 chrVII:115260-115771 ( 22) ATCCTTGTTAGCTCAGTTGGTAGAGCG 1 chrIV:359363-359824 ( 33) ATCCTTGTTAGCTCAGTTGGTAGAGCG 1 chrXVI:559987-560506 ( 68) AGCGGATTTAGCTCAGTTGGGAGAGCG 1 chrXIII:352072-352493 ( 47) AGCGGATTTAGCTCAGTTGGGAGAGCG 1 chrVIII:358245-358797 ( 73) AGCGGATTTAGCTCAGTTGGGAGAGCG 1 chrVIII:237747-238154 ( 14) AGCGGATTTAGCTCAGTTGGGAGAGCG 1 chrII:36163-36593 ( 69) AGCGGATTTAGCTCAGTTGGGAGAGCG 1 chrXII:687658-688143 ( 57) AGGTTTCGTGGTCTAGTCGGTTATGGC 1 chrXI:379447-379927 ( 42) AGGTTTCGTGGTCTAGTCGGTTATGGC 1 chrX:378119-378578 ( 61) AGGTTTCGTGGTCTAGTCGGTTATGGC 1 chrXVI:622328-622844 ( 70) TGCGGATTTAGCTCAGTTGGGAGAGCG 1 chrXV:663480-664261 ( 40) TGGTTTCGTGGTCTAGTCGGTTATGGC 1 chrXI:307965-308429 ( 45) TGGTTTCGTGGTCTAGTCGGTTATGGC 1 chrVII:823265-823709 ( 44) TGGTTTCGTGGTCTAGTCGGTTATGGC 1 chrVII:412112-412589 ( 42) TGGTTTCGTGGTCTAGTCGGTTATGGC 1 chrV:469225-469660 ( 64) TGGTTTCGTGGTCTAGTCGGTTATGGC 1 chrXVI:860125-860655 ( 38) AGCGCAAGTGGTTTAGTGGTAAAATCC 1 chrX:531523-532217 ( 7) AGCGCAAGTGGTTTAGTGGTAAAATCC 1 chrX:396537-397004 ( 51) AGCGCAAGTGGTTTAGTGGTAAAATCC 1 chrVII:930744-931214 ( 69) AGCGCAAGTGGTTTAGTGGTAAAATCC 1 chrVI:162011-162421 ( 61) AGCGCAAGTGGTTTAGTGGTAAAATCC 1 chrIV:83313-83817 ( 32) AGCGCAAGTGGTTTAGTGGTAAAATCC 1 chrXI:83950-84429 ( 68) TGGAGGGTTGGCCGAGTGGTCTAAGGC 1 chrX:424309-424734 ( 19) TGGAGGGTTGGCCGAGTGGTCTAAGGC 1 chrXV:487240-487735 ( 1) AGACTCCATGGCCAAGTTGGTTAAGGC 1 chrXV:228085-228633 ( 21) AGACTCCATGGCCAAGTTGGTTAAGGC 1 chrXIV:102498-102949 ( 42) AGACTCCATGGCCAAGTTGGTTAAGGC 1 chrXIII:195910-196403 ( 39) AGGGCGTGTGGTCTAGTGGTATGATTC 1 chrXIV:632396-632892 ( 4) TGACTCCATGGCCAAGTTGGTTAAGGC 1 chrXII:962781-963344 ( 18) CGGAGGGTTGGCCGAGTGGTCTAAGGC 1 chrVI:137243-137898 ( 14) TGACTCCATGGCCAAGTTGGTTAAGGC 1 chrIV:519550-519949 ( 43) CGGAGGGTTGGCCGAGTGGTCTAAGGC 1 chrIII:127527-127910 ( 47) TGACTCCATGGCCAAGTTGGTTAAGGC 1 chrXVI:571959-572569 ( 54) CGCGCAAGTGGTTTAGTGGTAAAATCC 1 chrXIII:183779-184185 ( 11) CGCGCAAGTGGTTTAGTGGTAAAATCC 1 chrXVI:810472-810863 ( 58) CGACTCCATGGCCAAGTTGGTTAAGGC 1 chrXIII:504660-505217 ( 6) TGGTTGTTTGGCCGAGCGGTCTAAGGC 1 chrXII:628128-628638 ( 49) TGGTTGTTTGGCCGAGCGGTCTAAGGC 1 chrVII:857237-857684 ( 56) TGGTTGTTTGGCCGAGCGGTCTAAGGC 1 chrVI:101062-101681 ( 54) CGGGCGTGTGGTCTAGTGGTATGATTC 1 chrI:138913-139348 ( 71) CGGGCGTGTGGTCTAGTGGTATGATTC 1 chrIV:1175582-1176070 ( 52) AGCTTCAGTAGCTCAGTAGGAAGAGCG 1 chrXIV:96023-96631 ( 10) TGGGCGGTTAGTGTAGTGGTTATCATC 1 chrX:390841-391317 ( 61) TGCTTCAGTAGCTCAGTAGGAAGAGCG 1 chrXV:110839-111272 ( 3) CGGGCGGTTAGTGTAGTGGTTATCATC 1 chrVII:779391-779935 ( 2) CGGGCGGTTAGTGTAGTGGTTATCATC 1 chrXV:976194-976737 ( 5) CGCTTCAGTAGCTCAGTAGGAAGAGCG 1 chrV:250101-250526 ( 22) TGGTCCTATAGTGTAGTGGTTATCACT 1 chrIII:168082-168618 ( 47) TGGTCCTATAGTGTAGTGGTTATCACT 1 chrXII:448499-448976 ( 9) CGGTCCTATAGTGTAGTGGTTATCACT 1 chrVIII:134052-134607 ( 41) CGGTCCTATAGTGTAGTGGTTATCACT 1 chrIV:802536-803010 ( 54) CGGTCCTATAGTGTAGTGGTTATCACT 1 chrIV:644977-645399 ( 61) CGGTCCTATAGTGTAGTGGTTATCACT 1 chrV:130836-131415 ( 53) AGGTTTTATAGTGTAGTGGTTATCACT 1 chrIV:1256867-1257292 ( 25) AGCGAAAGTGGTTCAGTGGTTAGAATT 1 chrV:492200-492579 ( 60) ATTCCTCGTGGCCCAATGGTCACGGCG 1 chrVIII:466646-467297 ( 68) AGCCTCCTTAGCTTAGTGGTAGAGCGT 1 chrXI:46588-47009 ( 33) AGCCCTTTTGGCCAAGTGGTAAGGCAT 1 chrVII:1004010-1004422 ( 49) TGCCTCCTTAGCTTAGTGGTAGAGCGT 1 chrVII:661524-661951 ( 61) TGCCTCCTTAGCTTAGTGGTAGAGCGT 1 chrII:350567-351141 ( 22) GGGTTTTATAGTGTAGTGGTTATCACT 1 chrXIII:362851-363306 ( 35) TGCCATCTTAGTATAGTGGTTAGTACA 1 chrVIII:62504-62997 ( 54) TGCCATCTTAGTATAGTGGTTAGTACA 1 chrVII:110397-110929 ( 58) TGCCATCTTAGTATAGTGGTTAGTACA 1 chrXII:426874-427466 ( 11) ATCCGTGATAGTTTAATGGTCAGAATG 1 chrX:204498-205005 ( 33) ATCCGTGATAGTTTAATGGTCAGAATG 1 chrVII:73649-74239 ( 44) TTGCTTCATAGTTTAGTTGTAAAATTG 1 chrV:434376-434784 ( 57) CGCCATCTTAGTATAGTGGTTAGTACA 1 chrIX:336120-336654 ( 58) ATCCGTGATAGTTTAATGGTCAGAATG 1 chrXV:340131-340598 ( 32) GTTCCTCGTGGCCCAATGGTCACGGCG 1 chrXIV:631675-632141 ( 34) CGGGCGTGTGGTCTAGAGGTATGATTC 1 chrXI:513210-513607 ( 20) TTCCGTGATAGTTTAATGGTCAGAATG 1 chrX:374193-374833 ( 7) TTCCGTGATAGTTTAATGGTCAGAATG 1 chrX:355130-355744 ( 68) TTCCGTGATAGTTTAATGGTCAGAATG 1 chrVII:531434-531809 ( 38) TTCCGTGATAGTTTAATGGTCAGAATG 1 chrIV:568675-569335 ( 8) TTCCGTGATAGTTTAATGGTCAGAATG 1 chrVIII:34497-36327 ( 14) AGCTGCTTTGGCTAAGTTGGTTTCTAC 1 chrVII:706920-707350 ( 69) AGCTCGTATGGCGCAGTGGTAGCGCAG 1 chrXIII:463310-463889 ( 4) GTCCGTGATAGTTTAATGGTCAGAATG 1 chrVII:736170-736546 ( 31) AGCTCGCGTGGCGTAATGGCAACGCGT 1 chrIV:1075292-1075756 ( 45) TGTTCCAATAGTGTAGCGGCTATCACG 1 chrXI:1-1067 ( 64) ACGGCACTTGCCTCAGCGGTTTATACC 1 chrX:517638-518164 ( 8) AAGCGCCGTGGCGCAGTGGAAGCGCGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSBBNBDTRGYBYAGTGGKTARAGSS MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 27 n= 43660 bayes= 6.44393 E= 3.0e-365 45 -22 -247 27 -522 -446 219 -122 -242 126 131 -322 -322 109 58 -10 -122 89 -1 10 -52 39 12 10 -142 93 18 2 -10 -1354 66 39 -1354 -1354 -1354 167 23 -1354 176 -1354 -1354 -446 242 -1354 -1354 170 -1354 33 -322 115 29 6 -152 53 -22 56 167 -1354 -1354 -1354 -114 -1354 221 -1354 -522 -214 -1354 160 -364 -30 162 -32 -1354 -1354 243 -1354 -522 -347 118 82 -70 -30 -166 93 110 -1354 -214 -14 56 -214 106 -152 63 18 6 -152 -47 -166 168 -142 -364 156 58 -105 -322 106 129 -132 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSBBNBDTRGYBYAGTGGKTARAGSS MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 27 nsites= 119 E= 3.0e-365 0.428571 0.159664 0.033613 0.378151 0.008403 0.008403 0.848739 0.134454 0.058824 0.445378 0.462185 0.033613 0.033613 0.394958 0.277311 0.294118 0.134454 0.344538 0.184874 0.336134 0.218487 0.243697 0.201681 0.336134 0.117647 0.352941 0.210084 0.319328 0.294118 0.000000 0.294118 0.411765 0.000000 0.000000 0.000000 1.000000 0.369748 0.000000 0.630252 0.000000 0.000000 0.008403 0.991597 0.000000 0.000000 0.605042 0.000000 0.394958 0.033613 0.411765 0.226891 0.327731 0.109244 0.268908 0.159664 0.462185 1.000000 0.000000 0.000000 0.000000 0.142857 0.000000 0.857143 0.000000 0.008403 0.042017 0.000000 0.949580 0.025210 0.151261 0.571429 0.252101 0.000000 0.000000 1.000000 0.000000 0.008403 0.016807 0.420168 0.554622 0.193277 0.151261 0.058824 0.596639 0.672269 0.000000 0.042017 0.285714 0.462185 0.042017 0.386555 0.109244 0.487395 0.210084 0.193277 0.109244 0.226891 0.058824 0.596639 0.117647 0.025210 0.546218 0.277311 0.151261 0.033613 0.386555 0.453782 0.126050 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSBBNBDTRGYBYAGTGGKTARAGSS MEME-2 regular expression -------------------------------------------------------------------------------- [AT]G[GC][CTG][CT][TCAG][CTG][TAG]T[GA]G[CT][CTG][TC]AGT[GT]G[TG]T[AT][AG][AC][GA][CG][GC] -------------------------------------------------------------------------------- Time 646.73 secs. ******************************************************************************** ******************************************************************************** MOTIF GKTARSGCGYCWSACTHNTAATSWGRAGRT MEME-3 width = 30 sites = 30 llr = 638 E-value = 6.2e-096 ******************************************************************************** -------------------------------------------------------------------------------- Motif GKTARSGCGYCWSACTHNTAATSWGRAGRT MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::a5:1:3:22:6::431a7::4158:5: pos.-specific C :12::5:a:361328:223:22621::1:1 probability G a6::449:7:1262::13:::24164195: matrix T :38:2::::6141:2a336:16:2211::9 bits 2.4 * 2.2 * * 1.9 * ** 1.7 * * ** * * * Relative 1.5 * * ** ** * * * Entropy 1.2 * * **** ** * * * * (30.7 bits) 1.0 **** **** * ** * * **** 0.7 **** ****** * ** *** * ****** 0.5 *********** **** ***** ****** 0.2 *********** **** ***** ****** 0.0 ------------------------------ Multilevel GGTAACGCGTCTGACTATTAATCAGAAGAT consensus T GG ACAACCT TAC CGGTTG G sequence G G CG C C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GKTARSGCGYCWSACTHNTAATSWGRAGRT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chrX:374193-374833 - 69 3.86e-14 AT GGCAACGCGTCTGACTTCTAATCAGAAGAT TATGGGTTCG chrX:355130-355744 + 3 3.86e-14 AT GGCAACGCGTCTGACTTCTAATCAGAAGAT TATGGGTTCG chrVII:405269-405774 + 15 3.86e-14 GTGGCGTAAT GGCAACGCGTCTGACTTCTAATCAGAAGAT TATGGGTTCG chrII:405615-406251 + 11 3.86e-14 GTGGCGTAAT GGCAACGCGTCTGACTTCTAATCAGAAGAT TATGGGTTCG chrXIV:104580-105156 + 4 5.65e-14 GTT GGTAAGGCGCCACACTAGTAATGTGGAGAT CATCGGTTCA chrIV:434013-434554 - 57 5.65e-14 TGGCCAAGTT GGTAAGGCGCCACACTAGTAATGTGGAGAT CATCGGTTCA chrII:266151-266729 + 5 5.65e-14 AGTT GGTAAGGCGCCACACTAGTAATGTGGAGAT CATCGGTTCA chrXIII:480368-480908 - 59 3.83e-13 TGGCGCAATC GGTAGCGCGTATGACTCTTAATCATAAGGT TAGGGGTTCG chrXI:202820-203300 + 6 3.83e-13 CAATC GGTAGCGCGTATGACTCTTAATCATAAGGT TAGGGGTTCG chrX:414792-415265 + 5 3.83e-13 AATC GGTAGCGCGTATGACTCTTAATCATAAGGT TAGGGGTTCG chrV:135170-135690 - 71 3.83e-13 . GGTAGCGCGTATGACTCTTAATCATAAGGT TAGGGGTTCG chrIV:1201518-1202113 + 2 3.83e-13 C GGTAGCGCGTATGACTCTTAATCATAAGGT TAGGGGTTCG chrI:166051-166586 + 16 5.61e-12 TGGCGCAGTT GGTAGCGCGCTTCCCTTGCAAGGAAGAGGT CATCGGTTCG chrXVI:743999-744677 + 12 1.72e-10 TTAGCTTAGT GGTAGAGCGTTGCACTTGTAATGCAAAGGT CGTTAGTTCA chrXII:975757-976255 - 53 2.70e-10 GGCCAAGTTG GTTAAGGCGTGCGACTGTTAATCGCAAGAT CGTGAGTTCA chrVII:730948-731437 + 13 2.70e-10 GGCCAAGTTG GTTAAGGCGTGCGACTGTTAATCGCAAGAT CGTGAGTTCA chrXVI:880041-880588 - 58 4.14e-10 GGCCCAGTTG GTTAAGGCACCGTGCTAATAACGCGGGGAT CAGCGGTTCG chrXII:734698-735006 + 18 4.14e-10 GGCCCAGTTG GTTAAGGCACCGTGCTAATAACGCGGGGAT CAGCGGTTCG chrII:197208-197886 + 15 4.14e-10 GGCCCAGTTG GTTAAGGCACCGTGCTAATAACGCGGGGAT CAGCGGTTCG chrXIII:586393-586918 - 57 5.75e-10 GGTCTAGTCG GTTATGGCATCTGCTTAACACGCAGAACGT CCCCAGTTCG chrXIII:372172-372730 - 70 5.75e-10 G GTTATGGCATCTGCTTAACACGCAGAACGT CCCCAGTTCG chrVIII:85026-85582 - 70 5.75e-10 G GTTATGGCATCTGCTTAACACGCAGAACGT CCCCAGTTCG chrXII:656701-657212 - 54 1.07e-09 TGGCGTAGTC GGTAGCGCGCTCCCTTAGCATGGGAGAGGT CTCCGGTTCG chrIV:410163-410716 + 7 1.07e-09 GTAGTC GGTAGCGCGCTCCCTTAGCATGGGAGAGGT CTCCGGTTCG chrXV:710013-710499 + 11 2.73e-09 GTGGCGCAGT GGAAGCGCGCAGGGCTCATAACCCTGATGT CCTCGGATCG chrXVI:435614-436201 - 62 1.27e-08 TGGCGCAGT GGTAGCGCAGCAGATTGCAAATCTGTTGGT CCTTAGTTCG chrXIII:290448-291159 + 65 1.27e-08 TAGTGTAACG GCTATCACATCACGCTTTCACCGTGGAGAC CGGGGT chrIX:370218-370619 + 66 1.27e-08 TAGTGTAACG GCTATCACATCACGCTTTCACCGTGGAGAC CGGGG chrV:288173-288751 - 66 1.86e-08 GAGTG GTTAAGGCGACAGACTTGAAATCTGTTGGG CTCTGCCCGC chrII:326528-327098 - 55 1.86e-08 GGTCCAGTGG TTCAAGACGTCGCCTTTACACGGCGAAGAT CCCGAGTTCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GKTARSGCGYCWSACTHNTAATSWGRAGRT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:374193-374833 3.9e-14 68_[-3]_2 chrX:355130-355744 3.9e-14 2_[+3]_68 chrVII:405269-405774 3.9e-14 14_[+3]_56 chrII:405615-406251 3.9e-14 10_[+3]_60 chrXIV:104580-105156 5.7e-14 3_[+3]_67 chrIV:434013-434554 5.7e-14 56_[-3]_14 chrII:266151-266729 5.7e-14 4_[+3]_66 chrXIII:480368-480908 3.8e-13 58_[-3]_12 chrXI:202820-203300 3.8e-13 5_[+3]_65 chrX:414792-415265 3.8e-13 4_[+3]_66 chrV:135170-135690 3.8e-13 70_[-3] chrIV:1201518-1202113 3.8e-13 1_[+3]_69 chrI:166051-166586 5.6e-12 15_[+3]_55 chrXVI:743999-744677 1.7e-10 11_[+3]_59 chrXII:975757-976255 2.7e-10 52_[-3]_18 chrVII:730948-731437 2.7e-10 12_[+3]_58 chrXVI:880041-880588 4.1e-10 57_[-3]_13 chrXII:734698-735006 4.1e-10 17_[+3]_53 chrII:197208-197886 4.1e-10 14_[+3]_56 chrXIII:586393-586918 5.7e-10 56_[-3]_14 chrXIII:372172-372730 5.7e-10 69_[-3]_1 chrVIII:85026-85582 5.7e-10 69_[-3]_1 chrXII:656701-657212 1.1e-09 53_[-3]_17 chrIV:410163-410716 1.1e-09 6_[+3]_64 chrXV:710013-710499 2.7e-09 10_[+3]_60 chrXVI:435614-436201 1.3e-08 61_[-3]_9 chrXIII:290448-291159 1.3e-08 64_[+3]_6 chrIX:370218-370619 1.3e-08 65_[+3]_5 chrV:288173-288751 1.9e-08 65_[-3]_5 chrII:326528-327098 1.9e-08 54_[-3]_16 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GKTARSGCGYCWSACTHNTAATSWGRAGRT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GKTARSGCGYCWSACTHNTAATSWGRAGRT width=30 seqs=30 chrX:374193-374833 ( 69) GGCAACGCGTCTGACTTCTAATCAGAAGAT 1 chrX:355130-355744 ( 3) GGCAACGCGTCTGACTTCTAATCAGAAGAT 1 chrVII:405269-405774 ( 15) GGCAACGCGTCTGACTTCTAATCAGAAGAT 1 chrII:405615-406251 ( 11) GGCAACGCGTCTGACTTCTAATCAGAAGAT 1 chrXIV:104580-105156 ( 4) GGTAAGGCGCCACACTAGTAATGTGGAGAT 1 chrIV:434013-434554 ( 57) GGTAAGGCGCCACACTAGTAATGTGGAGAT 1 chrII:266151-266729 ( 5) GGTAAGGCGCCACACTAGTAATGTGGAGAT 1 chrXIII:480368-480908 ( 59) GGTAGCGCGTATGACTCTTAATCATAAGGT 1 chrXI:202820-203300 ( 6) GGTAGCGCGTATGACTCTTAATCATAAGGT 1 chrX:414792-415265 ( 5) GGTAGCGCGTATGACTCTTAATCATAAGGT 1 chrV:135170-135690 ( 71) GGTAGCGCGTATGACTCTTAATCATAAGGT 1 chrIV:1201518-1202113 ( 2) GGTAGCGCGTATGACTCTTAATCATAAGGT 1 chrI:166051-166586 ( 16) GGTAGCGCGCTTCCCTTGCAAGGAAGAGGT 1 chrXVI:743999-744677 ( 12) GGTAGAGCGTTGCACTTGTAATGCAAAGGT 1 chrXII:975757-976255 ( 53) GTTAAGGCGTGCGACTGTTAATCGCAAGAT 1 chrVII:730948-731437 ( 13) GTTAAGGCGTGCGACTGTTAATCGCAAGAT 1 chrXVI:880041-880588 ( 58) GTTAAGGCACCGTGCTAATAACGCGGGGAT 1 chrXII:734698-735006 ( 18) GTTAAGGCACCGTGCTAATAACGCGGGGAT 1 chrII:197208-197886 ( 15) GTTAAGGCACCGTGCTAATAACGCGGGGAT 1 chrXIII:586393-586918 ( 57) GTTATGGCATCTGCTTAACACGCAGAACGT 1 chrXIII:372172-372730 ( 70) GTTATGGCATCTGCTTAACACGCAGAACGT 1 chrVIII:85026-85582 ( 70) GTTATGGCATCTGCTTAACACGCAGAACGT 1 chrXII:656701-657212 ( 54) GGTAGCGCGCTCCCTTAGCATGGGAGAGGT 1 chrIV:410163-410716 ( 7) GGTAGCGCGCTCCCTTAGCATGGGAGAGGT 1 chrXV:710013-710499 ( 11) GGAAGCGCGCAGGGCTCATAACCCTGATGT 1 chrXVI:435614-436201 ( 62) GGTAGCGCAGCAGATTGCAAATCTGTTGGT 1 chrXIII:290448-291159 ( 65) GCTATCACATCACGCTTTCACCGTGGAGAC 1 chrIX:370218-370619 ( 66) GCTATCACATCACGCTTTCACCGTGGAGAC 1 chrV:288173-288751 ( 66) GTTAAGGCGACAGACTTGAAATCTGTTGGG 1 chrII:326528-327098 ( 55) TTCAAGACGTCGCCTTTACACGGCGAAGAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GKTARSGCGYCWSACTHNTAATSWGRAGRT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 41890 bayes= 11.121 E= 6.2e-096 -1155 -1155 238 -323 -1155 -148 169 9 -323 -16 -1155 135 167 -1155 -1155 -1155 57 -1155 98 -91 -323 152 122 -1155 -165 -1155 228 -1155 -1155 243 -1155 -1155 -7 -1155 191 -1155 -323 84 -248 93 -65 169 -148 -124 -43 -48 11 46 -1155 84 161 -165 85 33 11 -1155 -1155 204 -1155 -43 -1155 -1155 -1155 167 22 11 -89 9 -24 -16 52 -7 -223 69 -1155 101 167 -1155 -1155 -1155 122 11 -1155 -223 -1155 11 33 85 -1155 161 122 -1155 46 11 -48 -43 -124 -148 169 -65 76 -1155 111 -223 141 -1155 -89 -223 -1155 -89 222 -323 67 -1155 143 -1155 -1155 -148 -248 152 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GKTARSGCGYCWSACTHNTAATSWGRAGRT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 30 E= 6.2e-096 0.000000 0.000000 0.966667 0.033333 0.000000 0.066667 0.600000 0.333333 0.033333 0.166667 0.000000 0.800000 1.000000 0.000000 0.000000 0.000000 0.466667 0.000000 0.366667 0.166667 0.033333 0.533333 0.433333 0.000000 0.100000 0.000000 0.900000 0.000000 0.000000 1.000000 0.000000 0.000000 0.300000 0.000000 0.700000 0.000000 0.033333 0.333333 0.033333 0.600000 0.200000 0.600000 0.066667 0.133333 0.233333 0.133333 0.200000 0.433333 0.000000 0.333333 0.566667 0.100000 0.566667 0.233333 0.200000 0.000000 0.000000 0.766667 0.000000 0.233333 0.000000 0.000000 0.000000 1.000000 0.366667 0.200000 0.100000 0.333333 0.266667 0.166667 0.266667 0.300000 0.066667 0.300000 0.000000 0.633333 1.000000 0.000000 0.000000 0.000000 0.733333 0.200000 0.000000 0.066667 0.000000 0.200000 0.233333 0.566667 0.000000 0.566667 0.433333 0.000000 0.433333 0.200000 0.133333 0.233333 0.133333 0.066667 0.600000 0.200000 0.533333 0.000000 0.400000 0.066667 0.833333 0.000000 0.100000 0.066667 0.000000 0.100000 0.866667 0.033333 0.500000 0.000000 0.500000 0.000000 0.000000 0.066667 0.033333 0.900000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GKTARSGCGYCWSACTHNTAATSWGRAGRT MEME-3 regular expression -------------------------------------------------------------------------------- G[GT]TA[AG][CG]GC[GA][TC][CA][TAG][GC][ACG][CT]T[ATC][TAG][TC]A[AC][TGC][CG][ATC][GT][AG]AG[AG]T -------------------------------------------------------------------------------- Time 935.80 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrI:5-1117 4.96e-03 30_[+2(1.31e-05)]_43 chrI:81860-82285 5.63e-01 100 chrI:138913-139348 5.31e-05 70_[+2(1.57e-08)]_3 chrI:141643-141885 9.82e-01 100 chrI:142115-143709 1.21e-01 100 chrI:166051-166586 9.25e-13 15_[+3(5.61e-12)]_[+1(2.30e-08)]_40 chrI:180923-181474 1.19e-02 80_[+1(2.42e-06)]_5 chrI:182347-182787 1.07e-15 15_[-1(1.40e-07)]_30_[-2(1.30e-11)]_\ 13 chrI:229153-230193 4.00e-03 22_[-2(1.31e-05)]_51 chrII:9363-9967 2.03e-04 25_[+1(3.67e-07)]_60 chrII:36163-36593 1.17e-05 68_[+2(2.59e-09)]_5 chrII:44959-45340 8.83e-01 100 chrII:59642-61275 7.69e-02 30_[-2(6.92e-05)]_43 chrII:87956-88590 9.23e-01 100 chrII:88937-89993 9.66e-01 100 chrII:159832-160019 3.96e-01 100 chrII:165095-165444 2.02e-01 100 chrII:167650-169695 1.34e-01 100 chrII:181319-181634 9.55e-01 100 chrII:197208-197886 1.41e-11 14_[+3(4.14e-10)]_[+1(9.08e-09)]_41 chrII:226864-227823 5.61e-01 100 chrII:255079-255796 4.94e-01 100 chrII:266151-266729 1.83e-13 4_[+3(5.65e-14)]_[+1(3.01e-07)]_51 chrII:301021-301592 9.27e-01 100 chrII:326528-327098 1.50e-08 39_[-1(1.56e-07)]_[-3(1.86e-08)]_16 chrII:332264-334258 9.22e-01 100 chrII:347404-347929 3.73e-05 4_[+3(3.55e-05)]_10_[+1(3.67e-07)]_\ 41 chrII:350567-351141 3.02e-09 21_[+2(3.95e-07)]_20_[+1(3.45e-09)]_\ 17 chrII:373531-375748 8.05e-02 100 chrII:405615-406251 1.13e-13 10_[+3(3.86e-14)]_[+1(2.67e-07)]_45 chrII:415507-415874 1.24e-01 100 chrII:477055-477766 4.11e-02 100 chrII:478968-479427 9.77e-01 100 chrII:504517-504699 3.68e-01 100 chrII:544569-544800 5.00e-01 100 chrII:592351-593508 1.36e-01 100 chrII:604090-607123 8.97e-01 100 chrII:642862-643348 5.59e-01 100 chrII:644951-645420 3.18e-12 30_[+2(3.51e-05)]_20_[+1(3.45e-09)]_\ 8 chrII:680410-682213 9.23e-01 100 chrII:812986-813182 4.85e-02 100 chrIII:4-1345 8.54e-01 100 chrIII:14115-16626 7.25e-01 100 chrIII:29898-31175 6.77e-01 100 chrIII:82354-82753 2.34e-02 4_[-2(3.51e-05)]_69 chrIII:107159-107796 9.11e-01 100 chrIII:123375-123819 3.57e-06 40_[-1(1.10e-09)]_45 chrIII:127527-127910 2.45e-11 65_[+3(2.70e-10)]_5 chrIII:141990-143007 4.83e-01 100 chrIII:162037-163147 8.82e-01 100 chrIII:163449-163887 6.19e-01 100 chrIII:168082-168618 4.37e-10 11_[-1(3.45e-09)]_20_[-2(4.90e-08)]_\ 27 chrIII:177086-178831 9.67e-01 100 chrIII:227717-228210 5.00e-10 27_[+2(2.94e-11)]_46 chrIII:262744-263034 5.86e-01 100 chrIII:293700-294378 6.79e-01 100 chrIII:294931-295920 4.54e-01 100 chrIII:315631-316618 4.12e-01 100 chrIV:27-359 2.39e-01 100 chrIV:83313-83817 6.89e-12 31_[+2(7.03e-09)]_19_[+1(5.71e-10)]_\ 8 chrIV:116775-118226 1.92e-01 100 chrIV:118437-118893 8.15e-01 100 chrIV:125309-125620 1.35e-01 67_[+1(5.60e-05)]_18 chrIV:129920-130992 2.31e-01 100 chrIV:217148-218060 8.74e-01 100 chrIV:221072-222337 8.03e-01 100 chrIV:229435-230565 9.10e-01 100 chrIV:308008-309892 1.48e-01 100 chrIV:321625-321959 5.65e-01 100 chrIV:322203-323623 8.59e-01 100 chrIV:340166-341658 8.09e-01 100 chrIV:358051-358446 6.41e-01 100 chrIV:359363-359824 3.06e-08 32_[+2(1.51e-09)]_41 chrIV:410163-410716 6.22e-10 6_[+3(1.07e-09)]_[+1(8.48e-08)]_49 chrIV:411254-411661 8.02e-02 100 chrIV:427693-428691 5.26e-01 100 chrIV:434013-434554 1.83e-13 41_[-1(3.01e-07)]_[-3(5.65e-14)]_14 chrIV:437538-438076 7.08e-16 13_[+2(8.39e-12)]_30_[+1(1.40e-07)]_\ 15 chrIV:448904-450066 4.81e-01 100 chrIV:465252-465566 2.58e-01 100 chrIV:488433-489162 5.93e-04 60_[-1(1.56e-07)]_25 chrIV:490472-491284 6.68e-01 100 chrIV:491485-492633 1.16e-01 100 chrIV:519550-519949 5.93e-07 42_[+2(1.12e-08)]_31 chrIV:520698-521386 6.62e-05 25_[+1(3.45e-09)]_60 chrIV:538981-539209 8.93e-02 100 chrIV:541264-541884 9.19e-01 100 chrIV:568675-569335 3.51e-07 7_[+2(7.16e-07)]_20_[+1(1.98e-07)]_\ 31 chrIV:579013-580787 1.46e-01 100 chrIV:619679-620248 5.27e-03 66_[-1(1.36e-06)]_19 chrIV:644977-645399 5.71e-10 25_[-1(3.45e-09)]_20_[-2(6.53e-08)]_\ 13 chrIV:667759-668255 8.93e-05 60_[-1(9.08e-09)]_25 chrIV:802536-803010 5.71e-10 18_[-1(3.45e-09)]_20_[-2(6.53e-08)]_\ 20 chrIV:835760-836251 3.51e-01 100 chrIV:884187-884652 2.89e-01 100 chrIV:946134-946629 1.40e-04 43_[+1(3.93e-06)]_42 chrIV:980757-981263 7.08e-16 24_[-1(1.40e-07)]_30_[-2(8.39e-12)]_\ 4 chrIV:992614-993186 1.87e-06 26_[+1(5.71e-10)]_59 chrIV:1012628-1013947 9.98e-01 100 chrIV:1016962-1017517 6.09e-12 28_[-1(3.45e-09)]_20_[-2(2.87e-05)]_\ 10 chrIV:1062756-1063092 8.75e-01 100 chrIV:1075292-1075756 2.63e-11 8_[-1(7.52e-08)]_[-3(2.42e-08)]_47 chrIV:1095025-1095675 1.04e-02 80_[-1(4.14e-06)]_5 chrIV:1150329-1151201 9.71e-01 100 chrIV:1175582-1176070 3.59e-09 51_[+2(2.96e-08)]_22 chrIV:1201518-1202113 4.03e-14 1_[+3(3.83e-13)]_[+1(1.56e-07)]_54 chrIV:1233664-1234108 8.03e-01 100 chrIV:1236530-1238675 9.86e-01 100 chrIV:1256867-1257292 1.54e-06 24_[-2(8.65e-08)]_49 chrIV:1300232-1301347 7.76e-01 100 chrIV:1301905-1302562 3.00e-01 100 chrIV:1305377-1306057 4.47e-04 19_[+1(1.40e-07)]_66 chrIV:1352297-1352886 9.98e-01 100 chrIV:1355716-1356038 7.73e-01 100 chrIV:1359166-1361220 3.82e-01 100 chrIV:1401230-1401956 3.94e-02 100 chrIV:1402428-1403474 3.07e-01 100 chrIV:1449897-1451242 4.69e-01 100 chrIV:1461481-1462061 5.19e-03 4_[-1(2.42e-06)]_81 chrIV:1524130-1525664 9.65e-03 10_[-2(1.31e-05)]_63 chrIX:1-251 8.70e-01 100 chrIX:68199-69584 8.06e-01 100 chrIX:98525-100035 7.55e-01 100 chrIX:174829-175261 4.07e-20 52_[+3(5.65e-14)]_[+1(3.01e-07)]_3 chrIX:182929-183728 8.78e-01 100 chrIX:197355-197997 5.52e-05 11_[+1(3.45e-09)]_74 chrIX:210511-210970 6.43e-05 22_[+1(9.08e-09)]_63 chrIX:248623-249327 9.50e-01 100 chrIX:254228-254551 2.17e-01 100 chrIX:257354-258116 2.48e-01 100 chrIX:299989-300751 9.34e-01 100 chrIX:316108-318187 9.58e-01 100 chrIX:324151-324604 1.48e-03 21_[-2(7.16e-07)]_52 chrIX:325501-326141 9.56e-04 23_[+1(3.01e-07)]_62 chrIX:336120-336654 3.40e-07 22_[-1(1.98e-07)]_20_[-2(6.20e-07)]_\ 16 chrIX:370218-370619 8.58e-07 65_[+3(1.27e-08)]_5 chrIX:438636-439885 4.72e-01 100 chrM:58272-58710 9.45e-01 100 chrV:6152-6813 4.07e-02 100 chrV:13321-13524 7.61e-01 100 chrV:51862-52864 6.47e-01 100 chrV:53525-54204 5.53e-01 100 chrV:61022-62160 6.09e-01 100 chrV:68744-69333 7.93e-01 100 chrV:78067-79479 4.98e-01 100 chrV:85122-85456 3.22e-01 100 chrV:85846-86885 9.20e-01 100 chrV:99788-100335 9.32e-01 100 chrV:110352-111057 7.31e-01 100 chrV:117639-118310 8.54e-01 100 chrV:130836-131415 9.10e-10 17_[-1(3.45e-09)]_20_[-2(7.88e-08)]_\ 21 chrV:135170-135690 5.17e-13 55_[-1(1.56e-07)]_[-3(3.83e-13)] chrV:138434-140892 5.04e-01 100 chrV:176862-177467 3.42e-10 30_[+1(3.45e-09)]_55 chrV:207114-207887 9.86e-01 100 chrV:250101-250526 4.37e-10 21_[+2(4.90e-08)]_20_[+1(3.45e-09)]_\ 17 chrV:269211-270679 9.94e-01 100 chrV:288173-288751 2.26e-08 41_[-1(8.61e-07)]_9_[-3(1.86e-08)]_\ 5 chrV:302799-303386 5.95e-01 100 chrV:303980-306922 9.67e-01 100 chrV:311761-312294 1.85e-05 56_[-1(2.30e-08)]_29 chrV:321928-323042 8.54e-01 100 chrV:354696-355398 5.07e-01 100 chrV:361979-362493 9.30e-01 100 chrV:363592-364121 7.08e-01 100 chrV:396160-397997 7.46e-01 100 chrV:406558-408314 2.63e-01 100 chrV:408521-409333 3.46e-01 100 chrV:423081-424354 9.45e-01 100 chrV:424611-425286 9.40e-01 100 chrV:430981-431556 2.40e-02 27_[-1(7.63e-05)]_58 chrV:434376-434784 9.00e-08 21_[-1(2.23e-07)]_20_[-2(6.20e-07)]_\ 17 chrV:435627-436018 2.10e-15 5_[-3(3.83e-13)]_65 chrV:438269-438999 5.41e-01 100 chrV:441801-442651 7.84e-01 100 chrV:443016-443477 1.49e-18 16_[-1(9.08e-09)]_22_[-2(9.06e-11)]_\ 20 chrV:469225-469660 6.22e-06 63_[+2(3.81e-09)]_10 chrV:487085-487648 3.18e-12 25_[-1(3.45e-09)]_20_[-2(3.51e-05)]_\ 13 chrV:492200-492579 1.34e-10 23_[-1(1.36e-06)]_21_[-2(1.48e-07)]_\ 14 chrV:504553-505267 3.60e-01 100 chrV:522770-522953 2.56e-02 20_[+3(1.78e-05)]_50 chrV:551034-551587 1.05e-18 35_[-1(9.08e-09)]_22_[-2(6.31e-11)]_\ 1 chrVI:4471-5435 3.74e-01 100 chrVI:63924-65393 7.66e-01 100 chrVI:82538-84559 3.72e-01 100 chrVI:95474-95859 2.05e-01 100 chrVI:101062-101681 4.79e-05 53_[+2(1.57e-08)]_20 chrVI:137243-137898 1.22e-04 13_[-2(1.12e-08)]_60 chrVI:157632-158506 9.91e-01 100 chrVI:162011-162421 5.42e-05 60_[+2(7.03e-09)]_13 chrVI:167244-167688 1.90e-05 19_[+2(5.29e-06)]_37_[+1(3.93e-06)]_\ 2 chrVI:180660-181261 1.04e-05 74_[-1(5.71e-10)]_11 chrVI:191047-191814 2.29e-01 100 chrVI:204783-205215 1.47e-14 21_[-2(1.30e-11)]_52 chrVI:210439-210929 7.70e-03 47_[-2(5.29e-06)]_26 chrVI:221732-222063 6.69e-01 100 chrVI:223243-224156 4.42e-01 100 chrVI:226557-226951 2.81e-15 9_[-3(3.83e-13)]_61 chrVI:269291-270159 9.81e-01 100 chrVII:17-1197 9.66e-01 100 chrVII:73649-74239 9.02e-04 43_[+2(6.20e-07)]_30 chrVII:110397-110929 1.57e-07 22_[-1(2.23e-07)]_20_[-2(4.96e-07)]_\ 16 chrVII:115260-115771 3.06e-08 21_[+2(1.51e-09)]_52 chrVII:121978-122643 1.18e-19 25_[+3(3.83e-13)]_[+1(1.56e-07)]_30 chrVII:148091-149538 7.88e-01 100 chrVII:185200-186034 3.20e-01 100 chrVII:205296-205915 9.30e-03 53_[+1(2.42e-06)]_32 chrVII:254121-254727 4.55e-01 100 chrVII:255197-255603 8.99e-01 100 chrVII:276926-277419 9.71e-02 100 chrVII:277671-278689 3.69e-02 100 chrVII:287023-287850 1.13e-02 43_[-2(1.96e-05)]_30 chrVII:291623-292244 5.00e-02 100 chrVII:310481-312334 5.78e-01 100 chrVII:316764-317376 9.99e-01 100 chrVII:319586-320155 5.05e-04 6_[+1(2.23e-07)]_79 chrVII:328377-329071 6.51e-01 100 chrVII:345886-346673 3.56e-01 100 chrVII:364072-364438 9.95e-01 100 chrVII:364884-366737 5.78e-01 100 chrVII:371224-371484 4.94e-01 100 chrVII:400741-401778 6.09e-01 100 chrVII:405269-405774 1.13e-13 14_[+3(3.86e-14)]_[+1(2.67e-07)]_41 chrVII:412112-412589 8.11e-16 4_[-1(1.13e-07)]_[-3(5.75e-10)]_51 chrVII:422874-423492 1.01e-02 46_[+1(2.42e-06)]_39 chrVII:438583-439924 9.86e-01 100 chrVII:440311-442072 1.76e-01 100 chrVII:442772-442991 5.41e-01 100 chrVII:479159-482773 8.02e-02 100 chrVII:483450-483667 9.43e-01 100 chrVII:531434-531809 3.88e-07 37_[+2(7.16e-07)]_20_[+1(1.98e-07)]_\ 1 chrVII:533495-535223 9.94e-01 100 chrVII:541629-542188 2.65e-10 37_[+1(3.45e-09)]_48 chrVII:544390-546123 7.24e-01 100 chrVII:555144-557500 6.41e-01 100 chrVII:561294-561950 5.98e-01 100 chrVII:609320-609915 8.56e-01 100 chrVII:648120-648472 5.32e-01 100 chrVII:648784-649391 3.63e-01 100 chrVII:661524-661951 3.66e-04 60_[+2(2.26e-07)]_13 chrVII:700215-701263 3.15e-04 41_[+1(6.58e-08)]_44 chrVII:706920-707350 5.64e-11 33_[-1(1.70e-06)]_[-3(1.27e-08)]_22 chrVII:726395-728200 9.94e-01 100 chrVII:730948-731437 1.42e-09 12_[+3(2.70e-10)]_[+1(2.27e-06)]_43 chrVII:736170-736546 8.36e-17 47_[+3(3.86e-14)]_[+1(2.67e-07)]_8 chrVII:738783-739404 5.58e-01 100 chrVII:774114-774619 2.61e-18 31_[+2(6.71e-12)]_21_[+1(8.48e-08)]_\ 6 chrVII:779391-779935 2.92e-11 1_[+2(4.44e-08)]_20_[+1(3.26e-08)]_\ 37 chrVII:788313-788766 8.54e-01 100 chrVII:794155-794592 7.66e-01 100 chrVII:823265-823709 1.03e-11 62_[+3(5.75e-10)]_8 chrVII:828435-828982 1.02e-03 75_[-1(2.67e-07)]_10 chrVII:845244-845915 6.16e-01 100 chrVII:856765-856973 3.45e-01 100 chrVII:857237-857684 1.38e-04 55_[-2(1.57e-08)]_18 chrVII:876033-876766 2.10e-15 61_[+3(3.83e-13)]_9 chrVII:878586-879075 4.58e-03 9_[-2(1.96e-05)]_64 chrVII:882093-883865 6.84e-01 100 chrVII:914902-915217 7.64e-01 100 chrVII:919995-920207 8.41e-01 100 chrVII:930744-931214 6.89e-12 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46_[-1(1.70e-06)]_[-3(1.27e-08)]_9 chrXVI:520138-520529 9.83e-02 100 chrXVI:559987-560506 2.71e-08 12_[-1(4.14e-06)]_40_[-2(2.59e-09)]_\ 6 chrXVI:571959-572569 2.15e-06 53_[+2(1.25e-08)]_20 chrXVI:581826-582317 2.03e-15 57_[+3(3.83e-13)]_13 chrXVI:622328-622844 3.43e-08 14_[-1(4.14e-06)]_40_[-2(3.36e-09)]_\ 4 chrXVI:653813-655025 7.84e-01 100 chrXVI:689351-689876 2.43e-14 [+2(5.51e-10)]_30_[+1(8.61e-07)]_28 chrXVI:699899-700700 9.00e-01 100 chrXVI:701869-702348 2.78e-01 100 chrXVI:718433-719481 5.21e-01 100 chrXVI:731657-732314 3.60e-01 100 chrXVI:743999-744677 8.65e-10 11_[+3(1.72e-10)]_[+1(6.54e-06)]_44 chrXVI:768623-768820 5.76e-01 100 chrXVI:769026-769502 1.72e-13 3_[-1(1.22e-08)]_44_[-2(1.51e-09)]_\ 11 chrXVI:775652-776202 9.75e-01 100 chrXVI:794451-796084 9.24e-01 100 chrXVI:810472-810863 1.77e-04 57_[+2(1.57e-08)]_16 chrXVI:819326-819900 1.07e-05 13_[+1(9.08e-09)]_72 chrXVI:821663-822107 7.08e-01 100 chrXVI:856744-857098 4.90e-18 29_[+2(1.30e-11)]_21_[+1(8.48e-08)]_\ 8 chrXVI:860125-860655 6.89e-12 37_[+2(7.03e-09)]_19_[+1(5.71e-10)]_\ 2 chrXVI:880041-880588 1.41e-11 42_[-1(9.08e-09)]_[-3(4.14e-10)]_13 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************