******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--PDR8/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrI:5-1113 1.0000 100 chrI:81882-82288 1.0000 100 chrI:138890-139383 1.0000 100 chrI:142063-143688 1.0000 100 chrI:166024-166629 1.0000 100 chrI:180939-181525 1.0000 100 chrI:182341-182782 1.0000 100 chrI:229147-230194 1.0000 100 chrII:9341-9919 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100 chrXV:438402-439003 1.0000 100 chrXV:444660-446264 1.0000 100 chrXV:446579-447085 1.0000 100 chrXV:464211-464752 1.0000 100 chrXV:487209-487718 1.0000 100 chrXV:504883-505516 1.0000 100 chrXV:558700-559018 1.0000 100 chrXV:571553-572244 1.0000 100 chrXV:594050-594683 1.0000 100 chrXV:663492-664476 1.0000 100 chrXV:677983-679237 1.0000 100 chrXV:709971-710494 1.0000 100 chrXV:759091-759639 1.0000 100 chrXV:778618-779485 1.0000 100 chrXV:779689-780876 1.0000 100 chrXV:832473-832762 1.0000 100 chrXV:853998-854441 1.0000 100 chrXV:866522-868066 1.0000 100 chrXV:882152-882389 1.0000 100 chrXV:900103-901683 1.0000 100 chrXV:925208-925433 1.0000 100 chrXV:968059-968431 1.0000 100 chrXV:970988-971165 1.0000 100 chrXV:976173-976725 1.0000 100 chrXV:978812-979140 1.0000 100 chrXV:980480-981251 1.0000 100 chrXV:1003810-1004674 1.0000 100 chrXV:1025336-1026134 1.0000 100 chrXV:1027824-1029159 1.0000 100 chrXV:1091125-1091290 1.0000 100 chrXVI:55836-56523 1.0000 100 chrXVI:76146-76738 1.0000 100 chrXVI:135434-135843 1.0000 100 chrXVI:172813-174095 1.0000 100 chrXVI:188594-189026 1.0000 100 chrXVI:209955-210590 1.0000 100 chrXVI:280682-282785 1.0000 100 chrXVI:302545-303059 1.0000 100 chrXVI:338686-339150 1.0000 100 chrXVI:340562-340785 1.0000 100 chrXVI:377866-379030 1.0000 100 chrXVI:406176-407943 1.0000 100 chrXVI:435224-436208 1.0000 100 chrXVI:520135-520582 1.0000 100 chrXVI:559961-560528 1.0000 100 chrXVI:572020-572628 1.0000 100 chrXVI:581845-582415 1.0000 100 chrXVI:622262-622872 1.0000 100 chrXVI:653806-654704 1.0000 100 chrXVI:688873-689914 1.0000 100 chrXVI:699905-700700 1.0000 100 chrXVI:701854-702394 1.0000 100 chrXVI:718482-719391 1.0000 100 chrXVI:731886-732361 1.0000 100 chrXVI:743794-744797 1.0000 100 chrXVI:768922-769505 1.0000 100 chrXVI:775649-776192 1.0000 100 chrXVI:794409-796100 1.0000 100 chrXVI:810440-811040 1.0000 100 chrXVI:819273-819992 1.0000 100 chrXVI:856748-857160 1.0000 100 chrXVI:860116-860670 1.0000 100 chrXVI:866438-866750 1.0000 100 chrXVI:880024-880586 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--PDR8/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--PDR8/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--PDR8/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 583 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 58300 N= 583 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.302 C 0.198 G 0.198 T 0.302 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--PDR8/background): A 0.317 C 0.183 G 0.183 T 0.317 ******************************************************************************** ******************************************************************************** MOTIF RRGRTCVBSGGTTCGAWYCCS MEME-1 width = 21 sites = 125 llr = 2038 E-value = 2.6e-413 ******************************************************************************** -------------------------------------------------------------------------------- Motif RRGRTCVBSGGTTCGAWYCCS MEME-1 Description -------------------------------------------------------------------------------- Simplified A 46232:3112::::2a2:::: pos.-specific C :12118443::::a::24a75 probability G 53652:3357a:::8:2:::3 matrix T 1::162:21::aa:::46:21 bits 2.5 * * * 2.2 * * * 2.0 * * * 1.7 * **** * * Relative 1.5 * ****** * Entropy 1.2 * ****** * (23.5 bits) 1.0 * ******* *** 0.7 ** * ******** **** 0.5 **** *********** **** 0.2 **************** **** 0.0 --------------------- Multilevel GAGGTCCCGGGTTCGATTCCC consensus AGAA AGCA A AC TG sequence GT C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRGRTCVBSGGTTCGAWYCCS MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXIV:631494-632162 - 78 2.80e-13 GG GAGGTCCCGGGTTCGAGTCCC GGCTCGCCCC chrIII:123363-123838 - 37 2.80e-13 TAGGGTGCGG GAGGTCCCGGGTTCGAGTCCC GGCTCGCCCC chrXV:853998-854441 - 28 4.95e-11 TTGCAAGGAA GAGGTCATCGGTTCGATTCCG GTTGCGTCCA chrXII:214664-215184 - 19 4.95e-11 TTGCAAGGAA GAGGTCATCGGTTCGATTCCG GTTGCGTCCA chrV:311759-312324 - 42 4.95e-11 TTGCAAGGAA GAGGTCATCGGTTCGATTCCG GTTGCGTCCA chrI:166024-166629 + 33 4.95e-11 TTGCAAGGAA GAGGTCATCGGTTCGATTCCG GTTGCGTCCA chrXVI:880024-880586 - 51 5.96e-11 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGACCA chrXIV:602099-602598 + 57 5.96e-11 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGACCA chrXIV:569594-570166 - 47 5.96e-11 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGACCA chrXII:1051821-1052371 - 35 5.96e-11 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGACCA chrXII:734689-735032 + 35 5.96e-11 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGACCA chrVII:738872-739419 + 70 5.96e-11 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGACCA chrIX:210485-210964 + 34 5.96e-11 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGACCA chrIV:667738-668264 - 66 5.96e-11 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGACCA chrII:197210-197873 + 46 5.96e-11 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGACCA chrXIII:290548-291167 + 35 1.04e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTAGCGGAG chrVII:541610-542194 + 39 1.04e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTATCGGAG chrVII:401327-401778 - 35 1.04e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTATCGGAG chrVII:328355-328969 + 12 1.04e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTATCGGAG chrV:486878-487753 - 76 1.04e-10 CCGT GGAGACCGGGGTTCGACTCCC CGTATCGGAG chrV:176780-177454 + 73 1.04e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTATCG chrIX:370211-370647 + 79 1.04e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC C chrIV:1016952-1017536 - 23 1.04e-10 TTCTCACCGT GGAGACCGGGGTTCGACTCCC CGCTTCGGAG chrIII:82236-82748 - 30 1.04e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTATCGGAG chrII:644951-645478 + 44 1.04e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTATCGGAG chrVII:779342-779945 + 64 2.09e-10 CTTCCAAGGT GGGGACACGGGTTCGATTCTC GTACCGCTCA chrXVI:856748-857160 + 40 3.41e-10 TAGCATGGGA GAGGTCTCCGGTTCGATTCCG GACTCGTCCA chrXIII:320925-321339 - 75 3.41e-10 TGGGA GAGGTCTCCGGTTCGATTCCG GACTCGTCCA chrXII:656686-657214 - 44 3.41e-10 TAGCATGGGA GAGGTCTCCGGTTCGATTCCG GACTCGTCCA chrIV:410140-410721 + 41 3.41e-10 TAGCATGGGA GAGGTCTCCGGTTCGATTCCG GACTCGTCCA chrXVI:581845-582415 + 24 3.99e-10 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrXIII:480368-480934 - 30 3.99e-10 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrXI:202822-203294 + 33 3.99e-10 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrX:414690-415313 + 57 3.99e-10 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrVII:876151-876743 + 39 3.99e-10 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrVII:121978-122692 + 26 3.99e-10 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrV:135159-135728 - 42 3.99e-10 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrXIV:546922-547433 + 39 9.92e-10 AAGCATGCGA GAGGCCCTGGGTTCAATTCCC AGCTCGCCCC chrXII:92265-92960 + 58 9.92e-10 AAGCATGCGA GAGGCCCTGGGTTCAATTCCC AGCTCGCCCC chrXV:594050-594683 - 48 1.32e-09 TTCCCAAGCA TGAGGCCCGGGTTCGATTCCC GGCTTGCGCA chrVII:700196-701274 + 41 1.52e-09 TGATCTCTTC GGAGGCGCGGGTTCAAACCCC GCGGGTATCA chrXVI:768922-769505 - 54 1.74e-09 AGGATACCGA AATGTCAGGGGTTCGAGCCCC CTATGAGGAG chrXV:438402-439003 + 56 1.74e-09 AGGATACCGA AATGTCAGGGGTTCGAGCCCC CTATGAGGAG chrXII:875229-875683 + 35 1.74e-09 AGGATACCGA AATGTCAGGGGTTCGAGCCCC CTATGAGGAG chrXI:578780-579375 + 3 1.74e-09 GA AATGTCAGGGGTTCGAGCCCC CTATGAGGAG chrIV:359354-359886 + 72 1.74e-09 AGGATACCGA AATGTCAGGGGTTCGAGCCCC CTATGAGG chrIV:644919-645409 - 49 2.00e-09 TTTTGATCCG GACAACCCCGGTTCGAATCCG GGTAGGACCT chrIII:168073-168633 - 8 2.00e-09 TTTTGATCCG GACAACCCCGGTTCGAATCCG GGTAGGA chrII:350586-351127 + 62 2.00e-09 TTTTGATCCG GACAACCCCGGTTCGAATCCG GGTAAGACCT chrXVI:860116-860670 + 76 2.29e-09 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGCT chrXVI:572020-572628 + 35 2.29e-09 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrXV:281911-282535 + 31 2.29e-09 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrX:531479-532220 + 69 2.29e-09 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrVII:930737-931242 - 24 2.29e-09 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrX:374187-374836 - 55 3.40e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrX:355119-355739 + 36 3.40e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrVII:405264-405806 + 26 3.40e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrII:405549-406260 + 65 3.40e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrIV:488463-489161 - 45 3.86e-09 TTACACGGCG AAGATCCCGAGTTCGAACCTC GGTTGGATCA chrXV:113577-114140 + 36 5.62e-09 TAGTAATGTG GAGATCATCGGTTCAAATCCG ATTGGAAGCA chrX:58647-59601 - 36 5.62e-09 TAGTAATGTG GAGATCATCGGTTCAAATCCG ATTGGAAGCA chrV:130834-131417 - 17 5.62e-09 TTTTGATCCG AACAACCCCGGTTCGAATCCG GGTAAGACCT chrIX:325394-326141 + 73 5.62e-09 TAGTAATGTG GAGATCATCGGTTCAAATCCG ATTGGAA chrIX:174795-175390 + 31 5.62e-09 TAGTAATGTG GAGATCATCGGTTCAAATCCG ATTGGAAGCA chrIV:433981-434605 - 31 5.62e-09 TAGTAATGTG GAGATCATCGGTTCAAATCCG ATTGGAAGCA chrII:266131-266699 + 55 5.62e-09 TAGTAATGTG GAGATCATCGGTTCAAATCCG ATTGGAAGCA chrXIII:586404-586923 - 33 7.16e-09 TAACACGCAG AACGTCCCCAGTTCGATCCTG GGCGAAATCA chrXIII:372158-372736 - 58 7.16e-09 TAACACGCAG AACGTCCCCAGTTCGATCCTG GGCGAAATCA chrXII:687623-688179 - 18 7.16e-09 TAACACGCAG AACGTCCCCAGTTCGATCCTG GGCGAAATCA chrXI:379454-380017 + 38 7.16e-09 TAACACGCAG AACGTCCCCAGTTCGATCCTG GGCGAAATCA chrVIII:85096-85582 - 19 7.16e-09 TAACACGCAG AACGTCCCCAGTTCGATCCTG GGCGAAATCA chrXVI:622262-622872 - 33 1.60e-08 AAGTTATCTG GAGGTCCTGTGTTCGATCCAC AGAATTCGCA chrXVI:559961-560528 - 14 1.60e-08 AAGTTATCTG GAGGTCCTGTGTTCGATCCAC AGAATTCGCA chrXIV:374645-375298 + 8 1.60e-08 TCATCTG GAGGTCCTGTGTTCGATCCAC AGAGTTCGCA chrVIII:237615-238152 - 25 1.60e-08 AAGTTATCTG GAGGTCCTGTGTTCGATCCAC AGAATTCGCA chrVI:157658-158226 - 34 1.60e-08 AAGTTATCTG GAGGTCCTGTGTTCGATCCAC AGAATTCGCA chrIV:1095097-1095715 - 24 1.60e-08 AAGATATCTG GAGGTCCTGTGTTCGATCCAC AGAGTTCGCA chrXV:976173-976725 + 64 2.00e-08 TCATAATCTG AAGGTCGAGAGTTCGAACCTC CCCTGGAGCA chrX:422576-423357 + 63 2.00e-08 TCATAATCTG AAGGTCGAGAGTTCGAACCTC CCCTGGAGCA chrX:390866-391309 - 16 2.00e-08 TCATAATCTG AAGGTCGAGAGTTCGAACCTC CCCTGGAGCA chrXIII:837668-838297 + 54 2.22e-08 ACGAAATCTT GAGATCGGGCGTTCGACTCGC CCCCGGGAGA chrX:353992-354610 + 51 2.22e-08 ACGAAATCTT GAGATCGGGCGTTCGACTCGC CCCCGGGAGA chrVI:210445-210905 - 4 2.22e-08 ACGAAATCTT GAGATCGGGCGTTCGACTCGC CCC chrVI:167256-167689 + 73 2.22e-08 ACGAAATCTT GAGATCGGGCGTTCGACTCGC CCCCGGG chrIV:946137-946618 + 43 2.22e-08 ACGAAATCTT GAGATCGGGCGTTCGACTCGC CCCCGGGAGA chrXVI:810440-811040 + 29 5.02e-08 TGTTAATCGC AAGATCGTGAGTTCAACCCTC ACTGGGGTCG chrXV:487209-487718 + 69 5.02e-08 TGTTAATCGC AAGATCGTGAGTTCAACCCTC ACTGGGGTCG chrXIV:632393-632932 + 30 5.02e-08 TGTTAATCGC AAGATCGTGAGTTCAACCCTC ACTGGGGTCG chrXII:975676-976276 - 67 5.02e-08 TGTTAATCGC AAGATCGTGAGTTCAACCCTC ACTGGGGTCG chrXI:74408-74992 + 17 5.02e-08 TGTTAATCGC AAGATCGTGAGTTCAACCCTC ACTGGGGTCG chrVII:730914-731449 + 49 5.02e-08 TGTTAATCGC AAGATCGTGAGTTCAACCCTC ACTGGGGTCG chrX:617743-618192 + 72 8.07e-08 TGATATCTTC GGATGCAAGGGTTCGAATCCC TTAGCTCT chrXVI:55836-56523 - 50 1.26e-07 TTGCAATCGA AGGGTTGCAGGTTCAATTCCT GTCCGTTTCA chrXIII:378922-379646 - 79 1.26e-07 A AGGGTTGCAGGTTCAATTCCT GTCCGTTTCA chrXI:302668-303273 + 73 1.26e-07 TTGCAATCGA AGGGTTGCAGGTTCAATTCCT GTCCGTT chrVII:287079-287668 - 37 1.26e-07 TTGCAATCGA AGGGTTGCAGGTTCAATTCCT GTCCGTTTCA chrVIII:466747-467365 + 25 1.38e-07 TTGTAATGCA AAGGTCGCTAGTTCAATTCTG GCAGGTGGCA chrXVI:743794-744797 + 80 2.66e-07 TTGTAATGCA AAGGTCGTTAGTTCAATTCTG chrX:523843-524298 - 2 2.88e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT G chrVIII:132801-133352 - 10 2.88e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT GCAGTTGTC chrV:492145-492575 - 52 2.88e-07 TACGAACCAG AAGATTCCAGGTTCAAGTCCT GGCGGGGAAG chrIV:980713-981278 - 39 2.88e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT GCAGTTGTCG chrIV:619685-620349 - 12 2.88e-07 TACGAACCAG AAGATTCCAGGTTCAAGTCCT GGCGGGGAAG chrI:182341-182782 - 21 2.88e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT GCAGTTGTCG chrXIII:463248-463917 + 63 3.62e-07 TTGTCGCGTG CCAGATCGGGGTTCAATTCCC CGTCGCGGAG chrXII:426899-427474 + 37 3.62e-07 TTGTCGCGTG CCAGATCGGGGTTCAATTCCC CGTCGCGGAG chrX:541303-541760 + 68 3.62e-07 TTGTCGCGTG CCAGATCGGGGTTCAATTCCC CGTCGCGGAG chrIX:323957-324628 - 71 3.62e-07 TGTCGCGTG CCAGATCGGGGTTCAATTCCC CGTCGCGGAG chrXII:962693-963343 - 14 4.86e-07 TTGGACGGTT GTCCGCGCGAGTTCGAACCTC GCATCCTTCA chrII:347398-347937 + 39 4.86e-07 TTGGACGGTT GTCCGCGCGAGTTCGAACCTC GCATCCTTCA chrII:9341-9919 + 56 4.86e-07 TTGGACGGTT GTCCGCGCGAGTTCGAACCTC GCATCCTTCA chrXV:274482-275025 + 40 8.41e-07 ATTGGGTTTT ACCTGCGCAGGTTCGAATCCT GTCTGTGACG chrVI:191300-191818 - 14 8.41e-07 ATTGGGTTTT ACCTGCGCAGGTTCGAATCCT GTCTGTGACG chrIV:1150547-1151173 - 42 8.41e-07 ATTGGGTTTT ACCTGCGCAGGTTCGAATCCT GTCTGTGACG chrVII:706935-707357 - 22 9.57e-07 TGCAAATCTG TTGGTCCTTAGTTCGATCCTG AGTGCGAGCT chrXII:628152-628874 + 4 1.39e-06 GTA AGATGCAAGAGTTCGAATCTC TTAGCAACCA chrXI:458224-459027 + 65 1.39e-06 AGGTATCGTA AGATGCAAGAGTTCGAATCTC TTAGCAACCA chrVII:422878-423504 + 34 1.39e-06 AGGTATCGTA AGATGCAAGAGTTCGAATCTC TTAGCAACCA chrV:288123-288762 - 61 1.39e-06 GTTGGGCTCT GCCCGCGCTGGTTCAAATCCT GCTGGTGTCG chrI:180939-181525 + 42 1.39e-06 AGGTATCGTA AGATGCAAGAGTTCGAATCTC TTAGCAACCA chrXIII:362841-363345 + 62 2.07e-06 TTGTGGCCGA TGAAACCCTGGTTCGATTCTA GGAGATGGCA chrXI:313169-313721 - 16 2.07e-06 TTGTGGCCGA TGAAACCCTGGTTCGATTCTA GGAGATGGCA chrVIII:62529-63013 + 75 2.07e-06 TTGTGGCCGA TGAAACCCTGGTTCGATTCTA GGAGA chrVII:110387-110970 - 7 2.07e-06 TTGTGGCCGA TGAAACCCTGGTTCGATTCTA GGAGAT chrXII:366002-366953 - 39 3.14e-06 AACCGATAGC AAAGGCTTAGGTTCGAACGCG AGACAATTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRGRTCVBSGGTTCGAWYCCS MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:631494-632162 2.8e-13 77_[-1]_2 chrIII:123363-123838 2.8e-13 36_[-1]_43 chrXV:853998-854441 4.9e-11 27_[-1]_52 chrXII:214664-215184 4.9e-11 18_[-1]_61 chrV:311759-312324 4.9e-11 41_[-1]_38 chrI:166024-166629 4.9e-11 32_[+1]_47 chrXVI:880024-880586 6e-11 50_[-1]_29 chrXIV:602099-602598 6e-11 56_[+1]_23 chrXIV:569594-570166 6e-11 46_[-1]_33 chrXII:1051821-1052371 6e-11 34_[-1]_45 chrXII:734689-735032 6e-11 34_[+1]_45 chrVII:738872-739419 6e-11 69_[+1]_10 chrIX:210485-210964 6e-11 33_[+1]_46 chrIV:667738-668264 6e-11 65_[-1]_14 chrII:197210-197873 6e-11 45_[+1]_34 chrXIII:290548-291167 1e-10 34_[+1]_45 chrVII:541610-542194 1e-10 38_[+1]_41 chrVII:401327-401778 1e-10 34_[-1]_45 chrVII:328355-328969 1e-10 11_[+1]_68 chrV:486878-487753 1e-10 75_[-1]_4 chrV:176780-177454 1e-10 72_[+1]_7 chrIX:370211-370647 1e-10 78_[+1]_1 chrIV:1016952-1017536 1e-10 22_[-1]_57 chrIII:82236-82748 1e-10 29_[-1]_50 chrII:644951-645478 1e-10 43_[+1]_36 chrVII:779342-779945 2.1e-10 63_[+1]_16 chrXVI:856748-857160 3.4e-10 39_[+1]_40 chrXIII:320925-321339 3.4e-10 74_[-1]_5 chrXII:656686-657214 3.4e-10 43_[-1]_36 chrIV:410140-410721 3.4e-10 40_[+1]_39 chrXVI:581845-582415 4e-10 23_[+1]_56 chrXIII:480368-480934 4e-10 29_[-1]_50 chrXI:202822-203294 4e-10 32_[+1]_47 chrX:414690-415313 4e-10 56_[+1]_23 chrVII:876151-876743 4e-10 38_[+1]_41 chrVII:121978-122692 4e-10 25_[+1]_54 chrV:135159-135728 4e-10 41_[-1]_38 chrXIV:546922-547433 9.9e-10 38_[+1]_41 chrXII:92265-92960 9.9e-10 57_[+1]_22 chrXV:594050-594683 1.3e-09 47_[-1]_32 chrVII:700196-701274 1.5e-09 40_[+1]_39 chrXVI:768922-769505 1.7e-09 53_[-1]_26 chrXV:438402-439003 1.7e-09 55_[+1]_24 chrXII:875229-875683 1.7e-09 34_[+1]_45 chrXI:578780-579375 1.7e-09 2_[+1]_77 chrIV:359354-359886 1.7e-09 71_[+1]_8 chrIV:644919-645409 2e-09 48_[-1]_31 chrIII:168073-168633 2e-09 7_[-1]_72 chrII:350586-351127 2e-09 61_[+1]_18 chrXVI:860116-860670 2.3e-09 75_[+1]_4 chrXVI:572020-572628 2.3e-09 34_[+1]_45 chrXV:281911-282535 2.3e-09 30_[+1]_49 chrX:531479-532220 2.3e-09 68_[+1]_11 chrVII:930737-931242 2.3e-09 23_[-1]_56 chrX:374187-374836 3.4e-09 54_[-1]_25 chrX:355119-355739 3.4e-09 35_[+1]_44 chrVII:405264-405806 3.4e-09 25_[+1]_54 chrII:405549-406260 3.4e-09 64_[+1]_15 chrIV:488463-489161 3.9e-09 44_[-1]_35 chrXV:113577-114140 5.6e-09 35_[+1]_44 chrX:58647-59601 5.6e-09 35_[-1]_44 chrV:130834-131417 5.6e-09 16_[-1]_63 chrIX:325394-326141 5.6e-09 72_[+1]_7 chrIX:174795-175390 5.6e-09 30_[+1]_49 chrIV:433981-434605 5.6e-09 30_[-1]_49 chrII:266131-266699 5.6e-09 54_[+1]_25 chrXIII:586404-586923 7.2e-09 32_[-1]_47 chrXIII:372158-372736 7.2e-09 57_[-1]_22 chrXII:687623-688179 7.2e-09 17_[-1]_62 chrXI:379454-380017 7.2e-09 37_[+1]_42 chrVIII:85096-85582 7.2e-09 18_[-1]_61 chrXVI:622262-622872 1.6e-08 32_[-1]_47 chrXVI:559961-560528 1.6e-08 13_[-1]_66 chrXIV:374645-375298 1.6e-08 7_[+1]_72 chrVIII:237615-238152 1.6e-08 24_[-1]_55 chrVI:157658-158226 1.6e-08 33_[-1]_46 chrIV:1095097-1095715 1.6e-08 23_[-1]_56 chrXV:976173-976725 2e-08 63_[+1]_16 chrX:422576-423357 2e-08 62_[+1]_17 chrX:390866-391309 2e-08 15_[-1]_64 chrXIII:837668-838297 2.2e-08 53_[+1]_26 chrX:353992-354610 2.2e-08 50_[+1]_29 chrVI:210445-210905 2.2e-08 3_[-1]_76 chrVI:167256-167689 2.2e-08 72_[+1]_7 chrIV:946137-946618 2.2e-08 42_[+1]_37 chrXVI:810440-811040 5e-08 28_[+1]_51 chrXV:487209-487718 5e-08 68_[+1]_11 chrXIV:632393-632932 5e-08 29_[+1]_50 chrXII:975676-976276 5e-08 66_[-1]_13 chrXI:74408-74992 5e-08 16_[+1]_63 chrVII:730914-731449 5e-08 48_[+1]_31 chrX:617743-618192 8.1e-08 71_[+1]_8 chrXVI:55836-56523 1.3e-07 49_[-1]_30 chrXIII:378922-379646 1.3e-07 78_[-1]_1 chrXI:302668-303273 1.3e-07 72_[+1]_7 chrVII:287079-287668 1.3e-07 36_[-1]_43 chrVIII:466747-467365 1.4e-07 24_[+1]_55 chrXVI:743794-744797 2.7e-07 79_[+1] chrX:523843-524298 2.9e-07 1_[-1]_78 chrVIII:132801-133352 2.9e-07 9_[-1]_70 chrV:492145-492575 2.9e-07 51_[-1]_28 chrIV:980713-981278 2.9e-07 38_[-1]_41 chrIV:619685-620349 2.9e-07 11_[-1]_68 chrI:182341-182782 2.9e-07 20_[-1]_59 chrXIII:463248-463917 3.6e-07 62_[+1]_17 chrXII:426899-427474 3.6e-07 36_[+1]_43 chrX:541303-541760 3.6e-07 67_[+1]_12 chrIX:323957-324628 3.6e-07 70_[-1]_9 chrXII:962693-963343 4.9e-07 13_[-1]_66 chrII:347398-347937 4.9e-07 38_[+1]_41 chrII:9341-9919 4.9e-07 55_[+1]_24 chrXV:274482-275025 8.4e-07 39_[+1]_40 chrVI:191300-191818 8.4e-07 13_[-1]_66 chrIV:1150547-1151173 8.4e-07 41_[-1]_38 chrVII:706935-707357 9.6e-07 21_[-1]_58 chrXII:628152-628874 1.4e-06 3_[+1]_76 chrXI:458224-459027 1.4e-06 64_[+1]_15 chrVII:422878-423504 1.4e-06 33_[+1]_46 chrV:288123-288762 1.4e-06 60_[-1]_19 chrI:180939-181525 1.4e-06 41_[+1]_38 chrXIII:362841-363345 2.1e-06 61_[+1]_18 chrXI:313169-313721 2.1e-06 15_[-1]_64 chrVIII:62529-63013 2.1e-06 74_[+1]_5 chrVII:110387-110970 2.1e-06 6_[-1]_73 chrXII:366002-366953 3.1e-06 38_[-1]_41 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRGRTCVBSGGTTCGAWYCCS MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RRGRTCVBSGGTTCGAWYCCS width=21 seqs=125 chrXIV:631494-632162 ( 78) GAGGTCCCGGGTTCGAGTCCC 1 chrIII:123363-123838 ( 37) GAGGTCCCGGGTTCGAGTCCC 1 chrXV:853998-854441 ( 28) GAGGTCATCGGTTCGATTCCG 1 chrXII:214664-215184 ( 19) GAGGTCATCGGTTCGATTCCG 1 chrV:311759-312324 ( 42) GAGGTCATCGGTTCGATTCCG 1 chrI:166024-166629 ( 33) GAGGTCATCGGTTCGATTCCG 1 chrXVI:880024-880586 ( 51) GGGATCAGCGGTTCGATCCCG 1 chrXIV:602099-602598 ( 57) GGGATCAGCGGTTCGATCCCG 1 chrXIV:569594-570166 ( 47) GGGATCAGCGGTTCGATCCCG 1 chrXII:1051821-1052371 ( 35) GGGATCAGCGGTTCGATCCCG 1 chrXII:734689-735032 ( 35) GGGATCAGCGGTTCGATCCCG 1 chrVII:738872-739419 ( 70) GGGATCAGCGGTTCGATCCCG 1 chrIX:210485-210964 ( 34) GGGATCAGCGGTTCGATCCCG 1 chrIV:667738-668264 ( 66) GGGATCAGCGGTTCGATCCCG 1 chrII:197210-197873 ( 46) GGGATCAGCGGTTCGATCCCG 1 chrXIII:290548-291167 ( 35) GGAGACCGGGGTTCGACTCCC 1 chrVII:541610-542194 ( 39) GGAGACCGGGGTTCGACTCCC 1 chrVII:401327-401778 ( 35) GGAGACCGGGGTTCGACTCCC 1 chrVII:328355-328969 ( 12) GGAGACCGGGGTTCGACTCCC 1 chrV:486878-487753 ( 76) GGAGACCGGGGTTCGACTCCC 1 chrV:176780-177454 ( 73) GGAGACCGGGGTTCGACTCCC 1 chrIX:370211-370647 ( 79) GGAGACCGGGGTTCGACTCCC 1 chrIV:1016952-1017536 ( 23) GGAGACCGGGGTTCGACTCCC 1 chrIII:82236-82748 ( 30) GGAGACCGGGGTTCGACTCCC 1 chrII:644951-645478 ( 44) GGAGACCGGGGTTCGACTCCC 1 chrVII:779342-779945 ( 64) GGGGACACGGGTTCGATTCTC 1 chrXVI:856748-857160 ( 40) GAGGTCTCCGGTTCGATTCCG 1 chrXIII:320925-321339 ( 75) GAGGTCTCCGGTTCGATTCCG 1 chrXII:656686-657214 ( 44) GAGGTCTCCGGTTCGATTCCG 1 chrIV:410140-410721 ( 41) GAGGTCTCCGGTTCGATTCCG 1 chrXVI:581845-582415 ( 24) AAGGTTAGGGGTTCGAGCCCC 1 chrXIII:480368-480934 ( 30) AAGGTTAGGGGTTCGAGCCCC 1 chrXI:202822-203294 ( 33) AAGGTTAGGGGTTCGAGCCCC 1 chrX:414690-415313 ( 57) AAGGTTAGGGGTTCGAGCCCC 1 chrVII:876151-876743 ( 39) AAGGTTAGGGGTTCGAGCCCC 1 chrVII:121978-122692 ( 26) AAGGTTAGGGGTTCGAGCCCC 1 chrV:135159-135728 ( 42) AAGGTTAGGGGTTCGAGCCCC 1 chrXIV:546922-547433 ( 39) GAGGCCCTGGGTTCAATTCCC 1 chrXII:92265-92960 ( 58) GAGGCCCTGGGTTCAATTCCC 1 chrXV:594050-594683 ( 48) TGAGGCCCGGGTTCGATTCCC 1 chrVII:700196-701274 ( 41) GGAGGCGCGGGTTCAAACCCC 1 chrXVI:768922-769505 ( 54) AATGTCAGGGGTTCGAGCCCC 1 chrXV:438402-439003 ( 56) AATGTCAGGGGTTCGAGCCCC 1 chrXII:875229-875683 ( 35) AATGTCAGGGGTTCGAGCCCC 1 chrXI:578780-579375 ( 3) AATGTCAGGGGTTCGAGCCCC 1 chrIV:359354-359886 ( 72) AATGTCAGGGGTTCGAGCCCC 1 chrIV:644919-645409 ( 49) GACAACCCCGGTTCGAATCCG 1 chrIII:168073-168633 ( 8) GACAACCCCGGTTCGAATCCG 1 chrII:350586-351127 ( 62) GACAACCCCGGTTCGAATCCG 1 chrXVI:860116-860670 ( 76) TGGGCCCCCGGTTCGATTCCG 1 chrXVI:572020-572628 ( 35) TGGGCCCCCGGTTCGATTCCG 1 chrXV:281911-282535 ( 31) TGGGCCCCCGGTTCGATTCCG 1 chrX:531479-532220 ( 69) TGGGCCCCCGGTTCGATTCCG 1 chrVII:930737-931242 ( 24) TGGGCCCCCGGTTCGATTCCG 1 chrX:374187-374836 ( 55) AAGATTATGGGTTCGACCCCC 1 chrX:355119-355739 ( 36) AAGATTATGGGTTCGACCCCC 1 chrVII:405264-405806 ( 26) AAGATTATGGGTTCGACCCCC 1 chrII:405549-406260 ( 65) AAGATTATGGGTTCGACCCCC 1 chrIV:488463-489161 ( 45) AAGATCCCGAGTTCGAACCTC 1 chrXV:113577-114140 ( 36) GAGATCATCGGTTCAAATCCG 1 chrX:58647-59601 ( 36) GAGATCATCGGTTCAAATCCG 1 chrV:130834-131417 ( 17) AACAACCCCGGTTCGAATCCG 1 chrIX:325394-326141 ( 73) GAGATCATCGGTTCAAATCCG 1 chrIX:174795-175390 ( 31) GAGATCATCGGTTCAAATCCG 1 chrIV:433981-434605 ( 31) GAGATCATCGGTTCAAATCCG 1 chrII:266131-266699 ( 55) GAGATCATCGGTTCAAATCCG 1 chrXIII:586404-586923 ( 33) AACGTCCCCAGTTCGATCCTG 1 chrXIII:372158-372736 ( 58) AACGTCCCCAGTTCGATCCTG 1 chrXII:687623-688179 ( 18) AACGTCCCCAGTTCGATCCTG 1 chrXI:379454-380017 ( 38) AACGTCCCCAGTTCGATCCTG 1 chrVIII:85096-85582 ( 19) AACGTCCCCAGTTCGATCCTG 1 chrXVI:622262-622872 ( 33) GAGGTCCTGTGTTCGATCCAC 1 chrXVI:559961-560528 ( 14) GAGGTCCTGTGTTCGATCCAC 1 chrXIV:374645-375298 ( 8) GAGGTCCTGTGTTCGATCCAC 1 chrVIII:237615-238152 ( 25) GAGGTCCTGTGTTCGATCCAC 1 chrVI:157658-158226 ( 34) GAGGTCCTGTGTTCGATCCAC 1 chrIV:1095097-1095715 ( 24) GAGGTCCTGTGTTCGATCCAC 1 chrXV:976173-976725 ( 64) AAGGTCGAGAGTTCGAACCTC 1 chrX:422576-423357 ( 63) AAGGTCGAGAGTTCGAACCTC 1 chrX:390866-391309 ( 16) AAGGTCGAGAGTTCGAACCTC 1 chrXIII:837668-838297 ( 54) GAGATCGGGCGTTCGACTCGC 1 chrX:353992-354610 ( 51) GAGATCGGGCGTTCGACTCGC 1 chrVI:210445-210905 ( 4) GAGATCGGGCGTTCGACTCGC 1 chrVI:167256-167689 ( 73) GAGATCGGGCGTTCGACTCGC 1 chrIV:946137-946618 ( 43) GAGATCGGGCGTTCGACTCGC 1 chrXVI:810440-811040 ( 29) AAGATCGTGAGTTCAACCCTC 1 chrXV:487209-487718 ( 69) AAGATCGTGAGTTCAACCCTC 1 chrXIV:632393-632932 ( 30) AAGATCGTGAGTTCAACCCTC 1 chrXII:975676-976276 ( 67) AAGATCGTGAGTTCAACCCTC 1 chrXI:74408-74992 ( 17) AAGATCGTGAGTTCAACCCTC 1 chrVII:730914-731449 ( 49) AAGATCGTGAGTTCAACCCTC 1 chrX:617743-618192 ( 72) GGATGCAAGGGTTCGAATCCC 1 chrXVI:55836-56523 ( 50) AGGGTTGCAGGTTCAATTCCT 1 chrXIII:378922-379646 ( 79) AGGGTTGCAGGTTCAATTCCT 1 chrXI:302668-303273 ( 73) AGGGTTGCAGGTTCAATTCCT 1 chrVII:287079-287668 ( 37) AGGGTTGCAGGTTCAATTCCT 1 chrVIII:466747-467365 ( 25) AAGGTCGCTAGTTCAATTCTG 1 chrXVI:743794-744797 ( 80) AAGGTCGTTAGTTCAATTCTG 1 chrX:523843-524298 ( 2) GCCCGCGCAGGTTCGAGTCCT 1 chrVIII:132801-133352 ( 10) GCCCGCGCAGGTTCGAGTCCT 1 chrV:492145-492575 ( 52) AAGATTCCAGGTTCAAGTCCT 1 chrIV:980713-981278 ( 39) GCCCGCGCAGGTTCGAGTCCT 1 chrIV:619685-620349 ( 12) AAGATTCCAGGTTCAAGTCCT 1 chrI:182341-182782 ( 21) GCCCGCGCAGGTTCGAGTCCT 1 chrXIII:463248-463917 ( 63) CCAGATCGGGGTTCAATTCCC 1 chrXII:426899-427474 ( 37) CCAGATCGGGGTTCAATTCCC 1 chrX:541303-541760 ( 68) CCAGATCGGGGTTCAATTCCC 1 chrIX:323957-324628 ( 71) CCAGATCGGGGTTCAATTCCC 1 chrXII:962693-963343 ( 14) GTCCGCGCGAGTTCGAACCTC 1 chrII:347398-347937 ( 39) GTCCGCGCGAGTTCGAACCTC 1 chrII:9341-9919 ( 56) GTCCGCGCGAGTTCGAACCTC 1 chrXV:274482-275025 ( 40) ACCTGCGCAGGTTCGAATCCT 1 chrVI:191300-191818 ( 14) ACCTGCGCAGGTTCGAATCCT 1 chrIV:1150547-1151173 ( 42) ACCTGCGCAGGTTCGAATCCT 1 chrVII:706935-707357 ( 22) TTGGTCCTTAGTTCGATCCTG 1 chrXII:628152-628874 ( 4) AGATGCAAGAGTTCGAATCTC 1 chrXI:458224-459027 ( 65) AGATGCAAGAGTTCGAATCTC 1 chrVII:422878-423504 ( 34) AGATGCAAGAGTTCGAATCTC 1 chrV:288123-288762 ( 61) GCCCGCGCTGGTTCAAATCCT 1 chrI:180939-181525 ( 42) AGATGCAAGAGTTCGAATCTC 1 chrXIII:362841-363345 ( 62) TGAAACCCTGGTTCGATTCTA 1 chrXI:313169-313721 ( 16) TGAAACCCTGGTTCGATTCTA 1 chrVIII:62529-63013 ( 75) TGAAACCCTGGTTCGATTCTA 1 chrVII:110387-110970 ( 7) TGAAACCCTGGTTCGATTCTA 1 chrXII:366002-366953 ( 39) AAAGGCTTAGGTTCGAACGCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRGRTCVBSGGTTCGAWYCCS MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 46640 bayes= 9.84665 E= 2.6e-413 28 -251 144 -185 80 -93 81 -331 -61 -19 170 -299 5 -151 157 -231 -79 -171 -27 94 -1361 219 -1361 -92 5 104 49 -299 -231 101 81 -36 -150 70 153 -231 -67 -219 196 -272 -1361 -1361 245 -1361 -1361 -1361 -1361 166 -1361 -1361 -1361 166 -1361 245 -1361 -1361 -50 -1361 209 -1361 166 -1361 -1361 -1361 -50 13 -19 39 -1361 119 -1361 88 -1361 244 -451 -1361 -272 188 -219 -40 -331 153 84 -150 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRGRTCVBSGGTTCGAWYCCS MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 125 E= 2.6e-413 0.384000 0.032000 0.496000 0.088000 0.552000 0.096000 0.320000 0.032000 0.208000 0.160000 0.592000 0.040000 0.328000 0.064000 0.544000 0.064000 0.184000 0.056000 0.152000 0.608000 0.000000 0.832000 0.000000 0.168000 0.328000 0.376000 0.256000 0.040000 0.064000 0.368000 0.320000 0.248000 0.112000 0.296000 0.528000 0.064000 0.200000 0.040000 0.712000 0.048000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.224000 0.000000 0.776000 0.000000 1.000000 0.000000 0.000000 0.000000 0.224000 0.200000 0.160000 0.416000 0.000000 0.416000 0.000000 0.584000 0.000000 0.992000 0.008000 0.000000 0.048000 0.672000 0.040000 0.240000 0.032000 0.528000 0.328000 0.112000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRGRTCVBSGGTTCGAWYCCS MEME-1 regular expression -------------------------------------------------------------------------------- [GA][AG][GA][GA]TC[CAG][CGT][GC][GA]GTTC[GA]A[TAC][TC]C[CT][CG] -------------------------------------------------------------------------------- Time 334.00 secs. ******************************************************************************** ******************************************************************************** MOTIF TGGCYYAGTKGKTWRAGSSHH MEME-2 width = 21 sites = 103 llr = 1525 E-value = 1.2e-256 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGGCYYAGTKGKTWRAGSSHH MEME-2 Description -------------------------------------------------------------------------------- Simplified A :2:::2a1::::26652::32 pos.-specific C ::1753::12::1::2:6533 probability G :89:22:9:5a5::3273411 matrix T a::333::93:5741111124 bits 2.5 * 2.2 * * 2.0 * * * 1.7 * * ** * Relative 1.5 *** ** * Entropy 1.2 **** *** * (21.4 bits) 1.0 **** *** ** *** 0.7 ***** *** ** * *** 0.5 ***** ********* *** 0.2 ******************* 0.0 --------------------- Multilevel TGGCCTAGTGGGTAAAGCCCT consensus A TTC T T TGC GGAC sequence G C TA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGCYYAGTKGKTWRAGSSHH MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXIV:602099-602598 + 21 1.12e-10 AATGGTCTCT TGGCCCAGTTGGTTAAGGCAC CGTGCTAATA chrXII:1051821-1052371 - 71 1.12e-10 ATGGTCTCT TGGCCCAGTTGGTTAAGGCAC CGTGCTAATA chrVII:738872-739419 + 34 1.12e-10 ATAGGTCTCT TGGCCCAGTTGGTTAAGGCAC CGTGCTAATA chrV:551012-551684 - 33 1.12e-10 ACAGGTCTCT TGGCCCAGTTGGTTAAGGCAC CGTGCTAATA chrV:443019-443517 - 30 1.12e-10 TTTGGTCTCT TGGCCCAGTTGGTTAAGGCAC CGTGCTAATA chrII:197210-197873 + 10 1.12e-10 AAGGTCTCT TGGCCCAGTTGGTTAAGGCAC CGTGCTAATA chrXV:853998-854441 - 63 1.43e-10 TCAGGGCACA TGGCGCAGTTGGTAGCGCGCT TCCCTTGCAA chrXII:214664-215184 - 54 1.43e-10 TTAGGGCACA TGGCGCAGTTGGTAGCGCGCT TCCCTTGCAA chrV:311759-312324 - 77 1.43e-10 ACA TGGCGCAGTTGGTAGCGCGCT TCCCTTGCAA chrXVI:856748-857160 + 5 3.48e-10 CGTG TGGCGTAGTCGGTAGCGCGCT CCCTTAGCAT chrXV:113577-114140 + 1 3.48e-10 . TGGCCAAGTTGGTAAGGCGCC ACACTAGTAA chrXII:784154-784569 + 50 3.48e-10 ACCGTCCCAG TGGCCGAGTGGTTAAGGCGAT GCCTGCTATT chrXII:656686-657214 - 79 3.48e-10 G TGGCGTAGTCGGTAGCGCGCT CCCTTAGCAT chrXI:219627-220139 + 69 3.48e-10 ATAGGGCGTG TGGCGTAGTCGGTAGCGCGCT CCCTTAGCAT chrX:197129-197627 - 30 3.48e-10 TTAGGGCGTG TGGCGTAGTCGGTAGCGCGCT CCCTTAGCAT chrX:58647-59601 - 71 3.48e-10 AAGCTTCTA TGGCCAAGTTGGTAAGGCGCC ACACTAGTAA chrVI:204793-205230 - 8 3.48e-10 TTCGGGCGTG TGGCGTAGTCGGTAGCGCGCT CCCTTAG chrVI:191300-191818 - 77 3.48e-10 CAG TGGCCGAGTGGTTAAGGCGAT GCCCTGCTAT chrIX:325394-326141 + 38 3.48e-10 CGAGCTTCTA TGGCCAAGTTGGTAAGGCGCC ACACTAGTAA chrIV:433981-434605 - 66 3.48e-10 GAAGCTTCTA TGGCCAAGTTGGTAAGGCGCC ACACTAGTAA chrIV:410140-410721 + 6 3.48e-10 GCGTG TGGCGTAGTCGGTAGCGCGCT CCCTTAGCAT chrII:266131-266699 + 20 3.48e-10 ACTGCTTCTA TGGCCAAGTTGGTAAGGCGCC ACACTAGTAA chrXII:731872-732268 + 77 7.74e-10 AATGGGAGTT TGGCCGAGTGGTTTAAGGCGT CAG chrX:617743-618192 + 9 7.74e-10 TGGGAGTT TGGCCGAGTGGTTTAAGGCGT CAGATTTAGG chrXIII:258955-259496 - 37 9.42e-10 TATGGCAACT TGGCCGAGTGGTTAAGGCGAA AGATTAGAAA chrX:523843-524298 - 46 9.42e-10 AAAGGCAACT TGGCCGAGTGGTTAAGGCGAA AGATTAGAAA chrVIII:132801-133352 - 54 9.42e-10 AGTGGCAACT TGGCCGAGTGGTTAAGGCGAA AGATTAGAAA chrIV:437490-438085 + 42 9.42e-10 TAAGGCAACT TGGCCGAGTGGTTAAGGCGAA AGATTAGAAA chrI:182341-182782 - 65 9.42e-10 TTTGGCAACT TGGCCGAGTGGTTAAGGCGAA AGATTAGAAA chrIII:227663-228206 + 65 1.36e-09 AATGGCACTA TGGCCGAGTGGTTAAGGCGAG AGACTCGAAT chrXV:487209-487718 + 33 3.76e-09 TTAGACTCCA TGGCCAAGTTGGTTAAGGCGT GCGACTGTTA chrVII:730914-731449 + 13 3.76e-09 AAAGACTCCA TGGCCAAGTTGGTTAAGGCGT GCGACTGTTA chrVI:137166-137959 - 20 3.76e-09 ACTGACTCCA TGGCCAAGTTGGTTAAGGCGT GCGACTGTTA chrIII:127516-127927 + 52 3.76e-09 AATGACTCCA TGGCCAAGTTGGTTAAGGCGT GCGACTGTTA chrXII:962693-963343 - 60 1.23e-08 GACGGAGGGT TGGCCGAGTGGTCTAAGGCGG CAGACTTAAG chrXI:83959-84471 + 50 1.23e-08 TATGGAGGGT TGGCCGAGTGGTCTAAGGCGG CAGACTTAAG chrX:424288-424785 - 2 1.23e-08 GATGGAGGGT TGGCCGAGTGGTCTAAGGCGG C chrIV:359354-359886 + 14 1.23e-08 TCATCCTTGT TAGCTCAGTTGGTAGAGCGTT CGGCTTTTAA chrII:9341-9919 + 10 1.23e-08 GTGGAGGGT TGGCCGAGTGGTCTAAGGCGG CAGACTTAAG chrXIII:586404-586923 - 69 2.11e-08 TATGGTTTCG TGGTCTAGTCGGTTATGGCAT CTGCTTAACA chrXIII:504473-505280 + 76 2.11e-08 AGTGGTTGTT TGGCCGAGCGGTCTAAGGCGC CTGA chrXIII:420316-420990 - 31 2.11e-08 ACAGGTTTCG TGGTCTAGTCGGTTATGGCAT CTGCTTAACA chrXII:687623-688179 - 54 2.11e-08 ATAGGTTTCG TGGTCTAGTCGGTTATGGCAT CTGCTTAACA chrXI:379454-380017 + 2 2.11e-08 G TGGTCTAGTCGGTTATGGCAT CTGCTTAACA chrVIII:85096-85582 - 55 2.11e-08 TTTGGTTTCG TGGTCTAGTCGGTTATGGCAT CTGCTTAACA chrVII:857236-857641 - 76 2.11e-08 TGTT TGGCCGAGCGGTCTAAGGCGC CTGATTCAAG chrVII:823251-823725 + 51 2.11e-08 AGTGGTTTCG TGGTCTAGTCGGTTATGGCAT CTGCTTAACA chrVII:412114-412597 - 35 2.11e-08 ACTGGTTTCG TGGTCTAGTCGGTTATGGCAT CTGCTTAACA chrV:469233-469694 + 51 2.11e-08 ATTGGTTTCG TGGTCTAGTCGGTTATGGCAT CTGCTTAACA chrXVI:559961-560528 - 68 4.42e-08 TGAGCGGATT TAGCTCAGTTGGGAGAGCGCC AGACTGAAGA chrXIII:352059-352507 + 54 4.42e-08 TAAGCGGATT TAGCTCAGTTGGGAGAGCGCC AGACTGAAGA chrVIII:237615-238152 - 79 4.42e-08 T TAGCTCAGTTGGGAGAGCGCC AGACTGAAGA chrIV:1095097-1095715 - 78 4.42e-08 CT TAGCTCAGTTGGGAGAGCGCC AGACTGAAGA chrXIII:480368-480934 - 65 6.99e-08 GTAGCCTTGT TGGCGCAATCGGTAGCGCGTA TGACTCTTAA chrX:414690-415313 + 22 6.99e-08 TTAGCCTTGT TGGCGCAATCGGTAGCGCGTA TGACTCTTAA chrVII:876151-876743 + 4 6.99e-08 TGT TGGCGCAATCGGTAGCGCGTA TGACTCTTAA chrVI:226545-226967 - 27 6.99e-08 AATGCCTTGT TGGCGCAATCGGTAGCGCGTA TGACTCTTAA chrV:435583-436067 - 22 6.99e-08 AGAGCCTTGT TGGCGCAATCGGTAGCGCGTA TGACTCTTAA chrV:135159-135728 - 77 6.99e-08 TGT TGGCGCAATCGGTAGCGCGTA TGACTCTTAA chrIV:1352346-1352762 - 7 6.99e-08 ATAGCCTTGT TGGCGCAATCGGTAGCGCGTA TGACTC chrXII:605148-605649 - 57 8.69e-08 AATGCTCGTG TAGCTCAGTGGTTAGAGCTTC GTGCTTATAG chrIV:884176-884652 + 4 8.69e-08 GTG TAGCTCAGTGGTTAGAGCTTC GTGCTTATAG chrXVI:860116-860670 + 43 3.09e-07 CAAGCGCAAG TGGTTTAGTGGTAAAATCCAA CGTTGCCATC chrXVI:572020-572628 + 2 3.09e-07 G TGGTTTAGTGGTAAAATCCAA CGTTGCCATC chrXV:976173-976725 + 29 3.09e-07 TGCGCTTCAG TAGCTCAGTAGGAAGAGCGTC AGTCTCATAA chrXV:226443-226924 - 21 3.09e-07 TCAGCGCAAG TGGTTTAGTGGTAAAATCCAA CGTTGCCATC chrXIII:183753-184184 - 23 3.09e-07 ATCGCGCAAG TGGTTTAGTGGTAAAATCCAA CGTTGCCATC chrX:531479-532220 + 36 3.09e-07 TGAGCGCAAG TGGTTTAGTGGTAAAATCCAA CGTTGCCATC chrX:422576-423357 + 28 3.09e-07 TATGCTTCAG TAGCTCAGTAGGAAGAGCGTC AGTCTCATAA chrX:390866-391309 - 51 3.09e-07 AGTGCTTCAG TAGCTCAGTAGGAAGAGCGTC AGTCTCATAA chrVII:930737-931242 - 57 3.09e-07 TAAGCGCAAG TGGTTTAGTGGTAAAATCCAA CGTTGCCATC chrVI:161990-162457 + 62 3.09e-07 CAAGCGCAAG TGGTTTAGTGGTAAAATCCAA CGTTGCCATC chrIV:992581-993086 + 56 3.09e-07 TGAGCGCAAG TGGTTTAGTGGTAAAATCCAA CGTTGCCATC chrIV:83285-83820 + 53 3.09e-07 TTAGCGCAAG TGGTTTAGTGGTAAAATCCAA CGTTGCCATC chrXV:464211-464752 + 26 6.03e-07 CAAGGGCGTG TGGTCTAGTGGTATGATTCTC GCTTTGGGCG chrXV:300836-301409 + 32 6.03e-07 ATCGGGCGTG TGGTCTAGTGGTATGATTCTC GCTTTGGGCG chrXIII:195892-196406 - 44 6.03e-07 CAAGGGCGTG TGGTCTAGTGGTATGATTCTC GCTTTGGGCG chrVIII:388668-389238 - 65 6.03e-07 CATGGGCGTG TGGTCTAGTGGTATGATTCTC GCTTTGGGCG chrVI:101092-101665 + 55 6.03e-07 TTCGGGCGTG TGGTCTAGTGGTATGATTCTC GCTTTGGGCG chrI:138890-139383 + 73 6.03e-07 TACGGGCGTG TGGTCTAGTGGTATGATTCTC GCTTTGG chrXV:287988-288391 + 60 7.05e-07 CTTCTCTCGG TAGCCAAGTTGGTTTAAGGCG CAAGACTGTA chrXIII:837668-838297 + 3 7.05e-07 GG TAGCCAAGTTGGTTTAAGGCG CAAGACTGTA chrXIII:168564-169069 + 36 7.05e-07 TCACTCTCGG TAGCCAAGTTGGTTTAAGGCG CAAGACTGTA chrVI:210445-210905 - 55 7.05e-07 CGACTCTCGG TAGCCAAGTTGGTTTAAGGCG CAAGACTGTA chrVI:167256-167689 + 22 7.05e-07 CGACTCTCGG TAGCCAAGTTGGTTTAAGGCG CAAGACTGTA chrXI:0-1067 + 73 7.60e-07 TCACGGCACT TGCCTCAGCGGTTTATACCCT GTGCAAT chrIV:619685-620349 - 47 8.20e-07 TTGTTCCTCG TGGCCCAATGGTCACGGCGTC TGGCTACGAA chrXI:665468-666798 - 52 1.54e-06 GCACGGCACT TGCCTCAGCGGTCTATACCCT GTGCCATTTA chrX:745246-745735 + 7 1.54e-06 TAATGG TAGTGGAGTTGGATATGGGTA ATTGGAGGGT chrIX:438806-439887 - 3 1.54e-06 GCACGGTACT TGCCTCAGCGGTCTATACCCT GT chrIV:1524123-1525661 - 14 1.54e-06 ACACGGCACT TGCCTCAGCGGTCTATACCCT GTGCCATTTA chrIV:1256840-1257308 - 28 1.54e-06 TTAGCGAAAG TGGTTCAGTGGTTAGAATTCA TGCTTCCCAA chrI:229147-230194 - 24 1.54e-06 ACACGGCACT TGCCTCAGCGGTCTATACCCT GTCCCATTTA chrI:5-1113 + 41 1.54e-06 GCACGGCACT TGCCTCAGCGGTCTATACCCT GTGCCATTTA chrXIV:95997-96669 - 2 1.87e-06 CATGGGCGGT TAGTGTAGTGGTTATCATCCC A chrVII:779342-779945 + 30 1.87e-06 CCCGGGCGGT TAGTGTAGTGGTTATCATCCC ACCCTTCCAA chrXII:489294-489543 + 30 1.99e-06 CGATCAACTG TAGTTAAGCTGGTAAGAGCCT GACCGAGTAG chrXII:468733-468983 + 54 1.99e-06 CGATCAACTG TAGTTAAGCTGGTAAGAGCCT GACCGAGTAG chrV:130834-131417 - 51 3.97e-06 AGAGGTTTTA TAGTGTAGTGGTTATCACTTT CGGTTTTGAT chrIV:520708-521232 + 59 3.97e-06 TAGGGTCCTA TAGTGTAGTGGTTATCACTTT CGGTTTTGAT chrIII:168073-168633 - 42 3.97e-06 CCTGGTCCTA TAGTGTAGTGGTTATCACTTT CGGTTTTGAT chrII:350586-351127 + 28 3.97e-06 AAGGGTTTTA TAGTGTAGTGGTTATCACTTT CGGTTTTGAT chrI:142063-143688 - 45 4.40e-06 ACTTAGCAGC TGGCTTAGCTGGCTTAGCAGC CTTCTTAGCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGCYYAGTKGKTWRAGSSHH MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:602099-602598 1.1e-10 20_[+2]_59 chrXII:1051821-1052371 1.1e-10 70_[-2]_9 chrVII:738872-739419 1.1e-10 33_[+2]_46 chrV:551012-551684 1.1e-10 32_[-2]_47 chrV:443019-443517 1.1e-10 29_[-2]_50 chrII:197210-197873 1.1e-10 9_[+2]_70 chrXV:853998-854441 1.4e-10 62_[-2]_17 chrXII:214664-215184 1.4e-10 53_[-2]_26 chrV:311759-312324 1.4e-10 76_[-2]_3 chrXVI:856748-857160 3.5e-10 4_[+2]_75 chrXV:113577-114140 3.5e-10 [+2]_79 chrXII:784154-784569 3.5e-10 49_[+2]_30 chrXII:656686-657214 3.5e-10 78_[-2]_1 chrXI:219627-220139 3.5e-10 68_[+2]_11 chrX:197129-197627 3.5e-10 29_[-2]_50 chrX:58647-59601 3.5e-10 70_[-2]_9 chrVI:204793-205230 3.5e-10 7_[-2]_72 chrVI:191300-191818 3.5e-10 76_[-2]_3 chrIX:325394-326141 3.5e-10 37_[+2]_42 chrIV:433981-434605 3.5e-10 65_[-2]_14 chrIV:410140-410721 3.5e-10 5_[+2]_74 chrII:266131-266699 3.5e-10 19_[+2]_60 chrXII:731872-732268 7.7e-10 76_[+2]_3 chrX:617743-618192 7.7e-10 8_[+2]_71 chrXIII:258955-259496 9.4e-10 36_[-2]_43 chrX:523843-524298 9.4e-10 45_[-2]_34 chrVIII:132801-133352 9.4e-10 53_[-2]_26 chrIV:437490-438085 9.4e-10 41_[+2]_38 chrI:182341-182782 9.4e-10 64_[-2]_15 chrIII:227663-228206 1.4e-09 64_[+2]_15 chrXV:487209-487718 3.8e-09 32_[+2]_47 chrVII:730914-731449 3.8e-09 12_[+2]_67 chrVI:137166-137959 3.8e-09 19_[-2]_60 chrIII:127516-127927 3.8e-09 51_[+2]_28 chrXII:962693-963343 1.2e-08 59_[-2]_20 chrXI:83959-84471 1.2e-08 49_[+2]_30 chrX:424288-424785 1.2e-08 1_[-2]_78 chrIV:359354-359886 1.2e-08 13_[+2]_66 chrII:9341-9919 1.2e-08 9_[+2]_70 chrXIII:586404-586923 2.1e-08 68_[-2]_11 chrXIII:504473-505280 2.1e-08 75_[+2]_4 chrXIII:420316-420990 2.1e-08 30_[-2]_49 chrXII:687623-688179 2.1e-08 53_[-2]_26 chrXI:379454-380017 2.1e-08 1_[+2]_78 chrVIII:85096-85582 2.1e-08 54_[-2]_25 chrVII:857236-857641 2.1e-08 75_[-2]_4 chrVII:823251-823725 2.1e-08 50_[+2]_29 chrVII:412114-412597 2.1e-08 34_[-2]_45 chrV:469233-469694 2.1e-08 50_[+2]_29 chrXVI:559961-560528 4.4e-08 67_[-2]_12 chrXIII:352059-352507 4.4e-08 53_[+2]_26 chrVIII:237615-238152 4.4e-08 78_[-2]_1 chrIV:1095097-1095715 4.4e-08 77_[-2]_2 chrXIII:480368-480934 7e-08 64_[-2]_15 chrX:414690-415313 7e-08 21_[+2]_58 chrVII:876151-876743 7e-08 3_[+2]_76 chrVI:226545-226967 7e-08 26_[-2]_53 chrV:435583-436067 7e-08 21_[-2]_58 chrV:135159-135728 7e-08 76_[-2]_3 chrIV:1352346-1352762 7e-08 6_[-2]_73 chrXII:605148-605649 8.7e-08 56_[-2]_23 chrIV:884176-884652 8.7e-08 3_[+2]_76 chrXVI:860116-860670 3.1e-07 42_[+2]_37 chrXVI:572020-572628 3.1e-07 1_[+2]_78 chrXV:976173-976725 3.1e-07 28_[+2]_51 chrXV:226443-226924 3.1e-07 20_[-2]_59 chrXIII:183753-184184 3.1e-07 22_[-2]_57 chrX:531479-532220 3.1e-07 35_[+2]_44 chrX:422576-423357 3.1e-07 27_[+2]_52 chrX:390866-391309 3.1e-07 50_[-2]_29 chrVII:930737-931242 3.1e-07 56_[-2]_23 chrVI:161990-162457 3.1e-07 61_[+2]_18 chrIV:992581-993086 3.1e-07 55_[+2]_24 chrIV:83285-83820 3.1e-07 52_[+2]_27 chrXV:464211-464752 6e-07 25_[+2]_54 chrXV:300836-301409 6e-07 31_[+2]_48 chrXIII:195892-196406 6e-07 43_[-2]_36 chrVIII:388668-389238 6e-07 64_[-2]_15 chrVI:101092-101665 6e-07 54_[+2]_25 chrI:138890-139383 6e-07 72_[+2]_7 chrXV:287988-288391 7e-07 59_[+2]_20 chrXIII:837668-838297 7e-07 2_[+2]_77 chrXIII:168564-169069 7e-07 35_[+2]_44 chrVI:210445-210905 7e-07 54_[-2]_25 chrVI:167256-167689 7e-07 21_[+2]_58 chrXI:0-1067 7.6e-07 72_[+2]_7 chrIV:619685-620349 8.2e-07 46_[-2]_33 chrXI:665468-666798 1.5e-06 51_[-2]_28 chrX:745246-745735 1.5e-06 6_[+2]_73 chrIX:438806-439887 1.5e-06 2_[-2]_77 chrIV:1524123-1525661 1.5e-06 13_[-2]_66 chrIV:1256840-1257308 1.5e-06 27_[-2]_52 chrI:229147-230194 1.5e-06 23_[-2]_56 chrI:5-1113 1.5e-06 40_[+2]_39 chrXIV:95997-96669 1.9e-06 1_[-2]_78 chrVII:779342-779945 1.9e-06 29_[+2]_50 chrXII:489294-489543 2e-06 29_[+2]_50 chrXII:468733-468983 2e-06 53_[+2]_26 chrV:130834-131417 4e-06 50_[-2]_29 chrIV:520708-521232 4e-06 58_[+2]_21 chrIII:168073-168633 4e-06 41_[-2]_38 chrII:350586-351127 4e-06 27_[+2]_52 chrI:142063-143688 4.4e-06 44_[-2]_35 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGCYYAGTKGKTWRAGSSHH MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGGCYYAGTKGKTWRAGSSHH width=21 seqs=103 chrXIV:602099-602598 ( 21) TGGCCCAGTTGGTTAAGGCAC 1 chrXII:1051821-1052371 ( 71) TGGCCCAGTTGGTTAAGGCAC 1 chrVII:738872-739419 ( 34) TGGCCCAGTTGGTTAAGGCAC 1 chrV:551012-551684 ( 33) TGGCCCAGTTGGTTAAGGCAC 1 chrV:443019-443517 ( 30) TGGCCCAGTTGGTTAAGGCAC 1 chrII:197210-197873 ( 10) TGGCCCAGTTGGTTAAGGCAC 1 chrXV:853998-854441 ( 63) TGGCGCAGTTGGTAGCGCGCT 1 chrXII:214664-215184 ( 54) TGGCGCAGTTGGTAGCGCGCT 1 chrV:311759-312324 ( 77) TGGCGCAGTTGGTAGCGCGCT 1 chrXVI:856748-857160 ( 5) TGGCGTAGTCGGTAGCGCGCT 1 chrXV:113577-114140 ( 1) TGGCCAAGTTGGTAAGGCGCC 1 chrXII:784154-784569 ( 50) TGGCCGAGTGGTTAAGGCGAT 1 chrXII:656686-657214 ( 79) TGGCGTAGTCGGTAGCGCGCT 1 chrXI:219627-220139 ( 69) TGGCGTAGTCGGTAGCGCGCT 1 chrX:197129-197627 ( 30) TGGCGTAGTCGGTAGCGCGCT 1 chrX:58647-59601 ( 71) TGGCCAAGTTGGTAAGGCGCC 1 chrVI:204793-205230 ( 8) TGGCGTAGTCGGTAGCGCGCT 1 chrVI:191300-191818 ( 77) TGGCCGAGTGGTTAAGGCGAT 1 chrIX:325394-326141 ( 38) TGGCCAAGTTGGTAAGGCGCC 1 chrIV:433981-434605 ( 66) TGGCCAAGTTGGTAAGGCGCC 1 chrIV:410140-410721 ( 6) TGGCGTAGTCGGTAGCGCGCT 1 chrII:266131-266699 ( 20) TGGCCAAGTTGGTAAGGCGCC 1 chrXII:731872-732268 ( 77) TGGCCGAGTGGTTTAAGGCGT 1 chrX:617743-618192 ( 9) TGGCCGAGTGGTTTAAGGCGT 1 chrXIII:258955-259496 ( 37) TGGCCGAGTGGTTAAGGCGAA 1 chrX:523843-524298 ( 46) TGGCCGAGTGGTTAAGGCGAA 1 chrVIII:132801-133352 ( 54) TGGCCGAGTGGTTAAGGCGAA 1 chrIV:437490-438085 ( 42) TGGCCGAGTGGTTAAGGCGAA 1 chrI:182341-182782 ( 65) TGGCCGAGTGGTTAAGGCGAA 1 chrIII:227663-228206 ( 65) TGGCCGAGTGGTTAAGGCGAG 1 chrXV:487209-487718 ( 33) TGGCCAAGTTGGTTAAGGCGT 1 chrVII:730914-731449 ( 13) TGGCCAAGTTGGTTAAGGCGT 1 chrVI:137166-137959 ( 20) TGGCCAAGTTGGTTAAGGCGT 1 chrIII:127516-127927 ( 52) TGGCCAAGTTGGTTAAGGCGT 1 chrXII:962693-963343 ( 60) TGGCCGAGTGGTCTAAGGCGG 1 chrXI:83959-84471 ( 50) TGGCCGAGTGGTCTAAGGCGG 1 chrX:424288-424785 ( 2) TGGCCGAGTGGTCTAAGGCGG 1 chrIV:359354-359886 ( 14) TAGCTCAGTTGGTAGAGCGTT 1 chrII:9341-9919 ( 10) TGGCCGAGTGGTCTAAGGCGG 1 chrXIII:586404-586923 ( 69) TGGTCTAGTCGGTTATGGCAT 1 chrXIII:504473-505280 ( 76) TGGCCGAGCGGTCTAAGGCGC 1 chrXIII:420316-420990 ( 31) TGGTCTAGTCGGTTATGGCAT 1 chrXII:687623-688179 ( 54) TGGTCTAGTCGGTTATGGCAT 1 chrXI:379454-380017 ( 2) TGGTCTAGTCGGTTATGGCAT 1 chrVIII:85096-85582 ( 55) TGGTCTAGTCGGTTATGGCAT 1 chrVII:857236-857641 ( 76) TGGCCGAGCGGTCTAAGGCGC 1 chrVII:823251-823725 ( 51) TGGTCTAGTCGGTTATGGCAT 1 chrVII:412114-412597 ( 35) TGGTCTAGTCGGTTATGGCAT 1 chrV:469233-469694 ( 51) TGGTCTAGTCGGTTATGGCAT 1 chrXVI:559961-560528 ( 68) TAGCTCAGTTGGGAGAGCGCC 1 chrXIII:352059-352507 ( 54) TAGCTCAGTTGGGAGAGCGCC 1 chrVIII:237615-238152 ( 79) TAGCTCAGTTGGGAGAGCGCC 1 chrIV:1095097-1095715 ( 78) TAGCTCAGTTGGGAGAGCGCC 1 chrXIII:480368-480934 ( 65) TGGCGCAATCGGTAGCGCGTA 1 chrX:414690-415313 ( 22) TGGCGCAATCGGTAGCGCGTA 1 chrVII:876151-876743 ( 4) TGGCGCAATCGGTAGCGCGTA 1 chrVI:226545-226967 ( 27) TGGCGCAATCGGTAGCGCGTA 1 chrV:435583-436067 ( 22) TGGCGCAATCGGTAGCGCGTA 1 chrV:135159-135728 ( 77) TGGCGCAATCGGTAGCGCGTA 1 chrIV:1352346-1352762 ( 7) TGGCGCAATCGGTAGCGCGTA 1 chrXII:605148-605649 ( 57) TAGCTCAGTGGTTAGAGCTTC 1 chrIV:884176-884652 ( 4) TAGCTCAGTGGTTAGAGCTTC 1 chrXVI:860116-860670 ( 43) TGGTTTAGTGGTAAAATCCAA 1 chrXVI:572020-572628 ( 2) TGGTTTAGTGGTAAAATCCAA 1 chrXV:976173-976725 ( 29) TAGCTCAGTAGGAAGAGCGTC 1 chrXV:226443-226924 ( 21) TGGTTTAGTGGTAAAATCCAA 1 chrXIII:183753-184184 ( 23) TGGTTTAGTGGTAAAATCCAA 1 chrX:531479-532220 ( 36) TGGTTTAGTGGTAAAATCCAA 1 chrX:422576-423357 ( 28) TAGCTCAGTAGGAAGAGCGTC 1 chrX:390866-391309 ( 51) TAGCTCAGTAGGAAGAGCGTC 1 chrVII:930737-931242 ( 57) TGGTTTAGTGGTAAAATCCAA 1 chrVI:161990-162457 ( 62) TGGTTTAGTGGTAAAATCCAA 1 chrIV:992581-993086 ( 56) TGGTTTAGTGGTAAAATCCAA 1 chrIV:83285-83820 ( 53) TGGTTTAGTGGTAAAATCCAA 1 chrXV:464211-464752 ( 26) TGGTCTAGTGGTATGATTCTC 1 chrXV:300836-301409 ( 32) TGGTCTAGTGGTATGATTCTC 1 chrXIII:195892-196406 ( 44) TGGTCTAGTGGTATGATTCTC 1 chrVIII:388668-389238 ( 65) TGGTCTAGTGGTATGATTCTC 1 chrVI:101092-101665 ( 55) TGGTCTAGTGGTATGATTCTC 1 chrI:138890-139383 ( 73) TGGTCTAGTGGTATGATTCTC 1 chrXV:287988-288391 ( 60) TAGCCAAGTTGGTTTAAGGCG 1 chrXIII:837668-838297 ( 3) TAGCCAAGTTGGTTTAAGGCG 1 chrXIII:168564-169069 ( 36) TAGCCAAGTTGGTTTAAGGCG 1 chrVI:210445-210905 ( 55) TAGCCAAGTTGGTTTAAGGCG 1 chrVI:167256-167689 ( 22) TAGCCAAGTTGGTTTAAGGCG 1 chrXI:0-1067 ( 73) TGCCTCAGCGGTTTATACCCT 1 chrIV:619685-620349 ( 47) TGGCCCAATGGTCACGGCGTC 1 chrXI:665468-666798 ( 52) TGCCTCAGCGGTCTATACCCT 1 chrX:745246-745735 ( 7) TAGTGGAGTTGGATATGGGTA 1 chrIX:438806-439887 ( 3) TGCCTCAGCGGTCTATACCCT 1 chrIV:1524123-1525661 ( 14) TGCCTCAGCGGTCTATACCCT 1 chrIV:1256840-1257308 ( 28) TGGTTCAGTGGTTAGAATTCA 1 chrI:229147-230194 ( 24) TGCCTCAGCGGTCTATACCCT 1 chrI:5-1113 ( 41) TGCCTCAGCGGTCTATACCCT 1 chrXIV:95997-96669 ( 2) TAGTGTAGTGGTTATCATCCC 1 chrVII:779342-779945 ( 30) TAGTGTAGTGGTTATCATCCC 1 chrXII:489294-489543 ( 30) TAGTTAAGCTGGTAAGAGCCT 1 chrXII:468733-468983 ( 54) TAGTTAAGCTGGTAAGAGCCT 1 chrV:130834-131417 ( 51) TAGTGTAGTGGTTATCACTTT 1 chrIV:520708-521232 ( 59) TAGTGTAGTGGTTATCACTTT 1 chrIII:168073-168633 ( 42) TAGTGTAGTGGTTATCACTTT 1 chrII:350586-351127 ( 28) TAGTGTAGTGGTTATCACTTT 1 chrI:142063-143688 ( 45) TGGCTTAGCTGGCTTAGCAGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGCYYAGTKGKTWRAGSSHH MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 46640 bayes= 9.97803 E= 1.2e-256 -1333 -1333 -1333 166 -45 -1333 207 -1333 -1333 -165 237 -1333 -1333 190 -1333 1 -1333 144 29 -17 -103 85 -15 14 166 -1333 -1333 -1333 -203 -1333 234 -1333 -1333 -77 -1333 149 -344 16 132 -3 -1333 -1333 245 -1333 -1333 -1333 157 52 -78 -53 -223 104 83 -1333 -1333 46 80 -423 81 -145 61 23 -23 -112 -71 -1333 185 -112 -1333 167 85 -186 -503 144 123 -222 -8 85 -53 -39 -51 77 -91 22 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGCYYAGTKGKTWRAGSSHH MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 103 E= 1.2e-256 0.000000 0.000000 0.000000 1.000000 0.233010 0.000000 0.766990 0.000000 0.000000 0.058252 0.941748 0.000000 0.000000 0.679612 0.000000 0.320388 0.000000 0.495146 0.223301 0.281553 0.155340 0.330097 0.165049 0.349515 1.000000 0.000000 0.000000 0.000000 0.077670 0.000000 0.922330 0.000000 0.000000 0.106796 0.000000 0.893204 0.029126 0.203883 0.456311 0.310680 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.543689 0.456311 0.184466 0.126214 0.038835 0.650485 0.563107 0.000000 0.000000 0.436893 0.553398 0.009709 0.320388 0.116505 0.485437 0.213592 0.155340 0.145631 0.194175 0.000000 0.660194 0.145631 0.000000 0.582524 0.330097 0.087379 0.009709 0.495146 0.427184 0.067961 0.300971 0.330097 0.126214 0.242718 0.223301 0.310680 0.097087 0.368932 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGCYYAGTKGKTWRAGSSHH MEME-2 regular expression -------------------------------------------------------------------------------- T[GA]G[CT][CTG][TC]AGT[GTC]G[GT]T[AT][AG][AC]G[CG][CG][CAT][TCA] -------------------------------------------------------------------------------- Time 630.82 secs. ******************************************************************************** ******************************************************************************** MOTIF CACCCATRCAYCDCA MEME-3 width = 15 sites = 85 llr = 997 E-value = 3.6e-098 ******************************************************************************** -------------------------------------------------------------------------------- Motif CACCCATRCAYCDCA MEME-3 Description -------------------------------------------------------------------------------- Simplified A 29:::717:9:1415 pos.-specific C 8:8aa:2:a167262 probability G 11:::313::::212 matrix T ::2:::6:::42221 bits 2.5 * * 2.2 ** * 2.0 ** * 1.7 ** * Relative 1.5 *** * Entropy 1.2 * *** *** (16.9 bits) 1.0 ****** ***** 0.7 ****** ***** 0.5 ************ * 0.2 ************ ** 0.0 --------------- Multilevel CACCCATACACCACA consensus GCG T TTG sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCCATRCAYCDCA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chrX:545469-545698 - 21 3.68e-10 AAAAGACAGC CACCCATGCACCGCA CTCGCACGTG chrVII:371209-371473 + 65 3.68e-09 AAAATACCGG CACCCATGCACCTCA CACCGCCGCA chrXIII:5320-5762 + 53 4.46e-09 TATACACCCA CACCCACACACCACA CCCACACCCA chrXII:11011-11565 + 32 4.46e-09 ACACACACCA CACCCACACACCACA CCCACACCCA chrXII:5466-5914 + 27 4.46e-09 ATATACACCA CACCCACACACCACA CCCACACCAC chrVIII:562281-562579 - 83 4.46e-09 CCA CACCCACACACCACA CCCACACTTT chrX:690591-690837 + 52 9.00e-09 GTCATCAACA CACCCGTACACCACC ATGTGCGTTA chrIV:1062766-1063085 - 79 1.61e-08 TAAATAG CACCCACACATCGCA TGATGGCAGG chrV:110493-110847 + 59 3.50e-08 GTGACAAACA CACCCAGACACCTCA ATAGACAACA chrVII:856733-856970 - 60 4.25e-08 TGAGGGTACC CGCCCATACACCGCA CCAATGGAAC chrIV:525051-525348 - 51 4.78e-08 ATTTTCACAA CACCCATACACTACA CCAAAAATAT chrXVI:866438-866750 - 41 5.70e-08 AACGGAAATA CACCCATACACCAAA CCTCTGTGAA chrIV:538951-539213 + 74 5.70e-08 TGAATTATCA CACCCACACCCCTCA TTCAATCCTT chrIV:125341-125596 - 57 5.70e-08 TGGGAACTTG AACCCATACACCGCA CCAAATTATT chrXII:1028196-1028600 + 51 6.76e-08 GACAAAATAT CACCCATGCACCAAA ATGTATGGGT chrVI:95459-95846 - 31 6.76e-08 ATCAGTCATG CACCCACACACCGGA CTGCGTATAG chrXII:903397-903674 + 38 9.53e-08 AGAAGCATTG GACCCATGCACCACA TGCATTAGGA chrV:13283-13584 + 51 9.53e-08 AAGGAAATGA CACCCATACCTCTCA GAAATCCAAT chrV:6137-6642 + 11 9.53e-08 CCCACACCCA CACCCACACACCATG CTCACCTTCA chrVII:291553-291985 + 78 1.72e-07 CATGTTAAAG AACCCACACACCACA CGCGCGAG chrII:181309-181648 + 68 1.72e-07 CTTTACAAAG CACCCATACATTACA TTGAATACAT chrXV:968059-968431 - 71 2.00e-07 GAGCAGCGCA CGCCCACGCACCCCA CGCTTTTGAG chrIV:1259583-1259918 - 31 3.03e-07 ACCAGAAGGA AACCCATGCACCTCC ATGATGAAAT chrI:81882-82288 - 72 3.41e-07 ACTGTTGGTA CATCCGTGCACCTCC GCTAGATGAG chrXV:167945-168491 + 40 3.84e-07 TGTTTAAAGC CGCCCACACATCACA TTGAGAACGA chrIV:411216-411671 + 43 4.88e-07 ACAAATCAAA CACCCACACCCCGGG CACCCAAAGT chrXV:970988-971165 + 56 5.50e-07 CTTACCACCA CACCCACACACATCA GAAGAAAACT chrXIII:302826-303126 - 36 5.50e-07 CGCATATGGG CGCCCACACCCCACA CCCCTGGATT chrX:703256-703656 - 42 5.50e-07 CGCGTGGAAG CACCCATGCATCCAC TATTTATTTT chrXVI:520135-520582 + 57 6.20e-07 CTGAGTGTTC CACCCAGGCCTCGCC GGAGGAAAAT chrX:90012-90453 + 80 6.20e-07 TGGACATTCT CACCCATACATGGCC TTGTTT chrIX:382157-382399 - 55 6.20e-07 AACGGTACCG CACCCACACATTACC GAAAGCGCTC chrV:270326-270740 + 5 6.82e-07 TTAT CACCCATACATACCA CTAAATGTGT chrXV:216248-216669 + 68 7.70e-07 CGCCTTCCTC AACCCAGGCACCGCC CCCAGGTAAC chrVII:884170-884486 + 34 9.52e-07 ATAAACTGTT CACCCAGACACCTAC GATGTTATAT chrII:165057-165436 + 62 1.08e-06 TTACGAATCT AGCCCATACACCGCG TTAGAGCACT chrXV:882152-882389 + 79 1.19e-06 CCTATAAAAA CACCTGTGCACCGCA TATTTCC chrXI:67790-68058 + 40 1.19e-06 CCCGTGCTGA AATCCGTGCACCGCA TCAAATTTTC chrXI:382196-382472 + 22 1.33e-06 GCTGCTGTTG CATCCGGACATCACA CCCAACACAA chrXIV:499176-499731 - 27 1.49e-06 TTGGAAACAA CACCAGTGCACCACA TGAGTTTACA chrXII:651004-651265 + 57 1.64e-06 ATTATCTCAA CACCCACACATTTCT CATGGTAGCG chrX:391831-392089 + 85 1.64e-06 ACACGCCCCA CACCCAGACCTCCCT G chrIV:358082-358456 - 27 1.64e-06 GTGTACACAC CACCCATACATTATC TGACAAGGAA chrVIII:175058-175384 + 12 1.84e-06 GCAATGCTGA GACCCATACATCATG AAACTCCTTC chrXV:161075-161494 - 9 2.04e-06 CTGGCAACCA AACCCATACATCGGG ATTCCTAT chrXII:370620-370929 - 59 2.04e-06 GCACTTCGCC CACCCATGAACCACA CGGTTAGTCC chrVII:1000327-1000607 + 42 2.04e-06 ACTAGGATAG CACCCAAACACCTGC ATATTTGGAC chrIX:254229-254555 - 13 2.04e-06 CGAGCTTCCG CACCCACACATTCTA ATTGCCGCGC chrXVI:699905-700700 + 9 2.25e-06 CTTCAAAA CACCCAAGCACAGCA TACTAAATTT chrVIII:505786-506253 - 29 2.25e-06 GACAATTATG CATCCATACATTTCA CCCAGACATT chrIII:58699-58977 + 84 2.25e-06 TGCGTGGGTA CATCCGTGCACCATT TC chrXVI:135434-135843 - 35 2.51e-06 AGACTGCTAA AATCCGTGCACCCCG TAAAGTATGC chrVII:807783-808129 + 19 2.51e-06 AGGGCATGGG GACCCATACATCAGG CACTTACCCC chrVIII:353339-353669 - 11 2.75e-06 AAACACCGTA CACCCAAGCATTGCG ACTGAGAAGA chrVIII:296827-297261 + 64 3.04e-06 CAATTTCGTC CACCAGTACATCACA GCATGCTCTC chrIV:392529-392755 - 65 3.04e-06 ATAATAATGA CACCCATGCATAGTG ATGATAATGA chrIV:307400-308907 - 35 3.66e-06 TCAGAAAAAA CACCCATACATGTTG AAAAATAATG chrXIII:754392-754836 - 5 4.04e-06 ACATAAAATA CCCCCATACATCCAG AATA chrIV:1278701-1278933 - 10 4.04e-06 TCTCCGCAGG CATCCGTGCATGGCA TCCCGCGGA chrXV:79734-80155 - 51 4.41e-06 TCCATGTAAA CACCCGTACATATTA AATAAGTGAC chrXIII:797916-798156 + 59 4.41e-06 TTTCCGTTAC CCGCCGTGCACCACA GCATCGCTGC chrXVI:302545-303059 + 78 4.78e-06 CTAACTTGTA CATCCAGACATCCTA AAACACCC chrXVI:188594-189026 + 31 4.78e-06 TGACTTTTAA AACCCATGCATCGGT TACTATGGTT chrIV:1300908-1301360 + 26 4.78e-06 TTCCTTCAAA CATCCGTGCACTGTG GATGTTTGGG chrXVI:280682-282785 + 84 5.25e-06 TACCTCTTTA CACCCTTACACTTCC TT chrXV:558700-559018 + 30 5.25e-06 TTAGACTATG AACCCATACCCCATT TACATAATTA chrXIII:433531-433787 + 79 5.25e-06 CTTTGAAACG CACCCACGCATTTGC TAAAGAA chrXIII:549872-553223 - 28 6.18e-06 GTACATTACG CACCCATACATTTAT AGTTTTTAAA chrIV:1355679-1356056 - 19 6.18e-06 GTTAAAATTA CACCCATACATTTAT AGTATTTTTT chrXII:932070-932532 - 13 6.74e-06 TACATCCGTA CATCCGTACATCCGT ACATCTGTAC chrXII:795900-797439 - 12 7.29e-06 CTATCTTTTG CATCCGTGCCTCCTG GATAATAACT chrXVI:731886-732361 + 32 7.96e-06 ATCGTCAGTA CACCCATACCTTTAG GATGGTTGGA chrXV:1003810-1004674 - 52 9.31e-06 AAAAAAAAAA CACCCTTGCACCCAT AACATACGGC chrII:44940-45381 + 61 9.31e-06 GACAATCATG CATCCGTACATTCTA TGTATGTTTG chrIV:1256840-1257308 + 2 1.09e-05 G AACCCGGGCCCCATG CTTGGGAAGC chrXII:48679-49130 - 46 1.28e-05 TCCCAATGAA GATCCGTACATCTTA GACACCCTTT chrXIV:444400-444850 - 43 1.38e-05 CTACGGTCTC CATCCGTACCTCTTT AAATCCGTAC chrXII:39454-39868 - 21 1.38e-05 TAGATTTAAG GTCCCGTACACCCCG GCTAGTGGGC chrVII:479161-482988 + 40 1.61e-05 TCTCTTGGTG GATCCATACATGGCA TAACACCCAA chrXII:198657-199630 - 9 1.73e-05 ATGGCAACAG CCCCCGAACCCCATA TACACATC chrXII:424165-424455 - 63 1.87e-05 ATACCCGCAA GGGCCGTGCACCACA GCAATGTACG chrIV:321613-321998 + 45 2.00e-05 CATACCTTTA CCTCCGTACACCAAT CTTTATTTTT chrXVI:340562-340785 + 36 2.64e-05 ATGGCAATGA AAGCCGTGCACCCAG AAACAAACGG chrXIV:241361-241759 + 54 3.22e-05 CAACATCCAG CACCTAAACACCATC AATACACGTT chrX:651186-651636 + 86 3.91e-05 AATTATTCTT AACCCATACATATTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCCATRCAYCDCA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:545469-545698 3.7e-10 20_[-3]_65 chrVII:371209-371473 3.7e-09 64_[+3]_21 chrXIII:5320-5762 4.5e-09 52_[+3]_33 chrXII:11011-11565 4.5e-09 31_[+3]_54 chrXII:5466-5914 4.5e-09 26_[+3]_59 chrVIII:562281-562579 4.5e-09 82_[-3]_3 chrX:690591-690837 9e-09 51_[+3]_34 chrIV:1062766-1063085 1.6e-08 78_[-3]_7 chrV:110493-110847 3.5e-08 58_[+3]_27 chrVII:856733-856970 4.2e-08 59_[-3]_26 chrIV:525051-525348 4.8e-08 50_[-3]_35 chrXVI:866438-866750 5.7e-08 40_[-3]_45 chrIV:538951-539213 5.7e-08 73_[+3]_12 chrIV:125341-125596 5.7e-08 56_[-3]_29 chrXII:1028196-1028600 6.8e-08 50_[+3]_35 chrVI:95459-95846 6.8e-08 30_[-3]_55 chrXII:903397-903674 9.5e-08 37_[+3]_48 chrV:13283-13584 9.5e-08 50_[+3]_35 chrV:6137-6642 9.5e-08 10_[+3]_75 chrVII:291553-291985 1.7e-07 77_[+3]_8 chrII:181309-181648 1.7e-07 67_[+3]_18 chrXV:968059-968431 2e-07 70_[-3]_15 chrIV:1259583-1259918 3e-07 30_[-3]_55 chrI:81882-82288 3.4e-07 71_[-3]_14 chrXV:167945-168491 3.8e-07 39_[+3]_46 chrIV:411216-411671 4.9e-07 42_[+3]_43 chrXV:970988-971165 5.5e-07 55_[+3]_30 chrXIII:302826-303126 5.5e-07 35_[-3]_50 chrX:703256-703656 5.5e-07 41_[-3]_44 chrXVI:520135-520582 6.2e-07 56_[+3]_29 chrX:90012-90453 6.2e-07 79_[+3]_6 chrIX:382157-382399 6.2e-07 54_[-3]_31 chrV:270326-270740 6.8e-07 4_[+3]_81 chrXV:216248-216669 7.7e-07 67_[+3]_18 chrVII:884170-884486 9.5e-07 33_[+3]_52 chrII:165057-165436 1.1e-06 61_[+3]_24 chrXV:882152-882389 1.2e-06 78_[+3]_7 chrXI:67790-68058 1.2e-06 39_[+3]_46 chrXI:382196-382472 1.3e-06 21_[+3]_64 chrXIV:499176-499731 1.5e-06 26_[-3]_59 chrXII:651004-651265 1.6e-06 56_[+3]_29 chrX:391831-392089 1.6e-06 84_[+3]_1 chrIV:358082-358456 1.6e-06 26_[-3]_59 chrVIII:175058-175384 1.8e-06 11_[+3]_74 chrXV:161075-161494 2e-06 8_[-3]_77 chrXII:370620-370929 2e-06 58_[-3]_27 chrVII:1000327-1000607 2e-06 41_[+3]_44 chrIX:254229-254555 2e-06 12_[-3]_73 chrXVI:699905-700700 2.2e-06 8_[+3]_77 chrVIII:505786-506253 2.2e-06 28_[-3]_57 chrIII:58699-58977 2.2e-06 83_[+3]_2 chrXVI:135434-135843 2.5e-06 34_[-3]_51 chrVII:807783-808129 2.5e-06 18_[+3]_67 chrVIII:353339-353669 2.7e-06 10_[-3]_75 chrVIII:296827-297261 3e-06 63_[+3]_22 chrIV:392529-392755 3e-06 64_[-3]_21 chrIV:307400-308907 3.7e-06 34_[-3]_51 chrXIII:754392-754836 4e-06 4_[-3]_81 chrIV:1278701-1278933 4e-06 9_[-3]_76 chrXV:79734-80155 4.4e-06 50_[-3]_35 chrXIII:797916-798156 4.4e-06 58_[+3]_27 chrXVI:302545-303059 4.8e-06 77_[+3]_8 chrXVI:188594-189026 4.8e-06 30_[+3]_55 chrIV:1300908-1301360 4.8e-06 25_[+3]_60 chrXVI:280682-282785 5.2e-06 83_[+3]_2 chrXV:558700-559018 5.2e-06 29_[+3]_56 chrXIII:433531-433787 5.2e-06 78_[+3]_7 chrXIII:549872-553223 6.2e-06 27_[-3]_58 chrIV:1355679-1356056 6.2e-06 18_[-3]_67 chrXII:932070-932532 6.7e-06 12_[-3]_73 chrXII:795900-797439 7.3e-06 11_[-3]_74 chrXVI:731886-732361 8e-06 31_[+3]_54 chrXV:1003810-1004674 9.3e-06 51_[-3]_34 chrII:44940-45381 9.3e-06 60_[+3]_25 chrIV:1256840-1257308 1.1e-05 1_[+3]_84 chrXII:48679-49130 1.3e-05 45_[-3]_40 chrXIV:444400-444850 1.4e-05 42_[-3]_43 chrXII:39454-39868 1.4e-05 20_[-3]_65 chrVII:479161-482988 1.6e-05 39_[+3]_46 chrXII:198657-199630 1.7e-05 8_[-3]_77 chrXII:424165-424455 1.9e-05 62_[-3]_23 chrIV:321613-321998 2e-05 44_[+3]_41 chrXVI:340562-340785 2.6e-05 35_[+3]_50 chrXIV:241361-241759 3.2e-05 53_[+3]_32 chrX:651186-651636 3.9e-05 85_[+3] -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCCATRCAYCDCA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CACCCATRCAYCDCA width=15 seqs=85 chrX:545469-545698 ( 21) CACCCATGCACCGCA 1 chrVII:371209-371473 ( 65) CACCCATGCACCTCA 1 chrXIII:5320-5762 ( 53) CACCCACACACCACA 1 chrXII:11011-11565 ( 32) CACCCACACACCACA 1 chrXII:5466-5914 ( 27) CACCCACACACCACA 1 chrVIII:562281-562579 ( 83) CACCCACACACCACA 1 chrX:690591-690837 ( 52) CACCCGTACACCACC 1 chrIV:1062766-1063085 ( 79) CACCCACACATCGCA 1 chrV:110493-110847 ( 59) CACCCAGACACCTCA 1 chrVII:856733-856970 ( 60) CGCCCATACACCGCA 1 chrIV:525051-525348 ( 51) CACCCATACACTACA 1 chrXVI:866438-866750 ( 41) CACCCATACACCAAA 1 chrIV:538951-539213 ( 74) CACCCACACCCCTCA 1 chrIV:125341-125596 ( 57) AACCCATACACCGCA 1 chrXII:1028196-1028600 ( 51) CACCCATGCACCAAA 1 chrVI:95459-95846 ( 31) CACCCACACACCGGA 1 chrXII:903397-903674 ( 38) GACCCATGCACCACA 1 chrV:13283-13584 ( 51) CACCCATACCTCTCA 1 chrV:6137-6642 ( 11) CACCCACACACCATG 1 chrVII:291553-291985 ( 78) AACCCACACACCACA 1 chrII:181309-181648 ( 68) CACCCATACATTACA 1 chrXV:968059-968431 ( 71) CGCCCACGCACCCCA 1 chrIV:1259583-1259918 ( 31) AACCCATGCACCTCC 1 chrI:81882-82288 ( 72) CATCCGTGCACCTCC 1 chrXV:167945-168491 ( 40) CGCCCACACATCACA 1 chrIV:411216-411671 ( 43) CACCCACACCCCGGG 1 chrXV:970988-971165 ( 56) CACCCACACACATCA 1 chrXIII:302826-303126 ( 36) CGCCCACACCCCACA 1 chrX:703256-703656 ( 42) CACCCATGCATCCAC 1 chrXVI:520135-520582 ( 57) CACCCAGGCCTCGCC 1 chrX:90012-90453 ( 80) CACCCATACATGGCC 1 chrIX:382157-382399 ( 55) CACCCACACATTACC 1 chrV:270326-270740 ( 5) CACCCATACATACCA 1 chrXV:216248-216669 ( 68) AACCCAGGCACCGCC 1 chrVII:884170-884486 ( 34) CACCCAGACACCTAC 1 chrII:165057-165436 ( 62) AGCCCATACACCGCG 1 chrXV:882152-882389 ( 79) CACCTGTGCACCGCA 1 chrXI:67790-68058 ( 40) AATCCGTGCACCGCA 1 chrXI:382196-382472 ( 22) CATCCGGACATCACA 1 chrXIV:499176-499731 ( 27) CACCAGTGCACCACA 1 chrXII:651004-651265 ( 57) CACCCACACATTTCT 1 chrX:391831-392089 ( 85) CACCCAGACCTCCCT 1 chrIV:358082-358456 ( 27) CACCCATACATTATC 1 chrVIII:175058-175384 ( 12) GACCCATACATCATG 1 chrXV:161075-161494 ( 9) AACCCATACATCGGG 1 chrXII:370620-370929 ( 59) CACCCATGAACCACA 1 chrVII:1000327-1000607 ( 42) CACCCAAACACCTGC 1 chrIX:254229-254555 ( 13) CACCCACACATTCTA 1 chrXVI:699905-700700 ( 9) CACCCAAGCACAGCA 1 chrVIII:505786-506253 ( 29) CATCCATACATTTCA 1 chrIII:58699-58977 ( 84) CATCCGTGCACCATT 1 chrXVI:135434-135843 ( 35) AATCCGTGCACCCCG 1 chrVII:807783-808129 ( 19) GACCCATACATCAGG 1 chrVIII:353339-353669 ( 11) CACCCAAGCATTGCG 1 chrVIII:296827-297261 ( 64) CACCAGTACATCACA 1 chrIV:392529-392755 ( 65) CACCCATGCATAGTG 1 chrIV:307400-308907 ( 35) CACCCATACATGTTG 1 chrXIII:754392-754836 ( 5) CCCCCATACATCCAG 1 chrIV:1278701-1278933 ( 10) CATCCGTGCATGGCA 1 chrXV:79734-80155 ( 51) CACCCGTACATATTA 1 chrXIII:797916-798156 ( 59) CCGCCGTGCACCACA 1 chrXVI:302545-303059 ( 78) CATCCAGACATCCTA 1 chrXVI:188594-189026 ( 31) AACCCATGCATCGGT 1 chrIV:1300908-1301360 ( 26) CATCCGTGCACTGTG 1 chrXVI:280682-282785 ( 84) CACCCTTACACTTCC 1 chrXV:558700-559018 ( 30) AACCCATACCCCATT 1 chrXIII:433531-433787 ( 79) CACCCACGCATTTGC 1 chrXIII:549872-553223 ( 28) CACCCATACATTTAT 1 chrIV:1355679-1356056 ( 19) CACCCATACATTTAT 1 chrXII:932070-932532 ( 13) CATCCGTACATCCGT 1 chrXII:795900-797439 ( 12) CATCCGTGCCTCCTG 1 chrXVI:731886-732361 ( 32) CACCCATACCTTTAG 1 chrXV:1003810-1004674 ( 52) CACCCTTGCACCCAT 1 chrII:44940-45381 ( 61) CATCCGTACATTCTA 1 chrIV:1256840-1257308 ( 2) AACCCGGGCCCCATG 1 chrXII:48679-49130 ( 46) GATCCGTACATCTTA 1 chrXIV:444400-444850 ( 43) CATCCGTACCTCTTT 1 chrXII:39454-39868 ( 21) GTCCCGTACACCCCG 1 chrVII:479161-482988 ( 40) GATCCATACATGGCA 1 chrXII:198657-199630 ( 9) CCCCCGAACCCCATA 1 chrXII:424165-424455 ( 63) GGGCCGTGCACCACA 1 chrIV:321613-321998 ( 45) CCTCCGTACACCAAT 1 chrXVI:340562-340785 ( 36) AAGCCGTGCACCCAG 1 chrXIV:241361-241759 ( 54) CACCTAAACACCATC 1 chrX:651186-651636 ( 86) AACCCATACATATTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCCATRCAYCDCA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 50138 bayes= 10.1996 E= 3.6e-098 -105 207 -115 -1305 146 -196 -137 -475 -1305 209 -237 -75 -1305 245 -1305 -1305 -375 238 -1305 -375 113 -1305 63 -375 -243 21 -96 100 105 -1305 90 -1305 -475 244 -1305 -1305 144 -37 -1305 -1305 -1305 160 -1305 49 -217 195 -196 -85 15 -15 36 -36 -129 160 -96 -51 64 -15 13 -117 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCCATRCAYCDCA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 85 E= 3.6e-098 0.152941 0.764706 0.082353 0.000000 0.870588 0.047059 0.070588 0.011765 0.000000 0.776471 0.035294 0.188235 0.000000 1.000000 0.000000 0.000000 0.023529 0.952941 0.000000 0.023529 0.694118 0.000000 0.282353 0.023529 0.058824 0.211765 0.094118 0.635294 0.658824 0.000000 0.341176 0.000000 0.011765 0.988235 0.000000 0.000000 0.858824 0.141176 0.000000 0.000000 0.000000 0.552941 0.000000 0.447059 0.070588 0.705882 0.047059 0.176471 0.352941 0.164706 0.235294 0.247059 0.129412 0.552941 0.094118 0.223529 0.494118 0.164706 0.200000 0.141176 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACCCATRCAYCDCA MEME-3 regular expression -------------------------------------------------------------------------------- CACCC[AG][TC][AG]CA[CT]C[ATG][CT][AG] -------------------------------------------------------------------------------- Time 916.39 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrI:5-1113 1.18e-03 40_[+2(1.54e-06)]_39 chrI:81882-82288 5.82e-04 71_[-3(3.41e-07)]_14 chrI:138890-139383 8.76e-04 72_[+2(6.03e-07)]_7 chrI:142063-143688 1.65e-02 44_[-2(4.40e-06)]_35 chrI:166024-166629 8.56e-07 32_[+1(4.95e-11)]_47 chrI:180939-181525 2.59e-03 41_[+1(1.39e-06)]_38 chrI:182341-182782 1.01e-09 20_[-1(2.88e-07)]_23_[-2(9.42e-10)]_\ 15 chrI:229147-230194 1.27e-03 23_[-2(1.54e-06)]_56 chrII:9341-9919 1.84e-08 9_[+2(1.23e-08)]_25_[+1(4.86e-07)]_\ 24 chrII:36150-36595 3.90e-01 100 chrII:44940-45381 1.46e-02 60_[+3(9.31e-06)]_25 chrII:60126-61351 4.23e-02 63_[-3(9.40e-05)]_22 chrII:81601-82712 1.73e-01 100 chrII:87958-88584 8.70e-01 100 chrII:88948-89990 7.46e-01 100 chrII:159824-160015 3.89e-01 100 chrII:165057-165436 3.86e-04 61_[+3(1.08e-06)]_24 chrII:167742-168491 1.97e-01 100 chrII:181309-181648 1.39e-03 67_[+3(1.72e-07)]_18 chrII:197210-197873 7.80e-14 9_[+2(1.12e-10)]_15_[+1(5.96e-11)]_\ 34 chrII:226840-227782 6.50e-01 100 chrII:266131-266699 1.22e-11 19_[+2(3.48e-10)]_14_[+1(5.62e-09)]_\ 25 chrII:326532-327250 4.22e-02 100 chrII:332257-333422 2.95e-01 100 chrII:347398-347937 1.74e-03 38_[+1(4.86e-07)]_41 chrII:350586-351127 1.09e-08 27_[+2(3.97e-06)]_13_[+1(2.00e-09)]_\ 18 chrII:405549-406260 8.44e-06 64_[+1(3.40e-09)]_15 chrII:414660-415907 8.06e-01 100 chrII:476866-477770 6.45e-01 100 chrII:504500-504742 9.43e-02 100 chrII:544478-544838 2.07e-01 100 chrII:592347-593331 6.92e-01 100 chrII:604073-607128 8.40e-01 100 chrII:642906-643269 8.19e-01 100 chrII:644951-645478 1.61e-07 43_[+1(1.04e-10)]_36 chrII:680907-682180 9.93e-01 100 chrII:812985-813183 1.55e-01 100 chrIII:2-1472 6.16e-01 100 chrIII:11082-11558 3.37e-01 100 chrIII:13989-16557 9.45e-01 100 chrIII:29526-31608 9.70e-01 100 chrIII:58699-58977 6.31e-03 83_[+3(2.25e-06)]_2 chrIII:82236-82748 1.61e-07 29_[-1(1.04e-10)]_50 chrIII:107251-107762 6.46e-01 100 chrIII:123363-123838 2.88e-12 36_[-1(2.80e-13)]_13_[-2(4.37e-05)]_\ 9 chrIII:127516-127927 1.43e-05 51_[+2(3.76e-09)]_28 chrIII:142151-143055 7.04e-01 100 chrIII:162051-163894 9.28e-01 100 chrIII:168073-168633 1.09e-08 7_[-1(2.00e-09)]_13_[-2(3.97e-06)]_\ 38 chrIII:177031-177599 7.61e-01 100 chrIII:177756-178850 5.42e-01 100 chrIII:227663-228206 1.08e-06 64_[+2(1.36e-09)]_15 chrIII:262720-263038 6.18e-01 100 chrIII:292312-293051 6.43e-01 100 chrIII:294574-295908 9.62e-01 100 chrIII:315627-316619 4.03e-01 100 chrIV:27-361 6.03e-02 100 chrIV:83285-83820 5.59e-04 52_[+2(3.09e-07)]_27 chrIV:116817-118216 4.76e-02 100 chrIV:118431-118876 9.90e-01 100 chrIV:125341-125596 7.26e-06 56_[-3(5.70e-08)]_29 chrIV:129941-131021 1.71e-01 100 chrIV:217093-218078 8.02e-01 100 chrIV:221116-222387 7.00e-01 100 chrIV:229421-230629 3.49e-01 100 chrIV:307400-308907 2.04e-02 34_[-3(3.66e-06)]_51 chrIV:321613-321998 5.34e-02 44_[+3(2.00e-05)]_11_[+3(5.64e-05)]_\ 15 chrIV:322227-323609 1.34e-01 100 chrIV:340183-341673 8.24e-01 100 chrIV:358082-358456 7.30e-03 26_[-3(1.64e-06)]_59 chrIV:359354-359886 1.22e-11 13_[+2(1.23e-08)]_37_[+1(1.74e-09)]_\ 8 chrIV:392529-392755 1.85e-02 64_[-3(3.04e-06)]_21 chrIV:410140-410721 1.29e-12 5_[+2(3.48e-10)]_14_[+1(3.41e-10)]_\ 39 chrIV:411216-411671 5.10e-04 42_[+3(4.88e-07)]_43 chrIV:427710-428700 7.74e-01 100 chrIV:433981-434605 1.58e-11 30_[-1(5.62e-09)]_14_[-2(3.48e-10)]_\ 14 chrIV:437490-438085 6.61e-06 41_[+2(9.42e-10)]_38 chrIV:465158-465763 7.61e-01 100 chrIV:488463-489161 3.42e-06 44_[-1(3.86e-09)]_35 chrIV:490492-492654 6.61e-01 100 chrIV:508169-509920 7.51e-02 100 chrIV:519536-520406 9.10e-01 100 chrIV:520708-521232 2.43e-03 58_[+2(3.97e-06)]_21 chrIV:525051-525348 6.37e-05 50_[-3(4.78e-08)]_35 chrIV:538951-539213 8.60e-06 73_[+3(5.70e-08)]_12 chrIV:541236-542082 7.00e-02 100 chrIV:568395-569339 6.64e-01 100 chrIV:579001-581090 6.27e-01 100 chrIV:619685-620349 2.92e-07 11_[-1(2.88e-07)]_14_[-2(8.20e-07)]_\ 33 chrIV:644919-645409 4.16e-06 48_[-1(2.00e-09)]_31 chrIV:667738-668264 6.07e-07 65_[-1(5.96e-11)]_14 chrIV:802392-803023 3.95e-02 76_[+1(5.73e-05)]_3 chrIV:835763-836337 7.88e-01 100 chrIV:884176-884652 9.75e-05 3_[+2(8.69e-08)]_76 chrIV:946137-946618 8.45e-05 42_[+1(2.22e-08)]_37 chrIV:980713-981278 1.35e-04 38_[-1(2.88e-07)]_41 chrIV:992581-993086 8.03e-04 55_[+2(3.09e-07)]_24 chrIV:1012638-1013983 8.88e-01 100 chrIV:1016952-1017536 1.23e-07 22_[-1(1.04e-10)]_57 chrIV:1062766-1063085 1.54e-04 78_[-3(1.61e-08)]_7 chrIV:1075277-1075789 1.29e-01 33_[-2(7.23e-05)]_46 chrIV:1095097-1095715 2.13e-09 23_[-1(1.60e-08)]_33_[-2(4.42e-08)]_\ 2 chrIV:1150547-1151173 4.94e-04 41_[-1(8.41e-07)]_38 chrIV:1151329-1151520 9.87e-01 100 chrIV:1175574-1176275 3.30e-01 100 chrIV:1201484-1202493 2.21e-01 100 chrIV:1236814-1238454 8.93e-01 100 chrIV:1256840-1257308 7.22e-06 1_[+3(1.09e-05)]_11_[-2(1.54e-06)]_\ 52 chrIV:1259583-1259918 1.48e-03 30_[-3(3.03e-07)]_55 chrIV:1278701-1278933 7.10e-03 9_[-3(4.04e-06)]_76 chrIV:1300908-1301360 9.45e-03 25_[+3(4.78e-06)]_60 chrIV:1305244-1305904 9.80e-01 100 chrIV:1306062-1306231 6.93e-01 100 chrIV:1352346-1352762 5.53e-04 6_[-2(6.99e-08)]_73 chrIV:1355679-1356056 1.66e-02 18_[-3(6.18e-06)]_9_[-3(1.18e-05)]_\ 43 chrIV:1359168-1361125 1.86e-01 100 chrIV:1401213-1401926 3.72e-01 100 chrIV:1449855-1451270 5.82e-02 100 chrIV:1461454-1462291 9.77e-01 100 chrIV:1488896-1489671 7.78e-01 100 chrIV:1524123-1525661 1.18e-03 13_[-2(1.54e-06)]_66 chrIX:1-229 5.82e-01 100 chrIX:68161-69683 9.83e-01 100 chrIX:98203-100084 6.13e-01 100 chrIX:131456-132331 3.47e-01 100 chrIX:174795-175390 4.23e-05 30_[+1(5.62e-09)]_49 chrIX:183071-183726 7.69e-01 100 chrIX:197002-197960 6.25e-01 100 chrIX:210485-210964 5.83e-07 33_[+1(5.96e-11)]_46 chrIX:231243-231671 6.74e-01 100 chrIX:232723-233042 1.73e-01 100 chrIX:248596-249395 3.01e-01 100 chrIX:254229-254555 2.48e-03 12_[-3(2.04e-06)]_73 chrIX:255429-258029 6.84e-01 100 chrIX:299979-300758 4.15e-01 100 chrIX:316099-317240 6.82e-01 100 chrIX:323957-324628 1.79e-03 70_[-1(3.62e-07)]_9 chrIX:325394-326141 1.58e-11 37_[+2(3.48e-10)]_14_[+1(5.62e-09)]_\ 7 chrIX:336116-336806 9.90e-01 100 chrIX:370211-370647 1.61e-07 78_[+1(1.04e-10)]_1 chrIX:382157-382399 2.52e-03 54_[-3(6.20e-07)]_31 chrIX:438806-439887 2.68e-03 2_[-2(1.54e-06)]_77 chrM:6599-6954 4.26e-01 100 chrM:58227-58953 3.06e-01 100 chrM:59551-60003 5.57e-01 100 chrM:60582-60930 8.27e-01 100 chrM:61087-61469 4.71e-01 100 chrV:6137-6642 8.76e-04 10_[+3(9.53e-08)]_75 chrV:13283-13584 1.88e-04 50_[+3(9.53e-08)]_35 chrV:51933-52843 8.38e-01 100 chrV:53510-54109 5.66e-01 100 chrV:61013-62184 3.65e-01 100 chrV:85137-85610 2.03e-01 100 chrV:85858-86944 2.45e-01 100 chrV:99826-100375 7.59e-01 100 chrV:110493-110847 8.48e-05 58_[+3(3.50e-08)]_27 chrV:117581-118361 7.12e-01 100 chrV:130834-131417 3.57e-08 16_[-1(5.62e-09)]_13_[-2(3.97e-06)]_\ 29 chrV:135159-135728 4.59e-11 41_[-1(3.99e-10)]_14_[-2(6.99e-08)]_\ 3 chrV:138396-140905 6.94e-01 100 chrV:176780-177454 1.61e-07 72_[+1(1.04e-10)]_7 chrV:206894-207690 1.17e-01 100 chrV:225412-225762 7.12e-01 100 chrV:250112-250757 4.72e-01 100 chrV:269195-270163 4.93e-01 100 chrV:270326-270740 5.32e-03 4_[+3(6.82e-07)]_24_[+3(7.56e-05)]_\ 42 chrV:288123-288762 4.34e-04 60_[-1(1.39e-06)]_19 chrV:305558-306896 5.66e-01 100 chrV:311759-312324 9.20e-14 41_[-1(4.95e-11)]_14_[-2(1.43e-10)]_\ 3 chrV:321928-323030 4.23e-01 100 chrV:354661-355450 1.11e-01 100 chrV:362097-362520 4.80e-01 100 chrV:396151-397950 4.90e-01 100 chrV:406678-409189 9.23e-01 100 chrV:423091-423923 9.91e-01 100 chrV:430969-431593 7.22e-02 100 chrV:434388-435218 6.24e-01 100 chrV:435583-436067 4.94e-04 21_[-2(6.99e-08)]_58 chrV:438181-438969 2.46e-01 100 chrV:441724-442641 5.10e-01 100 chrV:443019-443517 1.76e-06 29_[-2(1.12e-10)]_50 chrV:469233-469694 3.58e-05 50_[+2(2.11e-08)]_29 chrV:486878-487753 1.66e-06 75_[-1(1.04e-10)]_4 chrV:492145-492575 3.62e-04 51_[-1(2.88e-07)]_28 chrV:522603-522983 6.81e-01 100 chrV:551012-551684 1.09e-06 32_[-2(1.12e-10)]_47 chrVI:4709-5960 5.04e-01 100 chrVI:63999-65419 1.80e-01 100 chrVI:82474-84479 3.20e-01 100 chrVI:95459-95846 7.59e-05 30_[-3(6.76e-08)]_55 chrVI:101092-101665 9.13e-04 54_[+2(6.03e-07)]_25 chrVI:137166-137959 1.43e-05 19_[-2(3.76e-09)]_60 chrVI:157658-158226 2.76e-05 33_[-1(1.60e-08)]_46 chrVI:158417-158819 8.43e-01 100 chrVI:161990-162457 1.43e-03 61_[+2(3.09e-07)]_18 chrVI:167256-167689 2.99e-08 21_[+2(7.05e-07)]_30_[+1(2.22e-08)]_\ 7 chrVI:180640-181222 4.78e-01 100 chrVI:191300-191818 4.75e-10 13_[-1(8.41e-07)]_42_[-2(3.48e-10)]_\ 3 chrVI:204793-205230 8.06e-08 7_[-2(3.48e-10)]_72 chrVI:210445-210905 2.99e-08 3_[-1(2.22e-08)]_30_[-2(7.05e-07)]_\ 25 chrVI:221425-222090 8.95e-01 100 chrVI:223697-224171 6.85e-01 100 chrVI:226545-226967 6.06e-05 26_[-2(6.99e-08)]_53 chrVI:269154-270160 8.36e-02 100 chrVII:11-1998 7.70e-01 100 chrVII:9980-10592 3.99e-01 100 chrVII:67210-67628 9.03e-01 100 chrVII:73663-74392 9.90e-01 100 chrVII:110387-110970 4.41e-04 6_[-1(2.07e-06)]_73 chrVII:114985-115815 8.83e-01 100 chrVII:121978-122692 2.98e-07 25_[+1(3.99e-10)]_54 chrVII:148560-149605 3.48e-01 100 chrVII:185206-186073 8.16e-01 100 chrVII:205024-205770 7.33e-01 100 chrVII:228203-228853 3.46e-01 100 chrVII:254088-254718 9.49e-01 100 chrVII:276985-277896 5.49e-01 100 chrVII:287079-287668 2.43e-04 36_[-1(1.26e-07)]_43 chrVII:291553-291985 9.16e-04 77_[+3(1.72e-07)]_8 chrVII:310409-312434 8.70e-01 100 chrVII:319578-320345 1.71e-01 100 chrVII:328355-328969 4.94e-07 11_[+1(1.04e-10)]_68 chrVII:345869-346614 8.57e-02 100 chrVII:352307-352816 3.41e-02 74_[+1(5.54e-05)]_5 chrVII:364932-366768 8.02e-02 100 chrVII:371209-371473 3.11e-05 64_[+3(3.68e-09)]_21 chrVII:401327-401778 1.61e-07 34_[-1(1.04e-10)]_45 chrVII:405264-405806 1.39e-05 25_[+1(3.40e-09)]_54 chrVII:412114-412597 3.74e-05 34_[-2(2.11e-08)]_45 chrVII:422878-423504 3.44e-03 33_[+1(1.39e-06)]_46 chrVII:438538-439998 9.99e-01 100 chrVII:440274-442583 2.77e-01 100 chrVII:479161-482988 4.51e-03 39_[+3(1.61e-05)]_46 chrVII:531433-532496 9.63e-01 100 chrVII:533542-535235 8.96e-01 100 chrVII:541610-542194 1.61e-07 38_[+1(1.04e-10)]_41 chrVII:544376-546101 9.79e-01 100 chrVII:555136-558027 4.31e-01 100 chrVII:561151-561969 7.53e-01 100 chrVII:648837-649765 4.61e-02 12_[-2(4.51e-05)]_67 chrVII:661449-661975 6.80e-01 100 chrVII:700196-701274 1.66e-08 40_[+1(1.52e-09)]_39 chrVII:706935-707357 2.12e-03 21_[-1(9.57e-07)]_58 chrVII:726389-728309 2.71e-01 100 chrVII:730914-731449 7.10e-10 12_[+2(3.76e-09)]_15_[+1(5.02e-08)]_\ 31 chrVII:736181-736691 2.70e-01 100 chrVII:738872-739419 3.22e-14 33_[+2(1.12e-10)]_15_[+1(5.96e-11)]_\ 10 chrVII:773877-774627 9.93e-01 100 chrVII:779342-779945 7.53e-10 29_[+2(1.87e-06)]_13_[+1(2.09e-10)]_\ 16 chrVII:788130-788779 4.91e-01 100 chrVII:794120-794635 6.01e-01 100 chrVII:807783-808129 4.84e-03 18_[+3(2.51e-06)]_67 chrVII:823251-823725 3.06e-05 50_[+2(2.11e-08)]_29 chrVII:828256-829020 6.08e-01 100 chrVII:844997-845913 7.96e-01 100 chrVII:856733-856970 3.37e-05 59_[-3(4.25e-08)]_26 chrVII:857236-857641 9.54e-05 75_[-2(2.11e-08)]_4 chrVII:876151-876743 4.59e-11 3_[+2(6.99e-08)]_14_[+1(3.99e-10)]_\ 41 chrVII:878622-879323 2.21e-01 100 chrVII:882049-882212 5.92e-01 100 chrVII:882367-883969 4.94e-01 100 chrVII:884170-884486 4.88e-04 33_[+3(9.52e-07)]_36_[-3(9.31e-06)]_\ 1 chrVII:919860-920242 6.24e-02 71_[+3(7.56e-05)]_14 chrVII:930737-931242 4.53e-09 23_[-1(2.29e-09)]_12_[-2(3.09e-07)]_\ 23 chrVII:1000327-1000607 9.27e-04 41_[+3(2.04e-06)]_44 chrVII:1003976-1004422 1.46e-01 100 chrVII:1083463-1083858 3.26e-01 100 chrVIII:34448-36376 2.16e-02 11_[-2(3.61e-05)]_68 chrVIII:62529-63013 1.10e-04 74_[+1(2.07e-06)]_5 chrVIII:74907-75941 9.24e-01 100 chrVIII:85096-85582 5.17e-10 18_[-1(7.16e-09)]_15_[-2(2.11e-08)]_\ 25 chrVIII:103874-104761 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3.48e-03 55_[+3(5.50e-07)]_30 chrXV:976173-976725 2.67e-08 28_[+2(3.09e-07)]_14_[+1(2.00e-08)]_\ 16 chrXV:978812-979140 4.30e-02 100 chrXV:980480-981251 5.61e-01 100 chrXV:1003810-1004674 5.70e-03 51_[-3(9.31e-06)]_34 chrXV:1025336-1026134 2.28e-01 100 chrXV:1027824-1029159 9.57e-02 100 chrXV:1091125-1091290 6.95e-01 100 chrXVI:55836-56523 2.43e-04 49_[-1(1.26e-07)]_30 chrXVI:76146-76738 8.62e-02 100 chrXVI:135434-135843 9.50e-03 34_[-3(2.51e-06)]_51 chrXVI:172813-174095 8.31e-01 100 chrXVI:188594-189026 3.56e-03 30_[+3(4.78e-06)]_55 chrXVI:209955-210590 2.30e-01 100 chrXVI:280682-282785 1.82e-02 67_[+3(8.44e-05)]_1_[+3(5.25e-06)]_\ 2 chrXVI:302545-303059 7.49e-03 77_[+3(4.78e-06)]_8 chrXVI:338686-339150 5.93e-01 100 chrXVI:340562-340785 1.86e-02 35_[+3(2.64e-05)]_50 chrXVI:377866-379030 8.88e-01 100 chrXVI:406176-407943 2.98e-01 100 chrXVI:435224-436208 8.59e-01 100 chrXVI:520135-520582 5.99e-04 21_[-3(3.22e-05)]_20_[+3(6.20e-07)]_\ 29 chrXVI:559961-560528 3.77e-09 13_[-1(1.60e-08)]_33_[-2(4.42e-08)]_\ 12 chrXVI:572020-572628 1.73e-10 1_[+2(3.09e-07)]_12_[+1(2.29e-09)]_\ 45 chrXVI:581845-582415 1.22e-06 23_[+1(3.99e-10)]_56 chrXVI:622262-622872 2.76e-05 32_[-1(1.60e-08)]_47 chrXVI:653806-654704 4.92e-01 100 chrXVI:688873-689914 9.84e-01 100 chrXVI:699905-700700 1.03e-02 8_[+3(2.25e-06)]_77 chrXVI:701854-702394 2.15e-01 100 chrXVI:718482-719391 7.14e-01 100 chrXVI:731886-732361 9.50e-03 31_[+3(7.96e-06)]_54 chrXVI:743794-744797 3.40e-05 79_[+1(2.66e-07)] chrXVI:768922-769505 1.20e-06 53_[-1(1.74e-09)]_26 chrXVI:775649-776192 5.49e-01 100 chrXVI:794409-796100 9.80e-01 100 chrXVI:810440-811040 2.92e-04 28_[+1(5.02e-08)]_51 chrXVI:819273-819992 8.42e-01 100 chrXVI:856748-857160 1.29e-12 4_[+2(3.48e-10)]_14_[+1(3.41e-10)]_\ 40 chrXVI:860116-860670 5.31e-09 42_[+2(3.09e-07)]_12_[+1(2.29e-09)]_\ 4 chrXVI:866438-866750 3.03e-05 40_[-3(5.70e-08)]_45 chrXVI:880024-880586 6.07e-07 50_[-1(5.96e-11)]_29 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************