******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--MIG1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrII:198099-198599 1.0000 100 chrVII:1004013-1004411 1.0000 100 chrXIV:585407-586581 1.0000 100 chrVI:167251-167696 1.0000 100 chrXI:74408-74962 1.0000 100 chrI:159740-160269 1.0000 100 chrIV:1161528-1161906 1.0000 100 chrXVI:821630-822238 1.0000 100 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100 chrVII:405293-405775 1.0000 100 chrIII:78406-78922 1.0000 100 chrV:6168-6679 1.0000 100 chrX:378129-378229 1.0000 100 chrXIII:463306-463886 1.0000 100 chrXIII:5343-5776 1.0000 100 chrIII:14136-17369 1.0000 100 chrII:642860-643265 1.0000 100 chrXIII:286590-287067 1.0000 100 chrXIV:6515-7454 1.0000 100 chrVII:287043-287763 1.0000 100 chrXIII:480355-480896 1.0000 100 chrX:123453-123553 1.0000 100 chrIV:281829-282359 1.0000 100 chrXIII:501590-502151 1.0000 100 chrVIII:222609-222862 1.0000 100 chrVII:609285-610076 1.0000 100 chrXV:109602-111267 1.0000 100 chrXI:140753-142213 1.0000 100 chrXIII:586330-586906 1.0000 100 chrVI:269498-270158 1.0000 100 chrVII:561271-561946 1.0000 100 chrVII:289345-289700 1.0000 100 chrXV:228099-228616 1.0000 100 chrX:598416-598516 1.0000 100 chrX:531580-531680 1.0000 100 chrXII:241570-241993 1.0000 100 chrXIV:449377-449692 1.0000 100 chrIV:129909-130987 1.0000 100 chrVII:14214-14593 1.0000 100 chrXII:975787-976249 1.0000 100 chrVII:648744-649419 1.0000 100 chrII:59511-61265 1.0000 100 chrV:321892-323423 1.0000 100 chrIX:325538-326083 1.0000 100 chrVII:876186-876732 1.0000 100 chrXIII:540198-540707 1.0000 100 chrIV:835791-836248 1.0000 100 chrVIII:401055-401363 1.0000 100 chrIII:293706-295846 1.0000 100 chrVII:277053-278722 1.0000 100 chrXII:534466-534808 1.0000 100 chrII:71108-71404 1.0000 100 chrXIV:575151-576200 1.0000 100 chrVI:180694-181313 1.0000 100 chrXII:657702-658726 1.0000 100 chrII:350559-351120 1.0000 100 chrVII:687567-687905 1.0000 100 chrXII:1051888-1052361 1.0000 100 chrV:42202-42377 1.0000 100 chrVII:328388-329211 1.0000 100 chrII:87933-88596 1.0000 100 chrI:180937-181480 1.0000 100 chrXV:671073-671458 1.0000 100 chrIV:322203-323631 1.0000 100 chrXII:11040-11993 1.0000 100 chrVIII:125894-126298 1.0000 100 chrIV:76857-77131 1.0000 100 chrII:44993-45322 1.0000 100 chrIV:520598-521413 1.0000 100 chrXIII:754438-754916 1.0000 100 chrXII:728031-728726 1.0000 100 chrXIII:306120-307291 1.0000 100 chrIII:279784-280330 1.0000 100 chrXI:307027-307421 1.0000 100 chrXII:837589-839402 1.0000 100 chrIII:95967-96291 1.0000 100 chrVI:162039-162447 1.0000 100 chrVIII:358279-358793 1.0000 100 chrXV:161098-161386 1.0000 100 chrIII:292687-293034 1.0000 100 chrXVI:435565-436173 1.0000 100 chrXV:901429-901765 1.0000 100 chrXV:796836-797715 1.0000 100 chrVII:345845-346679 1.0000 100 chrXII:95504-95933 1.0000 100 chrII:266165-266655 1.0000 100 chrXV:779704-781012 1.0000 100 chrVII:828468-828989 1.0000 100 chrXV:259330-259970 1.0000 100 chrXV:281971-282658 1.0000 100 chrIX:438749-439885 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--MIG1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--MIG1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--MIG1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.302 C 0.198 G 0.198 T 0.302 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--MIG1/background): A 0.313 C 0.187 G 0.187 T 0.313 ******************************************************************************** ******************************************************************************** MOTIF MBSGGRATCGAACCSVKGAYCTYHHG MEME-1 width = 26 sites = 105 llr = 2020 E-value = 4.3e-449 ******************************************************************************** -------------------------------------------------------------------------------- Motif MBSGGRATCGAACCSVKGAYCTYHHG MEME-1 Description -------------------------------------------------------------------------------- Simplified A 4:12:65:::aa::13:37:::132: pos.-specific C 5431::2:7:::a8532::6734443 probability G 1357a42::a:::134571:11::17 matrix T :2::::1a3::::21:3:2417433: bits 2.4 * * * 2.2 * * * 1.9 * * * 1.7 * * **** Relative 1.5 * ****** * * Entropy 1.2 * ******* * * (27.8 bits) 1.0 *** ******* * ** * 0.7 ***** ********* * *** * 0.5 ****** **************** * 0.2 ************************** 0.0 -------------------------- Multilevel CCGGGAATCGAACCCGGGACCTCCCG consensus AGCA GC T GCTA T CTATC sequence T G A TA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MBSGGRATCGAACCSVKGAYCTYHHG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------------- chrIII:123370-123865 + 18 5.28e-17 GTGGGGCGAG CCGGGACTCGAACCCGGGACCTCCCG CACCCTAAGC chrVI:162039-162447 - 72 5.31e-12 AAG CCCGGAATCGAACCGGGGGCCCAACG ATGGCAACGT chrVI:180694-181313 + 29 5.31e-12 ACTGCGCAAG CCCGGAATCGAACCGGGGGCCCAACG ATGGCAACGT chrX:531580-531680 - 44 5.31e-12 ACTGCGCAAG CCCGGAATCGAACCGGGGGCCCAACG ATGGCAACGT chrXVI:572025-572562 - 63 5.31e-12 ATTGCGCAAG CCCGGAATCGAACCGGGGGCCCAACG ATGGCAACGT chrVII:930799-931213 + 5 5.31e-12 CAAG CCCGGAATCGAACCGGGGGCCCAACG ATGGCAACGT chrXIII:183721-184170 + 11 5.31e-12 TATGCGCAAG CCCGGAATCGAACCGGGGGCCCAACG ATGGCAACGT chrXIV:567900-568488 - 40 6.28e-12 AAGGGGCGAG CTGGGAATTGAACCCAGGGCCTCTCG CATGCTTTGT chrVIII:388676-389195 + 16 6.28e-12 ATGGGGCGAG CTGGGAATTGAACCCAGGGCCTCTCG CATGCTTTGT chrXIV:546952-547403 - 36 6.28e-12 ACGGGGCGAG CTGGGAATTGAACCCAGGGCCTCTCG CATGCTTTGT chrXV:464247-464850 - 20 6.28e-12 AAGGGGCGAG CTGGGAATTGAACCCAGGGCCTCTCG CATGCTTTGT chrXII:92329-92895 - 55 6.28e-12 AAGGGGCGAG CTGGGAATTGAACCCAGGGCCTCTCG CATGCTTTGT chrXV:300862-301459 - 55 6.28e-12 AGGGGGCGAG CTGGGAATTGAACCCAGGGCCTCTCG CATGCTTTGT chrXV:980501-981045 - 31 6.28e-12 AAGGGGCGAG CTGGGAATTGAACCCAGGGCCTCTCG CATGCTTTGT chrVII:541611-542176 - 45 1.20e-11 CACTCCGATA CGGGGAGTCGAACCCCGGTCTCCACG GTGAAAGCGT chrXVI:209971-210520 + 5 1.20e-11 GATA CGGGGAGTCGAACCCCGGTCTCCACG GTGAAAGCGT chrV:487090-487601 + 44 1.20e-11 TACTCCGATA CGGGGAGTCGAACCCCGGTCTCCACG GTGAAAGCGT chrV:176898-177406 - 35 1.20e-11 TACTCCGATA CGGGGAGTCGAACCCCGGTCTCCACG GTGAAAGCGT chrII:645000-645437 - 37 1.20e-11 AACTCCGATA CGGGGAGTCGAACCCCGGTCTCCACG GTGAAAGCGT chrVII:876186-876732 - 24 1.63e-11 AAAGCCCTGT AGGGGGCTCGAACCCCTAACCTTATG ATTAAGAGTC chrXIII:480355-480896 + 54 1.63e-11 GAAGCCCTGT AGGGGGCTCGAACCCCTAACCTTATG ATTAAGAGTC chrV:435496-436016 + 54 1.63e-11 AAAGCCCTGT AGGGGGCTCGAACCCCTAACCTTATG ATTAAGAGTC chrV:135161-135694 + 56 1.63e-11 AAAGCCCTGT AGGGGGCTCGAACCCCTAACCTTATG ATTAAGAGTC chrIX:300030-300509 + 17 1.63e-11 ATAGCCCTGT AGGGGGCTCGAACCCCTAACCTTATG ATTAAGAGTC chrIV:1352292-1352733 + 12 1.63e-11 ATAGCCCTGT AGGGGGCTCGAACCCCTAACCTTATG ATTAAGAGTC chrX:414794-414894 - 33 1.63e-11 TTAGCCCTGT AGGGGGCTCGAACCCCTAACCTTATG ATTAAGAGTC chrVI:226501-226928 + 32 1.63e-11 TAAGCCCTGT AGGGGGCTCGAACCCCTAACCTTATG ATTAAGAGTC chrXI:202844-203318 - 7 1.63e-11 AAAGCCCTGT AGGGGGCTCGAACCCCTAACCTTATG ATTAAG chrVII:122041-122555 - 60 1.63e-11 ATAGCCCTGT AGGGGGCTCGAACCCCTAACCTTATG ATTAAGAGTC chrXII:1051888-1052361 + 5 2.56e-11 CTCT AGCGGGATCGAACCGCTGATCCCCGC GTTATTAGCA chrI:166051-166571 - 45 2.56e-11 TTTGGACGCA ACCGGAATCGAACCGATGACCTCTTC CTTGCAAGGG chrIX:183281-183710 + 3 2.56e-11 CT AGCGGGATCGAACCGCTGATCCCCGC GTTATTAGCA chrXVI:880073-880557 + 39 2.56e-11 AATGGTCTCT AGCGGGATCGAACCGCTGATCCCCGC GTTATTAGCA chrXV:854010-854422 + 29 2.56e-11 ATTGGACGCA ACCGGAATCGAACCGATGACCTCTTC CTTGCAAGGG chrXII:214699-215148 + 18 2.56e-11 AATGGACGCA ACCGGAATCGAACCGATGACCTCTTC CTTGCAAGGG chrII:197236-197860 - 36 2.56e-11 AATGGTCTCT AGCGGGATCGAACCGCTGATCCCCGC GTTATTAGCA chrV:551049-551561 + 38 2.56e-11 ATTGGTCTCT AGCGGGATCGAACCGCTGATCCCCGC GTTATTAGCA chrVII:779414-779876 - 59 6.88e-11 CTTGAGCGGT ACGAGAATCGAACCCGTGTCCCCACC TTGGAAGGGT chrXI:578774-579298 - 41 8.99e-11 AACTCCTCAT AGGGGGCTCGAACCCCTGACATTTCG GTATCCTTGC chrXVI:768965-769460 + 53 8.99e-11 AACTCCTCAT AGGGGGCTCGAACCCCTGACATTTCG GTATCCTTGC chrXII:875259-875641 - 38 8.99e-11 AACTCCTCAT AGGGGGCTCGAACCCCTGACATTTCG GTATCCTTGC chrXV:438418-438995 - 49 8.99e-11 AACTCCTCAT AGGGGGCTCGAACCCCTGACATTTCG GTATCCTTGC chrIV:1075297-1075746 + 9 1.02e-10 TGTTCCAA CCGAGGATCGAACTCGGGACCTTTGC CGTGTGAAGG chrVII:828468-828989 + 53 1.33e-10 AGCACTCACG ATGGGGGTCGAACCCATAATCTTCTG ATTAGAAGTC chrIV:520598-521413 - 55 1.33e-10 AAAGGTCCTA CCCGGATTCGAACCGGGGTTGTCCGG ATCAAAACCG chrVII:405293-405775 - 24 1.33e-10 AGCACTCACG ATGGGGGTCGAACCCATAATCTTCTG ATTAGAAGTC chrIV:644988-645375 + 30 1.33e-10 AAAGGTCCTA CCCGGATTCGAACCGGGGTTGTCCGG ATCAAAACCG chrIII:168091-168619 + 4 1.33e-10 CTA CCCGGATTCGAACCGGGGTTGTCCGG ATCAAAACCG chrVII:736198-736634 - 12 1.33e-10 AACACTCACG ATGGGGGTCGAACCCATAATCTTCTG ATTAGAAGTC chrXI:162285-162763 + 21 1.33e-10 AACACTCACG ATGGGGGTCGAACCCATAATCTTCTG ATTAGAAGTC chrXII:448323-449023 + 35 1.33e-10 GAAGGTCCTA CCCGGATTCGAACCGGGGTTGTCCGG ATCAAAACCG chrX:355146-355246 - 28 1.33e-10 AGCACTCACG ATGGGGGTCGAACCCATAATCTTCTG ATTAGAAGTC chrXI:379472-379924 - 72 1.71e-10 TCG CCCAGGATCGAACTGGGGACGTTCTG CGTGTTAAGC chrV:469267-469704 - 62 1.71e-10 AATGATTTCG CCCAGGATCGAACTGGGGACGTTCTG CGTGTTAAGC chrVII:412083-412568 + 27 1.71e-10 CTTGATTTCG CCCAGGATCGAACTGGGGACGTTCTG CGTGTTAAGC chrVIII:85092-85565 + 28 1.71e-10 ATTGATTTCG CCCAGGATCGAACTGGGGACGTTCTG CGTGTTAAGC chrXIII:372187-372733 + 43 1.71e-10 AATGATTTCG CCCAGGATCGAACTGGGGACGTTCTG CGTGTTAAGC chrV:438269-439248 - 32 1.71e-10 ATTGATTTCG CCCAGGATCGAACTGGGGACGTTCTG CGTGTTAAGC chrXII:687652-688138 + 22 1.71e-10 AATGATTTCG CCCAGGATCGAACTGGGGACGTTCTG CGTGTTAAGC chrX:538365-538465 - 21 1.94e-10 AACGTTCCGT ACGGGACTCGAACCCGCAGTCTTCTC CTTAGGAGGG chrIV:1256823-1257285 + 12 1.94e-10 AATGCGGAAG CCGGGAATCGAACCCGGGCCCCATGC TTGGGAAGCA chrV:130833-131439 + 4 2.47e-10 TTA CCCGGATTCGAACCGGGGTTGTTCGG ATCAAAACCG chrXI:46568-47005 + 7 5.00e-10 CCCTCT GTGGGAATTGAACCCACGATCCCCGC ATTACGAGTG chrIV:488467-489166 + 39 6.26e-10 TCTGATCCAA CCGAGGTTCGAACTCGGGATCTTCGC CGTGTAAAGG chrVII:774128-774617 - 66 1.20e-09 TTGGACGAG TCCGGAATCGAACCGGAGACCTCTCC CATGCTAAGG chrXIII:768181-768630 + 22 1.20e-09 TTTGGACGAG TCCGGAATCGAACCGGAGACCTCTCC CATGCTAAGG chrIV:410202-410720 - 7 1.20e-09 TTTGGACGAG TCCGGAATCGAACCGGAGACCTCTCC CATGCT chrXVI:559975-560494 + 22 2.20e-09 AATGCGAATT CTGTGGATCGAACACAGGACCTCCAG ATAACTTGAC chrXII:374210-374653 - 13 2.20e-09 ATCTTCCCCG CCAGGACTTGAACCTGGAATCTTCTG GTTCGTAGCC chrXI:490741-491356 - 9 2.20e-09 TTCTTCCCCG CCAGGACTTGAACCTGGAATCTTCTG GTTCGTAG chrXIV:374715-375111 - 63 2.20e-09 ATTGCGAACT CTGTGGATCGAACACAGGACCTCCAG ATGACTTGAC chrXVI:622332-622842 + 11 2.20e-09 AATGCGAATT CTGTGGATCGAACACAGGACCTCCAG ATAACTTGAC chrV:492150-492562 + 54 2.20e-09 TCCTTCCCCG CCAGGACTTGAACCTGGAATCTTCTG GTTCGTAGCC chrII:266165-266655 - 57 2.95e-09 AATGCTTCCA ATCGGATTTGAACCGATGATCTCCAC ATTACTAGTG chrIX:325538-326083 - 27 2.95e-09 ATTGCTTCCA ATCGGATTTGAACCGATGATCTCCAC ATTACTAGTG chrXIV:104596-105117 - 38 2.95e-09 TATGCTTCCA ATCGGATTTGAACCGATGATCTCCAC ATTACTAGTG chrIV:433996-434551 + 49 2.95e-09 TATGCTTCCA ATCGGATTTGAACCGATGATCTCCAC ATTACTAGTG chrXIII:168614-169050 - 68 4.30e-09 CTCCCGG GGGCGAGTCGAACGCCCGATCTCAAG ATTTCGTAGT chrXIII:837712-838256 - 49 4.30e-09 TATCTCCCGG GGGCGAGTCGAACGCCCGATCTCAAG ATTTCGTAGT chrVI:210423-210894 + 19 4.30e-09 TATCTCCCGG GGGCGAGTCGAACGCCCGATCTCAAG ATTTCGTAGT chrIV:946156-946620 - 29 4.30e-09 AATCTCCCGG GGGCGAGTCGAACGCCCGATCTCAAG ATTTCGTAGT chrX:354042-354142 - 48 4.30e-09 AATCTCCCGG GGGCGAGTCGAACGCCCGATCTCAAG ATTTCGTAGT chrVI:167251-167696 - 69 4.30e-09 TCCCGG GGGCGAGTCGAACGCCCGATCTCAAG ATTTCGTAGT chrVII:287043-287763 + 5 5.16e-09 ACGG ACAGGAATTGAACCTGCAACCCTTCG ATTGCAATCT chrXVI:55848-56509 + 49 5.16e-09 ATTGAAACGG ACAGGAATTGAACCTGCAACCCTTCG ATTGCAATCT chrXIII:379016-379593 + 57 5.16e-09 ATTGAAACGG ACAGGAATTGAACCTGCAACCCTTCG ATTGCAATCT chrXI:302697-303250 - 67 5.16e-09 TGAAACGG ACAGGAATTGAACCTGCAACCCTTCG ATTGCAATCT chrXII:975787-976249 + 23 2.32e-08 AACGACCCCA GTGAGGGTTGAACTCACGATCTTGCG ATTAACAGTC chrXV:228099-228616 - 64 2.32e-08 AACGACCCCA GTGAGGGTTGAACTCACGATCTTGCG ATTAACAGTC chrVII:730956-731419 - 40 2.32e-08 AACGACCCCA GTGAGGGTTGAACTCACGATCTTGCG ATTAACAGTC chrIII:127541-127940 - 66 2.32e-08 ACGACCCCA GTGAGGGTTGAACTCACGATCTTGCG ATTAACAGTC chrXI:74408-74962 - 29 2.32e-08 AGCGACCCCA GTGAGGGTTGAACTCACGATCTTGCG ATTAACAGTC chrXIII:463306-463886 - 46 2.50e-08 ATCTCCGCGA CGGGGAATTGAACCCCGATCTGGCAC GCGACAAGCG chrX:541328-541428 - 36 2.50e-08 ATCTCCGCGA CGGGGAATTGAACCCCGATCTGGCAC GCGACAAGCG chrIX:336097-336639 + 39 2.50e-08 ATCTCCGCGA CGGGGAATTGAACCCCGATCTGGCAC GCGACAAGCG chrXII:426918-427440 - 41 2.50e-08 TTCTCCGCGA CGGGGAATTGAACCCCGATCTGGCAC GCGACAAGCG chrVIII:466788-467255 - 57 3.90e-08 AATGCCACCT GCCAGAATTGAACTAGCGACCTTTGC ATTACAAGTG chrV:434384-434762 + 26 8.30e-08 AATGCCATCT CCTAGAATCGAACCAGGGTTTCATCG GCCACAACGA chrVII:110361-110917 + 44 8.30e-08 ATTGCCATCT CCTAGAATCGAACCAGGGTTTCATCG GCCACAACGA chrXI:313165-313669 + 42 8.30e-08 AATGCCATCT CCTAGAATCGAACCAGGGTTTCATCG GCCACAACGA chrVIII:62542-63006 - 69 8.30e-08 CCATCT CCTAGAATCGAACCAGGGTTTCATCG GCCACAACGA chrII:642860-643265 + 3 1.07e-07 CA CTCAGGATCGAACTAAGGACCAACAG ATTTGCAATC chrIV:1305428-1305911 - 60 1.81e-06 AACGACAACT GCAGGACTCGAACCTGCGCGGGCCAA AGCCCAAAAG chrIV:980746-981250 + 34 2.52e-06 AACGACAACT GCAGGACTCGAACCTGCGCGGGCAAA GCCCAAAAGA chrIV:884192-884635 - 2 3.46e-06 TGCTATAAGC ACGAAGCTCTAACCACTGAGCTACAC G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MBSGGRATCGAACCSVKGAYCTYHHG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:123370-123865 5.3e-17 17_[+1]_57 chrVI:162039-162447 5.3e-12 71_[-1]_3 chrVI:180694-181313 5.3e-12 28_[+1]_46 chrX:531580-531680 5.3e-12 43_[-1]_31 chrXVI:572025-572562 5.3e-12 62_[-1]_12 chrVII:930799-931213 5.3e-12 4_[+1]_70 chrXIII:183721-184170 5.3e-12 10_[+1]_64 chrXIV:567900-568488 6.3e-12 39_[-1]_35 chrVIII:388676-389195 6.3e-12 15_[+1]_59 chrXIV:546952-547403 6.3e-12 35_[-1]_39 chrXV:464247-464850 6.3e-12 19_[-1]_55 chrXII:92329-92895 6.3e-12 54_[-1]_20 chrXV:300862-301459 6.3e-12 54_[-1]_20 chrXV:980501-981045 6.3e-12 30_[-1]_44 chrVII:541611-542176 1.2e-11 44_[-1]_30 chrXVI:209971-210520 1.2e-11 4_[+1]_70 chrV:487090-487601 1.2e-11 43_[+1]_31 chrV:176898-177406 1.2e-11 34_[-1]_40 chrII:645000-645437 1.2e-11 36_[-1]_38 chrVII:876186-876732 1.6e-11 23_[-1]_51 chrXIII:480355-480896 1.6e-11 53_[+1]_21 chrV:435496-436016 1.6e-11 53_[+1]_21 chrV:135161-135694 1.6e-11 55_[+1]_19 chrIX:300030-300509 1.6e-11 16_[+1]_58 chrIV:1352292-1352733 1.6e-11 11_[+1]_63 chrX:414794-414894 1.6e-11 32_[-1]_42 chrVI:226501-226928 1.6e-11 31_[+1]_43 chrXI:202844-203318 1.6e-11 6_[-1]_68 chrVII:122041-122555 1.6e-11 59_[-1]_15 chrXII:1051888-1052361 2.6e-11 4_[+1]_70 chrI:166051-166571 2.6e-11 44_[-1]_30 chrIX:183281-183710 2.6e-11 2_[+1]_72 chrXVI:880073-880557 2.6e-11 38_[+1]_36 chrXV:854010-854422 2.6e-11 28_[+1]_46 chrXII:214699-215148 2.6e-11 17_[+1]_57 chrII:197236-197860 2.6e-11 35_[-1]_39 chrV:551049-551561 2.6e-11 37_[+1]_37 chrVII:779414-779876 6.9e-11 58_[-1]_16 chrXI:578774-579298 9e-11 40_[-1]_34 chrXVI:768965-769460 9e-11 52_[+1]_22 chrXII:875259-875641 9e-11 37_[-1]_37 chrXV:438418-438995 9e-11 48_[-1]_26 chrIV:1075297-1075746 1e-10 8_[+1]_66 chrVII:828468-828989 1.3e-10 52_[+1]_22 chrIV:520598-521413 1.3e-10 54_[-1]_20 chrVII:405293-405775 1.3e-10 23_[-1]_51 chrIV:644988-645375 1.3e-10 29_[+1]_45 chrIII:168091-168619 1.3e-10 3_[+1]_71 chrVII:736198-736634 1.3e-10 11_[-1]_63 chrXI:162285-162763 1.3e-10 20_[+1]_54 chrXII:448323-449023 1.3e-10 34_[+1]_40 chrX:355146-355246 1.3e-10 27_[-1]_47 chrXI:379472-379924 1.7e-10 71_[-1]_3 chrV:469267-469704 1.7e-10 61_[-1]_13 chrVII:412083-412568 1.7e-10 26_[+1]_48 chrVIII:85092-85565 1.7e-10 27_[+1]_47 chrXIII:372187-372733 1.7e-10 42_[+1]_32 chrV:438269-439248 1.7e-10 31_[-1]_43 chrXII:687652-688138 1.7e-10 21_[+1]_53 chrX:538365-538465 1.9e-10 20_[-1]_54 chrIV:1256823-1257285 1.9e-10 11_[+1]_63 chrV:130833-131439 2.5e-10 3_[+1]_71 chrXI:46568-47005 5e-10 6_[+1]_68 chrIV:488467-489166 6.3e-10 38_[+1]_36 chrVII:774128-774617 1.2e-09 65_[-1]_9 chrXIII:768181-768630 1.2e-09 21_[+1]_53 chrIV:410202-410720 1.2e-09 6_[-1]_68 chrXVI:559975-560494 2.2e-09 21_[+1]_53 chrXII:374210-374653 2.2e-09 12_[-1]_62 chrXI:490741-491356 2.2e-09 8_[-1]_66 chrXIV:374715-375111 2.2e-09 62_[-1]_12 chrXVI:622332-622842 2.2e-09 10_[+1]_64 chrV:492150-492562 2.2e-09 53_[+1]_21 chrII:266165-266655 2.9e-09 56_[-1]_18 chrIX:325538-326083 2.9e-09 26_[-1]_48 chrXIV:104596-105117 2.9e-09 37_[-1]_37 chrIV:433996-434551 2.9e-09 48_[+1]_26 chrXIII:168614-169050 4.3e-09 67_[-1]_7 chrXIII:837712-838256 4.3e-09 48_[-1]_26 chrVI:210423-210894 4.3e-09 18_[+1]_56 chrIV:946156-946620 4.3e-09 28_[-1]_46 chrX:354042-354142 4.3e-09 47_[-1]_27 chrVI:167251-167696 4.3e-09 68_[-1]_6 chrVII:287043-287763 5.2e-09 4_[+1]_70 chrXVI:55848-56509 5.2e-09 48_[+1]_26 chrXIII:379016-379593 5.2e-09 56_[+1]_18 chrXI:302697-303250 5.2e-09 66_[-1]_8 chrXII:975787-976249 2.3e-08 22_[+1]_52 chrXV:228099-228616 2.3e-08 63_[-1]_11 chrVII:730956-731419 2.3e-08 39_[-1]_35 chrIII:127541-127940 2.3e-08 65_[-1]_9 chrXI:74408-74962 2.3e-08 28_[-1]_46 chrXIII:463306-463886 2.5e-08 45_[-1]_29 chrX:541328-541428 2.5e-08 35_[-1]_39 chrIX:336097-336639 2.5e-08 38_[+1]_36 chrXII:426918-427440 2.5e-08 40_[-1]_34 chrVIII:466788-467255 3.9e-08 56_[-1]_18 chrV:434384-434762 8.3e-08 25_[+1]_49 chrVII:110361-110917 8.3e-08 43_[+1]_31 chrXI:313165-313669 8.3e-08 41_[+1]_33 chrVIII:62542-63006 8.3e-08 68_[-1]_6 chrII:642860-643265 1.1e-07 2_[+1]_72 chrIV:1305428-1305911 1.8e-06 59_[-1]_15 chrIV:980746-981250 2.5e-06 33_[+1]_41 chrIV:884192-884635 3.5e-06 1_[-1]_73 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MBSGGRATCGAACCSVKGAYCTYHHG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF MBSGGRATCGAACCSVKGAYCTYHHG width=26 seqs=105 chrIII:123370-123865 ( 18) CCGGGACTCGAACCCGGGACCTCCCG 1 chrVI:162039-162447 ( 72) CCCGGAATCGAACCGGGGGCCCAACG 1 chrVI:180694-181313 ( 29) CCCGGAATCGAACCGGGGGCCCAACG 1 chrX:531580-531680 ( 44) CCCGGAATCGAACCGGGGGCCCAACG 1 chrXVI:572025-572562 ( 63) CCCGGAATCGAACCGGGGGCCCAACG 1 chrVII:930799-931213 ( 5) CCCGGAATCGAACCGGGGGCCCAACG 1 chrXIII:183721-184170 ( 11) CCCGGAATCGAACCGGGGGCCCAACG 1 chrXIV:567900-568488 ( 40) CTGGGAATTGAACCCAGGGCCTCTCG 1 chrVIII:388676-389195 ( 16) CTGGGAATTGAACCCAGGGCCTCTCG 1 chrXIV:546952-547403 ( 36) CTGGGAATTGAACCCAGGGCCTCTCG 1 chrXV:464247-464850 ( 20) CTGGGAATTGAACCCAGGGCCTCTCG 1 chrXII:92329-92895 ( 55) CTGGGAATTGAACCCAGGGCCTCTCG 1 chrXV:300862-301459 ( 55) CTGGGAATTGAACCCAGGGCCTCTCG 1 chrXV:980501-981045 ( 31) CTGGGAATTGAACCCAGGGCCTCTCG 1 chrVII:541611-542176 ( 45) CGGGGAGTCGAACCCCGGTCTCCACG 1 chrXVI:209971-210520 ( 5) CGGGGAGTCGAACCCCGGTCTCCACG 1 chrV:487090-487601 ( 44) CGGGGAGTCGAACCCCGGTCTCCACG 1 chrV:176898-177406 ( 35) CGGGGAGTCGAACCCCGGTCTCCACG 1 chrII:645000-645437 ( 37) CGGGGAGTCGAACCCCGGTCTCCACG 1 chrVII:876186-876732 ( 24) AGGGGGCTCGAACCCCTAACCTTATG 1 chrXIII:480355-480896 ( 54) AGGGGGCTCGAACCCCTAACCTTATG 1 chrV:435496-436016 ( 54) AGGGGGCTCGAACCCCTAACCTTATG 1 chrV:135161-135694 ( 56) AGGGGGCTCGAACCCCTAACCTTATG 1 chrIX:300030-300509 ( 17) AGGGGGCTCGAACCCCTAACCTTATG 1 chrIV:1352292-1352733 ( 12) AGGGGGCTCGAACCCCTAACCTTATG 1 chrX:414794-414894 ( 33) AGGGGGCTCGAACCCCTAACCTTATG 1 chrVI:226501-226928 ( 32) AGGGGGCTCGAACCCCTAACCTTATG 1 chrXI:202844-203318 ( 7) AGGGGGCTCGAACCCCTAACCTTATG 1 chrVII:122041-122555 ( 60) AGGGGGCTCGAACCCCTAACCTTATG 1 chrXII:1051888-1052361 ( 5) AGCGGGATCGAACCGCTGATCCCCGC 1 chrI:166051-166571 ( 45) ACCGGAATCGAACCGATGACCTCTTC 1 chrIX:183281-183710 ( 3) AGCGGGATCGAACCGCTGATCCCCGC 1 chrXVI:880073-880557 ( 39) AGCGGGATCGAACCGCTGATCCCCGC 1 chrXV:854010-854422 ( 29) ACCGGAATCGAACCGATGACCTCTTC 1 chrXII:214699-215148 ( 18) ACCGGAATCGAACCGATGACCTCTTC 1 chrII:197236-197860 ( 36) AGCGGGATCGAACCGCTGATCCCCGC 1 chrV:551049-551561 ( 38) AGCGGGATCGAACCGCTGATCCCCGC 1 chrVII:779414-779876 ( 59) ACGAGAATCGAACCCGTGTCCCCACC 1 chrXI:578774-579298 ( 41) AGGGGGCTCGAACCCCTGACATTTCG 1 chrXVI:768965-769460 ( 53) AGGGGGCTCGAACCCCTGACATTTCG 1 chrXII:875259-875641 ( 38) AGGGGGCTCGAACCCCTGACATTTCG 1 chrXV:438418-438995 ( 49) AGGGGGCTCGAACCCCTGACATTTCG 1 chrIV:1075297-1075746 ( 9) CCGAGGATCGAACTCGGGACCTTTGC 1 chrVII:828468-828989 ( 53) ATGGGGGTCGAACCCATAATCTTCTG 1 chrIV:520598-521413 ( 55) CCCGGATTCGAACCGGGGTTGTCCGG 1 chrVII:405293-405775 ( 24) ATGGGGGTCGAACCCATAATCTTCTG 1 chrIV:644988-645375 ( 30) CCCGGATTCGAACCGGGGTTGTCCGG 1 chrIII:168091-168619 ( 4) CCCGGATTCGAACCGGGGTTGTCCGG 1 chrVII:736198-736634 ( 12) ATGGGGGTCGAACCCATAATCTTCTG 1 chrXI:162285-162763 ( 21) ATGGGGGTCGAACCCATAATCTTCTG 1 chrXII:448323-449023 ( 35) CCCGGATTCGAACCGGGGTTGTCCGG 1 chrX:355146-355246 ( 28) ATGGGGGTCGAACCCATAATCTTCTG 1 chrXI:379472-379924 ( 72) CCCAGGATCGAACTGGGGACGTTCTG 1 chrV:469267-469704 ( 62) CCCAGGATCGAACTGGGGACGTTCTG 1 chrVII:412083-412568 ( 27) CCCAGGATCGAACTGGGGACGTTCTG 1 chrVIII:85092-85565 ( 28) CCCAGGATCGAACTGGGGACGTTCTG 1 chrXIII:372187-372733 ( 43) CCCAGGATCGAACTGGGGACGTTCTG 1 chrV:438269-439248 ( 32) CCCAGGATCGAACTGGGGACGTTCTG 1 chrXII:687652-688138 ( 22) CCCAGGATCGAACTGGGGACGTTCTG 1 chrX:538365-538465 ( 21) ACGGGACTCGAACCCGCAGTCTTCTC 1 chrIV:1256823-1257285 ( 12) CCGGGAATCGAACCCGGGCCCCATGC 1 chrV:130833-131439 ( 4) CCCGGATTCGAACCGGGGTTGTTCGG 1 chrXI:46568-47005 ( 7) GTGGGAATTGAACCCACGATCCCCGC 1 chrIV:488467-489166 ( 39) CCGAGGTTCGAACTCGGGATCTTCGC 1 chrVII:774128-774617 ( 66) TCCGGAATCGAACCGGAGACCTCTCC 1 chrXIII:768181-768630 ( 22) TCCGGAATCGAACCGGAGACCTCTCC 1 chrIV:410202-410720 ( 7) TCCGGAATCGAACCGGAGACCTCTCC 1 chrXVI:559975-560494 ( 22) CTGTGGATCGAACACAGGACCTCCAG 1 chrXII:374210-374653 ( 13) CCAGGACTTGAACCTGGAATCTTCTG 1 chrXI:490741-491356 ( 9) CCAGGACTTGAACCTGGAATCTTCTG 1 chrXIV:374715-375111 ( 63) CTGTGGATCGAACACAGGACCTCCAG 1 chrXVI:622332-622842 ( 11) CTGTGGATCGAACACAGGACCTCCAG 1 chrV:492150-492562 ( 54) CCAGGACTTGAACCTGGAATCTTCTG 1 chrII:266165-266655 ( 57) ATCGGATTTGAACCGATGATCTCCAC 1 chrIX:325538-326083 ( 27) ATCGGATTTGAACCGATGATCTCCAC 1 chrXIV:104596-105117 ( 38) ATCGGATTTGAACCGATGATCTCCAC 1 chrIV:433996-434551 ( 49) ATCGGATTTGAACCGATGATCTCCAC 1 chrXIII:168614-169050 ( 68) GGGCGAGTCGAACGCCCGATCTCAAG 1 chrXIII:837712-838256 ( 49) GGGCGAGTCGAACGCCCGATCTCAAG 1 chrVI:210423-210894 ( 19) GGGCGAGTCGAACGCCCGATCTCAAG 1 chrIV:946156-946620 ( 29) GGGCGAGTCGAACGCCCGATCTCAAG 1 chrX:354042-354142 ( 48) GGGCGAGTCGAACGCCCGATCTCAAG 1 chrVI:167251-167696 ( 69) GGGCGAGTCGAACGCCCGATCTCAAG 1 chrVII:287043-287763 ( 5) ACAGGAATTGAACCTGCAACCCTTCG 1 chrXVI:55848-56509 ( 49) ACAGGAATTGAACCTGCAACCCTTCG 1 chrXIII:379016-379593 ( 57) ACAGGAATTGAACCTGCAACCCTTCG 1 chrXI:302697-303250 ( 67) ACAGGAATTGAACCTGCAACCCTTCG 1 chrXII:975787-976249 ( 23) GTGAGGGTTGAACTCACGATCTTGCG 1 chrXV:228099-228616 ( 64) GTGAGGGTTGAACTCACGATCTTGCG 1 chrVII:730956-731419 ( 40) GTGAGGGTTGAACTCACGATCTTGCG 1 chrIII:127541-127940 ( 66) GTGAGGGTTGAACTCACGATCTTGCG 1 chrXI:74408-74962 ( 29) GTGAGGGTTGAACTCACGATCTTGCG 1 chrXIII:463306-463886 ( 46) CGGGGAATTGAACCCCGATCTGGCAC 1 chrX:541328-541428 ( 36) CGGGGAATTGAACCCCGATCTGGCAC 1 chrIX:336097-336639 ( 39) CGGGGAATTGAACCCCGATCTGGCAC 1 chrXII:426918-427440 ( 41) CGGGGAATTGAACCCCGATCTGGCAC 1 chrVIII:466788-467255 ( 57) GCCAGAATTGAACTAGCGACCTTTGC 1 chrV:434384-434762 ( 26) CCTAGAATCGAACCAGGGTTTCATCG 1 chrVII:110361-110917 ( 44) CCTAGAATCGAACCAGGGTTTCATCG 1 chrXI:313165-313669 ( 42) CCTAGAATCGAACCAGGGTTTCATCG 1 chrVIII:62542-63006 ( 69) CCTAGAATCGAACCAGGGTTTCATCG 1 chrII:642860-643265 ( 3) CTCAGGATCGAACTAAGGACCAACAG 1 chrIV:1305428-1305911 ( 60) GCAGGACTCGAACCTGCGCGGGCCAA 1 chrIV:980746-981250 ( 34) GCAGGACTCGAACCTGCGCGGGCAAA 1 chrIV:884192-884635 ( 2) ACGAAGCTCTAACCACTGAGCTACAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MBSGGRATCGAACCSVKGAYCTYHHG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 26 n= 45000 bayes= 6.69356 E= 4.3e-449 21 132 -39 -345 -1336 120 80 -34 -187 84 154 -304 -58 -171 192 -345 -504 -1336 241 -1336 91 -1336 113 -1336 66 17 10 -172 -1336 -1336 -1336 167 -1336 196 -1336 -18 -1336 -1336 241 -504 167 -1336 -1336 -1336 167 -1336 -1336 -1336 -1336 242 -1336 -1336 -345 203 -171 -104 -223 151 75 -187 -18 84 107 -1336 -345 3 132 0 -29 -1336 199 -1336 107 -271 -48 -79 -1336 166 -271 28 -304 192 -48 -134 -504 46 -171 111 -134 120 -229 39 -18 113 -197 -23 -65 103 -39 -18 -404 46 196 -1336 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MBSGGRATCGAACCSVKGAYCTYHHG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 26 nsites= 105 E= 4.3e-449 0.361905 0.466667 0.142857 0.028571 0.000000 0.428571 0.323810 0.247619 0.085714 0.333333 0.542857 0.038095 0.209524 0.057143 0.704762 0.028571 0.009524 0.000000 0.990476 0.000000 0.590476 0.000000 0.409524 0.000000 0.495238 0.209524 0.200000 0.095238 0.000000 0.000000 0.000000 1.000000 0.000000 0.723810 0.000000 0.276190 0.000000 0.000000 0.990476 0.009524 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.028571 0.761905 0.057143 0.152381 0.066667 0.533333 0.314286 0.085714 0.276190 0.333333 0.390476 0.000000 0.028571 0.190476 0.466667 0.314286 0.257143 0.000000 0.742857 0.000000 0.657143 0.028571 0.133333 0.180952 0.000000 0.590476 0.028571 0.380952 0.038095 0.704762 0.133333 0.123810 0.009524 0.257143 0.057143 0.676190 0.123810 0.428571 0.038095 0.409524 0.276190 0.409524 0.047619 0.266667 0.200000 0.380952 0.142857 0.276190 0.019048 0.257143 0.723810 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MBSGGRATCGAACCSVKGAYCTYHHG MEME-1 regular expression -------------------------------------------------------------------------------- [CA][CGT][GC][GA]G[AG][ACG]T[CT]GAACC[CG][GCA][GT][GA]A[CT]C[TC][CT][CAT][CTA][GC] -------------------------------------------------------------------------------- Time 349.68 secs. ******************************************************************************** ******************************************************************************** MOTIF SSCTYTWMCCACTRVRCYAHNNRVSCW MEME-2 width = 27 sites = 101 llr = 1553 E-value = 1.3e-258 ******************************************************************************** -------------------------------------------------------------------------------- Motif SSCTYTWMCCACTRVRCYAHNNRVSCW MEME-2 Description -------------------------------------------------------------------------------- Simplified A 22111355:29::535::a43333:14 pos.-specific C 43514:14a6:9:13:a6:3222359: probability G 4512::1::21::335::::32435:1 matrix T ::35573::::1a1:::4:3231:::4 bits 2.4 2.2 * * 1.9 * * 1.7 * * * * * Relative 1.5 * ** * * * Entropy 1.2 * *** *** * (22.2 bits) 1.0 * *** **** ** 0.7 * ****** **** ** 0.5 *** ** ****** ***** ** 0.2 ******************** ***** 0.0 --------------------------- Multilevel GGCTTTAACCACTAAGCCAAGAGCCCT consensus CCTGCATC A GGA T CATAAG A sequence C T C G G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYTWMCCACTRVRCYAHNNRVSCW MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------------- chrVII:774128-774617 - 26 7.93e-13 GCTAAGGGAG CGCGCTACCGACTACGCCACACGCCCA ATTAATTGAT chrXIII:768181-768630 + 61 7.93e-13 GCTAAGGGAG CGCGCTACCGACTACGCCACACGCCCA TTTCTTATTG chrX:197171-197271 + 19 7.93e-13 GCTAAGGGAG CGCGCTACCGACTACGCCACACGCCCT AATATTATTG chrVI:204794-205200 + 24 3.27e-12 GCTAAGGGAG CGCGCTACCGACTACGCCACACGCCCG AACGTTTGTT chrI:166051-166571 - 5 7.03e-12 GCAAGGGAAG CGCGCTACCAACTGCGCCATGTGCCCA ACTC chrXV:854010-854422 + 68 7.03e-12 GCAAGGGAAG CGCGCTACCAACTGCGCCATGTGCCCT GATGAC chrXII:214699-215148 + 57 7.03e-12 GCAAGGGAAG CGCGCTACCAACTGCGCCATGTGCCCT AAAACGCGTA chrXII:1051888-1052361 + 45 1.13e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAGAGACCA TGAAAAGGAC chrV:443043-443494 + 32 1.13e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAGAGACCA AATTTTAATG chrIX:183281-183710 + 43 1.13e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAGAGACCA GGAATTTGTT chrX:523872-523972 + 23 5.37e-10 TCTAATCTTT CGCCTTAACCACTCGGCCAAGTTGCCT TTAATCTCTT chrIV:1305428-1305911 - 10 5.37e-10 TCTAATCTTT CGCCTTAACCACTCGGCCAAGTTGCCT TAATTTGTA chrVI:162039-162447 - 34 7.37e-10 TGGCAACGTT GGATTTTACCACTAAACCACTTGCGCT TGTTTTCTTG chrVI:180694-181313 + 66 7.37e-10 TGGCAACGTT GGATTTTACCACTAAACCACTTGCGCT TATTTCTT chrX:531580-531680 - 6 7.37e-10 TGGCAACGTT GGATTTTACCACTAAACCACTTGCGCT CACTA chrIV:992616-993060 - 43 7.37e-10 TGGCAACGTT GGATTTTACCACTAAACCACTTGCGCT CACAATTGTT chrVII:845339-845917 - 70 7.37e-10 CGTT GGATTTTACCACTAAACCACTTGCGCT TGTTATTTAT chrVII:930799-931213 + 42 7.37e-10 TGGCAACGTT GGATTTTACCACTAAACCACTTGCGCT TACTGATTAT chrIV:83302-83813 - 40 7.37e-10 TGGCAACGTT GGATTTTACCACTAAACCACTTGCGCT AAGTGAACTT chrXII:731916-732261 - 51 1.16e-09 TAAATCTGAC GCCTTAAACCACTCGGCCAAACTCCCA TTGTATGTTG chrX:617758-617858 - 22 1.16e-09 TAAATCTGAC GCCTTAAACCACTCGGCCAAACTCCCA TTGTTTGTTG chrXVI:572025-572562 - 25 1.56e-09 TGGCAACGTT GGATTTTACCACTAAACCACTTGCGCG AAGTATTGTG chrXIV:374715-375111 - 5 1.56e-09 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAGTCCGCT TATT chrIX:300030-300509 + 56 1.56e-09 AAGAGTCATA CGCGCTACCGATTGCGCCAACAAGGCT ATTTCGTTGG chrIV:1352292-1352733 + 51 1.56e-09 AAGAGTCATA CGCGCTACCGATTGCGCCAACAAGGCT ATTTCGTTGG chrVI:226501-226928 + 71 1.56e-09 AAGAGTCATA CGCGCTACCGATTGCGCCAACAAGGCA TTT chrXIII:183721-184170 + 48 1.56e-09 TGGCAACGTT GGATTTTACCACTAAACCACTTGCGCG ATCTTTATTG chrVII:122041-122555 - 20 1.56e-09 AAGAGTCATA CGCGCTACCGATTGCGCCAACAAGGCT AATTCGTTGG chrX:378129-378229 - 61 2.38e-09 TTAAGCAGAT GCCATAACCGACTAGACCACGAAACCT ATTAATTTAT chrXIII:195912-196411 + 34 2.38e-09 CCCAAAGCGA GAATCATACCACTAGACCACACGCCCT TGTGAACTTG chrXV:663532-664212 + 38 2.38e-09 TTAAGCAGAT GCCATAACCGACTAGACCACGAAACCA CTATTTGTTG chrXI:379472-379924 - 31 2.38e-09 TTAAGCAGAT GCCATAACCGACTAGACCACGAAACCT ATTAATCTGT chrV:469267-469704 - 21 2.38e-09 TTAAGCAGAT GCCATAACCGACTAGACCACGAAACCA ATTATTTCTT chrVII:823282-823693 - 44 2.38e-09 TTAAGCAGAT GCCATAACCGACTAGACCACGAAACCA CTCTTATTGG chrVII:412083-412568 + 67 2.38e-09 TTAAGCAGAT GCCATAACCGACTAGACCACGAAACCA GTTTTTT chrVIII:85092-85565 + 68 2.38e-09 TTAAGCAGAT GCCATAACCGACTAGACCACGAAACCA AATTCT chrXII:687652-688138 + 62 2.38e-09 TTAAGCAGAT GCCATAACCGACTAGACCACGAAACCT ATTATTTATG chrVIII:358279-358793 + 58 3.58e-09 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAATCCGCT TACTATTTGT chrII:36186-36595 - 57 3.58e-09 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAATCCGCT TACAACTAAT chrVIII:237750-238122 + 28 3.58e-09 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAATCCGCT TACTATTTGT chrVI:157709-158252 + 52 3.58e-09 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAATCCGCT TCTATTTATG chrXVI:622332-622842 + 69 3.58e-09 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAATCCGCA TATCA chrXIII:352108-352494 - 28 3.58e-09 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAATCCGCT TATATTCATA chrII:266165-266655 - 17 4.09e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCATAGAAGCA GTTTTTGATG chrXV:353896-354318 + 31 4.09e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCATAGAAGCA GTAAACCGTT chrVI:101154-101604 - 46 4.66e-09 CCCAAAGCGA GAATCATACCACTAGACCACACGCCCG AATTATTGTT chrXI:83963-84446 - 53 7.73e-09 TAAGTCTGCC GCCTTAGACCACTCGGCCAACCCTCCA TACAAATTTT chrII:9372-9880 - 6 7.73e-09 TAAGTCTGCC GCCTTAGACCACTCGGCCAACCCTCCA CGAAT chrX:424296-424396 + 25 7.73e-09 TAAGTCTGCC GCCTTAGACCACTCGGCCAACCCTCCA TCTTATTTAA chrXV:594210-594650 + 20 8.74e-09 GGGAAGCATA AATTCTAACCACTGAACCACTTGCGCG TTTCAATCAA chrXII:628174-628630 - 30 9.86e-09 TGAATCAGGC GCCTTAGACCGCTCGGCCAAACAACCA CTTATTTGTT chrVII:857231-857667 + 67 9.86e-09 TGAATCAGGC GCCTTAGACCGCTCGGCCAAACAACCA CTTATTT chrXII:784146-784556 - 52 9.86e-09 TAGCAGGCAT CGCCTTAACCACTCGGCCACTGGGACG GTTGAACAAC chrVII:205311-205808 - 11 9.86e-09 TGAATCAGGC GCCTTAGACCGCTCGGCCAAACAACCA CTTATTTGTA chrXIV:96031-96578 + 33 1.25e-08 GGAAGGGTGG GATGATAACCACTACACTAACCGCCCA TGTGTTGGAT chrII:347402-347895 - 4 1.41e-08 TAAGTCTGCC GCCTTAGACCACTCGGCCAACCCTCCG TAT chrXIII:572751-573146 + 32 1.77e-08 ATGAGACTGA CGCTCTTCCTACTGAGCTACTGAAGCT GTCTGTTATG chrX:422627-422727 - 36 1.77e-08 ATGAGACTGA CGCTCTTCCTACTGAGCTACTGAAGCA TACAAAGGAT chrX:390862-390962 + 59 1.77e-08 ATGAGACTGA CGCTCTTCCTACTGAGCTACTGAAGCA CTATTTCTTG chrIII:168091-168619 + 42 2.22e-08 CAAAACCGAA AGTGATAACCACTACACTATAGGACCA GGACTTCTTG chrVII:779414-779876 - 20 2.22e-08 GGAAGGGTGG GATGATAACCACTACACTAACCGCCCG GGGTTAACTT chrIV:644988-645375 + 68 3.81e-08 CAAAACCGAA AGTGATAACCACTACACTATAGGACCG TAACAA chrVIII:134050-134560 - 65 3.81e-08 AAAACCGAA AGTGATAACCACTACACTATAGGACCG GAACTTACTG chrXII:448323-449023 + 73 3.81e-08 CAAAACCGAA AGTGATAACCACTACACTATAGGACCG G chrXII:975787-976249 + 63 4.70e-08 ACAGTCGCAC GCCTTAACCAACTTGGCCATGGAGTCT TTTATTTCCG chrXV:228099-228616 - 23 4.70e-08 ACAGTCGCAC GCCTTAACCAACTTGGCCATGGAGTCT AATATTTTAT chrIII:127541-127940 - 25 4.70e-08 ACAGTCGCAC GCCTTAACCAACTTGGCCATGGAGTCA TTTTATCTTG chrIV:1256823-1257285 + 50 5.20e-08 GGGAAGCATG AATTCTAACCACTGAACCACTTTCGCT AAGAAGATCT chrV:130833-131439 + 42 5.76e-08 CAAAACCGAA AGTGATAACCACTACACTATAAAACCT CTTAATTATT chrXVI:810445-810875 - 65 7.77e-08 CAGTCGCAC GCCTTAACCAACTTGGCCATGGAGTCG CAAATAATGA chrIV:520598-521413 - 16 1.26e-07 CAAAACCGAA AGTGATAACCACTACACTATAGGACCC TAAAATGGAC chrVIII:466788-467255 - 18 1.82e-07 TACAAGTGCA ACGCTCTACCACTAAGCTAAGGAGGCT AAAAATACAA chrVII:661533-661939 - 62 1.82e-07 TACAAGTGCA ACGCTCTACCACTAAGCTAAGGAGGCA AATTTTTACC chrVII:1004013-1004411 - 53 1.82e-07 TACAAGTGCA ACGCTCTACCACTAAGCTAAGGAGGCA AACCCTTGAA chrIII:123370-123865 + 56 2.37e-07 CCCTAAGCGA GAATCATACCTCTAGACCACACGCCCT CCTTTGAAAA chrXI:46568-47005 + 45 2.59e-07 TACGAGTGCG ATGCCTTACCACTTGGCCAAAAGGGCT GAGTAATTTT chrII:350559-351120 - 37 2.83e-07 CAAAACCGAA AGTGATAACCACTACACTATAAAACCC TTTTATTGAT chrXI:162285-162763 + 59 5.52e-07 TAGAAGTCAG ACGCGTTGCCATTACGCCACGCGAGCT AATATTTGTT chrXIII:747762-748137 + 39 5.52e-07 TAGAAGTCAG ACGCGTTGCCATTACGCCACGCGAGCT AGTCATATGT chrIV:568477-569267 - 59 5.52e-07 TAGAAGTCAG ACGCGTTGCCATTACGCCACGCGAGCT ACTATTTGTC chrII:326583-327165 + 16 7.59e-07 TAAAGGCGAC GTCTTGAACCACTGGACCATTGGACCC GGAACTCGAT chrVII:73681-74194 - 51 1.11e-06 TACTGAACTT CAATTTTACAACTAAACTATGAAGCAA GTATCTTATC chrXIII:923204-924377 + 32 1.20e-06 AATGGAACAG GGTATAGACCACTGAGGCAAGTGCCGT GCATAATGAT chrXI:321756-322009 - 41 1.39e-06 CATAAGGGCT ACCCTTAAAAACTCCGCTATGAAGGCA AAAAATATAA chrII:642860-643265 + 41 1.50e-06 TTGCAATCTG CTGCGCTACCACTGCGCCATACGAGCT TTCTATTACA chrXI:513201-513614 + 21 1.50e-06 GACAAGCGCC CATTCTGACCATTAAACTATCACGGAA CGTTATTTGT chrII:405681-406252 - 43 1.50e-06 GACAAGCGCC CATTCTGACCATTAAACTATCACGGAA GAAACAAAGC chrXV:571730-572167 - 59 1.50e-06 GACAAGCGCC CATTCTGACCATTAAACTATCACGGAT TTTAATTGTT chrX:355146-355246 - 71 1.50e-06 GCC CATTCTGACCATTAAACTATCACGGAA GAAACAAAGC chrXII:426918-427440 - 2 1.50e-06 GACAAGCGCC CATTCTGACCATTAAACTATCACGGAT A chrVII:531443-531800 - 38 1.50e-06 GACAAGCGCC CATTCTGACCATTAAACTATCACGGAA GTAACTCGAG chrVIII:62542-63006 - 30 1.61e-06 CACAACGATG TGTACTAACCACTATACTAAGATGGCA TATGATTTTA chrV:434384-434762 + 64 2.29e-06 CACAACGATG TGTACTAACCACTATACTAAGATGGCG ACTTTTCAAT chrV:77469-79931 - 63 2.63e-06 TCTTGTACAA GGTTCTACCGACGACACCATCGATGGA CCATGTTACA chrXI:1-1055 - 70 3.01e-06 ACAG GGTATAAACCGCTGAGGCAAGTGCCGT GAATAATGAT chrXI:430478-431646 + 35 3.01e-06 TCAGATAAAA AATTTTTCGCACTTCGCTAATCACCCA TATAGAACAT chrIV:1075297-1075746 + 48 4.47e-06 GTGAAGGCAA CGTGATAGCCGCTACACTATTGGAACA ATATTACGGA chrXIII:463306-463886 - 7 4.76e-06 GACAAGCGCC CATTCTGACCATTAAACTATCACGGAC AAATTT chrXII:459655-460680 + 67 1.85e-05 ATCTTACAAC TCCGCATACCGCGTCGCCGCGTCGCCG CGTCGCC chrVII:541611-542176 - 6 3.81e-05 GAAAGCGTGA TGTGATAGCCGTTACACTATATCGGAT GGTAA chrIV:980746-981250 + 74 5.10e-05 AAAAGATTTC TAATCTTTCGCCTTAACCACTCGGCCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYTWMCCACTRVRCYAHNNRVSCW MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrVII:774128-774617 7.9e-13 25_[-2]_48 chrXIII:768181-768630 7.9e-13 60_[+2]_13 chrX:197171-197271 7.9e-13 18_[+2]_55 chrVI:204794-205200 3.3e-12 23_[+2]_50 chrI:166051-166571 7e-12 4_[-2]_69 chrXV:854010-854422 7e-12 67_[+2]_6 chrXII:214699-215148 7e-12 56_[+2]_17 chrXII:1051888-1052361 1.1e-10 44_[+2]_29 chrV:443043-443494 1.1e-10 31_[+2]_42 chrIX:183281-183710 1.1e-10 42_[+2]_31 chrX:523872-523972 5.4e-10 22_[+2]_51 chrIV:1305428-1305911 5.4e-10 9_[-2]_64 chrVI:162039-162447 7.4e-10 33_[-2]_40 chrVI:180694-181313 7.4e-10 65_[+2]_8 chrX:531580-531680 7.4e-10 5_[-2]_68 chrIV:992616-993060 7.4e-10 42_[-2]_31 chrVII:845339-845917 7.4e-10 69_[-2]_4 chrVII:930799-931213 7.4e-10 41_[+2]_32 chrIV:83302-83813 7.4e-10 39_[-2]_34 chrXII:731916-732261 1.2e-09 50_[-2]_23 chrX:617758-617858 1.2e-09 21_[-2]_52 chrXVI:572025-572562 1.6e-09 24_[-2]_49 chrXIV:374715-375111 1.6e-09 4_[-2]_69 chrIX:300030-300509 1.6e-09 55_[+2]_18 chrIV:1352292-1352733 1.6e-09 50_[+2]_23 chrVI:226501-226928 1.6e-09 70_[+2]_3 chrXIII:183721-184170 1.6e-09 47_[+2]_26 chrVII:122041-122555 1.6e-09 19_[-2]_54 chrX:378129-378229 2.4e-09 60_[-2]_13 chrXIII:195912-196411 2.4e-09 33_[+2]_40 chrXV:663532-664212 2.4e-09 37_[+2]_36 chrXI:379472-379924 2.4e-09 30_[-2]_43 chrV:469267-469704 2.4e-09 20_[-2]_53 chrVII:823282-823693 2.4e-09 43_[-2]_30 chrVII:412083-412568 2.4e-09 66_[+2]_7 chrVIII:85092-85565 2.4e-09 67_[+2]_6 chrXII:687652-688138 2.4e-09 61_[+2]_12 chrVIII:358279-358793 3.6e-09 57_[+2]_16 chrII:36186-36595 3.6e-09 56_[-2]_17 chrVIII:237750-238122 3.6e-09 27_[+2]_46 chrVI:157709-158252 3.6e-09 51_[+2]_22 chrXVI:622332-622842 3.6e-09 68_[+2]_5 chrXIII:352108-352494 3.6e-09 27_[-2]_46 chrII:266165-266655 4.1e-09 16_[-2]_57 chrXV:353896-354318 4.1e-09 30_[+2]_43 chrVI:101154-101604 4.7e-09 45_[-2]_28 chrXI:83963-84446 7.7e-09 52_[-2]_21 chrII:9372-9880 7.7e-09 5_[-2]_68 chrX:424296-424396 7.7e-09 24_[+2]_49 chrXV:594210-594650 8.7e-09 19_[+2]_54 chrXII:628174-628630 9.9e-09 29_[-2]_44 chrVII:857231-857667 9.9e-09 66_[+2]_7 chrXII:784146-784556 9.9e-09 51_[-2]_22 chrVII:205311-205808 9.9e-09 10_[-2]_63 chrXIV:96031-96578 1.3e-08 32_[+2]_41 chrII:347402-347895 1.4e-08 3_[-2]_70 chrXIII:572751-573146 1.8e-08 31_[+2]_42 chrX:422627-422727 1.8e-08 35_[-2]_38 chrX:390862-390962 1.8e-08 58_[+2]_15 chrIII:168091-168619 2.2e-08 41_[+2]_32 chrVII:779414-779876 2.2e-08 19_[-2]_54 chrIV:644988-645375 3.8e-08 67_[+2]_6 chrVIII:134050-134560 3.8e-08 64_[-2]_9 chrXII:448323-449023 3.8e-08 72_[+2]_1 chrXII:975787-976249 4.7e-08 62_[+2]_11 chrXV:228099-228616 4.7e-08 22_[-2]_51 chrIII:127541-127940 4.7e-08 24_[-2]_49 chrIV:1256823-1257285 5.2e-08 49_[+2]_24 chrV:130833-131439 5.8e-08 41_[+2]_32 chrXVI:810445-810875 7.8e-08 64_[-2]_9 chrIV:520598-521413 1.3e-07 15_[-2]_58 chrVIII:466788-467255 1.8e-07 17_[-2]_56 chrVII:661533-661939 1.8e-07 61_[-2]_12 chrVII:1004013-1004411 1.8e-07 52_[-2]_21 chrIII:123370-123865 2.4e-07 55_[+2]_18 chrXI:46568-47005 2.6e-07 44_[+2]_29 chrII:350559-351120 2.8e-07 36_[-2]_37 chrXI:162285-162763 5.5e-07 58_[+2]_15 chrXIII:747762-748137 5.5e-07 38_[+2]_35 chrIV:568477-569267 5.5e-07 58_[-2]_15 chrII:326583-327165 7.6e-07 15_[+2]_58 chrVII:73681-74194 1.1e-06 50_[-2]_23 chrXIII:923204-924377 1.2e-06 31_[+2]_42 chrXI:321756-322009 1.4e-06 40_[-2]_33 chrII:642860-643265 1.5e-06 40_[+2]_33 chrXI:513201-513614 1.5e-06 20_[+2]_53 chrII:405681-406252 1.5e-06 42_[-2]_31 chrXV:571730-572167 1.5e-06 58_[-2]_15 chrX:355146-355246 1.5e-06 70_[-2]_3 chrXII:426918-427440 1.5e-06 1_[-2]_72 chrVII:531443-531800 1.5e-06 37_[-2]_36 chrVIII:62542-63006 1.6e-06 29_[-2]_44 chrV:434384-434762 2.3e-06 63_[+2]_10 chrV:77469-79931 2.6e-06 62_[-2]_11 chrXI:1-1055 3e-06 69_[-2]_4 chrXI:430478-431646 3e-06 34_[+2]_39 chrIV:1075297-1075746 4.5e-06 47_[+2]_26 chrXIII:463306-463886 4.8e-06 6_[-2]_67 chrXII:459655-460680 1.8e-05 66_[+2]_7 chrVII:541611-542176 3.8e-05 5_[-2]_68 chrIV:980746-981250 5.1e-05 73_[+2] -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYTWMCCACTRVRCYAHNNRVSCW MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SSCTYTWMCCACTRVRCYAHNNRVSCW width=27 seqs=101 chrVII:774128-774617 ( 26) CGCGCTACCGACTACGCCACACGCCCA 1 chrXIII:768181-768630 ( 61) CGCGCTACCGACTACGCCACACGCCCA 1 chrX:197171-197271 ( 19) CGCGCTACCGACTACGCCACACGCCCT 1 chrVI:204794-205200 ( 24) CGCGCTACCGACTACGCCACACGCCCG 1 chrI:166051-166571 ( 5) CGCGCTACCAACTGCGCCATGTGCCCA 1 chrXV:854010-854422 ( 68) CGCGCTACCAACTGCGCCATGTGCCCT 1 chrXII:214699-215148 ( 57) CGCGCTACCAACTGCGCCATGTGCCCT 1 chrXII:1051888-1052361 ( 45) GCCTTAACCAACTGGGCCAAGAGACCA 1 chrV:443043-443494 ( 32) GCCTTAACCAACTGGGCCAAGAGACCA 1 chrIX:183281-183710 ( 43) GCCTTAACCAACTGGGCCAAGAGACCA 1 chrX:523872-523972 ( 23) CGCCTTAACCACTCGGCCAAGTTGCCT 1 chrIV:1305428-1305911 ( 10) CGCCTTAACCACTCGGCCAAGTTGCCT 1 chrVI:162039-162447 ( 34) GGATTTTACCACTAAACCACTTGCGCT 1 chrVI:180694-181313 ( 66) GGATTTTACCACTAAACCACTTGCGCT 1 chrX:531580-531680 ( 6) GGATTTTACCACTAAACCACTTGCGCT 1 chrIV:992616-993060 ( 43) GGATTTTACCACTAAACCACTTGCGCT 1 chrVII:845339-845917 ( 70) GGATTTTACCACTAAACCACTTGCGCT 1 chrVII:930799-931213 ( 42) GGATTTTACCACTAAACCACTTGCGCT 1 chrIV:83302-83813 ( 40) GGATTTTACCACTAAACCACTTGCGCT 1 chrXII:731916-732261 ( 51) GCCTTAAACCACTCGGCCAAACTCCCA 1 chrX:617758-617858 ( 22) GCCTTAAACCACTCGGCCAAACTCCCA 1 chrXVI:572025-572562 ( 25) GGATTTTACCACTAAACCACTTGCGCG 1 chrXIV:374715-375111 ( 5) CGCTCTCCCAACTGAGCTAAGTCCGCT 1 chrIX:300030-300509 ( 56) CGCGCTACCGATTGCGCCAACAAGGCT 1 chrIV:1352292-1352733 ( 51) CGCGCTACCGATTGCGCCAACAAGGCT 1 chrVI:226501-226928 ( 71) CGCGCTACCGATTGCGCCAACAAGGCA 1 chrXIII:183721-184170 ( 48) GGATTTTACCACTAAACCACTTGCGCG 1 chrVII:122041-122555 ( 20) CGCGCTACCGATTGCGCCAACAAGGCT 1 chrX:378129-378229 ( 61) GCCATAACCGACTAGACCACGAAACCT 1 chrXIII:195912-196411 ( 34) GAATCATACCACTAGACCACACGCCCT 1 chrXV:663532-664212 ( 38) GCCATAACCGACTAGACCACGAAACCA 1 chrXI:379472-379924 ( 31) GCCATAACCGACTAGACCACGAAACCT 1 chrV:469267-469704 ( 21) GCCATAACCGACTAGACCACGAAACCA 1 chrVII:823282-823693 ( 44) GCCATAACCGACTAGACCACGAAACCA 1 chrVII:412083-412568 ( 67) GCCATAACCGACTAGACCACGAAACCA 1 chrVIII:85092-85565 ( 68) GCCATAACCGACTAGACCACGAAACCA 1 chrXII:687652-688138 ( 62) GCCATAACCGACTAGACCACGAAACCT 1 chrVIII:358279-358793 ( 58) CGCTCTCCCAACTGAGCTAAATCCGCT 1 chrII:36186-36595 ( 57) CGCTCTCCCAACTGAGCTAAATCCGCT 1 chrVIII:237750-238122 ( 28) CGCTCTCCCAACTGAGCTAAATCCGCT 1 chrVI:157709-158252 ( 52) CGCTCTCCCAACTGAGCTAAATCCGCT 1 chrXVI:622332-622842 ( 69) CGCTCTCCCAACTGAGCTAAATCCGCA 1 chrXIII:352108-352494 ( 28) CGCTCTCCCAACTGAGCTAAATCCGCT 1 chrII:266165-266655 ( 17) CGCCTTACCAACTTGGCCATAGAAGCA 1 chrXV:353896-354318 ( 31) CGCCTTACCAACTTGGCCATAGAAGCA 1 chrVI:101154-101604 ( 46) GAATCATACCACTAGACCACACGCCCG 1 chrXI:83963-84446 ( 53) GCCTTAGACCACTCGGCCAACCCTCCA 1 chrII:9372-9880 ( 6) GCCTTAGACCACTCGGCCAACCCTCCA 1 chrX:424296-424396 ( 25) GCCTTAGACCACTCGGCCAACCCTCCA 1 chrXV:594210-594650 ( 20) AATTCTAACCACTGAACCACTTGCGCG 1 chrXII:628174-628630 ( 30) GCCTTAGACCGCTCGGCCAAACAACCA 1 chrVII:857231-857667 ( 67) GCCTTAGACCGCTCGGCCAAACAACCA 1 chrXII:784146-784556 ( 52) CGCCTTAACCACTCGGCCACTGGGACG 1 chrVII:205311-205808 ( 11) GCCTTAGACCGCTCGGCCAAACAACCA 1 chrXIV:96031-96578 ( 33) GATGATAACCACTACACTAACCGCCCA 1 chrII:347402-347895 ( 4) GCCTTAGACCACTCGGCCAACCCTCCG 1 chrXIII:572751-573146 ( 32) CGCTCTTCCTACTGAGCTACTGAAGCT 1 chrX:422627-422727 ( 36) CGCTCTTCCTACTGAGCTACTGAAGCA 1 chrX:390862-390962 ( 59) CGCTCTTCCTACTGAGCTACTGAAGCA 1 chrIII:168091-168619 ( 42) AGTGATAACCACTACACTATAGGACCA 1 chrVII:779414-779876 ( 20) GATGATAACCACTACACTAACCGCCCG 1 chrIV:644988-645375 ( 68) AGTGATAACCACTACACTATAGGACCG 1 chrVIII:134050-134560 ( 65) AGTGATAACCACTACACTATAGGACCG 1 chrXII:448323-449023 ( 73) AGTGATAACCACTACACTATAGGACCG 1 chrXII:975787-976249 ( 63) GCCTTAACCAACTTGGCCATGGAGTCT 1 chrXV:228099-228616 ( 23) GCCTTAACCAACTTGGCCATGGAGTCT 1 chrIII:127541-127940 ( 25) GCCTTAACCAACTTGGCCATGGAGTCA 1 chrIV:1256823-1257285 ( 50) AATTCTAACCACTGAACCACTTTCGCT 1 chrV:130833-131439 ( 42) AGTGATAACCACTACACTATAAAACCT 1 chrXVI:810445-810875 ( 65) GCCTTAACCAACTTGGCCATGGAGTCG 1 chrIV:520598-521413 ( 16) AGTGATAACCACTACACTATAGGACCC 1 chrVIII:466788-467255 ( 18) ACGCTCTACCACTAAGCTAAGGAGGCT 1 chrVII:661533-661939 ( 62) ACGCTCTACCACTAAGCTAAGGAGGCA 1 chrVII:1004013-1004411 ( 53) ACGCTCTACCACTAAGCTAAGGAGGCA 1 chrIII:123370-123865 ( 56) GAATCATACCTCTAGACCACACGCCCT 1 chrXI:46568-47005 ( 45) ATGCCTTACCACTTGGCCAAAAGGGCT 1 chrII:350559-351120 ( 37) AGTGATAACCACTACACTATAAAACCC 1 chrXI:162285-162763 ( 59) ACGCGTTGCCATTACGCCACGCGAGCT 1 chrXIII:747762-748137 ( 39) ACGCGTTGCCATTACGCCACGCGAGCT 1 chrIV:568477-569267 ( 59) ACGCGTTGCCATTACGCCACGCGAGCT 1 chrII:326583-327165 ( 16) GTCTTGAACCACTGGACCATTGGACCC 1 chrVII:73681-74194 ( 51) CAATTTTACAACTAAACTATGAAGCAA 1 chrXIII:923204-924377 ( 32) GGTATAGACCACTGAGGCAAGTGCCGT 1 chrXI:321756-322009 ( 41) ACCCTTAAAAACTCCGCTATGAAGGCA 1 chrII:642860-643265 ( 41) CTGCGCTACCACTGCGCCATACGAGCT 1 chrXI:513201-513614 ( 21) CATTCTGACCATTAAACTATCACGGAA 1 chrII:405681-406252 ( 43) CATTCTGACCATTAAACTATCACGGAA 1 chrXV:571730-572167 ( 59) CATTCTGACCATTAAACTATCACGGAT 1 chrX:355146-355246 ( 71) CATTCTGACCATTAAACTATCACGGAA 1 chrXII:426918-427440 ( 2) CATTCTGACCATTAAACTATCACGGAT 1 chrVII:531443-531800 ( 38) CATTCTGACCATTAAACTATCACGGAA 1 chrVIII:62542-63006 ( 30) TGTACTAACCACTATACTAAGATGGCA 1 chrV:434384-434762 ( 64) TGTACTAACCACTATACTAAGATGGCG 1 chrV:77469-79931 ( 63) GGTTCTACCGACGACACCATCGATGGA 1 chrXI:1-1055 ( 70) GGTATAAACCGCTGAGGCAAGTGCCGT 1 chrXI:430478-431646 ( 35) AATTTTTCGCACTTCGCTAATCACCCA 1 chrIV:1075297-1075746 ( 48) CGTGATAGCCGCTACACTATTGGAACA 1 chrXIII:463306-463886 ( 7) CATTCTGACCATTAAACTATCACGGAC 1 chrXII:459655-460680 ( 67) TCCGCATACCGCGTCGCCGCGTCGCCG 1 chrVII:541611-542176 ( 6) TGTGATAGCCGTTACACTATATCGGAT 1 chrIV:980746-981250 ( 74) TAATCTTTCGCCTTAACCACTCGGCCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYTWMCCACTRVRCYAHNNRVSCW MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 27 n= 44400 bayes= 6.67672 E= 1.3e-258 -81 93 116 -266 -90 76 138 -340 -118 149 -124 -28 -140 -43 29 72 -152 105 -224 57 -8 -224 -423 106 72 -143 -33 -23 80 109 -191 -498 -498 239 -423 -1330 -59 165 -7 -340 154 -423 -143 -498 -1330 219 -1330 -108 -1330 -1330 -324 164 72 -54 46 -166 14 67 85 -398 54 -1330 155 -1330 -1330 239 -324 -1330 -1330 179 -1330 19 166 -1330 -423 -1330 19 89 -1330 -8 -8 -7 85 -74 -13 35 16 -23 6 9 112 -218 2 89 62 -266 -398 135 132 -298 -181 224 -265 -1330 37 -224 -43 41 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYTWMCCACTRVRCYAHNNRVSCW MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 27 nsites= 101 E= 1.3e-258 0.178218 0.356436 0.415842 0.049505 0.168317 0.316832 0.485149 0.029703 0.138614 0.524752 0.079208 0.257426 0.118812 0.138614 0.227723 0.514851 0.108911 0.386139 0.039604 0.465347 0.297030 0.039604 0.009901 0.653465 0.514851 0.069307 0.148515 0.267327 0.544554 0.396040 0.049505 0.009901 0.009901 0.980198 0.009901 0.000000 0.207921 0.584158 0.178218 0.029703 0.910891 0.009901 0.069307 0.009901 0.000000 0.851485 0.000000 0.148515 0.000000 0.000000 0.019802 0.980198 0.514851 0.128713 0.257426 0.099010 0.346535 0.297030 0.336634 0.019802 0.455446 0.000000 0.544554 0.000000 0.000000 0.980198 0.019802 0.000000 0.000000 0.643564 0.000000 0.356436 0.990099 0.000000 0.009901 0.000000 0.356436 0.346535 0.000000 0.297030 0.297030 0.178218 0.336634 0.188119 0.287129 0.237624 0.207921 0.267327 0.326733 0.198020 0.405941 0.069307 0.316832 0.346535 0.287129 0.049505 0.019802 0.475248 0.465347 0.039604 0.089109 0.881188 0.029703 0.000000 0.405941 0.039604 0.138614 0.415842 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYTWMCCACTRVRCYAHNNRVSCW MEME-2 regular expression -------------------------------------------------------------------------------- [GC][GC][CT][TG][TC][TA][AT][AC]C[CA]ACT[AG][AGC][GA]C[CT]A[ACT][GA][ATCG][GA][CAG][CG]C[TA] -------------------------------------------------------------------------------- Time 665.52 secs. ******************************************************************************** ******************************************************************************** MOTIF ARADAAAAAAAAAAAARAAAA MEME-3 width = 21 sites = 79 llr = 880 E-value = 4.9e-049 ******************************************************************************** -------------------------------------------------------------------------------- Motif ARADAAAAAAAAAAAARAAAA MEME-3 Description -------------------------------------------------------------------------------- Simplified A 758378856879969838a77 pos.-specific C 31:::::2:1:1:1:::1:2: probability G :4131212312::3:16::12 matrix T ::132:221:1:111111::: bits 2.4 2.2 1.9 1.7 * Relative 1.5 * Entropy 1.2 * * * (16.1 bits) 1.0 * * * ** * * * 0.7 *** ** ** ** ******* 0.5 *** *** ************* 0.2 ********************* 0.0 --------------------- Multilevel AAAGAAAAAAAAAAAAGAAAA consensus CG AT G G G A G sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARADAAAAAAAAAAAARAAAA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXIV:88538-90049 - 76 5.44e-12 TGTG AGAGAAAAAAAAAAAAGAAAA TAAAGGAAAA chrXIV:413541-416536 - 62 1.24e-10 AAAAAAAAAA AAAAAAAAAAAAAAAAGAAAA AAGGTCTCTC chrXII:48721-49119 + 2 2.40e-10 A AAAAAAAAGAAAAAAAGAAAA GGGTGTCTAA chrXIV:307048-307364 - 65 1.25e-09 CGCACGGAAA AAAAAAAAAAAAAGAAGAAAG AAATGAGGTA chrX:58712-58812 + 51 1.94e-09 CAAGAGCGTG AAAAAAAAAAAAAAAAAAAAA TTAATTGCTA chrX:538365-538465 - 62 3.62e-09 TTTTTTCTAT AAAGAAACGAAAAAAAAAAAA TAATCAACGT chrXVI:188515-188973 + 10 7.28e-09 CATCCCATC AAAAAAAATAAAAAAAGAAAA CCCTTGCAGA chrXVI:819337-819982 - 49 8.69e-09 TTGAGATGTA AAAAAAAAAAAAAATAGAAAA TAGTAAGTCC chrX:636805-636905 + 60 1.45e-08 AATGGGAAGC CAATAAACAAAAAAAAAAAAA TTAGAGTAGA chrVII:363916-364450 - 8 1.72e-08 ACCTATATAA CGAAAAAAAAAAAAATGAAAA CTGAAGA chrXIII:631796-634854 + 65 3.19e-08 GACTTATTTG AGAGTAAGAAGAAGAAGAACA ATATCAAGTT chrXIV:444477-444773 - 79 4.33e-08 G AAAATAACAAAAAAAAAAAAA AAGTCAATTT chrXV:1003921-1004979 - 1 5.80e-08 ATAAAAGTAC AAGAAAAGGAGAAGAAGAAAA chrVIII:222609-222862 - 48 7.70e-08 AAGACAACAA CAATAAAGGAAAAAAAAAACA AAGAAATTTT chrXII:6-281 + 37 8.86e-08 TTTCTGACCG AAATTAAAAAAAAAATGAAAA TGAAACCCTG chrVII:400806-401755 - 58 1.73e-07 TAAAGTAAAA AAATTAAGAATAAAAAGAAAA ATGGGTGCTT chrIV:322203-323631 + 10 1.97e-07 AATTTCCAG AAAGAGAAACGAAGAAGAAGA CGCCAAGAAC chrXII:657702-658726 - 2 1.97e-07 TGCAGCTACA CGAGAAAAAAAAACAAAAACG A chrV:225450-225701 + 24 2.24e-07 TTTTCTTTTT CCAGAAAAAGAAAGAAAAAAG CCGGCGGTCG chrXIII:696456-696864 + 49 2.88e-07 AATGAAAAAT AAATAAATAAACAAAGGAAAA TAAACAACAA chrXVI:880073-880557 + 7 3.68e-07 CTCTTT CGAGAAAAAGAAAGAGAAAAG AAATGGTCTC chrXIII:540198-540707 - 56 4.15e-07 ATGACTCAAC AAAAAAATAAAAATAAGCAAA CGGAAAAACC chrVIII:115413-116428 - 53 4.67e-07 GTCTTTTAAC AGATAAACAAGCAAAAGAAGG AACTATCATA chrXII:373106-373485 + 70 5.91e-07 AAATACGGAG AAAATATAAAAAAAAAGTAAA TACAGAAAAT chrXIII:145805-146263 - 27 5.91e-07 AAAGCAAAAA AGGTAAACAAGAAAAGGAAGA AAAGAACCCA chrVII:687567-687905 - 45 6.63e-07 GAAAAGAGGT AAACAAACAAAAACAAGAACA TGGATACAAA chrIX:394752-395078 + 69 6.63e-07 ATTCCGAGAA ACTGAAAGGCAAAAAAGAAAA AGCCTTTTTT chrXII:1012034-1012309 + 65 7.43e-07 GCACACACAC AAACAAACGAGAAGAAAAAAG CGCGTGGTAC chrXVI:491502-491788 + 57 1.16e-06 AAACAGGTTC AAAGAAACGAGAATAAACAAA CAACGAACGC chrVII:541611-542176 - 79 1.29e-06 T CAAGAGGTAAGAAAAAGAACA CTCCGATACG chrIX:68204-69590 + 1 1.44e-06 . CAAAAATTAAAACAAAGAAAA CTGCCAAACT chrII:44993-45322 + 14 1.60e-06 TATCAAAATT AGGAAAAAGAAATGAAGAACG ATGAGCCAAA chrX:531580-531680 - 78 1.60e-06 TT CCAGAAAAAAAGAAAAGAAAC TGCGCAAGCC chrVII:334562-334860 - 40 1.96e-06 TTTTTCAATG AGAGAATAACGAAAAAGAAAC ATGCTTTTAA chrXI:307027-307421 + 76 2.18e-06 ACAAATCCGT AAATTAGAAAAAAAAACAAAA AAAA chrXI:490741-491356 - 62 2.18e-06 TTACTCAATA ACTGAAAAGATAATAAGAAAA TTATAAAAGT chrIV:667745-668227 + 48 2.41e-06 CTATTTTTAA CAATAGAGGAGAAAAAATAAA AATGGTCTCT chrXVI:121166-121565 - 26 2.41e-06 TATTCGAAAA AAAGTGTAAACAAGAAGAAAA CGTGCCAATT chrVII:648744-649419 + 51 2.66e-06 AAAAGATCTT CGGATAAAAATAAAAAGAAGG CGGTGAAAAC chrXVI:259336-259621 - 1 2.66e-06 TAAGCAGAAG CGAAAAATAAAAAGAAATAGG chrIV:129909-130987 - 51 2.94e-06 AGCCAAGTGG AGAAAGAAGAGAACTAGAAGA CTTAAGAGAA chrVII:554813-557507 + 33 3.25e-06 TACGCAGAGG AGATAGAAGAAAAGTAGGAAG TTACCGTTTA chrXII:833601-833943 - 16 3.58e-06 CTTCCCTTAT GAAAAAAAAAAAAATGGAAAA CTTAAAAATC chrXI:108492-109061 - 78 3.94e-06 GC AGAGCAATAAAATGAGGAAAA TGGCTAACCT chrXII:780714-781876 - 38 3.94e-06 GCCACTGTTA AGATTAACAAAAAATTGAACA AGGCCGGTAA chrXII:1028230-1028545 - 9 4.77e-06 AGTAACTTTC AGATTAAGACAAGGAAGAAAG AAGGAAAA chrXIII:659215-659584 - 38 4.77e-06 GAATCATATT AGAGAGTAAATAAGAACAAAA ATGGTAAACA chrXII:734702-735427 + 12 4.77e-06 GTACTTAAAT AAATAAATAAACAATAAAACA ATCAATAAAT chrXVI:821630-822238 - 16 4.77e-06 TCAAAAACAA CAAAAGAATGAAAGAAAAAAG AATCAGAATT chrIX:2-222 + 70 5.23e-06 GCTTTCTGAC CGAAATTAAAAAAAATGAAAA TGAAATCCTG chrV:166709-167632 + 65 5.74e-06 TATCGGGTGA AAAGAAAGACACACAAGAAGG AGAACACTCA chrIII:107135-107839 + 16 7.54e-06 ACGTTTCCTG AGTATAAGAAAAATAAGCAAA ATAAGTATAC chrXIV:715953-717059 - 62 9.83e-06 GAAACCGAGG CAGAAAAGAAAAAGAGACAAG TTAAAAATTG chrVIII:562289-562577 - 3 9.83e-06 CGGCTTTCTG ACCGAAATTAAAAAAAAAAAA TG chrXIII:861172-861531 - 77 1.07e-05 CCA CAAAATAAGGGAAAAAAAACA CTGGAAATAA chrXII:875259-875641 - 75 1.07e-05 AAGGA AGTTGATAAAAAAAAAGTAAA GAACTCCTCA chrV:423101-425304 + 62 1.17e-05 AGAGTTAGAT CCAGAGAAGACAGAAAGAACA GAGCTCCTCC chrIX:210511-211211 + 77 1.27e-05 CTGCAATGAG AATGGAAAAAAAATTAAAAAA ACT chrXIII:286590-287067 - 69 1.50e-05 TATGCCGCCT ACAAAAACTAAATAAGAAAAA TATGCCGCAC chrXV:464247-464850 - 55 1.50e-05 GACCAATAGG AAATAAATAATCAAAAATAAA AGGGGCGAGC chrX:703254-703354 - 68 1.50e-05 TTCAGTTCAG CAGGAAATAAACAAATAAACA AACATTAAAA chrVIII:384101-386961 - 60 1.63e-05 GCTTCAATTA AGGTGAATAAAAAGAATAAGA TATTGAAAAT chrXI:458375-459005 - 33 1.63e-05 ATTGTTGAAC ACAATATAAAAAAATATAAAA TATGGTTGCT chrII:198099-198599 - 53 1.63e-05 ACTTCAAAGT ACATTGAAAAAAAAAGGAAAT GTAATCAATT chrX:233702-233802 - 25 1.77e-05 CATTGGGCCA CGAGGAACAAGAATATAAAGA TCTCTGAGGG chrXIII:253286-253573 + 2 1.92e-05 C CAAAAATTGAAAATAAGTACG GGAACGAGGT chrXII:932103-932495 + 70 2.08e-05 ATGTAGAGAA ACAGAAACGAGGATAATAAAA TCGGTTTTTG chrVIII:401055-401363 - 63 2.25e-05 TTACAATTTT CATTAGGAGAAAAAAAGGAAA GATGCCCTGT chrVII:14214-14593 + 18 2.25e-05 AACTTCGTCT CGGGAAAATGAAAAATGTAAA CAAGAATTTC chrXIII:747762-748137 - 75 2.25e-05 TCATC AGATGAAAAAGACGAAAGAAA CATATGACTA chrXI:313165-313669 + 12 2.85e-05 CAGACCATGA AGGCTAAAGGAAAAAAATAAA ATGCCATCTC chrIX:370217-370639 + 4 3.31e-05 AGT ACATAAGATCGAAGTAGAAAA AATATAGATT chrVII:544394-546119 + 19 3.31e-05 CACTGATACT AGAATATGGAAATAAGAAAAG TTGCTAAGTA chrVII:736198-736634 - 44 3.85e-05 TTCAGCCAGG AAATTATTTAAAAAAACAACA CTCACGATGG chrII:486687-487024 + 24 3.85e-05 AGAAAGACCA AAAGCGAAGAAGCGAAGAAGA GGACTTCTCT chrVII:316753-317417 - 18 4.14e-05 TCTCCTATAA AAAGTAAATATATGAGAAAAA TTTCCGCCCA chrXIII:759698-763194 + 44 5.15e-05 GGACAAGTTA AGATCATTGATAGAAAGAAAA ATTTGGTTAA chrXV:259330-259970 - 36 6.35e-05 ACATTTACAA AGATAGAAAGGAAATATCAAA ACTATAAGAG chrV:18709-19256 - 78 7.28e-05 AT CAAGATAGGCACATAAGAAGG CACGAAACTA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARADAAAAAAAAAAAARAAAA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:88538-90049 5.4e-12 75_[-3]_4 chrXIV:413541-416536 1.2e-10 61_[-3]_18 chrXII:48721-49119 2.4e-10 1_[+3]_78 chrXIV:307048-307364 1.3e-09 64_[-3]_15 chrX:58712-58812 1.9e-09 50_[+3]_29 chrX:538365-538465 3.6e-09 61_[-3]_18 chrXVI:188515-188973 7.3e-09 9_[+3]_70 chrXVI:819337-819982 8.7e-09 48_[-3]_31 chrX:636805-636905 1.4e-08 59_[+3]_20 chrVII:363916-364450 1.7e-08 7_[-3]_72 chrXIII:631796-634854 3.2e-08 64_[+3]_15 chrXIV:444477-444773 4.3e-08 78_[-3]_1 chrXV:1003921-1004979 5.8e-08 [-3]_79 chrVIII:222609-222862 7.7e-08 47_[-3]_32 chrXII:6-281 8.9e-08 36_[+3]_43 chrVII:400806-401755 1.7e-07 57_[-3]_22 chrIV:322203-323631 2e-07 9_[+3]_70 chrXII:657702-658726 2e-07 1_[-3]_78 chrV:225450-225701 2.2e-07 23_[+3]_56 chrXIII:696456-696864 2.9e-07 48_[+3]_31 chrXVI:880073-880557 3.7e-07 6_[+3]_73 chrXIII:540198-540707 4.1e-07 55_[-3]_24 chrVIII:115413-116428 4.7e-07 52_[-3]_27 chrXII:373106-373485 5.9e-07 69_[+3]_10 chrXIII:145805-146263 5.9e-07 26_[-3]_53 chrVII:687567-687905 6.6e-07 44_[-3]_35 chrIX:394752-395078 6.6e-07 68_[+3]_11 chrXII:1012034-1012309 7.4e-07 64_[+3]_15 chrXVI:491502-491788 1.2e-06 56_[+3]_23 chrVII:541611-542176 1.3e-06 78_[-3]_1 chrIX:68204-69590 1.4e-06 [+3]_79 chrII:44993-45322 1.6e-06 13_[+3]_66 chrX:531580-531680 1.6e-06 77_[-3]_2 chrVII:334562-334860 2e-06 39_[-3]_40 chrXI:307027-307421 2.2e-06 75_[+3]_4 chrXI:490741-491356 2.2e-06 61_[-3]_18 chrIV:667745-668227 2.4e-06 47_[+3]_32 chrXVI:121166-121565 2.4e-06 25_[-3]_54 chrVII:648744-649419 2.7e-06 50_[+3]_29 chrXVI:259336-259621 2.7e-06 [-3]_79 chrIV:129909-130987 2.9e-06 50_[-3]_29 chrVII:554813-557507 3.2e-06 32_[+3]_47 chrXII:833601-833943 3.6e-06 15_[-3]_64 chrXI:108492-109061 3.9e-06 77_[-3]_2 chrXII:780714-781876 3.9e-06 37_[-3]_42 chrXII:1028230-1028545 4.8e-06 8_[-3]_71 chrXIII:659215-659584 4.8e-06 37_[-3]_42 chrXII:734702-735427 4.8e-06 11_[+3]_68 chrXVI:821630-822238 4.8e-06 15_[-3]_64 chrIX:2-222 5.2e-06 69_[+3]_10 chrV:166709-167632 5.7e-06 64_[+3]_15 chrIII:107135-107839 7.5e-06 15_[+3]_64 chrXIV:715953-717059 9.8e-06 61_[-3]_18 chrVIII:562289-562577 9.8e-06 2_[-3]_77 chrXIII:861172-861531 1.1e-05 76_[-3]_3 chrXII:875259-875641 1.1e-05 74_[-3]_5 chrV:423101-425304 1.2e-05 61_[+3]_18 chrIX:210511-211211 1.3e-05 76_[+3]_3 chrXIII:286590-287067 1.5e-05 68_[-3]_11 chrXV:464247-464850 1.5e-05 54_[-3]_25 chrX:703254-703354 1.5e-05 67_[-3]_12 chrVIII:384101-386961 1.6e-05 59_[-3]_20 chrXI:458375-459005 1.6e-05 32_[-3]_47 chrII:198099-198599 1.6e-05 52_[-3]_27 chrX:233702-233802 1.8e-05 24_[-3]_55 chrXIII:253286-253573 1.9e-05 1_[+3]_78 chrXII:932103-932495 2.1e-05 69_[+3]_10 chrVIII:401055-401363 2.3e-05 62_[-3]_17 chrVII:14214-14593 2.3e-05 17_[+3]_62 chrXIII:747762-748137 2.3e-05 74_[-3]_5 chrXI:313165-313669 2.8e-05 11_[+3]_68 chrIX:370217-370639 3.3e-05 3_[+3]_76 chrVII:544394-546119 3.3e-05 18_[+3]_61 chrVII:736198-736634 3.8e-05 43_[-3]_36 chrII:486687-487024 3.8e-05 23_[+3]_56 chrVII:316753-317417 4.1e-05 17_[-3]_62 chrXIII:759698-763194 5.1e-05 43_[+3]_36 chrXV:259330-259970 6.4e-05 35_[-3]_44 chrV:18709-19256 7.3e-05 77_[-3]_2 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARADAAAAAAAAAAAARAAAA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ARADAAAAAAAAAAAARAAAA width=21 seqs=79 chrXIV:88538-90049 ( 76) AGAGAAAAAAAAAAAAGAAAA 1 chrXIV:413541-416536 ( 62) AAAAAAAAAAAAAAAAGAAAA 1 chrXII:48721-49119 ( 2) AAAAAAAAGAAAAAAAGAAAA 1 chrXIV:307048-307364 ( 65) AAAAAAAAAAAAAGAAGAAAG 1 chrX:58712-58812 ( 51) AAAAAAAAAAAAAAAAAAAAA 1 chrX:538365-538465 ( 62) AAAGAAACGAAAAAAAAAAAA 1 chrXVI:188515-188973 ( 10) AAAAAAAATAAAAAAAGAAAA 1 chrXVI:819337-819982 ( 49) AAAAAAAAAAAAAATAGAAAA 1 chrX:636805-636905 ( 60) CAATAAACAAAAAAAAAAAAA 1 chrVII:363916-364450 ( 8) CGAAAAAAAAAAAAATGAAAA 1 chrXIII:631796-634854 ( 65) AGAGTAAGAAGAAGAAGAACA 1 chrXIV:444477-444773 ( 79) AAAATAACAAAAAAAAAAAAA 1 chrXV:1003921-1004979 ( 1) AAGAAAAGGAGAAGAAGAAAA 1 chrVIII:222609-222862 ( 48) CAATAAAGGAAAAAAAAAACA 1 chrXII:6-281 ( 37) AAATTAAAAAAAAAATGAAAA 1 chrVII:400806-401755 ( 58) AAATTAAGAATAAAAAGAAAA 1 chrIV:322203-323631 ( 10) AAAGAGAAACGAAGAAGAAGA 1 chrXII:657702-658726 ( 2) CGAGAAAAAAAAACAAAAACG 1 chrV:225450-225701 ( 24) CCAGAAAAAGAAAGAAAAAAG 1 chrXIII:696456-696864 ( 49) AAATAAATAAACAAAGGAAAA 1 chrXVI:880073-880557 ( 7) CGAGAAAAAGAAAGAGAAAAG 1 chrXIII:540198-540707 ( 56) AAAAAAATAAAAATAAGCAAA 1 chrVIII:115413-116428 ( 53) AGATAAACAAGCAAAAGAAGG 1 chrXII:373106-373485 ( 70) AAAATATAAAAAAAAAGTAAA 1 chrXIII:145805-146263 ( 27) AGGTAAACAAGAAAAGGAAGA 1 chrVII:687567-687905 ( 45) AAACAAACAAAAACAAGAACA 1 chrIX:394752-395078 ( 69) ACTGAAAGGCAAAAAAGAAAA 1 chrXII:1012034-1012309 ( 65) AAACAAACGAGAAGAAAAAAG 1 chrXVI:491502-491788 ( 57) AAAGAAACGAGAATAAACAAA 1 chrVII:541611-542176 ( 79) CAAGAGGTAAGAAAAAGAACA 1 chrIX:68204-69590 ( 1) CAAAAATTAAAACAAAGAAAA 1 chrII:44993-45322 ( 14) AGGAAAAAGAAATGAAGAACG 1 chrX:531580-531680 ( 78) CCAGAAAAAAAGAAAAGAAAC 1 chrVII:334562-334860 ( 40) AGAGAATAACGAAAAAGAAAC 1 chrXI:307027-307421 ( 76) AAATTAGAAAAAAAAACAAAA 1 chrXI:490741-491356 ( 62) ACTGAAAAGATAATAAGAAAA 1 chrIV:667745-668227 ( 48) CAATAGAGGAGAAAAAATAAA 1 chrXVI:121166-121565 ( 26) AAAGTGTAAACAAGAAGAAAA 1 chrVII:648744-649419 ( 51) CGGATAAAAATAAAAAGAAGG 1 chrXVI:259336-259621 ( 1) CGAAAAATAAAAAGAAATAGG 1 chrIV:129909-130987 ( 51) AGAAAGAAGAGAACTAGAAGA 1 chrVII:554813-557507 ( 33) AGATAGAAGAAAAGTAGGAAG 1 chrXII:833601-833943 ( 16) GAAAAAAAAAAAAATGGAAAA 1 chrXI:108492-109061 ( 78) AGAGCAATAAAATGAGGAAAA 1 chrXII:780714-781876 ( 38) AGATTAACAAAAAATTGAACA 1 chrXII:1028230-1028545 ( 9) AGATTAAGACAAGGAAGAAAG 1 chrXIII:659215-659584 ( 38) AGAGAGTAAATAAGAACAAAA 1 chrXII:734702-735427 ( 12) AAATAAATAAACAATAAAACA 1 chrXVI:821630-822238 ( 16) CAAAAGAATGAAAGAAAAAAG 1 chrIX:2-222 ( 70) CGAAATTAAAAAAAATGAAAA 1 chrV:166709-167632 ( 65) AAAGAAAGACACACAAGAAGG 1 chrIII:107135-107839 ( 16) AGTATAAGAAAAATAAGCAAA 1 chrXIV:715953-717059 ( 62) CAGAAAAGAAAAAGAGACAAG 1 chrVIII:562289-562577 ( 3) ACCGAAATTAAAAAAAAAAAA 1 chrXIII:861172-861531 ( 77) CAAAATAAGGGAAAAAAAACA 1 chrXII:875259-875641 ( 75) AGTTGATAAAAAAAAAGTAAA 1 chrV:423101-425304 ( 62) CCAGAGAAGACAGAAAGAACA 1 chrIX:210511-211211 ( 77) AATGGAAAAAAAATTAAAAAA 1 chrXIII:286590-287067 ( 69) ACAAAAACTAAATAAGAAAAA 1 chrXV:464247-464850 ( 55) AAATAAATAATCAAAAATAAA 1 chrX:703254-703354 ( 68) CAGGAAATAAACAAATAAACA 1 chrVIII:384101-386961 ( 60) AGGTGAATAAAAAGAATAAGA 1 chrXI:458375-459005 ( 33) ACAATATAAAAAAATATAAAA 1 chrII:198099-198599 ( 53) ACATTGAAAAAAAAAGGAAAT 1 chrX:233702-233802 ( 25) CGAGGAACAAGAATATAAAGA 1 chrXIII:253286-253573 ( 2) CAAAAATTGAAAATAAGTACG 1 chrXII:932103-932495 ( 70) ACAGAAACGAGGATAATAAAA 1 chrVIII:401055-401363 ( 63) CATTAGGAGAAAAAAAGGAAA 1 chrVII:14214-14593 ( 18) CGGGAAAATGAAAAATGTAAA 1 chrXIII:747762-748137 ( 75) AGATGAAAAAGACGAAAGAAA 1 chrXI:313165-313669 ( 12) AGGCTAAAGGAAAAAAATAAA 1 chrIX:370217-370639 ( 4) ACATAAGATCGAAGTAGAAAA 1 chrVII:544394-546119 ( 19) AGAATATGGAAATAAGAAAAG 1 chrVII:736198-736634 ( 44) AAATTATTTAAAAAAACAACA 1 chrII:486687-487024 ( 24) AAAGCGAAGAAGCGAAGAAGA 1 chrVII:316753-317417 ( 18) AAAGTAAATATATGAGAAAAA 1 chrXIII:759698-763194 ( 44) AGATCATTGATAGAAAGAAAA 1 chrXV:259330-259970 ( 36) AGATAGAAAGGAAATATCAAA 1 chrV:18709-19256 ( 78) CAAGATAGGCACATAAGAAGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARADAAAAAAAAAAAARAAAA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 48000 bayes= 10.1779 E= 4.9e-049 115 64 -388 -1295 69 -42 93 -1295 135 -388 -71 -204 7 -230 87 -11 112 -230 -156 -54 135 -1295 -18 -304 135 -1295 -188 -104 73 -30 -30 -82 98 -1295 58 -163 139 -107 -107 -1295 110 -288 21 -182 148 -107 -230 -1295 146 -230 -230 -231 86 -188 51 -146 148 -1295 -1295 -131 132 -1295 -56 -182 7 -230 164 -263 135 -156 -230 -163 167 -1295 -1295 -1295 115 -18 -42 -1295 125 -288 21 -463 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARADAAAAAAAAAAAARAAAA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 79 E= 4.9e-049 0.696203 0.291139 0.012658 0.000000 0.506329 0.139241 0.354430 0.000000 0.797468 0.012658 0.113924 0.075949 0.329114 0.037975 0.341772 0.291139 0.683544 0.037975 0.063291 0.215190 0.797468 0.000000 0.164557 0.037975 0.797468 0.000000 0.050633 0.151899 0.518987 0.151899 0.151899 0.177215 0.620253 0.000000 0.278481 0.101266 0.822785 0.088608 0.088608 0.000000 0.670886 0.025316 0.215190 0.088608 0.873418 0.088608 0.037975 0.000000 0.860759 0.037975 0.037975 0.063291 0.569620 0.050633 0.265823 0.113924 0.873418 0.000000 0.000000 0.126582 0.784810 0.000000 0.126582 0.088608 0.329114 0.037975 0.582278 0.050633 0.797468 0.063291 0.037975 0.101266 1.000000 0.000000 0.000000 0.000000 0.696203 0.164557 0.139241 0.000000 0.746835 0.025316 0.215190 0.012658 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARADAAAAAAAAAAAARAAAA MEME-3 regular expression -------------------------------------------------------------------------------- [AC][AG]A[GAT][AT]AAA[AG]A[AG]AA[AG]AA[GA]AAA[AG] -------------------------------------------------------------------------------- Time 966.87 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:198099-198599 4.30e-02 52_[-3(1.63e-05)]_27 chrVII:1004013-1004411 5.79e-04 52_[-2(1.82e-07)]_21 chrXIV:585407-586581 6.76e-01 100 chrVI:167251-167696 2.76e-07 12_[-2(1.25e-05)]_29_[-1(4.30e-09)]_\ 6 chrXI:74408-74962 7.02e-05 28_[-1(2.32e-08)]_46 chrI:159740-160269 4.15e-01 100 chrIV:1161528-1161906 3.02e-02 100 chrXVI:821630-822238 2.27e-02 15_[-3(4.77e-06)]_64 chrXIII:352108-352494 1.18e-05 27_[-2(3.58e-09)]_46 chrVII:310412-312362 5.39e-01 100 chrVII:122041-122555 3.61e-13 19_[-2(1.56e-09)]_13_[-1(1.63e-11)]_\ 15 chrXI:202844-203318 8.48e-08 6_[-1(1.63e-11)]_68 chrIV:437517-437977 5.32e-06 73_[-2(5.37e-10)] chrIII:4-1430 6.13e-01 100 chrXVI:378676-378992 2.34e-01 100 chrIV:670959-671314 1.47e-01 100 chrXI:321756-322009 3.14e-03 40_[-2(1.39e-06)]_33 chrIX:248655-249411 9.48e-01 100 chrXIV:307048-307364 1.47e-05 64_[-3(1.25e-09)]_15 chrIV:568477-569267 9.40e-04 58_[-2(5.52e-07)]_15 chrXII:201638-202715 4.67e-01 100 chrIX:210511-211211 3.79e-02 76_[+3(1.27e-05)]_3 chrII:167709-169646 4.03e-01 100 chrXI:302697-303250 1.49e-06 66_[-1(5.16e-09)]_8 chrXVI:121166-121565 5.04e-03 25_[-3(2.41e-06)]_54 chrVII:205311-205808 7.15e-05 10_[-2(9.86e-09)]_63 chrXV:619325-624637 4.23e-02 100 chrXI:547822-548189 4.59e-01 100 chrVII:661533-661939 3.63e-04 61_[-2(1.82e-07)]_12 chrXV:759048-759586 6.40e-01 100 chrXII:932103-932495 6.49e-02 69_[+3(2.08e-05)]_10 chrV:77469-79931 2.64e-03 62_[-2(2.63e-06)]_11 chrXVI:576139-576411 6.19e-01 100 chrII:392573-395438 4.19e-01 100 chrIV:488467-489166 1.21e-06 38_[+1(6.26e-10)]_36 chrXV:505025-505476 6.61e-02 100 chrIV:541176-542115 5.77e-01 100 chrXIII:504691-505225 7.31e-01 100 chrVI:153073-153345 7.67e-01 100 chrXII:589019-589267 8.84e-01 100 chrVIII:62542-63006 6.00e-07 29_[-2(1.61e-06)]_12_[-1(8.30e-08)]_\ 6 chrX:390862-390962 7.24e-08 19_[+1(7.00e-07)]_13_[+2(1.77e-08)]_\ 15 chrVII:73681-74194 1.07e-03 50_[-2(1.11e-06)]_23 chrVIII:148963-149279 1.67e-01 100 chrXII:687652-688138 5.01e-12 21_[+1(1.71e-10)]_14_[+2(2.38e-09)]_\ 12 chrXIII:23611-25921 3.38e-01 100 chrXIII:808847-809290 4.07e-01 100 chrXIV:499294-502867 6.94e-01 100 chrVII:227455-228315 8.76e-01 100 chrXVI:770569-771123 7.99e-01 100 chrXII:897703-899670 4.00e-01 100 chrIV:1359204-1361235 3.09e-01 100 chrXV:438418-438995 4.16e-07 48_[-1(8.99e-11)]_26 chrXII:1064034-1065350 3.29e-01 100 chrVII:726433-728341 1.15e-02 100 chrXI:382234-382477 2.36e-01 100 chrX:197171-197271 2.74e-08 18_[+2(7.93e-13)]_55 chrVI:101154-101604 8.12e-06 45_[-2(4.66e-09)]_28 chrXVI:286196-286766 3.60e-01 100 chrV:551049-551561 1.93e-07 37_[+1(2.56e-11)]_37 chrXI:163225-164495 8.63e-01 100 chrXII:673118-674526 2.41e-01 100 chrXI:518896-519327 5.67e-01 100 chrX:612687-612787 5.00e-01 100 chrV:166709-167632 4.95e-03 64_[+3(5.74e-06)]_15 chrII:40625-40885 7.39e-01 100 chrVI:222903-224147 1.07e-01 100 chrXIII:183721-184170 1.12e-13 10_[+1(5.31e-12)]_11_[+2(1.56e-09)]_\ 26 chrXIII:747762-748137 3.34e-12 [+1(1.33e-10)]_12_[+2(5.52e-07)]_9_\ [-3(2.25e-05)]_5 chrII:555773-558503 9.23e-01 100 chrXII:366031-366545 4.07e-01 100 chrVII:794180-794584 5.43e-01 100 chrX:745257-745357 9.82e-01 100 chrII:645000-645437 2.38e-08 36_[-1(1.20e-11)]_38 chrXII:805457-807155 7.68e-01 100 chrIII:11096-11573 9.64e-01 100 chrV:225450-225701 4.18e-04 23_[+3(2.24e-07)]_56 chrXII:231954-234317 5.24e-01 100 chrIV:980746-981250 9.06e-05 33_[+1(2.52e-06)]_14_[+2(5.10e-05)] chrXII:6-281 5.98e-05 36_[+3(8.86e-08)]_43 chrVI:226501-226928 1.79e-13 31_[+1(1.63e-11)]_13_[+2(1.56e-09)]_\ 3 chrXVI:491502-491788 3.36e-03 56_[+3(1.16e-06)]_23 chrV:492150-492562 9.75e-06 53_[+1(2.20e-09)]_21 chrII:486687-487024 4.93e-02 23_[+3(3.85e-05)]_56 chrII:197236-197860 1.93e-07 35_[-1(2.56e-11)]_39 chrXII:214699-215148 2.18e-15 17_[+1(2.56e-11)]_13_[+2(7.03e-12)]_\ 17 chrXVI:404533-405976 7.86e-01 100 chrXII:734702-735427 1.94e-02 11_[+3(4.77e-06)]_68 chrXV:875110-875651 4.80e-01 100 chrVII:878591-879035 1.76e-02 26_[+2(2.67e-05)]_47 chrI:81930-82259 1.15e-01 100 chrX:617758-617858 1.12e-06 21_[-2(1.16e-09)]_52 chrXV:980501-981045 4.85e-08 30_[-1(6.28e-12)]_44 chrVII:667864-668166 8.95e-01 100 chrXV:79753-80101 7.69e-01 100 chrVII:554813-557507 1.37e-02 32_[+3(3.25e-06)]_47 chrXVI:280577-281890 1.69e-01 100 chrXII:370539-371718 6.92e-01 100 chrXVI:819337-819982 6.88e-05 48_[-3(8.69e-09)]_31 chrVIII:206116-206612 7.39e-01 100 chrV:438269-439248 3.42e-06 31_[-1(1.71e-10)]_43 chrII:181364-181612 4.90e-01 100 chrXVI:622332-622842 4.12e-11 10_[+1(2.20e-09)]_32_[+2(3.58e-09)]_\ 5 chrXII:875259-875641 1.29e-09 37_[-1(8.99e-11)]_11_[-3(1.07e-05)]_\ 5 chrXII:198445-199732 9.46e-01 100 chrII:515325-515631 5.38e-01 100 chrVII:882293-884087 4.02e-02 100 chrXVI:928225-928768 3.00e-01 100 chrXII:903381-903914 5.22e-01 100 chrXIV:771705-772407 5.39e-01 100 chrXII:962832-963363 2.65e-01 100 chrIX:68204-69590 8.19e-03 [+3(1.44e-06)]_79 chrIV:386374-387562 5.07e-02 100 chrII:332303-334123 9.49e-01 100 chrV:33808-34219 6.31e-01 100 chrIV:465208-465584 5.15e-02 72_[-3(7.28e-05)]_7 chrXV:436248-436768 1.02e-01 100 chrXII:784146-784556 3.08e-06 51_[-2(9.86e-09)]_22 chrIV:1524336-1525629 5.87e-01 100 chrXV:300862-301459 8.18e-08 54_[-1(6.28e-12)]_20 chrVII:576492-577135 6.49e-01 100 chrXIII:372187-372733 1.41e-06 42_[+1(1.71e-10)]_32 chrVIII:85092-85565 4.63e-12 27_[+1(1.71e-10)]_14_[+2(2.38e-09)]_\ 6 chrXVI:901519-902003 1.68e-01 100 chrV:298158-298646 3.60e-01 100 chrVII:371181-371457 1.16e-01 100 chrXV:976175-978451 1.82e-01 100 chrXIII:549887-553323 6.83e-01 100 chrXV:784622-785062 2.24e-01 100 chrX:414794-414894 9.43e-09 32_[-1(1.63e-11)]_42 chrVII:531443-531800 2.12e-03 37_[-2(1.50e-06)]_36 chrX:354042-354142 9.83e-07 [-2(5.10e-05)]_20_[-1(4.30e-09)]_27 chrXII:426918-427440 1.76e-07 1_[-2(1.50e-06)]_12_[-1(2.50e-08)]_\ 34 chrXII:92329-92895 6.52e-08 54_[-1(6.28e-12)]_20 chrIV:449049-450091 9.77e-01 100 chrXIII:379016-379593 7.62e-06 56_[+1(5.16e-09)]_18 chrXIV:241420-241733 6.96e-01 100 chrIV:1201129-1202101 9.58e-01 100 chrVII:412083-412568 5.03e-12 26_[+1(1.71e-10)]_14_[+2(2.38e-09)]_\ 7 chrXI:322436-322721 5.86e-01 100 chrXI:219568-220107 6.67e-01 100 chrV:207138-207893 7.62e-01 100 chrXI:430478-431646 2.83e-04 34_[+2(3.01e-06)]_39 chrXV:594210-594650 5.72e-05 19_[+2(8.74e-09)]_54 chrX:355146-355246 1.31e-09 27_[-1(1.33e-10)]_17_[-2(1.50e-06)]_\ 3 chrIV:1116824-1117230 3.30e-01 100 chrVII:363916-364450 2.18e-04 7_[-3(1.72e-08)]_23_[+3(1.50e-05)]_\ 28 chrX:424296-424396 3.79e-06 24_[+2(7.73e-09)]_49 chrX:703254-703354 1.24e-02 67_[-3(1.50e-05)]_12 chrVII:857231-857667 9.51e-05 66_[+2(9.86e-09)]_7 chrXIII:731859-733480 3.28e-01 100 chrVII:823282-823693 1.61e-05 43_[-2(2.38e-09)]_30 chrXIII:296742-298941 7.78e-01 100 chrII:283865-284191 1.51e-02 100 chrVIII:132809-133677 6.08e-01 100 chrV:214752-215123 5.84e-01 100 chrVII:479161-482988 5.30e-01 100 chrVIII:475472-475902 4.31e-02 68_[-1(6.23e-05)]_6 chrIV:83302-83813 2.69e-07 39_[-2(7.37e-10)]_34 chrXII:348109-348709 3.53e-01 100 chrIV:453497-454163 1.92e-01 100 chrXIII:145805-146263 9.05e-04 26_[-3(5.91e-07)]_53 chrV:569386-570022 7.52e-01 100 chrVII:147889-149490 5.09e-01 100 chrXII:920849-921167 3.33e-02 10_[-1(5.34e-05)]_64 chrXII:234573-235001 9.34e-01 100 chrXII:855768-857606 2.23e-01 100 chrVIII:48136-48546 3.09e-01 100 chrX:415806-415906 1.17e-03 24_[+2(2.67e-05)]_49 chrXIV:776654-777197 6.07e-01 100 chrX:73379-73479 3.92e-02 38_[-1(5.17e-05)]_36 chrIV:308020-310177 6.12e-01 100 chrII:135938-136368 3.89e-02 47_[+1(9.74e-05)]_27 chrII:478952-479421 5.01e-01 100 chrVIII:34385-36343 2.86e-03 61_[+2(1.99e-06)]_12 chrXIV:444477-444773 1.39e-04 78_[-3(4.33e-08)]_1 chrIV:1273842-1274164 2.96e-01 100 chrXIV:302653-303700 4.26e-01 100 chrX:227738-227838 5.87e-01 100 chrIX:177682-178012 1.57e-02 16_[+2(9.64e-05)]_57 chrIV:599487-600164 9.07e-03 68_[+1(6.63e-06)]_6 chrXVI:842769-843056 2.48e-01 100 chrV:423101-425304 2.23e-03 61_[+3(1.17e-05)]_18 chrVIII:74924-76255 3.73e-01 100 chrIV:358096-358407 3.15e-01 100 chrXV:571730-572167 3.71e-03 58_[-2(1.50e-06)]_15 chrIV:1352292-1352733 3.67e-13 11_[+1(1.63e-11)]_13_[+2(1.56e-09)]_\ 23 chrIX:300030-300509 3.67e-13 16_[+1(1.63e-11)]_13_[+2(1.56e-09)]_\ 18 chrX:233702-233802 5.20e-05 37_[-2(3.92e-06)]_36 chrXII:448323-449023 3.63e-12 34_[+1(1.33e-10)]_12_[+2(3.81e-08)]_\ 1 chrXII:368660-370324 1.74e-01 67_[+3(9.51e-05)]_12 chrVII:777871-778357 1.92e-01 100 chrXII:687175-687438 9.93e-02 10_[-3(7.28e-05)]_13_[-3(7.28e-05)]_\ 35 chrIV:410202-410720 3.68e-07 6_[-1(1.20e-09)]_68 chrXVI:75400-76709 2.77e-01 100 chrVII:930799-931213 5.22e-14 4_[+1(5.31e-12)]_11_[+2(7.37e-10)]_\ 32 chrXIV:631477-632132 4.77e-01 100 chrX:422627-422727 2.49e-05 35_[-2(1.77e-08)]_38 chrVIII:115413-116428 3.63e-03 52_[-3(4.67e-07)]_27 chrV:18709-19256 3.08e-02 77_[-3(7.28e-05)]_2 chrXIV:725787-726388 7.13e-01 100 chrXIII:631796-634854 1.33e-04 64_[+3(3.19e-08)]_15 chrXII:1012034-1012309 5.69e-03 32_[+3(6.80e-05)]_11_[+3(7.43e-07)]_\ 15 chrXIV:374715-375111 1.96e-11 4_[-2(1.56e-09)]_31_[-1(2.20e-09)]_\ 12 chrVII:422902-423590 4.53e-01 100 chrIII:82376-82775 8.53e-01 100 chrV:469267-469704 5.01e-12 20_[-2(2.38e-09)]_14_[-1(1.71e-10)]_\ 13 chrX:139099-139199 9.67e-01 100 chrIV:1305428-1305911 6.11e-09 9_[-2(5.37e-10)]_23_[-1(1.81e-06)]_\ 15 chrIX:394752-395078 1.30e-03 68_[+3(6.63e-07)]_11 chrXVI:520154-520808 2.90e-02 49_[+2(5.87e-05)]_24 chrXII:780714-781876 3.28e-04 37_[-3(3.94e-06)]_42 chrXVI:406202-407817 8.61e-01 100 chrXII:230816-231548 8.91e-01 100 chrXV:216258-216672 5.53e-01 100 chrXII:793727-797499 8.34e-01 100 chrV:354685-355386 5.91e-01 100 chrXVI:329089-329561 7.49e-01 100 chrV:288150-288760 3.99e-04 45_[+1(6.88e-06)]_29 chrXV:167821-168509 1.34e-01 100 chrXIII:419962-420867 8.15e-01 100 chrX:663589-663689 4.42e-01 100 chrXVI:639295-639629 2.91e-01 100 chrIV:229476-230746 3.55e-01 100 chrV:303983-306930 8.02e-01 100 chrXIII:627822-628249 4.52e-01 100 chrVI:137259-137916 6.48e-01 100 chrXII:628174-628630 8.30e-05 29_[-2(9.86e-09)]_44 chrII:405681-406252 5.57e-03 42_[-2(1.50e-06)]_31 chrIV:433996-434551 3.08e-05 48_[+1(2.95e-09)]_26 chrVII:364886-366720 4.91e-01 100 chrXV:854010-854422 2.18e-15 28_[+1(2.56e-11)]_13_[+2(7.03e-12)]_\ 6 chrVII:438601-439924 6.32e-01 100 chrXV:725068-725703 7.78e-01 100 chrIV:1075297-1075746 2.04e-09 8_[+1(1.02e-10)]_13_[+2(4.47e-06)]_\ 26 chrII:9372-9880 6.07e-08 5_[-2(7.73e-09)]_24_[-1(2.13e-06)]_\ 18 chrXIII:122895-124723 5.35e-01 100 chrVII:316753-317417 1.00e-01 17_[-3(4.14e-05)]_62 chrXIII:290438-291155 7.76e-02 53_[-2(3.81e-05)]_20 chrXIII:768181-768630 1.62e-14 21_[+1(1.20e-09)]_13_[+2(7.93e-13)]_\ 13 chrXI:313165-313669 6.21e-06 11_[+3(2.85e-05)]_9_[+1(8.30e-08)]_\ 33 chrXI:458375-459005 5.36e-02 32_[-3(1.63e-05)]_47 chrX:374202-374302 1.92e-01 100 chrIII:287808-288309 1.57e-01 100 chrXV:340125-340610 3.70e-03 28_[+2(3.92e-06)]_45 chrVII:110361-110917 1.35e-04 43_[+1(8.30e-08)]_31 chrXVI:768965-769460 5.48e-08 52_[+1(8.99e-11)]_22 chrV:61031-62174 8.76e-01 100 chrIV:579045-581064 5.59e-01 100 chrX:523872-523972 5.45e-06 22_[+2(5.37e-10)]_51 chrXI:158160-159612 1.07e-01 68_[+3(4.14e-05)]_11 chrIV:1245687-1246133 9.25e-01 100 chrV:123450-123736 4.22e-01 100 chrIII:137607-139437 3.72e-01 100 chrIV:116010-118231 7.40e-01 100 chrVIII:290643-293052 4.94e-01 100 chrXVI:731602-732290 9.23e-01 100 chrV:434384-434762 5.28e-07 25_[+1(8.30e-08)]_12_[+2(2.29e-06)]_\ 10 chrXI:282603-284973 4.34e-01 100 chrXII:950913-953687 6.50e-01 100 chrXV:391596-391935 7.64e-01 100 chrV:66857-69359 5.81e-01 100 chrXV:1003921-1004979 4.39e-04 [-3(5.80e-08)]_55_[-3(4.67e-07)]_3 chrXV:1027787-1029298 7.62e-01 100 chrIV:491469-492655 3.23e-02 100 chrIV:667745-668227 4.04e-03 47_[+3(2.41e-06)]_32 chrIV:411227-411634 9.14e-01 100 chrV:441816-442623 9.00e-01 100 chrV:282133-283687 1.53e-01 100 chrXVI:689360-689981 9.05e-01 100 chrVI:191292-191824 5.25e-03 12_[+1(4.42e-05)]_62 chrV:135161-135694 1.79e-07 55_[+1(1.63e-11)]_19 chrXIII:224086-224384 7.38e-01 100 chrVIII:277651-278183 1.79e-01 100 chrIII:107135-107839 2.65e-02 15_[+3(7.54e-06)]_64 chrVII:440294-443732 9.98e-01 100 chrVII:544394-546119 7.05e-02 18_[+3(3.31e-05)]_35_[-3(4.14e-05)]_\ 5 chrIII:127541-127940 4.55e-09 24_[-2(4.70e-08)]_14_[-1(2.32e-08)]_\ 9 chrXIII:253286-253573 3.91e-02 1_[+3(1.92e-05)]_78 chrXI:379472-379924 5.02e-12 30_[-2(2.38e-09)]_14_[-1(1.71e-10)]_\ 3 chrXIV:61941-64583 8.59e-01 100 chrV:176898-177406 8.74e-08 34_[-1(1.20e-11)]_40 chrXII:406953-407329 7.49e-01 100 chrIX:254243-254543 6.98e-01 100 chrXII:498488-499722 3.87e-01 100 chrVII:496754-497673 4.98e-01 100 chrVIII:505842-506185 1.68e-01 75_[+3(8.91e-05)]_4 chrXI:108492-109061 1.47e-02 77_[-3(3.94e-06)]_2 chrVI:157709-158252 2.18e-05 51_[+2(3.58e-09)]_22 chrXII:281993-283902 7.49e-01 100 chrVI:204794-205200 2.83e-09 23_[+2(3.27e-12)]_50 chrXIV:413541-416536 8.39e-07 61_[-3(1.24e-10)]_18 chrX:651145-651245 8.99e-01 100 chrII:165088-165555 5.66e-01 100 chrIV:1355734-1356057 7.37e-01 100 chrXII:818485-820418 7.18e-02 100 chrXII:636730-640190 3.57e-01 100 chrIV:1256823-1257285 1.00e-10 11_[+1(1.94e-10)]_12_[+2(5.20e-08)]_\ 24 chrXV:407643-408200 3.35e-01 100 chrIV:489643-491262 5.77e-01 100 chrV:487090-487601 1.37e-08 43_[+1(1.20e-11)]_31 chrXI:162285-162763 6.28e-10 20_[+1(1.33e-10)]_12_[+2(5.52e-07)]_\ 15 chrXII:921415-922564 7.35e-01 100 chrVIII:562289-562577 1.74e-02 2_[-3(9.83e-06)]_77 chrXII:592363-593163 4.54e-01 100 chrXI:67795-68528 8.48e-01 100 chrVII:574629-574989 6.80e-01 100 chrIV:221051-222348 5.52e-01 100 chrIV:1401276-1403410 6.75e-01 100 chrX:517632-517732 5.27e-02 100 chrXIII:161907-164352 2.70e-01 100 chrVII:845339-845917 4.56e-06 69_[-2(7.37e-10)]_4 chrXVI:188515-188973 4.45e-06 9_[+3(7.28e-09)]_70 chrXIII:91656-92112 5.85e-01 100 chrXIV:495227-495585 7.97e-01 100 chrXIII:650762-652981 5.40e-02 100 chrXI:513201-513614 2.22e-04 20_[+2(1.50e-06)]_53 chrX:538365-538465 8.11e-12 20_[-1(1.94e-10)]_15_[-3(3.62e-09)]_\ 18 chrXI:326073-327606 6.08e-01 100 chrXIV:104596-105117 2.22e-05 37_[-1(2.95e-09)]_37 chrXIII:131494-132118 1.53e-01 100 chrIX:98210-100016 9.72e-01 100 chrXI:626298-626506 5.93e-01 100 chrVI:82550-84453 8.66e-01 100 chrIII:236412-236732 3.54e-01 100 chrVIII:498791-499015 2.23e-01 100 chrVII:730956-731419 5.05e-06 39_[-1(2.32e-08)]_35 chrXV:925177-925444 2.70e-01 100 chrXV:159275-160787 3.26e-01 100 chrXIV:442813-444319 8.77e-01 100 chrXIV:576561-577461 1.20e-02 53_[-2(8.83e-05)]_20 chrVII:483315-483757 7.66e-01 100 chrXI:490741-491356 3.09e-08 8_[-1(2.20e-09)]_27_[-3(2.18e-06)]_\ 18 chrIX:257386-258162 1.90e-01 100 chrXV:464247-464850 6.91e-10 19_[-1(6.28e-12)]_9_[-3(1.50e-05)]_\ 25 chrIX:137993-139121 9.99e-01 100 chrIV:946156-946620 5.37e-05 28_[-1(4.30e-09)]_46 chrXV:832303-832821 2.54e-01 100 chrV:396209-397942 5.35e-01 100 chrXIV:546952-547403 1.94e-08 35_[-1(6.28e-12)]_39 chrIII:113817-114798 1.10e-01 100 chrVII:736198-736634 3.37e-08 11_[-1(1.33e-10)]_6_[-3(3.85e-05)]_\ 36 chrII:326583-327165 1.65e-04 15_[+2(7.59e-07)]_58 chrXIII:225356-227042 1.34e-01 100 chrIV:992616-993060 1.08e-06 42_[-2(7.37e-10)]_31 chrVI:210423-210894 2.77e-07 18_[+1(4.30e-09)]_29_[+2(1.25e-05)] chrXVI:699921-700714 9.86e-02 60_[+3(4.14e-05)]_19 chrVII:779414-779876 1.60e-11 19_[-2(2.22e-08)]_12_[-1(6.88e-11)]_\ 16 chrII:88905-89932 9.74e-01 100 chrII:63198-63492 6.21e-02 68_[+3(3.31e-05)]_11 chrXV:842364-842998 2.85e-01 100 chrX:54049-54149 7.32e-01 100 chrXII:374210-374653 2.68e-05 12_[-1(2.20e-09)]_62 chrVII:592593-592937 3.03e-01 100 chrII:122014-122383 6.67e-01 100 chrIV:1449912-1451388 2.09e-01 100 chrXV:274486-274984 3.72e-02 54_[-1(4.42e-05)]_20 chrVII:648071-648494 8.31e-01 100 chrXVI:744039-744630 2.45e-04 37_[-1(1.14e-07)]_37 chrXV:113594-114292 1.00e-01 100 chrV:430991-431561 4.43e-02 100 chrIX:2-222 7.56e-03 69_[+3(5.23e-06)]_10 chrXV:253817-254112 8.07e-01 100 chrIII:118252-118635 8.40e-01 100 chrXII:459655-460680 2.71e-02 66_[+2(1.85e-05)]_7 chrV:270395-270669 9.80e-01 100 chrXVI:810445-810875 3.77e-04 64_[-2(7.77e-08)]_9 chrXVI:209971-210520 7.16e-09 4_[+1(1.20e-11)]_12_[+2(8.44e-05)]_\ 31 chrIV:1461508-1462275 4.26e-01 100 chrXVI:55848-56509 4.41e-05 48_[+1(5.16e-09)]_26 chrVII:702863-703262 2.52e-01 100 chrVII:774128-774617 1.51e-14 25_[-2(7.93e-13)]_13_[-1(1.20e-09)]_\ 9 chrXI:83963-84446 3.20e-06 52_[-2(7.73e-09)]_21 chrX:636805-636905 1.38e-04 59_[+3(1.45e-08)]_20 chrII:226878-227778 8.42e-01 100 chrXIV:715953-717059 1.59e-02 61_[-3(9.83e-06)]_18 chrII:63-274 2.78e-01 100 chrV:93873-94354 3.47e-01 100 chrIV:1233717-1234287 8.86e-01 100 chrV:435496-436016 8.65e-08 53_[+1(1.63e-11)]_21 chrXII:1017692-1019380 1.92e-01 100 chrI:141664-143680 5.83e-01 100 chrX:391823-391923 4.79e-01 100 chrII:504430-504767 1.46e-01 100 chrVIII:103864-106151 7.89e-01 100 chrIII:123370-123865 2.66e-16 17_[+1(5.28e-17)]_12_[+2(2.37e-07)]_\ 18 chrXV:1025745-1026084 5.93e-01 100 chrXII:424129-424440 3.38e-01 100 chrVII:254138-254728 5.64e-01 100 chrVIII:410956-411967 3.28e-01 100 chrXII:5484-5981 2.08e-01 100 chrXIII:287522-287707 2.46e-02 100 chrIII:28517-31616 1.39e-01 100 chrXVI:775644-776099 9.03e-01 100 chrX:607865-607965 4.00e-01 100 chrX:542778-542878 7.87e-01 100 chrIX:316137-318280 4.08e-01 100 chrV:99828-100334 9.52e-01 100 chrII:680321-682185 1.61e-01 100 chrII:477099-477785 1.03e-01 100 chrVIII:134050-134560 1.01e-04 64_[-2(3.81e-08)]_9 chrVII:319602-320137 8.29e-02 100 chrXV:663532-664212 1.27e-05 37_[+2(2.38e-09)]_36 chrXV:353896-354318 5.15e-05 30_[+2(4.09e-09)]_43 chrXIII:923204-924377 1.41e-03 31_[+2(1.20e-06)]_42 chrXV:24513-24961 6.56e-01 100 chrX:348823-348923 7.88e-01 100 chrX:26193-26293 1.30e-01 100 chrXIV:560507-561613 2.72e-02 100 chrIV:519559-520107 4.31e-04 9_[-1(2.13e-06)]_65 chrXI:258534-259024 6.66e-02 100 chrVIII:555893-557185 4.02e-01 100 chrIV:1016657-1017503 9.19e-02 100 chrIII:177076-178789 2.49e-01 100 chrXI:578774-579298 7.72e-08 40_[-1(8.99e-11)]_34 chrXIII:837712-838256 8.69e-07 1_[-2(5.10e-05)]_20_[-1(4.30e-09)]_\ 26 chrVIII:451272-453055 5.32e-01 100 chrVII:334562-334860 9.49e-03 39_[-3(1.96e-06)]_40 chrIII:142101-142973 7.96e-02 100 chrVIII:466788-467255 1.05e-08 17_[-2(1.82e-07)]_12_[-1(3.90e-08)]_\ 18 chrVI:95493-95886 1.40e-01 100 chrX:204453-204553 4.70e-01 100 chrXIII:302634-303154 5.83e-01 100 chrIV:1488990-1489938 3.82e-01 100 chrV:85131-86870 4.60e-01 100 chrV:269178-270202 2.52e-01 100 chrX:58712-58812 8.05e-07 50_[+3(1.94e-09)]_29 chrXIII:572751-573146 1.27e-04 31_[+2(1.77e-08)]_42 chrV:117616-118285 6.08e-01 100 chrVII:976761-977226 1.97e-01 100 chrIV:321665-321942 5.91e-01 100 chrII:565356-565663 1.09e-01 100 chrXVI:259336-259621 1.31e-02 [-3(2.66e-06)]_79 chrXVI:302622-304322 5.96e-01 100 chrVII:533499-535205 3.66e-01 100 chrIII:227767-228346 1.49e-02 2_[-1(6.88e-06)]_72 chrIV:1345328-1345746 3.93e-01 100 chrXIV:96031-96578 8.37e-05 32_[+2(1.25e-08)]_1_[-2(2.54e-05)]_\ 13 chrXI:46568-47005 4.34e-10 6_[+1(5.00e-10)]_12_[+2(2.59e-07)]_\ 29 chrXVI:880073-880557 2.40e-11 6_[+3(3.68e-07)]_11_[+1(2.56e-11)]_\ 36 chrXIII:659215-659584 8.89e-03 37_[-3(4.77e-06)]_42 chrXI:100644-104580 5.21e-01 100 chrV:406556-409617 5.92e-01 100 chrVI:199225-199714 8.99e-01 100 chrXII:84173-84423 2.57e-01 100 chrXII:48721-49119 4.70e-06 1_[+3(2.40e-10)]_78 chrIII:168091-168619 2.56e-11 3_[+1(1.33e-10)]_12_[+2(2.22e-08)]_\ 32 chrIV:1300225-1301332 1.55e-01 100 chrVIII:237750-238122 2.11e-06 27_[+2(3.58e-09)]_46 chrXIV:88538-90049 1.02e-07 75_[-3(5.44e-12)]_4 chrV:250121-250773 4.09e-01 100 chrII:415534-415866 1.59e-01 100 chrVI:63953-65372 9.91e-01 100 chrXII:833601-833943 2.01e-02 15_[-3(3.58e-06)]_64 chrIV:340144-341663 9.12e-01 100 chrVIII:388676-389195 5.77e-08 15_[+1(6.28e-12)]_59 chrI:6-1069 1.21e-02 54_[-2(4.47e-06)]_19 chrXIV:237778-238059 2.16e-01 100 chrIII:315610-316618 4.51e-01 100 chrVII:400806-401755 6.53e-04 57_[-3(1.73e-07)]_22 chrIV:884192-884635 5.72e-03 1_[-1(3.46e-06)]_73 chrXIV:567900-568488 5.77e-08 39_[-1(6.28e-12)]_35 chrXII:605117-605627 5.33e-01 100 chrXII:168777-169113 9.12e-02 100 chrIV:118435-118857 6.80e-01 100 chrVII:939025-939695 8.06e-01 100 chrXII:731916-732261 6.07e-06 50_[-2(1.16e-09)]_23 chrII:347402-347895 1.05e-07 3_[-2(1.41e-08)]_24_[-1(2.13e-06)]_\ 20 chrXIII:168614-169050 2.77e-07 11_[-2(1.25e-05)]_29_[-1(4.30e-09)]_\ 7 chrIX:183281-183710 4.69e-14 2_[+1(2.56e-11)]_14_[+2(1.13e-10)]_\ 31 chrII:36186-36595 2.85e-05 56_[-2(3.58e-09)]_17 chrXI:1-1055 4.78e-03 69_[-2(3.01e-06)]_4 chrII:604131-607134 9.96e-01 100 chrXI:554543-555022 6.00e-01 100 chrXV:968087-968415 3.67e-01 100 chrXII:373106-373485 6.52e-04 69_[+3(5.91e-07)]_10 chrIX:336097-336639 1.86e-04 38_[+1(2.50e-08)]_36 chrII:300989-301655 6.37e-01 100 chrV:491108-491450 3.05e-01 100 chrXIII:195912-196411 4.47e-06 33_[+2(2.38e-09)]_40 chrXVI:701839-702323 6.92e-01 100 chrIV:644988-645375 3.82e-11 29_[+1(1.33e-10)]_12_[+2(3.81e-08)]_\ 6 chrXIII:759698-763194 2.01e-02 43_[+3(5.15e-05)]_36 chrXII:1028230-1028545 1.10e-02 8_[-3(4.77e-06)]_71 chrVII:18-1239 7.53e-01 100 chrI:166051-166571 2.18e-15 4_[-2(7.03e-12)]_13_[-1(2.56e-11)]_\ 30 chrV:130833-131439 1.12e-10 3_[+1(2.47e-10)]_12_[+2(5.76e-08)]_\ 32 chrIV:1236396-1238502 4.56e-01 100 chrIX:323950-324577 3.99e-01 100 chrII:254706-256025 4.24e-02 100 chrII:297705-298016 5.79e-01 100 chrV:443043-443494 4.55e-07 31_[+2(1.13e-10)]_42 chrXIII:696456-696864 2.78e-03 48_[+3(2.88e-07)]_31 chrXVI:559975-560494 1.08e-05 21_[+1(2.20e-09)]_53 chrII:159807-160052 5.90e-01 100 chrIV:995498-996084 6.25e-01 100 chrVIII:381172-383434 8.61e-01 100 chrXV:409535-410028 6.88e-01 100 chrV:362173-362474 7.47e-01 100 chrXVI:572025-572562 1.06e-13 24_[-2(1.56e-09)]_11_[-1(5.31e-12)]_\ 12 chrXVI:696904-697226 2.43e-01 100 chrIV:818981-819583 3.38e-01 100 chrXII:651031-651259 8.50e-01 100 chrVIII:175080-175402 4.72e-01 100 chrXII:614444-614765 2.08e-01 100 chrVIII:384101-386961 3.95e-02 59_[-3(1.63e-05)]_20 chrIV:538871-539244 4.50e-01 100 chrIX:370217-370639 1.20e-03 3_[+3(3.31e-05)]_13_[-2(3.81e-05)]_\ 36 chrIII:246636-247001 7.24e-01 100 chrX:541328-541428 1.68e-04 35_[-1(2.50e-08)]_39 chrVII:255190-255648 8.96e-01 100 chrXV:277551-277871 4.47e-01 100 chrXIV:457293-457563 3.23e-01 100 chrVIII:145918-146446 9.23e-01 100 chrXI:617710-619218 9.50e-01 100 chrXV:4-1024 6.80e-01 100 chrVII:541611-542176 1.26e-12 5_[-2(3.81e-05)]_12_[-1(1.20e-11)]_\ 8_[-3(1.29e-06)]_1 chrXIII:861172-861531 3.31e-02 76_[-3(1.07e-05)]_3 chrVII:405293-405775 2.02e-06 23_[-1(1.33e-10)]_51 chrIII:78406-78922 1.66e-01 100 chrV:6168-6679 7.16e-01 100 chrX:378129-378229 6.45e-06 60_[-2(2.38e-09)]_13 chrXIII:463306-463886 5.41e-07 6_[-2(4.76e-06)]_12_[-1(2.50e-08)]_\ 29 chrXIII:5343-5776 9.18e-01 100 chrIII:14136-17369 4.67e-01 100 chrII:642860-643265 7.16e-07 2_[+1(1.07e-07)]_12_[+2(1.50e-06)]_\ 33 chrXIII:286590-287067 1.64e-02 68_[-3(1.50e-05)]_11 chrXIV:6515-7454 4.43e-01 100 chrVII:287043-287763 1.49e-06 4_[+1(5.16e-09)]_70 chrXIII:480355-480896 7.75e-08 53_[+1(1.63e-11)]_21 chrX:123453-123553 5.81e-01 100 chrIV:281829-282359 5.56e-01 100 chrXIII:501590-502151 2.41e-01 100 chrVIII:222609-222862 6.76e-04 6_[-3(7.79e-05)]_20_[-3(7.70e-08)]_\ 32 chrVII:609285-610076 5.66e-01 100 chrXV:109602-111267 2.06e-02 100 chrXI:140753-142213 2.93e-01 100 chrXIII:586330-586906 3.25e-01 100 chrVI:269498-270158 1.72e-01 100 chrVII:561271-561946 9.91e-01 100 chrVII:289345-289700 2.06e-01 100 chrXV:228099-228616 7.60e-09 22_[-2(4.70e-08)]_14_[-1(2.32e-08)]_\ 11 chrX:598416-598516 5.81e-01 100 chrX:531580-531680 2.37e-17 5_[-2(7.37e-10)]_11_[-1(5.31e-12)]_\ 8_[-3(1.60e-06)]_2 chrXII:241570-241993 3.91e-01 100 chrXIV:449377-449692 5.10e-01 100 chrIV:129909-130987 5.86e-03 50_[-3(2.94e-06)]_29 chrVII:14214-14593 6.99e-02 17_[+3(2.25e-05)]_62 chrXII:975787-976249 3.35e-09 22_[+1(2.32e-08)]_14_[+2(4.70e-08)]_\ 11 chrVII:648744-649419 4.07e-03 50_[+3(2.66e-06)]_8_[+3(2.08e-05)] chrII:59511-61265 9.60e-01 100 chrV:321892-323423 3.91e-01 100 chrIX:325538-326083 3.13e-05 26_[-1(2.95e-09)]_48 chrVII:876186-876732 3.97e-08 23_[-1(1.63e-11)]_51 chrXIII:540198-540707 1.74e-03 55_[-3(4.15e-07)]_24 chrIV:835791-836248 6.01e-01 100 chrVIII:401055-401363 7.33e-02 62_[-3(2.25e-05)]_17 chrIII:293706-295846 8.66e-01 100 chrVII:277053-278722 7.12e-01 100 chrXII:534466-534808 3.98e-01 100 chrII:71108-71404 3.51e-01 100 chrXIV:575151-576200 6.28e-01 100 chrVI:180694-181313 5.50e-14 28_[+1(5.31e-12)]_11_[+2(7.37e-10)]_\ 8 chrXII:657702-658726 4.11e-05 1_[-3(1.97e-07)]_78 chrII:350559-351120 6.05e-04 36_[-2(2.83e-07)]_37 chrVII:687567-687905 3.64e-03 44_[-3(6.63e-07)]_35 chrXII:1051888-1052361 2.60e-14 4_[+1(2.56e-11)]_14_[+2(1.13e-10)]_\ 29 chrV:42202-42377 3.26e-01 100 chrVII:328388-329211 4.35e-01 100 chrII:87933-88596 4.84e-02 48_[-3(7.28e-05)]_31 chrI:180937-181480 7.26e-01 100 chrXV:671073-671458 1.83e-01 100 chrIV:322203-323631 1.63e-04 9_[+3(1.97e-07)]_70 chrXII:11040-11993 7.08e-02 66_[+2(4.00e-05)]_7 chrVIII:125894-126298 5.11e-01 100 chrIV:76857-77131 3.19e-01 100 chrII:44993-45322 3.50e-03 13_[+3(1.60e-06)]_66 chrIV:520598-521413 1.30e-10 15_[-2(1.26e-07)]_12_[-1(1.33e-10)]_\ 20 chrXIII:754438-754916 9.21e-01 100 chrXII:728031-728726 3.04e-01 100 chrXIII:306120-307291 1.26e-01 100 chrIII:279784-280330 5.16e-01 100 chrXI:307027-307421 1.12e-02 75_[+3(2.18e-06)]_4 chrXII:837589-839402 8.15e-01 100 chrIII:95967-96291 8.43e-01 100 chrVI:162039-162447 5.17e-14 33_[-2(7.37e-10)]_11_[-1(5.31e-12)]_\ 3 chrVIII:358279-358793 2.18e-05 57_[+2(3.58e-09)]_16 chrXV:161098-161386 3.12e-01 100 chrIII:292687-293034 7.50e-01 100 chrXVI:435565-436173 1.84e-01 100 chrXV:901429-901765 9.13e-01 100 chrXV:796836-797715 8.64e-01 100 chrVII:345845-346679 1.94e-01 100 chrXII:95504-95933 2.65e-01 100 chrII:266165-266655 1.14e-10 16_[-2(4.09e-09)]_13_[-1(2.95e-09)]_\ 18 chrXV:779704-781012 9.70e-02 100 chrVII:828468-828989 3.20e-06 52_[+1(1.33e-10)]_22 chrXV:259330-259970 7.80e-02 35_[-3(6.35e-05)]_44 chrXV:281971-282658 7.83e-01 100 chrIX:438749-439885 1.10e-02 33_[+2(6.93e-06)]_40 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************