******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--GAL11/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrII:350557-351133 1.0000 100 chrVIII:384083-385915 1.0000 100 chrXV:40040-40666 1.0000 100 chrVII:255181-255667 1.0000 100 chrXI:333456-334960 1.0000 100 chrI:151597-151879 1.0000 100 chrIV:1359139-1360832 1.0000 100 chrXVI:821606-822451 1.0000 100 chrXIII:586395-586904 1.0000 100 chrVII:531427-531792 1.0000 100 chrVII:412101-412584 1.0000 100 chrXI:517237-517516 1.0000 100 chrIV:579002-580748 1.0000 100 chrIII:120932-122801 1.0000 100 chrXVI:435606-436185 1.0000 100 chrIV:1012612-1013947 1.0000 100 chrXI:665688-666796 1.0000 100 chrIX:394724-395045 1.0000 100 chrXIV:506959-507697 1.0000 100 chrIV:914331-916212 1.0000 100 chrXII:447807-447995 1.0000 100 chrIX:386570-387013 1.0000 100 chrII:266169-266698 1.0000 100 chrXI:558674-559457 1.0000 100 chrXVI:210036-210501 1.0000 100 chrVII:437089-439911 1.0000 100 chrXV:779664-780989 1.0000 100 chrXII:97109-97887 1.0000 100 chrVII:882379-884781 1.0000 100 chrXV:876783-878063 1.0000 100 chrXIII:123264-124715 1.0000 100 chrV:224646-224974 1.0000 100 chrXVI:641164-641814 1.0000 100 chrII:504462-504717 1.0000 100 chrIV:667754-668251 1.0000 100 chrXV:677955-679204 1.0000 100 chrIV:884154-884733 1.0000 100 chrXIII:747762-748149 1.0000 100 chrVII:185365-186071 1.0000 100 chrXII:734703-734999 1.0000 100 chrVIII:401040-401338 1.0000 100 chrX:690575-690675 1.0000 100 chrVII:371134-371528 1.0000 100 chrVIII:556048-557214 1.0000 100 chrXII:875247-875617 1.0000 100 chrXIII:225287-226675 1.0000 100 chrXIV:88882-90097 1.0000 100 chrXIV:632377-632879 1.0000 100 chrVII:442284-443927 1.0000 100 chrXVI:785576-787078 1.0000 100 chrXIII:5303-5798 1.0000 100 chrIX:98552-100054 1.0000 100 chrXV:619076-623365 1.0000 100 chrXIII:222991-224497 1.0000 100 chrVII:959293-959674 1.0000 100 chrXII:10994-11994 1.0000 100 chrX:517649-517749 1.0000 100 chrVII:115247-115784 1.0000 100 chrXVI:338679-339137 1.0000 100 chrVI:224716-225411 1.0000 100 chrXI:513178-513635 1.0000 100 chrXII:837598-839500 1.0000 100 chrXII:92273-92882 1.0000 100 chrXI:163243-165467 1.0000 100 chrV:354692-355380 1.0000 100 chrII:87843-88595 1.0000 100 chrVII:319599-320141 1.0000 100 chrXIII:320960-321322 1.0000 100 chrXIV:23430-26548 1.0000 100 chrII:812996-813180 1.0000 100 chrXII:592337-593195 1.0000 100 chrVIII:115944-116410 1.0000 100 chrXI:302691-303211 1.0000 100 chrXII:5449-5944 1.0000 100 chrXII:1012092-1012404 1.0000 100 chrII:44937-45352 1.0000 100 chrV:423077-424329 1.0000 100 chrXII:460206-460675 1.0000 100 chrIV:1175590-1176054 1.0000 100 chrXII:231912-234900 1.0000 100 chrVII:328392-329000 1.0000 100 chrXVI:560039-560491 1.0000 100 chrVI:220995-222069 1.0000 100 chrXIV:631611-632131 1.0000 100 chrVII:877753-879075 1.0000 100 chrXII:448453-449006 1.0000 100 chrII:60248-61286 1.0000 100 chrXII:939864-941303 1.0000 100 chrXV:978497-979334 1.0000 100 chrVIII:147870-149302 1.0000 100 chrVII:227487-228757 1.0000 100 chrXI:202823-203303 1.0000 100 chrXV:1070798-1071221 1.0000 100 chrIV:322173-323634 1.0000 100 chrXV:226440-226902 1.0000 100 chrVII:787365-788793 1.0000 100 chrXVI:302635-304245 1.0000 100 chrXII:625180-625840 1.0000 100 chrXVI:812841-813592 1.0000 100 chrVIII:562265-562573 1.0000 100 chrVI:157710-158248 1.0000 100 chrXII:95535-95948 1.0000 100 chrXVI:642265-643304 1.0000 100 chrXII:1064024-1065373 1.0000 100 chrXII:424164-424470 1.0000 100 chrXVI:775631-776083 1.0000 100 chrVIII:175059-175385 1.0000 100 chrXVI:880164-880576 1.0000 100 chrIII:294985-295842 1.0000 100 chrXV:109518-111256 1.0000 100 chrXIII:131489-132112 1.0000 100 chrIX:248585-249460 1.0000 100 chrVI:162024-162487 1.0000 100 chrVII:148192-149541 1.0000 100 chrV:135138-135702 1.0000 100 chrXVI:927752-928421 1.0000 100 chrXV:571694-572155 1.0000 100 chrXII:962820-963353 1.0000 100 chrIX:197358-197814 1.0000 100 chrXV:409590-410259 1.0000 100 chrVII:823274-823712 1.0000 100 chrXIII:625873-626988 1.0000 100 chrVIII:410766-411905 1.0000 100 chrIV:599548-600437 1.0000 100 chrV:461415-462260 1.0000 100 chrVII:598824-601436 1.0000 100 chrXV:1027786-1029165 1.0000 100 chrXIII:753009-755016 1.0000 100 chrXV:903747-904723 1.0000 100 chrX:705178-705278 1.0000 100 chrVII:738884-739423 1.0000 100 chrX:542773-542873 1.0000 100 chrXII:656725-657186 1.0000 100 chrXII:348070-348730 1.0000 100 chrII:680416-682195 1.0000 100 chrXIII:631739-634821 1.0000 100 chrXIV:493919-495636 1.0000 100 chrIV:1354564-1356025 1.0000 100 chrVII:648730-649418 1.0000 100 chrXI:617739-619286 1.0000 100 chrII:9369-9853 1.0000 100 chrV:396172-397923 1.0000 100 chrIII:78283-78892 1.0000 100 chrXV:759049-759545 1.0000 100 chrIV:1201504-1202060 1.0000 100 chrIV:1278646-1279024 1.0000 100 chrVII:555144-556690 1.0000 100 chrXI:24730-26364 1.0000 100 chrXI:258423-259510 1.0000 100 chrVIII:132817-133340 1.0000 100 chrXIII:923430-924360 1.0000 100 chrVIII:103849-105906 1.0000 100 chrXIII:504673-505183 1.0000 100 chrIV:619715-620248 1.0000 100 chrVIII:466756-467273 1.0000 100 chrIV:1362042-1362610 1.0000 100 chrVII:706670-707339 1.0000 100 chrX:227726-227826 1.0000 100 chrIV:340236-341683 1.0000 100 chrXII:522162-523275 1.0000 100 chrIV:359339-359830 1.0000 100 chrXIII:290475-291150 1.0000 100 chrIV:306689-310181 1.0000 100 chrVII:400796-401768 1.0000 100 chrIX:127463-128300 1.0000 100 chrXII:459636-459983 1.0000 100 chrXII:1028197-1028590 1.0000 100 chrVIII:381110-383380 1.0000 100 chrIV:1164948-1165252 1.0000 100 chrXV:113561-113963 1.0000 100 chrX:378050-378150 1.0000 100 chrIV:437517-438050 1.0000 100 chrXI:551550-552376 1.0000 100 chrII:612275-614812 1.0000 100 chrVIII:374604-375831 1.0000 100 chrXIV:569686-570161 1.0000 100 chrIV:1450255-1451261 1.0000 100 chrXIV:499242-501689 1.0000 100 chrX:523852-523952 1.0000 100 chrVI:223256-224151 1.0000 100 chrXII:948874-953168 1.0000 100 chrXVI:828942-829378 1.0000 100 chrVI:53247-55263 1.0000 100 chrVIII:388676-389213 1.0000 100 chrXVI:819341-819824 1.0000 100 chrXV:710017-710363 1.0000 100 chrXI:230941-231638 1.0000 100 chrII:140139-140854 1.0000 100 chrV:99741-100322 1.0000 100 chrIV:1236498-1238493 1.0000 100 chrIII:315674-316616 1.0000 100 chrVIII:34484-36297 1.0000 100 chrIII:137245-138998 1.0000 100 chrXII:88221-88784 1.0000 100 chrXVI:188350-189165 1.0000 100 chrIV:591008-592210 1.0000 100 chrXV:54882-55413 1.0000 100 chrX:745244-745344 1.0000 100 chrIV:992582-993092 1.0000 100 chrII:372889-376410 1.0000 100 chrXV:92122-94865 1.0000 100 chrXIII:861208-861536 1.0000 100 chrXIII:161942-164324 1.0000 100 chrXIV:559217-559880 1.0000 100 chrIV:1352337-1352748 1.0000 100 chrXII:86852-87208 1.0000 100 chrVI:167259-167654 1.0000 100 chrX:415777-415877 1.0000 100 chrVII:544406-546092 1.0000 100 chrXIV:575063-577378 1.0000 100 chrXVI:571970-572582 1.0000 100 chrIV:355252-357773 1.0000 100 chrXVI:453439-454075 1.0000 100 chrII:167643-169659 1.0000 100 chrXV:281735-282458 1.0000 100 chrII:165068-165547 1.0000 100 chrV:491083-491422 1.0000 100 chrXVI:404552-407763 1.0000 100 chrV:438450-438988 1.0000 100 chrVI:4457-5431 1.0000 100 chrIV:1461528-1462069 1.0000 100 chrXI:219576-220084 1.0000 100 chrXVI:645247-646675 1.0000 100 chrXVI:40238-40740 1.0000 100 chrV:442997-443489 1.0000 100 chrXIII:807726-808548 1.0000 100 chrVII:73685-74256 1.0000 100 chrXII:737655-738364 1.0000 100 chrVII:345799-346665 1.0000 100 chrXII:1051910-1052414 1.0000 100 chrIV:1016988-1017507 1.0000 100 chrXV:967977-968466 1.0000 100 chrV:435031-436031 1.0000 100 chrXV:854017-854445 1.0000 100 chrIV:1243118-1243335 1.0000 100 chrVII:23296-23639 1.0000 100 chrXIII:258985-259497 1.0000 100 chrVII:483193-483880 1.0000 100 chrXIII:463313-463859 1.0000 100 chrXIV:65139-65637 1.0000 100 chrII:226870-227390 1.0000 100 chrIV:1401174-1403420 1.0000 100 chrV:77578-79386 1.0000 100 chrVII:310428-312390 1.0000 100 chrXV:424386-424669 1.0000 100 chrVII:364085-364453 1.0000 100 chrXVI:770167-771139 1.0000 100 chrIX:370216-370615 1.0000 100 chrXV:505106-505516 1.0000 100 chrIV:1488800-1490587 1.0000 100 chrXI:382197-382474 1.0000 100 chrXII:6-289 1.0000 100 chrIV:721757-722139 1.0000 100 chrIV:555410-556698 1.0000 100 chrXII:921312-922617 1.0000 100 chrX:58918-59018 1.0000 100 chrXVI:744046-744644 1.0000 100 chrXVI:377930-378988 1.0000 100 chrXI:517765-518118 1.0000 100 chrXIII:91666-92115 1.0000 100 chrXV:464242-464741 1.0000 100 chrV:152093-153281 1.0000 100 chrV:441795-442658 1.0000 100 chrXVI:66899-67498 1.0000 100 chrXIII:119213-119526 1.0000 100 chrVII:784686-785784 1.0000 100 chrIV:765263-765569 1.0000 100 chrVI:137256-137857 1.0000 100 chrXIV:546938-547413 1.0000 100 chrXVI:678836-679472 1.0000 100 chrIV:83262-83808 1.0000 100 chrXII:817882-820552 1.0000 100 chrIII:227708-228225 1.0000 100 chrIV:519548-519952 1.0000 100 chrXVI:172844-174096 1.0000 100 chrVI:269849-270157 1.0000 100 chrVII:736189-736542 1.0000 100 chrIX:68182-69566 1.0000 100 chrXIII:362518-363298 1.0000 100 chrIV:1305405-1306091 1.0000 100 chrXIV:217275-217637 1.0000 100 chrI:71721-73610 1.0000 100 chrIV:488470-489201 1.0000 100 chrVIII:296861-297252 1.0000 100 chrXII:673078-674569 1.0000 100 chrVII:702810-703607 1.0000 100 chrIV:946135-946602 1.0000 100 chrXI:326087-327585 1.0000 100 chrVII:779400-779894 1.0000 100 chrIV:155804-156312 1.0000 100 chrV:60901-62172 1.0000 100 chrXIV:560112-561139 1.0000 100 chrIII:162520-164135 1.0000 100 chrVI:82347-84400 1.0000 100 chrIV:32-384 1.0000 100 chrXII:975821-976242 1.0000 100 chrVI:210431-210912 1.0000 100 chrV:174746-174994 1.0000 100 chrVII:422877-423407 1.0000 100 chrIV:644941-645400 1.0000 100 chrIV:416309-417369 1.0000 100 chrVII:323399-324028 1.0000 100 chrIX:324174-324620 1.0000 100 chrX:233648-233748 1.0000 100 chrXII:710292-711199 1.0000 100 chrXI:282553-284487 1.0000 100 chrVII:774123-774636 1.0000 100 chrXI:142407-144252 1.0000 100 chrXIII:420316-420867 1.0000 100 chrII:181306-181660 1.0000 100 chrIX:257353-258372 1.0000 100 chrVIII:85139-85510 1.0000 100 chrXVI:214406-215992 1.0000 100 chrIII:28542-31174 1.0000 100 chrXIV:585347-586606 1.0000 100 chrIV:132639-133481 1.0000 100 chrVII:205299-205850 1.0000 100 chrXI:46127-47009 1.0000 100 chrXI:578735-579293 1.0000 100 chrXIV:351189-352952 1.0000 100 chrXIII:253238-253593 1.0000 100 chrVII:1004007-1004424 1.0000 100 chrIV:538949-539405 1.0000 100 chrXIII:913803-915659 1.0000 100 chrIV:129704-131015 1.0000 100 chrX:172677-172777 1.0000 100 chrXI:379442-379911 1.0000 100 chrXV:989027-989500 1.0000 100 chrXV:234231-234608 1.0000 100 chrIV:449600-450009 1.0000 100 chrXIV:783435-784310 1.0000 100 chrXIV:173973-174675 1.0000 100 chrIV:229440-230725 1.0000 100 chrX:663405-663505 1.0000 100 chrIII:14414-15013 1.0000 100 chrXI:1-1025 1.0000 100 chrII:415505-415878 1.0000 100 chrXV:912057-912601 1.0000 100 chrXII:404040-404444 1.0000 100 chrIV:321619-321983 1.0000 100 chrXIII:556981-557629 1.0000 100 chrXII:1071566-1071764 1.0000 100 chrXIII:675112-675367 1.0000 100 chrIII:123370-123835 1.0000 100 chrV:250113-251440 1.0000 100 chrXV:407643-408213 1.0000 100 chrXVI:699908-700745 1.0000 100 chrXI:140769-141472 1.0000 100 chrXII:426892-427480 1.0000 100 chrV:85037-86878 1.0000 100 chrXV:925191-925434 1.0000 100 chrVII:930787-931212 1.0000 100 chrXII:567966-569467 1.0000 100 chrX:159920-160020 1.0000 100 chrIV:1434422-1434693 1.0000 100 chrIX:336127-336632 1.0000 100 chrXV:340085-340580 1.0000 100 chrVII:1050201-1050665 1.0000 100 chrXVI:768704-769503 1.0000 100 chrXV:228077-228567 1.0000 100 chrXII:903389-903796 1.0000 100 chrVIII:517968-518740 1.0000 100 chrXV:300858-301359 1.0000 100 chrII:36161-36581 1.0000 100 chrXII:636707-640145 1.0000 100 chrVII:472465-472769 1.0000 100 chrIV:490216-492599 1.0000 100 chrXVI:242620-243305 1.0000 100 chrXIV:738850-739766 1.0000 100 chrXVI:74967-76741 1.0000 100 chrVII:876171-876731 1.0000 100 chrV:176834-177461 1.0000 100 chrIII:68226-68641 1.0000 100 chrX:121287-121387 1.0000 100 chrII:544469-544854 1.0000 100 chrV:321897-323600 1.0000 100 chrVII:914832-915252 1.0000 100 chrIV:434067-434560 1.0000 100 chrXI:430552-431683 1.0000 100 chrVIII:122096-122658 1.0000 100 chrI:6-1114 1.0000 100 chrV:6146-6590 1.0000 100 chrX:541318-541418 1.0000 100 chrXI:490733-491238 1.0000 100 chrVII:254117-254748 1.0000 100 chrVIII:48200-48589 1.0000 100 chrVII:440526-442090 1.0000 100 chrXII:605122-605635 1.0000 100 chrVII:919828-920211 1.0000 100 chrXI:108736-110150 1.0000 100 chrII:326617-327112 1.0000 100 chrXIII:372215-372709 1.0000 100 chrI:138924-139367 1.0000 100 chrIV:1256853-1257299 1.0000 100 chrXI:83951-84465 1.0000 100 chrX:90023-90123 1.0000 100 chrX:293875-293975 1.0000 100 chrX:422675-422775 1.0000 100 chrI:229461-230191 1.0000 100 chrXIII:183780-184205 1.0000 100 chrXIV:104568-105090 1.0000 100 chrIV:541238-542144 1.0000 100 chrX:204510-204610 1.0000 100 chrI:81855-82296 1.0000 100 chrXIV:96024-96611 1.0000 100 chrXV:159267-161436 1.0000 100 chrX:424292-424392 1.0000 100 chrXII:1017838-1019428 1.0000 100 chrXIV:619447-620104 1.0000 100 chrXVI:431402-434375 1.0000 100 chrXI:458366-458999 1.0000 100 chrXV:305016-305566 1.0000 100 chrX:291061-291161 1.0000 100 chrIX:2-244 1.0000 100 chrXII:65421-65716 1.0000 100 chrIV:802565-803020 1.0000 100 chrXII:374203-374608 1.0000 100 chrII:159817-160045 1.0000 100 chrIX:325510-326068 1.0000 100 chrIV:1300464-1301359 1.0000 100 chrXV:841734-842960 1.0000 100 chrX:414789-414889 1.0000 100 chrXIII:408509-408789 1.0000 100 chrXV:232004-232385 1.0000 100 chrXI:158170-159311 1.0000 100 chrXIII:761548-763263 1.0000 100 chrIII:142051-143015 1.0000 100 chrXIII:731970-733523 1.0000 100 chrVIII:125880-127482 1.0000 100 chrXIII:219248-221204 1.0000 100 chrXII:498286-499907 1.0000 100 chrXIII:872669-872977 1.0000 100 chrXVI:280562-282977 1.0000 100 chrXVI:352128-352685 1.0000 100 chrXIII:880406-880950 1.0000 100 chrVII:364876-366723 1.0000 100 chrVII:794168-794584 1.0000 100 chrVII:700200-701258 1.0000 100 chrXIII:168590-169033 1.0000 100 chrXVI:860112-860636 1.0000 100 chrVI:191294-191814 1.0000 100 chrIX:174819-175237 1.0000 100 chrXV:259260-259888 1.0000 100 chrIV:1524238-1525672 1.0000 100 chrXIII:767939-768648 1.0000 100 chrX:531577-531677 1.0000 100 chrXIV:725963-726409 1.0000 100 chrXIII:540351-540856 1.0000 100 chrIV:1150623-1151187 1.0000 100 chrIV:520396-521413 1.0000 100 chrX:702318-702418 1.0000 100 chrVII:479533-482967 1.0000 100 chrVII:845393-845933 1.0000 100 chrXII:932057-932542 1.0000 100 chrIX:254225-254578 1.0000 100 chrXV:384768-385002 1.0000 100 chrXI:518719-519368 1.0000 100 chrXIV:301066-303846 1.0000 100 chrV:469241-469886 1.0000 100 chrVI:204786-205200 1.0000 100 chrXV:1003919-1004934 1.0000 100 chrVII:771905-772942 1.0000 100 chrVII:730936-731409 1.0000 100 chrXII:241575-243457 1.0000 100 chrVI:226507-226932 1.0000 100 chrXIV:229450-230728 1.0000 100 chrXII:809149-810394 1.0000 100 chrXII:645830-646224 1.0000 100 chrII:604083-607143 1.0000 100 chrI:141134-143695 1.0000 100 chrXVI:425243-425450 1.0000 100 chrXI:67744-68391 1.0000 100 chrVIII:455588-455875 1.0000 100 chrVII:828463-828985 1.0000 100 chrXV:987554-987832 1.0000 100 chrIV:568672-569257 1.0000 100 chrXIV:6495-7170 1.0000 100 chrXII:855491-857631 1.0000 100 chrVII:287070-287765 1.0000 100 chrVIII:146022-146448 1.0000 100 chrXVI:701856-702307 1.0000 100 chrXV:353893-354328 1.0000 100 chrXIII:886542-888342 1.0000 100 chrV:302279-303578 1.0000 100 chrXV:27838-28111 1.0000 100 chrII:255116-257157 1.0000 100 chrX:390847-390947 1.0000 100 chrIV:411216-411678 1.0000 100 chrV:207135-207616 1.0000 100 chrXVI:581807-582280 1.0000 100 chrIX:138125-139395 1.0000 100 chrX:396570-396670 1.0000 100 chrXII:167746-168260 1.0000 100 chrV:487116-487657 1.0000 100 chrVII:561400-561954 1.0000 100 chrXII:198242-199732 1.0000 100 chrVII:110416-110936 1.0000 100 chrXV:444605-446249 1.0000 100 chrIX:210515-210944 1.0000 100 chrXVI:576112-576370 1.0000 100 chrXVI:689351-689880 1.0000 100 chrIII:82373-82817 1.0000 100 chrVII:608996-610249 1.0000 100 chrIV:893980-894292 1.0000 100 chrX:354005-354105 1.0000 100 chrXIV:602099-602542 1.0000 100 chrV:430971-431576 1.0000 100 chrVII:533814-535222 1.0000 100 chrVIII:74893-75909 1.0000 100 chrIII:177063-179272 1.0000 100 chrIV:974118-974673 1.0000 100 chrX:374202-374302 1.0000 100 chrV:434387-434774 1.0000 100 chrXIV:102498-102968 1.0000 100 chrVII:726388-728072 1.0000 100 chrV:407138-410030 1.0000 100 chrIX:183282-183714 1.0000 100 chrVII:938977-939744 1.0000 100 chrXI:313167-313675 1.0000 100 chrXVI:97720-99122 1.0000 100 chrIV:331263-332624 1.0000 100 chrXI:74375-74982 1.0000 100 chrXII:262853-263951 1.0000 100 chrII:332287-333809 1.0000 100 chrII:443890-445129 1.0000 100 chrXV:1025700-1026085 1.0000 100 chrXIII:296308-298945 1.0000 100 chrXI:463459-463819 1.0000 100 chrIV:1080274-1081008 1.0000 100 chrXIII:267630-268378 1.0000 100 chrXII:201655-202998 1.0000 100 chrXII:784151-784576 1.0000 100 chrVII:576465-577446 1.0000 100 chrXIII:572675-573258 1.0000 100 chrVII:405293-405739 1.0000 100 chrXI:307968-308456 1.0000 100 chrXV:80342-83544 1.0000 100 chrIV:980736-981262 1.0000 100 chrXV:438446-439452 1.0000 100 chrIII:228704-229136 1.0000 100 chrVIII:475518-475901 1.0000 100 chrI:68286-68852 1.0000 100 chrXI:322420-322675 1.0000 100 chrVI:180647-181266 1.0000 100 chrV:225157-225715 1.0000 100 chrXIV:505935-506680 1.0000 100 chrXIII:378892-379629 1.0000 100 chrVI:63982-65381 1.0000 100 chrXV:487223-487688 1.0000 100 chrXI:355327-356473 1.0000 100 chrXII:628114-628642 1.0000 100 chrVIII:16765-17269 1.0000 100 chrXII:781032-781898 1.0000 100 chrX:68975-69075 1.0000 100 chrXV:252846-254685 1.0000 100 chrII:644953-645427 1.0000 100 chrIV:116341-118232 1.0000 100 chrI:180932-181469 1.0000 100 chrXI:533743-534284 1.0000 100 chrV:138428-141517 1.0000 100 chrIII:168914-169259 1.0000 100 chrII:88931-90014 1.0000 100 chrII:197229-197877 1.0000 100 chrXII:728154-728715 1.0000 100 chrXII:47671-49162 1.0000 100 chrXIV:62014-64579 1.0000 100 chrX:454298-454398 1.0000 100 chrV:130829-131399 1.0000 100 chrXII:366014-366576 1.0000 100 chrVII:541615-542178 1.0000 100 chrIV:216575-218073 1.0000 100 chrXV:663547-664103 1.0000 100 chrXIII:23745-26401 1.0000 100 chrXV:380617-381201 1.0000 100 chrVIII:134057-134625 1.0000 100 chrII:347401-347892 1.0000 100 chrXI:614168-614424 1.0000 100 chrXV:167751-168522 1.0000 100 chrX:348826-348926 1.0000 100 chrXIV:715439-716623 1.0000 100 chrIII:6-1310 1.0000 100 chrXIII:145849-147207 1.0000 100 chrIV:221084-222362 1.0000 100 chrIV:234149-234787 1.0000 100 chrIII:168110-168600 1.0000 100 chrXV:216227-216745 1.0000 100 chrVI:95440-95901 1.0000 100 chrV:288170-288780 1.0000 100 chrV:492194-492573 1.0000 100 chrXIV:567878-568517 1.0000 100 chrX:355135-355235 1.0000 100 chrV:551123-551588 1.0000 100 chrXVI:653823-655016 1.0000 100 chrII:592314-593283 1.0000 100 chrI:182334-182790 1.0000 100 chrXII:649078-651366 1.0000 100 chrXI:93762-94112 1.0000 100 chrXIII:306039-307044 1.0000 100 chrXIV:374683-375097 1.0000 100 chrV:362148-363291 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--GAL11/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--GAL11/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--GAL11/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.294 C 0.206 G 0.206 T 0.294 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--GAL11/background): A 0.308 C 0.192 G 0.192 T 0.308 ******************************************************************************** ******************************************************************************** MOTIF SCSMRKTGGKTAAGGCGYCAGACTVDWAA MEME-1 width = 29 sites = 75 llr = 1539 E-value = 3.6e-328 ******************************************************************************** -------------------------------------------------------------------------------- Motif SCSMRKTGGKTAAGGCGYCAGACTVDWAA MEME-1 Description -------------------------------------------------------------------------------- Simplified A :12551:1::1a71::1235:7::44489 pos.-specific C 5953:1:1:21:11:a:5611:8:21::: probability G 5:22442783::28a:911172::2312: matrix T ::1:1482258::::::3:2112a135:1 bits 2.4 ** 2.1 ** 1.9 * ** 1.7 * * *** ** Relative 1.4 ** * * **** ** Entropy 1.2 ** * * **** * ** ** (29.6 bits) 1.0 ** *** ******* * ** ** 0.7 ** * *** ******* * **** ** 0.5 ***** *********** * **** *** 0.2 ************************* *** 0.0 ----------------------------- Multilevel GCCAATTGGTTAAGGCGCCAGACTAATAA consensus C GCGGG TG TAT G GGAG sequence G CT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCSMRKTGGKTAAGGCGYCAGACTVDWAA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrV:288170-288780 - 62 1.37e-13 AGGCACTATG GCCGAGTGGTTAAGGCGACAGACTTGAAA TCTGTTGGGC chrXVI:689351-689880 + 9 1.37e-13 GCACTATG GCCGAGTGGTTAAGGCGACAGACTTGAAA TCTGTTGGGC chrXV:353893-354328 - 16 3.36e-13 TGCTTCTATG GCCAAGTTGGTAAGGCGCCACACTAGTAA TGTGGAGATC chrIX:174819-175237 + 62 3.36e-13 AGCTTCTATG GCCAAGTTGGTAAGGCGCCACACTAGTAA TGTGGAGATC chrIX:325510-326068 + 18 3.36e-13 AGCTTCTATG GCCAAGTTGGTAAGGCGCCACACTAGTAA TGTGGAGATC chrXIV:104568-105090 + 35 3.36e-13 AGCTTCTATG GCCAAGTTGGTAAGGCGCCACACTAGTAA TGTGGAGATC chrIV:434067-434560 - 36 3.36e-13 AGCTTCTATG GCCAAGTTGGTAAGGCGCCACACTAGTAA TGTGGAGATC chrX:58918-59018 - 14 3.36e-13 AGCTTCTATG GCCAAGTTGGTAAGGCGCCACACTAGTAA TGTGGAGATC chrVIII:115944-116410 - 15 3.36e-13 AGCTTCTATG GCCAAGTTGGTAAGGCGCCACACTAGTAA TGTGGAGATC chrII:266169-266698 + 4 3.36e-13 ATG GCCAAGTTGGTAAGGCGCCACACTAGTAA TGTGGAGATC chrI:182334-182790 - 54 3.11e-12 TGGCAACTTG GCCGAGTGGTTAAGGCGAAAGATTAGAAA TCTTTTGGGC chrIV:980736-981262 - 69 3.11e-12 TTG GCCGAGTGGTTAAGGCGAAAGATTAGAAA TCTTTTGGGC chrXII:167746-168260 - 35 3.11e-12 TGGCAACTTG GCCGAGTGGTTAAGGCGAAAGATTAGAAA TCTTTTGGGC chrII:226870-227390 + 4 3.11e-12 TTG GCCGAGTGGTTAAGGCGAAAGATTAGAAA TCTTTTGGGC chrXIII:258985-259497 - 11 3.11e-12 TGGCAACTTG GCCGAGTGGTTAAGGCGAAAGATTAGAAA TCTTTTGGGC chrX:523852-523952 - 7 3.11e-12 AGGCAACTTG GCCGAGTGGTTAAGGCGAAAGATTAGAAA TCTTTT chrIV:437517-438050 + 48 3.11e-12 AGGCAACTTG GCCGAGTGGTTAAGGCGAAAGATTAGAAA TCTTTTGGGC chrVIII:132817-133340 - 42 3.11e-12 TGGCAACTTG GCCGAGTGGTTAAGGCGAAAGATTAGAAA TCTTTTGGGC chrXV:487223-487688 + 44 5.52e-12 GACTCCATGG CCAAGTTGGTTAAGGCGTGCGACTGTTAA TCGCAAGATC chrXI:74375-74982 + 6 5.52e-12 CATGG CCAAGTTGGTTAAGGCGTGCGACTGTTAA TCGCAAGATC chrXIV:102498-102968 + 43 5.52e-12 GACTCCATGG CCAAGTTGGTTAAGGCGTGCGACTGTTAA TCGCAAGATC chrVII:730936-731409 + 25 5.52e-12 GACTCCATGG CCAAGTTGGTTAAGGCGTGCGACTGTTAA TCGCAAGATC chrXV:228077-228567 + 69 5.52e-12 GACTCCATGG CCAAGTTGGTTAAGGCGTGCGACTGTTAA TCG chrXII:975821-976242 - 37 5.52e-12 GACTCCATGG CCAAGTTGGTTAAGGCGTGCGACTGTTAA TCGCAAGATC chrVI:137256-137857 - 15 5.52e-12 GACTCCATGG CCAAGTTGGTTAAGGCGTGCGACTGTTAA TCGCAAGATC chrXIV:632377-632879 + 31 5.52e-12 GACTCCATGG CCAAGTTGGTTAAGGCGTGCGACTGTTAA TCGCAAGATC chrIII:227708-228225 + 35 8.34e-12 TGGCACTATG GCCGAGTGGTTAAGGCGAGAGACTCGAAT GGAATAAAAA chrV:551123-551588 - 15 1.42e-11 GGTCTCTTGG CCCAGTTGGTTAAGGCACCGTGCTAATAA CGCGGGGATC chrII:197229-197877 + 1 1.42e-11 . CCCAGTTGGTTAAGGCACCGTGCTAATAA CGCGGGGATC chrIX:183282-183714 - 27 1.42e-11 GGTCTCTTGG CCCAGTTGGTTAAGGCACCGTGCTAATAA CGCGGGGATC chrXIV:602099-602542 + 52 1.42e-11 GGTCTCTTGG CCCAGTTGGTTAAGGCACCGTGCTAATAA CGCGGGGATC chrV:442997-443489 - 44 1.42e-11 GGTCTCTTGG CCCAGTTGGTTAAGGCACCGTGCTAATAA CGCGGGGATC chrXVI:819341-819824 + 7 1.42e-11 TCTTGG CCCAGTTGGTTAAGGCACCGTGCTAATAA CGCGGGGATC chrXIV:569686-570161 - 29 1.42e-11 GGTCTCTTGG CCCAGTTGGTTAAGGCACCGTGCTAATAA CGCGGGGATC chrVII:738884-739423 + 29 1.42e-11 GGTCTCTTGG CCCAGTTGGTTAAGGCACCGTGCTAATAA CGCGGGGATC chrXVI:880164-880576 - 11 1.42e-11 GGTCTCTTGG CCCAGTTGGTTAAGGCACCGTGCTAATAA CGCGGGGATC chrXII:734703-734999 + 11 1.42e-11 GGTCTCTTGG CCCAGTTGGTTAAGGCACCGTGCTAATAA CGCGGGGATC chrII:347401-347892 + 17 9.77e-11 GGAGGGTTGG CCGAGTGGTCTAAGGCGGCAGACTTAAGA TCTGTTGGAC chrXIV:725963-726409 - 43 9.77e-11 GGAGGGTTGG CCGAGTGGTCTAAGGCGGCAGACTTAAGA TCTGTTGGAC chrX:424292-424392 - 16 9.77e-11 GGAGGGTTGG CCGAGTGGTCTAAGGCGGCAGACTTAAGA TCTGTTGGAC chrXI:83951-84465 + 60 9.77e-11 GGAGGGTTGG CCGAGTGGTCTAAGGCGGCAGACTTAAGA TCTGTTGGAC chrIV:519548-519952 + 53 9.77e-11 GGAGGGTTGG CCGAGTGGTCTAAGGCGGCAGACTTAAGA TCTGTTGGAC chrII:9369-9853 + 32 9.77e-11 GGAGGGTTGG CCGAGTGGTCTAAGGCGGCAGACTTAAGA TCTGTTGGAC chrI:180932-181469 + 1 2.84e-10 . CCGAGCGGTCTAAGGCGCCTGATTCAAGA AATATCTTGA chrXII:628114-628642 + 65 2.84e-10 GGTTGTTTGG CCGAGCGGTCTAAGGCGCCTGATTCAAGA AAATATC chrVII:422877-423407 + 10 2.84e-10 GTTGTTTGG CCGAGCGGTCTAAGGCGCCTGATTCAAGA AATATCTTGA chrIV:1461528-1462069 - 43 2.84e-10 GGTTGTTTGG CCGAGCGGTCTAAGGCGCCTGATTCAAGA AAAAATCTTG chrXIII:504673-505183 + 27 2.84e-10 GGTTGTTTGG CCGAGCGGTCTAAGGCGCCTGATTCAAGA AATATCTTGA chrV:492194-492573 - 54 1.56e-09 ATTCCTCGTG GCCCAATGGTCACGGCGTCTGGCTACGAA CCAGAAGATT chrXII:374203-374608 + 9 1.56e-09 TCCTCGTG GCCCAATGGTCACGGCGTCTGGCTACGAA CCAGAAGATT chrXI:490733-491238 + 42 1.56e-09 GTTCCTCGTG GCCCAATGGTCACGGCGTCTGGCTACGAA CCAGAAGATT chrXV:340085-340580 - 52 1.56e-09 GTTCCTCGTG GCCCAATGGTCACGGCGTCTGGCTACGAA CCAGAAGATT chrX:233648-233748 + 72 1.56e-09 GTTCCTCGTG GCCCAATGGTCACGGCGTCTGGCTACGAA chrXIV:374683-375097 + 38 2.20e-09 AGCGGACTTA GCTCAGTTGGGAGAGCGCCAGACTGAAGA AAAACTTCGG chrVI:157710-158248 - 41 2.20e-09 AGCGGATTTA GCTCAGTTGGGAGAGCGCCAGACTGAAGA AAAAACTTCG chrXVI:560039-560491 - 37 2.20e-09 AGCGGATTTA GCTCAGTTGGGAGAGCGCCAGACTGAAGA AAAAACTTCG chrVI:226507-226932 - 54 3.32e-09 TGCCTTGTTG GCGCAATCGGTAGCGCGTATGACTCTTAA TCATAAGGTT chrX:414789-414889 + 2 3.32e-09 G GCGCAATCGGTAGCGCGTATGACTCTTAA TCATAAGGTT chrVII:876171-876731 + 2 3.32e-09 G GCGCAATCGGTAGCGCGTATGACTCTTAA TCATAAGGTT chrIV:1352337-1352748 - 9 3.32e-09 AGCCTTGTTG GCGCAATCGGTAGCGCGTATGACTCTTAA TCATAAGG chrIV:1201504-1202060 + 27 3.32e-09 AGCCTTGTTG GCGCAATCGGTAGCGCGTATGACTCTTAA TCATAAGGTT chrVII:205299-205850 + 7 6.20e-09 GTTTGG CCGAGCGGTCTAAGGCGCCTGATTCAAGC AATATCTTGA chrX:354005-354105 + 62 8.34e-09 TCTCGGTAGC CAAGTTGGTTTAAGGCGCAAGACTGTAAT TTACCACTAC chrXIII:168590-169033 + 45 8.34e-09 TCTCGGTAGC CAAGTTGGTTTAAGGCGCAAGACTGTAAT TTACCACTAC chrVI:210431-210912 - 47 8.34e-09 TCTCGGTAGC CAAGTTGGTTTAAGGCGCAAGACTGTAAT TTACCACTAC chrIV:946135-946602 + 5 8.34e-09 TAGC CAAGTTGGTTTAAGGCGCAAGACTGTAAT TTATCACTAC chrVI:167259-167654 + 42 8.34e-09 TCTCGGTAGC CAAGTTGGTTTAAGGCGCAAGACTGTAAT TTACCACTAC chrX:542773-542873 - 8 8.34e-09 TCTCGGTAGC CAAGTTGGTTTAAGGCGCAAGACTGTAAT TTATCAC chrVI:191294-191814 - 72 1.03e-08 . GCCGAGTGGTTAAGGCGATGCCCTGCTAT TTCCTCAGAA chrIV:359339-359830 + 52 2.80e-08 ATCCTTGTTA GCTCAGTTGGTAGAGCGTTCGGCTTTTAA GCGCATTTGC chrXIII:572675-573258 - 2 3.17e-08 AGCTTCAGTA GCTCAGTAGGAAGAGCGTCAGTCTCATAA T chrX:390847-390947 - 51 3.17e-08 TGCTTCAGTA GCTCAGTAGGAAGAGCGTCAGTCTCATAA TCTGAAGGTC chrX:422675-422775 + 2 3.17e-08 A GCTCAGTAGGAAGAGCGTCAGTCTCATAA TCTGAAGGTC chrIV:1175590-1176054 + 66 3.17e-08 AGCTTCAGTA GCTCAGTAGGAAGAGCGTCAGTCTCATAA TCTGAA chrXV:854017-854445 - 41 1.89e-07 AGGGCACATG GCGCAGTTGGTAGCGCGCTTCCCTTGCAA GGAAGAGGTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCSMRKTGGKTAAGGCGYCAGACTVDWAA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrV:288170-288780 1.4e-13 61_[-1]_10 chrXVI:689351-689880 1.4e-13 8_[+1]_63 chrXV:353893-354328 3.4e-13 15_[-1]_56 chrIX:174819-175237 3.4e-13 61_[+1]_10 chrIX:325510-326068 3.4e-13 17_[+1]_54 chrXIV:104568-105090 3.4e-13 34_[+1]_37 chrIV:434067-434560 3.4e-13 35_[-1]_36 chrX:58918-59018 3.4e-13 13_[-1]_58 chrVIII:115944-116410 3.4e-13 14_[-1]_57 chrII:266169-266698 3.4e-13 3_[+1]_68 chrI:182334-182790 3.1e-12 53_[-1]_18 chrIV:980736-981262 3.1e-12 68_[-1]_3 chrXII:167746-168260 3.1e-12 34_[-1]_37 chrII:226870-227390 3.1e-12 3_[+1]_68 chrXIII:258985-259497 3.1e-12 10_[-1]_61 chrX:523852-523952 3.1e-12 6_[-1]_65 chrIV:437517-438050 3.1e-12 47_[+1]_24 chrVIII:132817-133340 3.1e-12 41_[-1]_30 chrXV:487223-487688 5.5e-12 43_[+1]_28 chrXI:74375-74982 5.5e-12 5_[+1]_66 chrXIV:102498-102968 5.5e-12 42_[+1]_29 chrVII:730936-731409 5.5e-12 24_[+1]_47 chrXV:228077-228567 5.5e-12 68_[+1]_3 chrXII:975821-976242 5.5e-12 36_[-1]_35 chrVI:137256-137857 5.5e-12 14_[-1]_57 chrXIV:632377-632879 5.5e-12 30_[+1]_41 chrIII:227708-228225 8.3e-12 34_[+1]_37 chrV:551123-551588 1.4e-11 14_[-1]_57 chrII:197229-197877 1.4e-11 [+1]_71 chrIX:183282-183714 1.4e-11 26_[-1]_45 chrXIV:602099-602542 1.4e-11 51_[+1]_20 chrV:442997-443489 1.4e-11 43_[-1]_28 chrXVI:819341-819824 1.4e-11 6_[+1]_65 chrXIV:569686-570161 1.4e-11 28_[-1]_43 chrVII:738884-739423 1.4e-11 28_[+1]_43 chrXVI:880164-880576 1.4e-11 10_[-1]_61 chrXII:734703-734999 1.4e-11 10_[+1]_61 chrII:347401-347892 9.8e-11 16_[+1]_55 chrXIV:725963-726409 9.8e-11 42_[-1]_29 chrX:424292-424392 9.8e-11 15_[-1]_56 chrXI:83951-84465 9.8e-11 59_[+1]_12 chrIV:519548-519952 9.8e-11 52_[+1]_19 chrII:9369-9853 9.8e-11 31_[+1]_40 chrI:180932-181469 2.8e-10 [+1]_71 chrXII:628114-628642 2.8e-10 64_[+1]_7 chrVII:422877-423407 2.8e-10 9_[+1]_62 chrIV:1461528-1462069 2.8e-10 42_[-1]_29 chrXIII:504673-505183 2.8e-10 26_[+1]_45 chrV:492194-492573 1.6e-09 53_[-1]_18 chrXII:374203-374608 1.6e-09 8_[+1]_63 chrXI:490733-491238 1.6e-09 41_[+1]_30 chrXV:340085-340580 1.6e-09 51_[-1]_20 chrX:233648-233748 1.6e-09 71_[+1] chrXIV:374683-375097 2.2e-09 37_[+1]_34 chrVI:157710-158248 2.2e-09 40_[-1]_31 chrXVI:560039-560491 2.2e-09 36_[-1]_35 chrVI:226507-226932 3.3e-09 53_[-1]_18 chrX:414789-414889 3.3e-09 1_[+1]_70 chrVII:876171-876731 3.3e-09 1_[+1]_70 chrIV:1352337-1352748 3.3e-09 8_[-1]_63 chrIV:1201504-1202060 3.3e-09 26_[+1]_45 chrVII:205299-205850 6.2e-09 6_[+1]_65 chrX:354005-354105 8.3e-09 61_[+1]_10 chrXIII:168590-169033 8.3e-09 44_[+1]_27 chrVI:210431-210912 8.3e-09 46_[-1]_25 chrIV:946135-946602 8.3e-09 4_[+1]_67 chrVI:167259-167654 8.3e-09 41_[+1]_30 chrX:542773-542873 8.3e-09 7_[-1]_64 chrVI:191294-191814 1e-08 71_[-1] chrIV:359339-359830 2.8e-08 51_[+1]_20 chrXIII:572675-573258 3.2e-08 1_[-1]_70 chrX:390847-390947 3.2e-08 50_[-1]_21 chrX:422675-422775 3.2e-08 1_[+1]_70 chrIV:1175590-1176054 3.2e-08 65_[+1]_6 chrXV:854017-854445 1.9e-07 40_[-1]_31 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCSMRKTGGKTAAGGCGYCAGACTVDWAA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SCSMRKTGGKTAAGGCGYCAGACTVDWAA width=29 seqs=75 chrV:288170-288780 ( 62) GCCGAGTGGTTAAGGCGACAGACTTGAAA 1 chrXVI:689351-689880 ( 9) GCCGAGTGGTTAAGGCGACAGACTTGAAA 1 chrXV:353893-354328 ( 16) GCCAAGTTGGTAAGGCGCCACACTAGTAA 1 chrIX:174819-175237 ( 62) GCCAAGTTGGTAAGGCGCCACACTAGTAA 1 chrIX:325510-326068 ( 18) GCCAAGTTGGTAAGGCGCCACACTAGTAA 1 chrXIV:104568-105090 ( 35) GCCAAGTTGGTAAGGCGCCACACTAGTAA 1 chrIV:434067-434560 ( 36) GCCAAGTTGGTAAGGCGCCACACTAGTAA 1 chrX:58918-59018 ( 14) GCCAAGTTGGTAAGGCGCCACACTAGTAA 1 chrVIII:115944-116410 ( 15) GCCAAGTTGGTAAGGCGCCACACTAGTAA 1 chrII:266169-266698 ( 4) GCCAAGTTGGTAAGGCGCCACACTAGTAA 1 chrI:182334-182790 ( 54) GCCGAGTGGTTAAGGCGAAAGATTAGAAA 1 chrIV:980736-981262 ( 69) GCCGAGTGGTTAAGGCGAAAGATTAGAAA 1 chrXII:167746-168260 ( 35) GCCGAGTGGTTAAGGCGAAAGATTAGAAA 1 chrII:226870-227390 ( 4) GCCGAGTGGTTAAGGCGAAAGATTAGAAA 1 chrXIII:258985-259497 ( 11) GCCGAGTGGTTAAGGCGAAAGATTAGAAA 1 chrX:523852-523952 ( 7) GCCGAGTGGTTAAGGCGAAAGATTAGAAA 1 chrIV:437517-438050 ( 48) GCCGAGTGGTTAAGGCGAAAGATTAGAAA 1 chrVIII:132817-133340 ( 42) GCCGAGTGGTTAAGGCGAAAGATTAGAAA 1 chrXV:487223-487688 ( 44) CCAAGTTGGTTAAGGCGTGCGACTGTTAA 1 chrXI:74375-74982 ( 6) CCAAGTTGGTTAAGGCGTGCGACTGTTAA 1 chrXIV:102498-102968 ( 43) CCAAGTTGGTTAAGGCGTGCGACTGTTAA 1 chrVII:730936-731409 ( 25) CCAAGTTGGTTAAGGCGTGCGACTGTTAA 1 chrXV:228077-228567 ( 69) CCAAGTTGGTTAAGGCGTGCGACTGTTAA 1 chrXII:975821-976242 ( 37) CCAAGTTGGTTAAGGCGTGCGACTGTTAA 1 chrVI:137256-137857 ( 15) CCAAGTTGGTTAAGGCGTGCGACTGTTAA 1 chrXIV:632377-632879 ( 31) CCAAGTTGGTTAAGGCGTGCGACTGTTAA 1 chrIII:227708-228225 ( 35) GCCGAGTGGTTAAGGCGAGAGACTCGAAT 1 chrV:551123-551588 ( 15) CCCAGTTGGTTAAGGCACCGTGCTAATAA 1 chrII:197229-197877 ( 1) CCCAGTTGGTTAAGGCACCGTGCTAATAA 1 chrIX:183282-183714 ( 27) CCCAGTTGGTTAAGGCACCGTGCTAATAA 1 chrXIV:602099-602542 ( 52) CCCAGTTGGTTAAGGCACCGTGCTAATAA 1 chrV:442997-443489 ( 44) CCCAGTTGGTTAAGGCACCGTGCTAATAA 1 chrXVI:819341-819824 ( 7) CCCAGTTGGTTAAGGCACCGTGCTAATAA 1 chrXIV:569686-570161 ( 29) CCCAGTTGGTTAAGGCACCGTGCTAATAA 1 chrVII:738884-739423 ( 29) CCCAGTTGGTTAAGGCACCGTGCTAATAA 1 chrXVI:880164-880576 ( 11) CCCAGTTGGTTAAGGCACCGTGCTAATAA 1 chrXII:734703-734999 ( 11) CCCAGTTGGTTAAGGCACCGTGCTAATAA 1 chrII:347401-347892 ( 17) CCGAGTGGTCTAAGGCGGCAGACTTAAGA 1 chrXIV:725963-726409 ( 43) CCGAGTGGTCTAAGGCGGCAGACTTAAGA 1 chrX:424292-424392 ( 16) CCGAGTGGTCTAAGGCGGCAGACTTAAGA 1 chrXI:83951-84465 ( 60) CCGAGTGGTCTAAGGCGGCAGACTTAAGA 1 chrIV:519548-519952 ( 53) CCGAGTGGTCTAAGGCGGCAGACTTAAGA 1 chrII:9369-9853 ( 32) CCGAGTGGTCTAAGGCGGCAGACTTAAGA 1 chrI:180932-181469 ( 1) CCGAGCGGTCTAAGGCGCCTGATTCAAGA 1 chrXII:628114-628642 ( 65) CCGAGCGGTCTAAGGCGCCTGATTCAAGA 1 chrVII:422877-423407 ( 10) CCGAGCGGTCTAAGGCGCCTGATTCAAGA 1 chrIV:1461528-1462069 ( 43) CCGAGCGGTCTAAGGCGCCTGATTCAAGA 1 chrXIII:504673-505183 ( 27) CCGAGCGGTCTAAGGCGCCTGATTCAAGA 1 chrV:492194-492573 ( 54) GCCCAATGGTCACGGCGTCTGGCTACGAA 1 chrXII:374203-374608 ( 9) GCCCAATGGTCACGGCGTCTGGCTACGAA 1 chrXI:490733-491238 ( 42) GCCCAATGGTCACGGCGTCTGGCTACGAA 1 chrXV:340085-340580 ( 52) GCCCAATGGTCACGGCGTCTGGCTACGAA 1 chrX:233648-233748 ( 72) GCCCAATGGTCACGGCGTCTGGCTACGAA 1 chrXIV:374683-375097 ( 38) GCTCAGTTGGGAGAGCGCCAGACTGAAGA 1 chrVI:157710-158248 ( 41) GCTCAGTTGGGAGAGCGCCAGACTGAAGA 1 chrXVI:560039-560491 ( 37) GCTCAGTTGGGAGAGCGCCAGACTGAAGA 1 chrVI:226507-226932 ( 54) GCGCAATCGGTAGCGCGTATGACTCTTAA 1 chrX:414789-414889 ( 2) GCGCAATCGGTAGCGCGTATGACTCTTAA 1 chrVII:876171-876731 ( 2) GCGCAATCGGTAGCGCGTATGACTCTTAA 1 chrIV:1352337-1352748 ( 9) GCGCAATCGGTAGCGCGTATGACTCTTAA 1 chrIV:1201504-1202060 ( 27) GCGCAATCGGTAGCGCGTATGACTCTTAA 1 chrVII:205299-205850 ( 7) CCGAGCGGTCTAAGGCGCCTGATTCAAGC 1 chrX:354005-354105 ( 62) CAAGTTGGTTTAAGGCGCAAGACTGTAAT 1 chrXIII:168590-169033 ( 45) CAAGTTGGTTTAAGGCGCAAGACTGTAAT 1 chrVI:210431-210912 ( 47) CAAGTTGGTTTAAGGCGCAAGACTGTAAT 1 chrIV:946135-946602 ( 5) CAAGTTGGTTTAAGGCGCAAGACTGTAAT 1 chrVI:167259-167654 ( 42) CAAGTTGGTTTAAGGCGCAAGACTGTAAT 1 chrX:542773-542873 ( 8) CAAGTTGGTTTAAGGCGCAAGACTGTAAT 1 chrVI:191294-191814 ( 72) GCCGAGTGGTTAAGGCGATGCCCTGCTAT 1 chrIV:359339-359830 ( 52) GCTCAGTTGGTAGAGCGTTCGGCTTTTAA 1 chrXIII:572675-573258 ( 2) GCTCAGTAGGAAGAGCGTCAGTCTCATAA 1 chrX:390847-390947 ( 51) GCTCAGTAGGAAGAGCGTCAGTCTCATAA 1 chrX:422675-422775 ( 2) GCTCAGTAGGAAGAGCGTCAGTCTCATAA 1 chrIV:1175590-1176054 ( 66) GCTCAGTAGGAAGAGCGTCAGTCTCATAA 1 chrXV:854017-854445 ( 41) GCGCAGTTGGTAGCGCGCTTCCCTTGCAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCSMRKTGGKTAAGGCGYCAGACTVDWAA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 43200 bayes= 6.43083 E= 3.6e-328 -1287 132 144 -1287 -194 226 -1287 -1287 -72 128 32 -153 72 40 32 -1287 76 -1287 106 -194 -121 -126 101 38 -1287 -1287 32 130 -253 -152 188 -83 -1287 -1287 199 -36 -1287 -26 61 83 -253 -152 -226 145 170 -1287 -1287 -1287 128 -152 -4 -1287 -153 -126 208 -1287 -1287 -1287 238 -1287 -1287 238 -1287 -1287 -121 -1287 217 -1287 -95 124 -126 -1 -28 161 -68 -294 72 -68 -39 -44 -1287 -53 193 -121 120 -285 15 -253 -1287 208 -1287 -72 -1287 -1287 -1287 170 42 15 32 -121 33 -126 47 -21 47 -384 -152 68 138 -1287 6 -1287 151 -384 -1287 -153 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCSMRKTGGKTAAGGCGYCAGACTVDWAA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 75 E= 3.6e-328 0.000000 0.480000 0.520000 0.000000 0.080000 0.920000 0.000000 0.000000 0.186667 0.466667 0.240000 0.106667 0.506667 0.253333 0.240000 0.000000 0.520000 0.000000 0.400000 0.080000 0.133333 0.080000 0.386667 0.400000 0.000000 0.000000 0.240000 0.760000 0.053333 0.066667 0.706667 0.173333 0.000000 0.000000 0.760000 0.240000 0.000000 0.160000 0.293333 0.546667 0.053333 0.066667 0.040000 0.840000 1.000000 0.000000 0.000000 0.000000 0.746667 0.066667 0.186667 0.000000 0.106667 0.080000 0.813333 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.133333 0.000000 0.866667 0.000000 0.160000 0.453333 0.080000 0.306667 0.253333 0.586667 0.120000 0.040000 0.506667 0.120000 0.146667 0.226667 0.000000 0.133333 0.733333 0.133333 0.706667 0.026667 0.213333 0.053333 0.000000 0.813333 0.000000 0.186667 0.000000 0.000000 0.000000 1.000000 0.413333 0.213333 0.240000 0.133333 0.386667 0.080000 0.266667 0.266667 0.426667 0.013333 0.066667 0.493333 0.800000 0.000000 0.200000 0.000000 0.880000 0.013333 0.000000 0.106667 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCSMRKTGGKTAAGGCGYCAGACTVDWAA MEME-1 regular expression -------------------------------------------------------------------------------- [GC]C[CG][ACG][AG][TG][TG]G[GT][TG]TAAGGCG[CT][CA][AT]G[AG]CT[AGC][AGT][TA][AG]A -------------------------------------------------------------------------------- Time 350.13 secs. ******************************************************************************** ******************************************************************************** MOTIF MDVSSGGRHTCGAACCSSBGAYCTYM MEME-2 width = 26 sites = 102 llr = 1798 E-value = 5.2e-364 ******************************************************************************** -------------------------------------------------------------------------------- Motif MDVSSGGRHTCGAACCSSBGAYCTYM MEME-2 Description -------------------------------------------------------------------------------- Simplified A 333:13:64:::aa::12:26:::13 pos.-specific C 5:454:::2:7:::a8532:156245 probability G 142357a42::a::::35481121:1 matrix T 13:2::::2a3::::21:3:241642 bits 2.4 * * * 2.1 * * * 1.9 * * * 1.7 * * **** Relative 1.4 * ******* * Entropy 1.2 ** ******* * (25.4 bits) 1.0 *** ******* * 0.7 ***** ******* * * ** 0.5 * ****** *********** **** 0.2 ******** ***************** 0.0 -------------------------- Multilevel CGCCGGGAATCGAACCCGGGACCTCC consensus ATAGCA GC T TGCTA TGCTA sequence AGT T AC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MDVSSGGRHTCGAACCSSBGAYCTYM MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------------- chrIII:123370-123835 + 31 5.05e-15 ATGTGGGGCG AGCCGGGACTCGAACCCGGGACCTCC CGCACCCTAA chrXIV:631611-632131 + 31 5.05e-15 AATGGGGGCG AGCCGGGACTCGAACCCGGGACCTCC CGCACCCTAA chrXV:663547-664103 + 43 1.27e-11 AAAACGATTT CGCCCAGGATCGAACTGGGGACGTTC TGCGTGTTAA chrXIII:372215-372709 + 39 1.27e-11 AAAATGATTT CGCCCAGGATCGAACTGGGGACGTTC TGCGTGTTAA chrVIII:85139-85510 + 30 1.27e-11 AAATTGATTT CGCCCAGGATCGAACTGGGGACGTTC TGCGTGTTAA chrXIII:420316-420867 + 53 1.27e-11 AAAATGATTT CGCCCAGGATCGAACTGGGGACGTTC TGCGTGTTAA chrV:438450-438988 - 73 1.27e-11 TT CGCCCAGGATCGAACTGGGGACGTTC TGCGTGTTAA chrVII:412101-412584 + 8 1.27e-11 TTGATTT CGCCCAGGATCGAACTGGGGACGTTC TGCGTGTTAA chrXIII:586395-586904 + 43 1.27e-11 AAAATGATTT CGCCCAGGATCGAACTGGGGACGTTC TGCGTGTTAA chrII:197229-197877 - 33 1.82e-11 AAAATGGTCT CTAGCGGGATCGAACCGCTGATCCCC GCGTTATTAG chrIX:210515-210944 - 28 1.82e-11 AATATGGTCT CTAGCGGGATCGAACCGCTGATCCCC GCGTTATTAG chrV:442997-443489 + 15 1.82e-11 AATATGGTCT CTAGCGGGATCGAACCGCTGATCCCC GCGTTATTAG chrXVI:819341-819824 - 39 1.82e-11 TAAATGGTCT CTAGCGGGATCGAACCGCTGATCCCC GCGTTATTAG chrVII:738884-739423 - 61 1.82e-11 TAAATGGTCT CTAGCGGGATCGAACCGCTGATCCCC GCGTTATTAG chrXII:734703-734999 - 43 1.82e-11 TAAATGGTCT CTAGCGGGATCGAACCGCTGATCCCC GCGTTATTAG chrIV:667754-668251 + 61 1.82e-11 AAAATGGTCT CTAGCGGGATCGAACCGCTGATCCCC GCGTTATTAG chrXV:854017-854445 + 12 5.88e-11 AAATTGGACG CAACCGGAATCGAACCGATGACCTCT TCCTTGCAAG chrX:396570-396670 + 2 1.71e-10 A AGCCCGGAATCGAACCGGGGGCCCAA CGATGGCAAC chrVII:845393-845933 - 75 1.71e-10 . AGCCCGGAATCGAACCGGGGGCCCAA CGATGGCAAC chrX:531577-531677 - 58 1.71e-10 AAACTGCGCA AGCCCGGAATCGAACCGGGGGCCCAA CGATGGCAAC chrVII:930787-931212 + 10 1.71e-10 AAATGCGCA AGCCCGGAATCGAACCGGGGGCCCAA CGATGGCAAC chrIV:488470-489201 + 18 1.71e-10 ATTCTGATCC AACCGAGGTTCGAACTCGGGATCTTC GCCGTGTAAA chrVI:162024-162487 - 62 1.71e-10 AAACTGCGCA AGCCCGGAATCGAACCGGGGGCCCAA CGATGGCAAC chrVIII:475518-475901 + 53 2.28e-10 AAAATGTTCC AACCGAGGATCGAACTCGGGACCTTT GCCGTGTGAA chrIV:1016988-1017507 + 16 2.28e-10 GAAACTCCGA AGCGGGGAGTCGAACCCCGGTCTCCA CGGTGAGAAC chrIII:168110-168600 + 2 2.63e-10 C TACCCGGATTCGAACCGGGGTTGTCC GGATCAAAAC chrVIII:134057-134625 - 70 2.63e-10 GGTCC TACCCGGATTCGAACCGGGGTTGTCC GGATCAAAAC chrIV:644941-645400 + 39 2.63e-10 AAAAAGGTCC TACCCGGATTCGAACCGGGGTTGTCC GGATCAAAAC chrII:350557-351133 - 72 2.63e-10 TCT TACCCGGATTCGAACCGGGGTTGTCC GGATCAAAAC chrX:355135-355235 - 29 3.47e-10 AAAGCACTCA CGATGGGGGTCGAACCCATAATCTTC TGATTAGAAG chrVII:405293-405739 - 44 3.47e-10 AAAGCACTCA CGATGGGGGTCGAACCCATAATCTTC TGATTAGAAG chrX:374202-374302 + 37 3.47e-10 AAAGCACTCA CGATGGGGGTCGAACCCATAATCTTC TGATTAGAAG chrIV:568672-569257 - 8 3.47e-10 AAAGCACTCA CGATGGGGGTCGAACCCATAATCTTC TGATTAG chrVII:828463-828985 + 55 3.47e-10 AAAGCACTCA CGATGGGGGTCGAACCCATAATCTTC TGATTAGAAG chrVII:736189-736542 - 65 3.47e-10 ACAACACTCA CGATGGGGGTCGAACCCATAATCTTC TGATTAGAAG chrV:130829-131399 + 24 4.55e-10 AAATAGGTCT TACCCGGATTCGAACCGGGGTTGTTC GGATCAAAAC chrVII:779400-779894 - 59 5.92e-10 ATCTTGAGCG GTACGAGAATCGAACCCGTGTCCCCA CCTTGGAAGG chrVI:226507-226932 + 25 7.66e-10 GATAAGCCCT GTAGGGGGCTCGAACCCCTAACCTTA TGATTAAGAG chrX:414789-414889 - 34 7.66e-10 TATTAGCCCT GTAGGGGGCTCGAACCCCTAACCTTA TGATTAAGAG chrVII:876171-876731 - 34 7.66e-10 AGAAAGCCCT GTAGGGGGCTCGAACCCCTAACCTTA TGATTAAGAG chrIV:1201504-1202060 - 59 7.66e-10 TATTAGCCCT GTAGGGGGCTCGAACCCCTAACCTTA TGATTAAGAG chrV:135138-135702 + 61 7.66e-10 AGAAAGCCCT GTAGGGGGCTCGAACCCCTAACCTTA TGATTAAGAG chrXI:202823-203303 - 27 7.66e-10 AGAAAGCCCT GTAGGGGGCTCGAACCCCTAACCTTA TGATTAAGAG chrVII:185365-186071 + 52 7.66e-10 AGATAGCCCT GTAGGGGGCTCGAACCCCTAACCTTA TGATTAAGAG chrXIV:567878-568517 - 39 1.11e-09 TAAAGGGGCG AGCTGGGAATTGAACCCAGGGCCTCT CGCATGCTTT chrV:492194-492573 + 25 1.11e-09 AATCCTTCCC CGCCAGGACTTGAACCTGGAATCTTC TGGTTCGTAG chrXII:374203-374608 - 41 1.11e-09 AAATCTTCCC CGCCAGGACTTGAACCTGGAATCTTC TGGTTCGTAG chrXI:490733-491238 - 74 1.11e-09 C CGCCAGGACTTGAACCTGGAATCTTC TGGTTCGTAG chrXV:340085-340580 + 23 1.11e-09 AAATCTTCCC CGCCAGGACTTGAACCTGGAATCTTC TGGTTCGTAG chrXIV:546938-547413 - 40 1.11e-09 TAACGGGGCG AGCTGGGAATTGAACCCAGGGCCTCT CGCATGCTTT chrVIII:388676-389213 + 5 1.11e-09 GGCG AGCTGGGAATTGAACCCAGGGCCTCT CGCATGCTTT chrIV:619715-620248 + 44 1.11e-09 AAATCTTCCC CGCCAGGACTTGAACCTGGAATCTTC TGGTTCGTAG chrIX:325510-326068 - 50 1.60e-09 AAATTGCTTC CAATCGGATTTGAACCGATGATCTCC ACATTACTAG chrXIV:104568-105090 - 67 1.60e-09 TATGCTTC CAATCGGATTTGAACCGATGATCTCC ACATTACTAG chrIV:434067-434560 + 7 1.60e-09 TGCTTC CAATCGGATTTGAACCGATGATCTCC ACATTACTAG chrII:266169-266698 - 36 1.60e-09 AAAATGCTTC CAATCGGATTTGAACCGATGATCTCC ACATTACTAG chrVII:541615-542178 - 44 2.02e-09 AACACTCCGA TACGGGGAGTCGAACCCCGGTCTCCA CGGTGAAAGC chrII:644953-645427 - 67 2.02e-09 AACTCCGA TACGGGGAGTCGAACCCCGGTCTCCA CGGTGAAAGC chrV:487116-487657 + 1 2.02e-09 . TACGGGGAGTCGAACCCCGGTCTCCA CGGTGAAAGC chrV:176834-177461 - 42 2.02e-09 AGTACTCCGA TACGGGGAGTCGAACCCCGGTCTCCA CGGTGAAAGC chrVIII:146022-146448 + 63 2.84e-09 AGATTGGACG AGTCCGGAATCGAACCGGAGACCTCT CCCATGCTAA chrVII:774123-774636 - 61 2.84e-09 AATTTGGACG AGTCCGGAATCGAACCGGAGACCTCT CCCATGCTAA chrXII:656725-657186 + 35 2.84e-09 TACTTGGACG AGTCCGGAATCGAACCGGAGACCTCT CCCATGCTAA chrXIII:320960-321322 + 62 2.84e-09 AAAATGGACG AGTCCGGAATCGAACCGGAGACCTCT CCCATGCTAA chrIV:884154-884733 - 69 2.84e-09 TGCTCG AGGTGGGGTTTGAACCCACGACGGTC GCGTTGCTTT chrX:390847-390947 + 22 1.10e-08 AATATGCTCC AGGGGAGGTTCGAACTCTCGACCTTC AGATTATGAG chrX:422675-422775 - 34 1.10e-08 AATGTGCTCC AGGGGAGGTTCGAACTCTCGACCTTC AGATTATGAG chrXI:578735-579293 - 65 1.10e-08 AGAACTCCTC ATAGGGGGCTCGAACCCCTGACATTT CGGTATCCTT chrXII:875247-875617 - 58 1.10e-08 AGAACTCCTC ATAGGGGGCTCGAACCCCTGACATTT CGGTATCCTT chrVIII:466756-467273 - 66 1.46e-08 TAATGCCAC CTGCCAGAATTGAACTAGCGACCTTT GCATTACAAG chrI:182334-182790 + 16 1.93e-08 ATAACGACAA CTGCAGGACTCGAACCTGCGCGGGCA AAGCCCAAAA chrIV:980736-981262 + 31 1.93e-08 AAAACGACAA CTGCAGGACTCGAACCTGCGCGGGCA AAGCCCAAAA chrVII:561400-561954 + 41 1.93e-08 ATAACGACAA CTGCAGGACTCGAACCTGCGCGGGCA AAGCCCAAAA chrII:226870-227390 - 45 1.93e-08 ATAACGACAA CTGCAGGACTCGAACCTGCGCGGGCA AAGCCCAAAA chrVIII:132817-133340 + 4 1.93e-08 CAA CTGCAGGACTCGAACCTGCGCGGGCA AAGCCCAAAA chrXI:74375-74982 - 38 4.57e-08 TAAGCGACCC CAGTGAGGGTTGAACTCACGATCTTG CGATTAACAG chrXIV:102498-102968 - 75 4.57e-08 . CAGTGAGGGTTGAACTCACGATCTTG CGATTAACAG chrVII:730936-731409 - 57 4.57e-08 AAAACGACCC CAGTGAGGGTTGAACTCACGATCTTG CGATTAACAG chrVII:700200-701258 - 46 4.57e-08 ATATTGATAC CCGCGGGGTTTGAACCCGCGCCTCCG AAGAGATCAG chrXII:975821-976242 + 8 4.57e-08 ACGACCC CAGTGAGGGTTGAACTCACGATCTTG CGATTAACAG chrXIV:632377-632879 - 63 4.57e-08 AAAACGACCC CAGTGAGGGTTGAACTCACGATCTTG CGATTAACAG chrX:204510-204610 - 69 5.38e-08 CTCCGC GACGGGGAATTGAACCCCGATCTGGC ACGCGACAAG chrX:541318-541418 - 53 5.38e-08 AAATCTCCGC GACGGGGAATTGAACCCCGATCTGGC ACGCGACAAG chrIX:336127-336632 + 26 5.38e-08 AAATCTCCGC GACGGGGAATTGAACCCCGATCTGGC ACGCGACAAG chrXII:426892-427480 - 36 5.38e-08 AATTCTCCGC GACGGGGAATTGAACCCCGATCTGGC ACGCGACAAG chrXIII:463313-463859 - 58 5.38e-08 AAATCTCCGC GACGGGGAATTGAACCCCGATCTGGC ACGCGACAAG chrVI:210431-210912 + 4 5.83e-08 CCC GGGGGCGAGTCGAACGCCCGATCTCA AGATTTCGTA chrIV:946135-946602 - 51 5.83e-08 AAAATCTCCC GGGGGCGAGTCGAACGCCCGATCTCA AGATTTCGTA chrV:288170-288780 + 24 9.97e-08 AAAACGACAC CAGCAGGATTTGAACCAGCGCGGGCA GAGCCCAACA chrXVI:689351-689880 - 50 9.97e-08 AATACGACAC CAGCAGGATTTGAACCAGCGCGGGCA GAGCCCAACA chrXVI:435606-436185 + 54 9.97e-08 AGAAAGCTCG CACTCAGGATCGAACTAAGGACCAAC AGATTTGCAA chrXVI:744046-744644 - 29 1.07e-07 ATTTTGCCAC CTGTCAGAATTGAACTAACGACCTTT GCATTACAAG chrII:347401-347892 - 59 1.15e-07 TTACTGAAGG ATGCGAGGTTCGAACTCGCGCGGACA ACCGTCCAAC chrXIV:725963-726409 + 4 1.15e-07 AGG ATGCGAGGTTCGAACTCGCGCGGACA ACCGTCCAAC chrII:9369-9853 - 74 1.15e-07 G ATGCGAGGTTCGAACTCGCGCGGACA ACCGTCCAAC chrXI:313167-313675 + 36 2.63e-07 AAAATGCCAT CTCCTAGAATCGAACCAGGGTTTCAT CGGCCACAAC chrV:434387-434774 + 17 2.63e-07 AAAATGCCAT CTCCTAGAATCGAACCAGGGTTTCAT CGGCCACAAC chrVII:110416-110936 + 5 2.63e-07 CCAT CTCCTAGAATCGAACCAGGGTTTCAT CGGCCACAAC chrV:207135-207616 - 72 2.63e-07 CAT CTCCTAGAATCGAACCAGGGTTTCAT CGGCCACAAC chrVI:191294-191814 + 15 4.33e-07 AATGCGTCAC AGACAGGATTCGAACCTGCGCAGGTA AAACCCAATG chrXVI:828942-829378 - 46 1.06e-06 TTTATACTTA ATCCGAGATTCGGACCCCTAGTGACA GAATTAACCG chrV:491083-491422 + 34 3.19e-06 GCACACCCAC CTGCGGGAGTTACTCCGGGGATCGTA TGGGGTGATG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MDVSSGGRHTCGAACCSSBGAYCTYM MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:123370-123835 5.1e-15 30_[+2]_44 chrXIV:631611-632131 5.1e-15 30_[+2]_44 chrXV:663547-664103 1.3e-11 42_[+2]_32 chrXIII:372215-372709 1.3e-11 38_[+2]_36 chrVIII:85139-85510 1.3e-11 29_[+2]_45 chrXIII:420316-420867 1.3e-11 52_[+2]_22 chrV:438450-438988 1.3e-11 72_[-2]_2 chrVII:412101-412584 1.3e-11 7_[+2]_67 chrXIII:586395-586904 1.3e-11 42_[+2]_32 chrII:197229-197877 1.8e-11 32_[-2]_42 chrIX:210515-210944 1.8e-11 27_[-2]_47 chrV:442997-443489 1.8e-11 14_[+2]_60 chrXVI:819341-819824 1.8e-11 38_[-2]_36 chrVII:738884-739423 1.8e-11 60_[-2]_14 chrXII:734703-734999 1.8e-11 42_[-2]_32 chrIV:667754-668251 1.8e-11 60_[+2]_14 chrXV:854017-854445 5.9e-11 11_[+2]_63 chrX:396570-396670 1.7e-10 1_[+2]_73 chrVII:845393-845933 1.7e-10 74_[-2] chrX:531577-531677 1.7e-10 57_[-2]_17 chrVII:930787-931212 1.7e-10 9_[+2]_65 chrIV:488470-489201 1.7e-10 17_[+2]_57 chrVI:162024-162487 1.7e-10 61_[-2]_13 chrVIII:475518-475901 2.3e-10 52_[+2]_22 chrIV:1016988-1017507 2.3e-10 15_[+2]_59 chrIII:168110-168600 2.6e-10 1_[+2]_73 chrVIII:134057-134625 2.6e-10 69_[-2]_5 chrIV:644941-645400 2.6e-10 38_[+2]_36 chrII:350557-351133 2.6e-10 71_[-2]_3 chrX:355135-355235 3.5e-10 28_[-2]_46 chrVII:405293-405739 3.5e-10 43_[-2]_31 chrX:374202-374302 3.5e-10 36_[+2]_38 chrIV:568672-569257 3.5e-10 7_[-2]_67 chrVII:828463-828985 3.5e-10 54_[+2]_20 chrVII:736189-736542 3.5e-10 64_[-2]_10 chrV:130829-131399 4.5e-10 23_[+2]_51 chrVII:779400-779894 5.9e-10 58_[-2]_16 chrVI:226507-226932 7.7e-10 24_[+2]_50 chrX:414789-414889 7.7e-10 33_[-2]_41 chrVII:876171-876731 7.7e-10 33_[-2]_41 chrIV:1201504-1202060 7.7e-10 58_[-2]_16 chrV:135138-135702 7.7e-10 60_[+2]_14 chrXI:202823-203303 7.7e-10 26_[-2]_48 chrVII:185365-186071 7.7e-10 51_[+2]_23 chrXIV:567878-568517 1.1e-09 38_[-2]_36 chrV:492194-492573 1.1e-09 24_[+2]_50 chrXII:374203-374608 1.1e-09 40_[-2]_34 chrXI:490733-491238 1.1e-09 73_[-2]_1 chrXV:340085-340580 1.1e-09 22_[+2]_52 chrXIV:546938-547413 1.1e-09 39_[-2]_35 chrVIII:388676-389213 1.1e-09 4_[+2]_70 chrIV:619715-620248 1.1e-09 43_[+2]_31 chrIX:325510-326068 1.6e-09 49_[-2]_25 chrXIV:104568-105090 1.6e-09 66_[-2]_8 chrIV:434067-434560 1.6e-09 6_[+2]_68 chrII:266169-266698 1.6e-09 35_[-2]_39 chrVII:541615-542178 2e-09 43_[-2]_31 chrII:644953-645427 2e-09 66_[-2]_8 chrV:487116-487657 2e-09 [+2]_74 chrV:176834-177461 2e-09 41_[-2]_33 chrVIII:146022-146448 2.8e-09 62_[+2]_12 chrVII:774123-774636 2.8e-09 60_[-2]_14 chrXII:656725-657186 2.8e-09 34_[+2]_40 chrXIII:320960-321322 2.8e-09 61_[+2]_13 chrIV:884154-884733 2.8e-09 68_[-2]_6 chrX:390847-390947 1.1e-08 21_[+2]_53 chrX:422675-422775 1.1e-08 33_[-2]_41 chrXI:578735-579293 1.1e-08 64_[-2]_10 chrXII:875247-875617 1.1e-08 57_[-2]_17 chrVIII:466756-467273 1.5e-08 65_[-2]_9 chrI:182334-182790 1.9e-08 15_[+2]_59 chrIV:980736-981262 1.9e-08 30_[+2]_44 chrVII:561400-561954 1.9e-08 40_[+2]_34 chrII:226870-227390 1.9e-08 44_[-2]_30 chrVIII:132817-133340 1.9e-08 3_[+2]_71 chrXI:74375-74982 4.6e-08 37_[-2]_37 chrXIV:102498-102968 4.6e-08 74_[-2] chrVII:730936-731409 4.6e-08 56_[-2]_18 chrVII:700200-701258 4.6e-08 45_[-2]_29 chrXII:975821-976242 4.6e-08 7_[+2]_67 chrXIV:632377-632879 4.6e-08 62_[-2]_12 chrX:204510-204610 5.4e-08 68_[-2]_6 chrX:541318-541418 5.4e-08 52_[-2]_22 chrIX:336127-336632 5.4e-08 25_[+2]_49 chrXII:426892-427480 5.4e-08 35_[-2]_39 chrXIII:463313-463859 5.4e-08 57_[-2]_17 chrVI:210431-210912 5.8e-08 3_[+2]_71 chrIV:946135-946602 5.8e-08 50_[-2]_24 chrV:288170-288780 1e-07 23_[+2]_51 chrXVI:689351-689880 1e-07 49_[-2]_25 chrXVI:435606-436185 1e-07 53_[+2]_21 chrXVI:744046-744644 1.1e-07 28_[-2]_46 chrII:347401-347892 1.2e-07 58_[-2]_16 chrXIV:725963-726409 1.2e-07 3_[+2]_71 chrII:9369-9853 1.2e-07 73_[-2]_1 chrXI:313167-313675 2.6e-07 35_[+2]_39 chrV:434387-434774 2.6e-07 16_[+2]_58 chrVII:110416-110936 2.6e-07 4_[+2]_70 chrV:207135-207616 2.6e-07 71_[-2]_3 chrVI:191294-191814 4.3e-07 14_[+2]_60 chrXVI:828942-829378 1.1e-06 45_[-2]_29 chrV:491083-491422 3.2e-06 33_[+2]_41 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MDVSSGGRHTCGAACCSSBGAYCTYM MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF MDVSSGGRHTCGAACCSSBGAYCTYM width=26 seqs=102 chrIII:123370-123835 ( 31) AGCCGGGACTCGAACCCGGGACCTCC 1 chrXIV:631611-632131 ( 31) AGCCGGGACTCGAACCCGGGACCTCC 1 chrXV:663547-664103 ( 43) CGCCCAGGATCGAACTGGGGACGTTC 1 chrXIII:372215-372709 ( 39) CGCCCAGGATCGAACTGGGGACGTTC 1 chrVIII:85139-85510 ( 30) CGCCCAGGATCGAACTGGGGACGTTC 1 chrXIII:420316-420867 ( 53) CGCCCAGGATCGAACTGGGGACGTTC 1 chrV:438450-438988 ( 73) CGCCCAGGATCGAACTGGGGACGTTC 1 chrVII:412101-412584 ( 8) CGCCCAGGATCGAACTGGGGACGTTC 1 chrXIII:586395-586904 ( 43) CGCCCAGGATCGAACTGGGGACGTTC 1 chrII:197229-197877 ( 33) CTAGCGGGATCGAACCGCTGATCCCC 1 chrIX:210515-210944 ( 28) CTAGCGGGATCGAACCGCTGATCCCC 1 chrV:442997-443489 ( 15) CTAGCGGGATCGAACCGCTGATCCCC 1 chrXVI:819341-819824 ( 39) CTAGCGGGATCGAACCGCTGATCCCC 1 chrVII:738884-739423 ( 61) CTAGCGGGATCGAACCGCTGATCCCC 1 chrXII:734703-734999 ( 43) CTAGCGGGATCGAACCGCTGATCCCC 1 chrIV:667754-668251 ( 61) CTAGCGGGATCGAACCGCTGATCCCC 1 chrXV:854017-854445 ( 12) CAACCGGAATCGAACCGATGACCTCT 1 chrX:396570-396670 ( 2) AGCCCGGAATCGAACCGGGGGCCCAA 1 chrVII:845393-845933 ( 75) AGCCCGGAATCGAACCGGGGGCCCAA 1 chrX:531577-531677 ( 58) AGCCCGGAATCGAACCGGGGGCCCAA 1 chrVII:930787-931212 ( 10) AGCCCGGAATCGAACCGGGGGCCCAA 1 chrIV:488470-489201 ( 18) AACCGAGGTTCGAACTCGGGATCTTC 1 chrVI:162024-162487 ( 62) AGCCCGGAATCGAACCGGGGGCCCAA 1 chrVIII:475518-475901 ( 53) AACCGAGGATCGAACTCGGGACCTTT 1 chrIV:1016988-1017507 ( 16) AGCGGGGAGTCGAACCCCGGTCTCCA 1 chrIII:168110-168600 ( 2) TACCCGGATTCGAACCGGGGTTGTCC 1 chrVIII:134057-134625 ( 70) TACCCGGATTCGAACCGGGGTTGTCC 1 chrIV:644941-645400 ( 39) TACCCGGATTCGAACCGGGGTTGTCC 1 chrII:350557-351133 ( 72) TACCCGGATTCGAACCGGGGTTGTCC 1 chrX:355135-355235 ( 29) CGATGGGGGTCGAACCCATAATCTTC 1 chrVII:405293-405739 ( 44) CGATGGGGGTCGAACCCATAATCTTC 1 chrX:374202-374302 ( 37) CGATGGGGGTCGAACCCATAATCTTC 1 chrIV:568672-569257 ( 8) CGATGGGGGTCGAACCCATAATCTTC 1 chrVII:828463-828985 ( 55) CGATGGGGGTCGAACCCATAATCTTC 1 chrVII:736189-736542 ( 65) CGATGGGGGTCGAACCCATAATCTTC 1 chrV:130829-131399 ( 24) TACCCGGATTCGAACCGGGGTTGTTC 1 chrVII:779400-779894 ( 59) GTACGAGAATCGAACCCGTGTCCCCA 1 chrVI:226507-226932 ( 25) GTAGGGGGCTCGAACCCCTAACCTTA 1 chrX:414789-414889 ( 34) GTAGGGGGCTCGAACCCCTAACCTTA 1 chrVII:876171-876731 ( 34) GTAGGGGGCTCGAACCCCTAACCTTA 1 chrIV:1201504-1202060 ( 59) GTAGGGGGCTCGAACCCCTAACCTTA 1 chrV:135138-135702 ( 61) GTAGGGGGCTCGAACCCCTAACCTTA 1 chrXI:202823-203303 ( 27) GTAGGGGGCTCGAACCCCTAACCTTA 1 chrVII:185365-186071 ( 52) GTAGGGGGCTCGAACCCCTAACCTTA 1 chrXIV:567878-568517 ( 39) AGCTGGGAATTGAACCCAGGGCCTCT 1 chrV:492194-492573 ( 25) CGCCAGGACTTGAACCTGGAATCTTC 1 chrXII:374203-374608 ( 41) CGCCAGGACTTGAACCTGGAATCTTC 1 chrXI:490733-491238 ( 74) CGCCAGGACTTGAACCTGGAATCTTC 1 chrXV:340085-340580 ( 23) CGCCAGGACTTGAACCTGGAATCTTC 1 chrXIV:546938-547413 ( 40) AGCTGGGAATTGAACCCAGGGCCTCT 1 chrVIII:388676-389213 ( 5) AGCTGGGAATTGAACCCAGGGCCTCT 1 chrIV:619715-620248 ( 44) CGCCAGGACTTGAACCTGGAATCTTC 1 chrIX:325510-326068 ( 50) CAATCGGATTTGAACCGATGATCTCC 1 chrXIV:104568-105090 ( 67) CAATCGGATTTGAACCGATGATCTCC 1 chrIV:434067-434560 ( 7) CAATCGGATTTGAACCGATGATCTCC 1 chrII:266169-266698 ( 36) CAATCGGATTTGAACCGATGATCTCC 1 chrVII:541615-542178 ( 44) TACGGGGAGTCGAACCCCGGTCTCCA 1 chrII:644953-645427 ( 67) TACGGGGAGTCGAACCCCGGTCTCCA 1 chrV:487116-487657 ( 1) TACGGGGAGTCGAACCCCGGTCTCCA 1 chrV:176834-177461 ( 42) TACGGGGAGTCGAACCCCGGTCTCCA 1 chrVIII:146022-146448 ( 63) AGTCCGGAATCGAACCGGAGACCTCT 1 chrVII:774123-774636 ( 61) AGTCCGGAATCGAACCGGAGACCTCT 1 chrXII:656725-657186 ( 35) AGTCCGGAATCGAACCGGAGACCTCT 1 chrXIII:320960-321322 ( 62) AGTCCGGAATCGAACCGGAGACCTCT 1 chrIV:884154-884733 ( 69) AGGTGGGGTTTGAACCCACGACGGTC 1 chrX:390847-390947 ( 22) AGGGGAGGTTCGAACTCTCGACCTTC 1 chrX:422675-422775 ( 34) AGGGGAGGTTCGAACTCTCGACCTTC 1 chrXI:578735-579293 ( 65) ATAGGGGGCTCGAACCCCTGACATTT 1 chrXII:875247-875617 ( 58) ATAGGGGGCTCGAACCCCTGACATTT 1 chrVIII:466756-467273 ( 66) CTGCCAGAATTGAACTAGCGACCTTT 1 chrI:182334-182790 ( 16) CTGCAGGACTCGAACCTGCGCGGGCA 1 chrIV:980736-981262 ( 31) CTGCAGGACTCGAACCTGCGCGGGCA 1 chrVII:561400-561954 ( 41) CTGCAGGACTCGAACCTGCGCGGGCA 1 chrII:226870-227390 ( 45) CTGCAGGACTCGAACCTGCGCGGGCA 1 chrVIII:132817-133340 ( 4) CTGCAGGACTCGAACCTGCGCGGGCA 1 chrXI:74375-74982 ( 38) CAGTGAGGGTTGAACTCACGATCTTG 1 chrXIV:102498-102968 ( 75) CAGTGAGGGTTGAACTCACGATCTTG 1 chrVII:730936-731409 ( 57) CAGTGAGGGTTGAACTCACGATCTTG 1 chrVII:700200-701258 ( 46) CCGCGGGGTTTGAACCCGCGCCTCCG 1 chrXII:975821-976242 ( 8) CAGTGAGGGTTGAACTCACGATCTTG 1 chrXIV:632377-632879 ( 63) CAGTGAGGGTTGAACTCACGATCTTG 1 chrX:204510-204610 ( 69) GACGGGGAATTGAACCCCGATCTGGC 1 chrX:541318-541418 ( 53) GACGGGGAATTGAACCCCGATCTGGC 1 chrIX:336127-336632 ( 26) GACGGGGAATTGAACCCCGATCTGGC 1 chrXII:426892-427480 ( 36) GACGGGGAATTGAACCCCGATCTGGC 1 chrXIII:463313-463859 ( 58) GACGGGGAATTGAACCCCGATCTGGC 1 chrVI:210431-210912 ( 4) GGGGGCGAGTCGAACGCCCGATCTCA 1 chrIV:946135-946602 ( 51) GGGGGCGAGTCGAACGCCCGATCTCA 1 chrV:288170-288780 ( 24) CAGCAGGATTTGAACCAGCGCGGGCA 1 chrXVI:689351-689880 ( 50) CAGCAGGATTTGAACCAGCGCGGGCA 1 chrXVI:435606-436185 ( 54) CACTCAGGATCGAACTAAGGACCAAC 1 chrXVI:744046-744644 ( 29) CTGTCAGAATTGAACTAACGACCTTT 1 chrII:347401-347892 ( 59) ATGCGAGGTTCGAACTCGCGCGGACA 1 chrXIV:725963-726409 ( 4) ATGCGAGGTTCGAACTCGCGCGGACA 1 chrII:9369-9853 ( 74) ATGCGAGGTTCGAACTCGCGCGGACA 1 chrXI:313167-313675 ( 36) CTCCTAGAATCGAACCAGGGTTTCAT 1 chrV:434387-434774 ( 17) CTCCTAGAATCGAACCAGGGTTTCAT 1 chrVII:110416-110936 ( 5) CTCCTAGAATCGAACCAGGGTTTCAT 1 chrV:207135-207616 ( 72) CTCCTAGAATCGAACCAGGGTTTCAT 1 chrVI:191294-191814 ( 15) AGACAGGATTCGAACCTGCGCAGGTA 1 chrXVI:828942-829378 ( 46) ATCCGAGATTCGGACCCCTAGTGACA 1 chrV:491083-491422 ( 34) CTGCGGGAGTTACTCCGGGGATCGTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MDVSSGGRHTCGAACCSSBGAYCTYM MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 26 n= 45000 bayes= 7.63534 E= 5.2e-364 -22 138 -38 -180 -12 -429 99 7 -12 120 29 -297 -1332 138 62 -58 -127 88 132 -297 -17 -329 188 -1332 -1332 -1332 238 -1332 88 -1332 117 -1332 38 10 -4 -58 -1332 -1332 -1332 170 -1332 190 -1332 -12 -497 -1332 237 -1332 167 -429 -429 -1332 168 -1332 -1332 -497 -1332 238 -1332 -1332 -1332 199 -329 -51 -180 129 80 -151 -51 57 132 -397 -297 29 120 -12 -39 -1332 199 -1332 96 -71 -112 -65 -497 135 -97 38 -397 162 35 -107 -265 23 -38 91 -165 120 -197 42 7 123 -171 -89 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MDVSSGGRHTCGAACCSSBGAYCTYM MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 26 nsites= 102 E= 5.2e-364 0.264706 0.500000 0.147059 0.088235 0.284314 0.009804 0.382353 0.323529 0.284314 0.441176 0.235294 0.039216 0.000000 0.500000 0.294118 0.205882 0.127451 0.352941 0.480392 0.039216 0.274510 0.019608 0.705882 0.000000 0.000000 0.000000 1.000000 0.000000 0.568627 0.000000 0.431373 0.000000 0.401961 0.205882 0.186275 0.205882 0.000000 0.000000 0.000000 1.000000 0.000000 0.715686 0.000000 0.284314 0.009804 0.000000 0.990196 0.000000 0.980392 0.009804 0.009804 0.000000 0.990196 0.000000 0.000000 0.009804 0.000000 1.000000 0.000000 0.000000 0.000000 0.764706 0.019608 0.215686 0.088235 0.470588 0.333333 0.107843 0.215686 0.284314 0.480392 0.019608 0.039216 0.235294 0.441176 0.284314 0.235294 0.000000 0.764706 0.000000 0.598039 0.117647 0.088235 0.196078 0.009804 0.490196 0.098039 0.401961 0.019608 0.588235 0.245098 0.147059 0.049020 0.225490 0.147059 0.578431 0.098039 0.441176 0.049020 0.411765 0.323529 0.450980 0.058824 0.166667 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MDVSSGGRHTCGAACCSSBGAYCTYM MEME-2 regular expression -------------------------------------------------------------------------------- [CA][GTA][CAG][CGT][GC][GA]G[AG][ACT]T[CT]GAAC[CT][CG][GCA][GTC][GA]A[CT][CG][TC][CT][CA] -------------------------------------------------------------------------------- Time 667.06 secs. ******************************************************************************** ******************************************************************************** MOTIF GTKTARTGGTTAKMAYDBNCSSTTKTCRC MEME-3 width = 29 sites = 42 llr = 871 E-value = 1.0e-149 ******************************************************************************** -------------------------------------------------------------------------------- Motif GTKTARTGGTTAKMAYDBNCSSTTKTCRC MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::1:a5:::::a:38:3:23::::1::62 pos.-specific C :1:1::31:22::5:6:236533:115:5 probability G a16::5:8a1::512:432:56:141341 matrix T :739::71:68:51:42531::79582:2 bits 2.4 * * 2.1 * * 1.9 * * 1.7 * * * * Relative 1.4 * * ** * * Entropy 1.2 * ** ** ** ** ** * (29.9 bits) 1.0 * ****** *** ** **** * 0.7 ************* ** ***** *** 0.5 **************** * ********** 0.2 ****************** ********** 0.0 ----------------------------- Multilevel GTGTAATGGTTATCACGTTCGGTTTTCAC consensus T GC CC GAGTAGCACCC G GGT sequence TCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTKTARTGGTTAKMAYDBNCSSTTKTCRC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrIII:168110-168600 - 30 6.10e-13 TGGTCCTATA GTGTAGTGGTTATCACTTTCGGTTTTGAT CCGGACAACC chrVIII:134057-134625 + 39 6.10e-13 CGGTCCTATA GTGTAGTGGTTATCACTTTCGGTTTTGAT CCGGACAACC chrV:130829-131399 - 52 6.10e-13 AGGTTTTATA GTGTAGTGGTTATCACTTTCGGTTTTGAT CCGAACAACC chrIV:802565-803020 - 23 6.10e-13 CGGTCCTATA GTGTAGTGGTTATCACTTTCGGTTTTGAT CCGGACAACC chrIV:644941-645400 - 67 6.10e-13 CTATA GTGTAGTGGTTATCACTTTCGGTTTTGAT CCGGACAACC chrXII:448453-449006 - 5 6.10e-13 CGGTCCTATA GTGTAGTGGTTATCACTTTCGGTTTTGAT CCGG chrII:350557-351133 + 41 6.10e-13 GGGTTTTATA GTGTAGTGGTTATCACTTTCGGTTTTGAT CCGGACAACC chrVII:541615-542178 + 13 2.72e-12 ATCCGATATA GTGTAACGGCTATCACATCACGCTTTCAC CGTGGAGACC chrII:644953-645427 + 36 2.72e-12 ATCCGATATA GTGTAACGGCTATCACATCACGCTTTCAC CGTGGAGACC chrV:487116-487657 - 29 2.72e-12 ATCCGATATA GTGTAACGGCTATCACATCACGCTTTCAC CGTGGAGACC chrV:176834-177461 + 11 2.72e-12 ATCCGATATA GTGTAACGGCTATCACATCACGCTTTCAC CGTGGAGACC chrIX:370216-370615 + 61 2.72e-12 ATCCGATATA GTGTAACGGCTATCACATCACGCTTTCAC CGTGGAGACC chrXIII:290475-291150 + 48 2.72e-12 ATCCGATATA GTGTAACGGCTATCACATCACGCTTTCAC CGTGGAGACC chrXVI:210036-210501 - 8 2.72e-12 GTCCGATATA GTGTAACGGCTATCACATCACGCTTTCAC CGTGGAG chrIV:568672-569257 + 59 3.18e-12 TTCCGTGATA GTTTAATGGTCAGAATGGGCGCTTGTCGC GTGCCAGATC chrX:204510-204610 + 38 3.18e-12 ATCCGTGATA GTTTAATGGTCAGAATGGGCGCTTGTCGC GTGCCAGATC chrX:541318-541418 + 22 3.18e-12 ATCCGTGATA GTTTAATGGTCAGAATGGGCGCTTGTCGC GTGCCAGATC chrIX:336127-336632 - 54 3.18e-12 ATCCGTGATA GTTTAATGGTCAGAATGGGCGCTTGTCGC GTGCCAGATC chrXII:426892-427480 + 5 3.18e-12 GATA GTTTAATGGTCAGAATGGGCGCTTGTCGC GTGCCAGATC chrXIII:463313-463859 + 27 3.18e-12 GTCCGTGATA GTTTAATGGTCAGAATGGGCGCTTGTCGC GTGCCAGATC chrXI:513178-513635 - 10 3.18e-12 TTCCGTGATA GTTTAATGGTCAGAATGGGCGCTTGTCGC GTGCCAGAT chrVII:531427-531792 + 60 3.18e-12 TTCCGTGATA GTTTAATGGTCAGAATGGGCGCTTGTCGC GTGCCAGATC chrIV:1016988-1017507 - 44 8.84e-12 ATCCGATGTA GTGTAACGGCTATCACATCACGTTCTCAC CGTGGAGACC chrIX:197358-197814 + 65 8.84e-12 ATCCGATGTA GTGTAACGGCTATCACATCACGTTCTCAC CGTGGAG chrXI:313167-313675 - 64 3.48e-10 CCATCTTA GTATAGTGGTTAGTACACATCGTTGTGGC CGATGAAACC chrV:434387-434774 - 45 3.48e-10 CGCCATCTTA GTATAGTGGTTAGTACACATCGTTGTGGC CGATGAAACC chrVII:110416-110936 - 33 3.48e-10 TGCCATCTTA GTATAGTGGTTAGTACACATCGTTGTGGC CGATGAAACC chrV:207135-207616 + 41 3.48e-10 CGCCATCTTA GTATAGTGGTTAGTACACATCGTTGTGGC CGATGAAACC chrXIV:96024-96611 - 8 9.19e-10 TGGGCGGTTA GTGTAGTGGTTATCATCCCACCCTTCCAA GGTGGGG chrVII:779400-779894 + 28 9.19e-10 CGGGCGGTTA GTGTAGTGGTTATCATCCCACCCTTCCAA GGTGGGGACA chrXIV:783435-784310 + 31 2.16e-09 GGTAATTGGA GGGTAACGGTTATGGTGGGCGGTGGTTAG TGGTAAGTAG chrVI:204786-205200 - 16 3.07e-09 CGGGCGTGTG GCGTAGTCGGTAGCGCGCTCCCTTAGCAT GGGAGAGGTC chrVII:774123-774636 + 29 3.07e-09 TGGGCGTGTG GCGTAGTCGGTAGCGCGCTCCCTTAGCAT GGGAGAGGTC chrXII:656725-657186 - 64 3.07e-09 GGCGTGTG GCGTAGTCGGTAGCGCGCTCCCTTAGCAT GGGAGAGGTC chrXII:10994-11994 - 52 4.02e-09 GGTAATTGGA GGGTAACGGTTATGGTGGACGGTGGTTAG TGGTAAGTAG chrXIV:6495-7170 - 52 8.36e-09 GGTAATTGGA GGGTAACGGTTATGATGGGCGGTGGATGG TAGTAGTAAG chrXI:578735-579293 + 10 1.22e-08 TCCTTGTTA GCTCAGTTGGTAGAGCGTTCGGCTTTTAA GCGCATTTGC chrVII:115247-115784 + 32 1.22e-08 ATCCTTGTTA GCTCAGTTGGTAGAGCGTTCGGCTTTTAA GCGCATTTGC chrXII:875247-875617 + 3 1.22e-08 TA GCTCAGTTGGTAGAGCGTTCGGCTTTTAA GCGCATTTGC chrIV:1256853-1257299 - 16 1.91e-08 AGCGAAAGTG GTTCAGTGGTTAGAATTCATGCTTCCCAA GCATGGGGCC chrX:745244-745344 + 36 2.01e-08 GGTAATTGGA GGGTAACGGTTATGGTGGACGGTGGATGG TAGTAGTAAG chrXI:458366-458999 - 64 7.90e-07 TCATTCTG GATTATTCGTCATTATTGTTCATTGTTGA ACACAATATA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTKTARTGGTTAKMAYDBNCSSTTKTCRC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:168110-168600 6.1e-13 29_[-3]_42 chrVIII:134057-134625 6.1e-13 38_[+3]_33 chrV:130829-131399 6.1e-13 51_[-3]_20 chrIV:802565-803020 6.1e-13 22_[-3]_49 chrIV:644941-645400 6.1e-13 66_[-3]_5 chrXII:448453-449006 6.1e-13 4_[-3]_67 chrII:350557-351133 6.1e-13 40_[+3]_31 chrVII:541615-542178 2.7e-12 12_[+3]_59 chrII:644953-645427 2.7e-12 35_[+3]_36 chrV:487116-487657 2.7e-12 28_[-3]_43 chrV:176834-177461 2.7e-12 10_[+3]_61 chrIX:370216-370615 2.7e-12 60_[+3]_11 chrXIII:290475-291150 2.7e-12 47_[+3]_24 chrXVI:210036-210501 2.7e-12 7_[-3]_64 chrIV:568672-569257 3.2e-12 58_[+3]_13 chrX:204510-204610 3.2e-12 37_[+3]_34 chrX:541318-541418 3.2e-12 21_[+3]_50 chrIX:336127-336632 3.2e-12 53_[-3]_18 chrXII:426892-427480 3.2e-12 4_[+3]_67 chrXIII:463313-463859 3.2e-12 26_[+3]_45 chrXI:513178-513635 3.2e-12 9_[-3]_62 chrVII:531427-531792 3.2e-12 59_[+3]_12 chrIV:1016988-1017507 8.8e-12 43_[-3]_28 chrIX:197358-197814 8.8e-12 64_[+3]_7 chrXI:313167-313675 3.5e-10 63_[-3]_8 chrV:434387-434774 3.5e-10 44_[-3]_27 chrVII:110416-110936 3.5e-10 32_[-3]_39 chrV:207135-207616 3.5e-10 40_[+3]_31 chrXIV:96024-96611 9.2e-10 7_[-3]_64 chrVII:779400-779894 9.2e-10 27_[+3]_44 chrXIV:783435-784310 2.2e-09 30_[+3]_41 chrVI:204786-205200 3.1e-09 15_[-3]_56 chrVII:774123-774636 3.1e-09 28_[+3]_43 chrXII:656725-657186 3.1e-09 63_[-3]_8 chrXII:10994-11994 4e-09 51_[-3]_20 chrXIV:6495-7170 8.4e-09 51_[-3]_20 chrXI:578735-579293 1.2e-08 9_[+3]_62 chrVII:115247-115784 1.2e-08 31_[+3]_40 chrXII:875247-875617 1.2e-08 2_[+3]_69 chrIV:1256853-1257299 1.9e-08 15_[-3]_56 chrX:745244-745344 2e-08 35_[+3]_36 chrXI:458366-458999 7.9e-07 63_[-3]_8 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTKTARTGGTTAKMAYDBNCSSTTKTCRC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GTKTARTGGTTAKMAYDBNCSSTTKTCRC width=29 seqs=42 chrIII:168110-168600 ( 30) GTGTAGTGGTTATCACTTTCGGTTTTGAT 1 chrVIII:134057-134625 ( 39) GTGTAGTGGTTATCACTTTCGGTTTTGAT 1 chrV:130829-131399 ( 52) GTGTAGTGGTTATCACTTTCGGTTTTGAT 1 chrIV:802565-803020 ( 23) GTGTAGTGGTTATCACTTTCGGTTTTGAT 1 chrIV:644941-645400 ( 67) GTGTAGTGGTTATCACTTTCGGTTTTGAT 1 chrXII:448453-449006 ( 5) GTGTAGTGGTTATCACTTTCGGTTTTGAT 1 chrII:350557-351133 ( 41) GTGTAGTGGTTATCACTTTCGGTTTTGAT 1 chrVII:541615-542178 ( 13) GTGTAACGGCTATCACATCACGCTTTCAC 1 chrII:644953-645427 ( 36) GTGTAACGGCTATCACATCACGCTTTCAC 1 chrV:487116-487657 ( 29) GTGTAACGGCTATCACATCACGCTTTCAC 1 chrV:176834-177461 ( 11) GTGTAACGGCTATCACATCACGCTTTCAC 1 chrIX:370216-370615 ( 61) GTGTAACGGCTATCACATCACGCTTTCAC 1 chrXIII:290475-291150 ( 48) GTGTAACGGCTATCACATCACGCTTTCAC 1 chrXVI:210036-210501 ( 8) GTGTAACGGCTATCACATCACGCTTTCAC 1 chrIV:568672-569257 ( 59) GTTTAATGGTCAGAATGGGCGCTTGTCGC 1 chrX:204510-204610 ( 38) GTTTAATGGTCAGAATGGGCGCTTGTCGC 1 chrX:541318-541418 ( 22) GTTTAATGGTCAGAATGGGCGCTTGTCGC 1 chrIX:336127-336632 ( 54) GTTTAATGGTCAGAATGGGCGCTTGTCGC 1 chrXII:426892-427480 ( 5) GTTTAATGGTCAGAATGGGCGCTTGTCGC 1 chrXIII:463313-463859 ( 27) GTTTAATGGTCAGAATGGGCGCTTGTCGC 1 chrXI:513178-513635 ( 10) GTTTAATGGTCAGAATGGGCGCTTGTCGC 1 chrVII:531427-531792 ( 60) GTTTAATGGTCAGAATGGGCGCTTGTCGC 1 chrIV:1016988-1017507 ( 44) GTGTAACGGCTATCACATCACGTTCTCAC 1 chrIX:197358-197814 ( 65) GTGTAACGGCTATCACATCACGTTCTCAC 1 chrXI:313167-313675 ( 64) GTATAGTGGTTAGTACACATCGTTGTGGC 1 chrV:434387-434774 ( 45) GTATAGTGGTTAGTACACATCGTTGTGGC 1 chrVII:110416-110936 ( 33) GTATAGTGGTTAGTACACATCGTTGTGGC 1 chrV:207135-207616 ( 41) GTATAGTGGTTAGTACACATCGTTGTGGC 1 chrXIV:96024-96611 ( 8) GTGTAGTGGTTATCATCCCACCCTTCCAA 1 chrVII:779400-779894 ( 28) GTGTAGTGGTTATCATCCCACCCTTCCAA 1 chrXIV:783435-784310 ( 31) GGGTAACGGTTATGGTGGGCGGTGGTTAG 1 chrVI:204786-205200 ( 16) GCGTAGTCGGTAGCGCGCTCCCTTAGCAT 1 chrVII:774123-774636 ( 29) GCGTAGTCGGTAGCGCGCTCCCTTAGCAT 1 chrXII:656725-657186 ( 64) GCGTAGTCGGTAGCGCGCTCCCTTAGCAT 1 chrXII:10994-11994 ( 52) GGGTAACGGTTATGGTGGACGGTGGTTAG 1 chrXIV:6495-7170 ( 52) GGGTAACGGTTATGATGGGCGGTGGATGG 1 chrXI:578735-579293 ( 10) GCTCAGTTGGTAGAGCGTTCGGCTTTTAA 1 chrVII:115247-115784 ( 32) GCTCAGTTGGTAGAGCGTTCGGCTTTTAA 1 chrXII:875247-875617 ( 3) GCTCAGTTGGTAGAGCGTTCGGCTTTTAA 1 chrIV:1256853-1257299 ( 16) GTTCAGTGGTTAGAATTCATGCTTCCCAA 1 chrX:745244-745344 ( 36) GGGTAACGGTTATGGTGGACGGTGGATGG 1 chrXI:458366-458999 ( 64) GATTATTCGTCATTATTGTTCATTGTTGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTKTARTGGTTAKMAYDBNCSSTTKTCRC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 43200 bayes= 11.5107 E= 1.0e-149 -1204 -1204 238 -1204 -369 -43 -101 126 -169 -1204 163 1 -1204 -101 -1204 155 170 -1204 -1204 -1204 70 -1204 131 -369 -1204 69 -1204 116 -1204 -101 212 -211 -1204 -1204 238 -1204 -1204 16 -43 106 -1204 16 -1204 135 170 -1204 -1204 -1204 -1204 -1204 124 83 -11 138 -101 -137 135 -1204 16 -1204 -1204 169 -1204 31 1 -201 116 -52 -1204 31 69 55 -89 45 31 11 -23 163 -1204 -111 -1204 124 151 -1204 -369 80 174 -1204 -1204 57 -1204 121 -1204 -1204 -101 155 -211 -143 108 55 -269 -143 -143 139 -1204 151 45 -69 106 -1204 90 -1204 -89 138 -101 -37 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTKTARTGGTTAKMAYDBNCSSTTKTCRC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 42 E= 1.0e-149 0.000000 0.000000 1.000000 0.000000 0.023810 0.142857 0.095238 0.738095 0.095238 0.000000 0.595238 0.309524 0.000000 0.095238 0.000000 0.904762 1.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.476190 0.023810 0.000000 0.309524 0.000000 0.690476 0.000000 0.095238 0.833333 0.071429 0.000000 0.000000 1.000000 0.000000 0.000000 0.214286 0.142857 0.642857 0.000000 0.214286 0.000000 0.785714 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.452381 0.547619 0.285714 0.500000 0.095238 0.119048 0.785714 0.000000 0.214286 0.000000 0.000000 0.619048 0.000000 0.380952 0.309524 0.047619 0.428571 0.214286 0.000000 0.238095 0.309524 0.452381 0.166667 0.261905 0.238095 0.333333 0.261905 0.595238 0.000000 0.142857 0.000000 0.452381 0.547619 0.000000 0.023810 0.333333 0.642857 0.000000 0.000000 0.285714 0.000000 0.714286 0.000000 0.000000 0.095238 0.904762 0.071429 0.071429 0.404762 0.452381 0.047619 0.071429 0.071429 0.809524 0.000000 0.547619 0.261905 0.190476 0.642857 0.000000 0.357143 0.000000 0.166667 0.500000 0.095238 0.238095 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTKTARTGGTTAKMAYDBNCSSTTKTCRC MEME-3 regular expression -------------------------------------------------------------------------------- GT[GT]TA[AG][TC]GG[TC][TC]A[TG][CA][AG][CT][GAT][TGC][TCG][CA][GC][GC][TC]T[TG]T[CG][AG][CT] -------------------------------------------------------------------------------- Time 972.78 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:350557-351133 1.30e-15 40_[+3(6.10e-13)]_2_[-2(2.63e-10)]_\ 3 chrVIII:384083-385915 8.61e-01 100 chrXV:40040-40666 3.03e-02 100 chrVII:255181-255667 4.48e-01 100 chrXI:333456-334960 7.70e-01 100 chrI:151597-151879 6.23e-01 100 chrIV:1359139-1360832 1.43e-01 100 chrXVI:821606-822451 3.62e-01 100 chrXIII:586395-586904 4.77e-10 42_[+2(1.27e-11)]_32 chrVII:531427-531792 9.61e-09 59_[+3(3.18e-12)]_12 chrVII:412101-412584 5.05e-10 7_[+2(1.27e-11)]_67 chrXI:517237-517516 3.96e-02 57_[+3(2.56e-05)]_14 chrIV:579002-580748 6.22e-01 100 chrIII:120932-122801 2.55e-01 100 chrXVI:435606-436185 3.90e-04 53_[+2(9.97e-08)]_21 chrIV:1012612-1013947 9.47e-01 100 chrXI:665688-666796 4.11e-01 100 chrIX:394724-395045 3.79e-01 100 chrXIV:506959-507697 7.74e-01 100 chrIV:914331-916212 2.76e-01 100 chrXII:447807-447995 6.48e-02 100 chrIX:386570-387013 7.13e-01 100 chrII:266169-266698 6.00e-16 3_[+1(3.36e-13)]_3_[-2(1.60e-09)]_\ 39 chrXI:558674-559457 2.45e-01 100 chrXVI:210036-210501 1.14e-08 7_[-3(2.72e-12)]_64 chrVII:437089-439911 1.61e-02 100 chrXV:779664-780989 6.23e-01 100 chrXII:97109-97887 1.87e-01 100 chrVII:882379-884781 3.69e-01 100 chrXV:876783-878063 9.68e-01 100 chrXIII:123264-124715 5.02e-01 100 chrV:224646-224974 2.08e-01 100 chrXVI:641164-641814 7.63e-02 100 chrII:504462-504717 5.28e-01 100 chrIV:667754-668251 3.86e-07 60_[+2(1.82e-11)]_14 chrXV:677955-679204 9.99e-01 100 chrIV:884154-884733 2.08e-06 68_[-2(2.84e-09)]_6 chrXIII:747762-748149 2.30e-02 21_[-1(3.03e-05)]_50 chrVII:185365-186071 2.42e-06 51_[+2(7.66e-10)]_23 chrXII:734703-734999 4.05e-15 10_[+1(1.42e-11)]_3_[-2(1.82e-11)]_\ 32 chrVIII:401040-401338 2.25e-01 100 chrX:690575-690675 6.71e-01 100 chrVII:371134-371528 4.88e-01 100 chrVIII:556048-557214 3.57e-01 100 chrXII:875247-875617 9.40e-15 2_[+3(1.22e-08)]_26_[-2(1.10e-08)]_\ 17 chrXIII:225287-226675 9.80e-01 100 chrXIV:88882-90097 1.27e-01 100 chrXIV:632377-632879 6.09e-13 30_[+1(5.52e-12)]_3_[-2(4.57e-08)]_\ 12 chrVII:442284-443927 4.17e-01 100 chrXVI:785576-787078 1.21e-01 100 chrXIII:5303-5798 2.36e-01 100 chrIX:98552-100054 1.05e-01 100 chrXV:619076-623365 9.46e-02 100 chrXIII:222991-224497 8.03e-01 100 chrVII:959293-959674 7.85e-01 100 chrXII:10994-11994 1.39e-05 51_[-3(4.02e-09)]_20 chrX:517649-517749 5.95e-03 24_[-1(2.37e-05)]_47 chrVII:115247-115784 1.99e-09 31_[+3(1.22e-08)]_40 chrXVI:338679-339137 5.95e-03 24_[-1(2.37e-05)]_47 chrVI:224716-225411 2.15e-01 100 chrXI:513178-513635 6.80e-08 9_[-3(3.18e-12)]_62 chrXII:837598-839500 1.82e-01 100 chrXII:92273-92882 3.09e-03 28_[+3(2.19e-05)]_43 chrXI:163243-165467 6.83e-01 100 chrV:354692-355380 6.83e-01 100 chrII:87843-88595 9.57e-01 100 chrVII:319599-320141 1.46e-03 [-2(2.63e-07)]_74 chrXIII:320960-321322 4.13e-05 61_[+2(2.84e-09)]_13 chrXIV:23430-26548 8.75e-01 100 chrII:812996-813180 1.40e-01 100 chrXII:592337-593195 8.57e-01 100 chrVIII:115944-116410 3.93e-10 14_[-1(3.36e-13)]_57 chrXI:302691-303211 5.58e-02 100 chrXII:5449-5944 2.24e-01 100 chrXII:1012092-1012404 1.48e-02 28_[+2(4.80e-05)]_46 chrII:44937-45352 6.91e-01 100 chrV:423077-424329 5.55e-01 100 chrXII:460206-460675 9.81e-01 100 chrIV:1175590-1176054 9.47e-06 65_[+1(3.17e-08)]_6 chrXII:231912-234900 1.21e-01 100 chrVII:328392-329000 8.82e-01 100 chrXVI:560039-560491 4.04e-07 36_[-1(2.20e-09)]_35 chrVI:220995-222069 1.58e-02 100 chrXIV:631611-632131 6.83e-12 30_[+2(5.05e-15)]_44 chrVII:877753-879075 1.36e-01 100 chrXII:448453-449006 1.37e-08 4_[-3(6.10e-13)]_67 chrII:60248-61286 8.33e-01 100 chrXII:939864-941303 6.76e-01 100 chrXV:978497-979334 6.13e-02 40_[-3(6.25e-05)]_31 chrVIII:147870-149302 7.37e-01 100 chrVII:227487-228757 6.65e-01 100 chrXI:202823-203303 4.05e-07 26_[-2(7.66e-10)]_48 chrXV:1070798-1071221 5.52e-01 100 chrIV:322173-323634 6.15e-01 100 chrXV:226440-226902 1.58e-01 100 chrVII:787365-788793 5.98e-01 100 chrXVI:302635-304245 6.05e-01 100 chrXII:625180-625840 5.93e-01 100 chrXVI:812841-813592 9.03e-01 100 chrVIII:562265-562573 8.91e-01 100 chrVI:157710-158248 4.08e-07 40_[-1(2.20e-09)]_31 chrXII:95535-95948 9.26e-01 100 chrXVI:642265-643304 2.54e-01 100 chrXII:1064024-1065373 6.68e-01 100 chrXII:424164-424470 2.93e-02 100 chrXVI:775631-776083 6.48e-01 100 chrVIII:175059-175385 5.00e-02 100 chrXVI:880164-880576 4.44e-07 10_[-1(1.42e-11)]_61 chrIII:294985-295842 3.20e-01 100 chrXV:109518-111256 7.44e-01 100 chrXIII:131489-132112 6.65e-01 100 chrIX:248585-249460 7.44e-01 100 chrVI:162024-162487 1.27e-07 61_[-2(1.71e-10)]_13 chrVII:148192-149541 9.90e-01 100 chrV:135138-135702 1.03e-07 2_[+3(7.70e-05)]_29_[+2(7.66e-10)]_\ 14 chrXVI:927752-928421 8.61e-01 100 chrXV:571694-572155 9.94e-01 100 chrXII:962820-963353 9.10e-01 100 chrIX:197358-197814 1.85e-07 64_[+3(8.84e-12)]_7 chrXV:409590-410259 7.78e-01 100 chrVII:823274-823712 1.97e-02 68_[+3(5.45e-05)]_3 chrXIII:625873-626988 8.82e-01 100 chrVIII:410766-411905 9.91e-01 100 chrIV:599548-600437 6.92e-03 21_[+2(8.92e-05)]_53 chrV:461415-462260 2.27e-02 59_[+2(3.41e-05)]_15 chrVII:598824-601436 1.50e-01 100 chrXV:1027786-1029165 6.00e-02 100 chrXIII:753009-755016 9.74e-01 100 chrXV:903747-904723 2.28e-01 100 chrX:705178-705278 5.40e-01 100 chrVII:738884-739423 4.05e-15 28_[+1(1.42e-11)]_3_[-2(1.82e-11)]_\ 14 chrX:542773-542873 2.97e-05 7_[-1(8.34e-09)]_64 chrXII:656725-657186 2.63e-13 34_[+2(2.84e-09)]_3_[-3(3.07e-09)]_\ 8 chrXII:348070-348730 7.23e-01 100 chrII:680416-682195 2.39e-01 100 chrXIII:631739-634821 6.71e-01 100 chrXIV:493919-495636 7.65e-01 100 chrIV:1354564-1356025 9.19e-01 100 chrVII:648730-649418 6.35e-01 100 chrXI:617739-619286 9.68e-01 100 chrII:9369-9853 3.54e-11 31_[+1(9.77e-11)]_13_[-2(1.15e-07)]_\ 1 chrV:396172-397923 3.22e-01 100 chrIII:78283-78892 1.96e-01 100 chrXV:759049-759545 6.35e-01 100 chrIV:1201504-1202060 8.05e-16 26_[+1(3.32e-09)]_3_[-2(7.66e-10)]_\ 16 chrIV:1278646-1279024 7.06e-02 100 chrVII:555144-556690 4.86e-01 100 chrXI:24730-26364 7.67e-01 100 chrXI:258423-259510 8.46e-01 100 chrVIII:132817-133340 3.73e-13 3_[+2(1.93e-08)]_12_[-1(3.11e-12)]_\ 30 chrXIII:923430-924360 4.79e-01 100 chrVIII:103849-105906 1.37e-02 44_[-1(2.44e-05)]_27 chrXIII:504673-505183 2.13e-06 26_[+1(2.84e-10)]_45 chrIV:619715-620248 3.99e-06 43_[+2(1.11e-09)]_31 chrVIII:466756-467273 1.70e-05 65_[-2(1.46e-08)]_9 chrIV:1362042-1362610 6.91e-02 11_[+1(5.62e-05)]_60 chrVII:706670-707339 9.15e-01 100 chrX:227726-227826 1.61e-01 100 chrIV:340236-341683 3.00e-01 100 chrXII:522162-523275 2.22e-02 100 chrIV:359339-359830 1.99e-09 51_[+3(1.22e-08)]_20 chrXIII:290475-291150 1.04e-09 47_[+3(2.72e-12)]_24 chrIV:306689-310181 3.00e-01 100 chrVII:400796-401768 8.48e-01 100 chrIX:127463-128300 5.44e-01 100 chrXII:459636-459983 8.55e-01 100 chrXII:1028197-1028590 5.15e-01 100 chrVIII:381110-383380 7.45e-01 100 chrIV:1164948-1165252 7.64e-01 100 chrXV:113561-113963 5.09e-01 100 chrX:378050-378150 9.48e-01 100 chrIV:437517-438050 4.60e-08 47_[+1(3.11e-12)]_24 chrXI:551550-552376 9.93e-01 100 chrII:612275-614812 2.19e-01 100 chrVIII:374604-375831 8.10e-02 100 chrXIV:569686-570161 2.61e-07 28_[-1(1.42e-11)]_43 chrIV:1450255-1451261 3.01e-01 100 chrXIV:499242-501689 9.29e-01 100 chrX:523852-523952 4.31e-08 6_[-1(3.11e-12)]_65 chrVI:223256-224151 6.98e-01 100 chrXII:948874-953168 9.97e-01 100 chrXVI:828942-829378 6.29e-03 45_[-2(1.06e-06)]_29 chrVI:53247-55263 3.72e-01 100 chrVIII:388676-389213 7.28e-08 4_[+2(1.11e-09)]_34_[-3(2.19e-05)]_\ 7 chrXVI:819341-819824 3.83e-15 6_[+1(1.42e-11)]_3_[-2(1.82e-11)]_\ 36 chrXV:710017-710363 5.97e-02 68_[+1(2.37e-05)]_3 chrXI:230941-231638 4.63e-01 100 chrII:140139-140854 3.56e-01 100 chrV:99741-100322 9.96e-01 100 chrIV:1236498-1238493 8.04e-01 100 chrIII:315674-316616 7.63e-01 100 chrVIII:34484-36297 3.63e-01 100 chrIII:137245-138998 1.53e-01 100 chrXII:88221-88784 5.60e-01 100 chrXVI:188350-189165 1.82e-01 100 chrIV:591008-592210 6.87e-01 100 chrXV:54882-55413 2.94e-01 100 chrX:745244-745344 1.01e-04 35_[+3(2.01e-08)]_36 chrIV:992582-993092 2.35e-02 100 chrII:372889-376410 8.62e-01 100 chrXV:92122-94865 3.75e-01 100 chrXIII:861208-861536 7.30e-01 100 chrXIII:161942-164324 5.01e-01 100 chrXIV:559217-559880 2.02e-01 100 chrIV:1352337-1352748 8.78e-10 8_[-1(3.32e-09)]_63 chrXII:86852-87208 1.78e-01 100 chrVI:167259-167654 3.73e-05 41_[+1(8.34e-09)]_30 chrX:415777-415877 1.03e-01 100 chrVII:544406-546092 6.89e-01 100 chrXIV:575063-577378 2.84e-02 100 chrXVI:571970-572582 1.65e-01 100 chrIV:355252-357773 4.28e-01 100 chrXVI:453439-454075 2.94e-01 100 chrII:167643-169659 3.37e-01 100 chrXV:281735-282458 9.45e-01 100 chrII:165068-165547 3.03e-01 100 chrV:491083-491422 5.68e-03 33_[+2(3.19e-06)]_41 chrXVI:404552-407763 6.72e-01 100 chrV:438450-438988 5.05e-10 72_[-2(1.27e-11)]_2 chrVI:4457-5431 8.22e-02 100 chrIV:1461528-1462069 3.39e-06 42_[-1(2.84e-10)]_29 chrXI:219576-220084 4.04e-01 100 chrXVI:645247-646675 8.42e-01 100 chrXVI:40238-40740 8.38e-02 100 chrV:442997-443489 4.05e-15 14_[+2(1.82e-11)]_3_[-1(1.42e-11)]_\ 28 chrXIII:807726-808548 8.75e-01 100 chrVII:73685-74256 9.25e-01 100 chrXII:737655-738364 5.01e-02 100 chrVII:345799-346665 2.18e-01 100 chrXII:1051910-1052414 3.12e-01 100 chrIV:1016988-1017507 4.22e-15 15_[+2(2.28e-10)]_2_[-3(8.84e-12)]_\ 28 chrXV:967977-968466 5.98e-02 100 chrV:435031-436031 9.05e-01 100 chrXV:854017-854445 6.95e-16 11_[+2(5.88e-11)]_3_[-3(2.20e-08)]_\ 31 chrIV:1243118-1243335 2.50e-01 100 chrVII:23296-23639 1.34e-01 100 chrXIII:258985-259497 4.99e-08 10_[-1(3.11e-12)]_61 chrVII:483193-483880 6.35e-01 100 chrXIII:463313-463859 3.48e-13 26_[+3(3.18e-12)]_2_[-2(5.38e-08)]_\ 17 chrXIV:65139-65637 2.05e-01 100 chrII:226870-227390 3.73e-13 3_[+1(3.11e-12)]_12_[-2(1.93e-08)]_\ 30 chrIV:1401174-1403420 7.52e-01 100 chrV:77578-79386 8.77e-01 100 chrVII:310428-312390 2.35e-01 100 chrXV:424386-424669 6.69e-01 100 chrVII:364085-364453 9.83e-01 100 chrXVI:770167-771139 1.88e-01 100 chrIX:370216-370615 2.58e-08 60_[+3(2.72e-12)]_11 chrXV:505106-505516 5.09e-01 100 chrIV:1488800-1490587 8.13e-02 100 chrXI:382197-382474 7.17e-02 100 chrXII:6-289 2.49e-01 100 chrIV:721757-722139 8.09e-02 100 chrIV:555410-556698 7.27e-01 100 chrXII:921312-922617 6.18e-03 100 chrX:58918-59018 7.24e-10 13_[-1(3.36e-13)]_58 chrXVI:744046-744644 2.77e-04 28_[-2(1.07e-07)]_46 chrXVI:377930-378988 9.88e-01 100 chrXI:517765-518118 4.70e-01 100 chrXIII:91666-92115 1.47e-01 100 chrXV:464242-464741 3.09e-03 16_[+3(2.19e-05)]_55 chrV:152093-153281 6.22e-01 100 chrV:441795-442658 2.39e-01 100 chrXVI:66899-67498 7.51e-01 100 chrXIII:119213-119526 6.55e-01 100 chrVII:784686-785784 2.31e-01 100 chrIV:765263-765569 2.79e-01 100 chrVI:137256-137857 2.38e-08 14_[-1(5.52e-12)]_57 chrXIV:546938-547413 1.85e-07 39_[-2(1.11e-09)]_35 chrXVI:678836-679472 2.34e-01 100 chrIV:83262-83808 1.10e-01 100 chrXII:817882-820552 3.34e-01 100 chrIII:227708-228225 1.18e-08 34_[+1(8.34e-12)]_37 chrIV:519548-519952 7.21e-08 52_[+1(9.77e-11)]_19 chrXVI:172844-174096 6.81e-01 100 chrVI:269849-270157 7.08e-01 100 chrVII:736189-736542 1.08e-08 32_[+1(3.03e-05)]_3_[-2(3.47e-10)]_\ 10 chrIX:68182-69566 6.51e-01 100 chrXIII:362518-363298 9.79e-01 100 chrIV:1305405-1306091 8.61e-01 100 chrXIV:217275-217637 6.94e-01 100 chrI:71721-73610 7.54e-01 100 chrIV:488470-489201 9.35e-08 17_[+2(1.71e-10)]_57 chrVIII:296861-297252 7.25e-01 100 chrXII:673078-674569 7.21e-01 100 chrVII:702810-703607 5.13e-01 100 chrIV:946135-946602 1.03e-09 4_[+1(8.34e-09)]_17_[-2(5.83e-08)]_\ 24 chrXI:326087-327585 3.92e-01 100 chrVII:779400-779894 4.22e-13 27_[+3(9.19e-10)]_2_[-2(5.92e-10)]_\ 16 chrIV:155804-156312 1.79e-01 100 chrV:60901-62172 8.03e-01 100 chrXIV:560112-561139 9.68e-01 100 chrIII:162520-164135 9.75e-01 100 chrVI:82347-84400 4.08e-01 100 chrIV:32-384 3.52e-02 100 chrXII:975821-976242 6.09e-13 7_[+2(4.57e-08)]_3_[-1(5.52e-12)]_\ 35 chrVI:210431-210912 1.30e-09 3_[+2(5.83e-08)]_17_[-1(8.34e-09)]_\ 25 chrV:174746-174994 5.48e-01 100 chrVII:422877-423407 2.13e-06 9_[+1(2.84e-10)]_62 chrIV:644941-645400 2.36e-15 38_[+2(2.63e-10)]_2_[-3(6.10e-13)]_\ 5 chrIV:416309-417369 8.22e-01 100 chrVII:323399-324028 9.82e-01 100 chrIX:324174-324620 9.85e-01 100 chrX:233648-233748 1.10e-07 71_[+1(1.56e-09)] chrXII:710292-711199 2.15e-03 26_[+2(1.21e-05)]_48 chrXI:282553-284487 5.34e-01 100 chrVII:774123-774636 2.63e-13 28_[+3(3.07e-09)]_3_[-2(2.84e-09)]_\ 14 chrXI:142407-144252 7.39e-01 100 chrXIII:420316-420867 3.56e-09 52_[+2(1.27e-11)]_22 chrII:181306-181660 5.06e-01 100 chrIX:257353-258372 5.76e-01 100 chrVIII:85139-85510 5.05e-10 29_[+2(1.27e-11)]_45 chrXVI:214406-215992 7.20e-01 100 chrIII:28542-31174 9.24e-01 100 chrXIV:585347-586606 8.29e-01 100 chrIV:132639-133481 4.97e-01 100 chrVII:205299-205850 3.28e-05 6_[+1(6.20e-09)]_65 chrXI:46127-47009 6.54e-01 100 chrXI:578735-579293 9.40e-15 9_[+3(1.22e-08)]_26_[-2(1.10e-08)]_\ 10 chrXIV:351189-352952 7.93e-01 100 chrXIII:253238-253593 3.22e-01 100 chrVII:1004007-1004424 2.00e-01 100 chrIV:538949-539405 8.91e-01 100 chrXIII:913803-915659 4.55e-01 100 chrIV:129704-131015 9.84e-01 100 chrX:172677-172777 4.31e-01 100 chrXI:379442-379911 6.72e-02 100 chrXV:989027-989500 9.90e-02 100 chrXV:234231-234608 2.83e-02 51_[-2(2.09e-05)]_23 chrIV:449600-450009 9.55e-01 100 chrXIV:783435-784310 4.08e-06 30_[+3(2.16e-09)]_41 chrXIV:173973-174675 3.57e-03 10_[+1(5.33e-05)]_61 chrIV:229440-230725 5.67e-01 100 chrX:663405-663505 8.38e-01 100 chrIII:14414-15013 7.28e-01 100 chrXI:1-1025 6.13e-01 100 chrII:415505-415878 7.58e-01 100 chrXV:912057-912601 8.34e-01 100 chrXII:404040-404444 1.79e-01 100 chrIV:321619-321983 7.40e-01 100 chrXIII:556981-557629 1.97e-02 22_[+1(9.34e-05)]_49 chrXII:1071566-1071764 7.98e-01 100 chrXIII:675112-675367 1.44e-01 100 chrIII:123370-123835 6.83e-12 30_[+2(5.05e-15)]_44 chrV:250113-251440 6.82e-01 100 chrXV:407643-408213 9.72e-01 100 chrXVI:699908-700745 6.93e-01 100 chrXI:140769-141472 9.94e-01 100 chrXII:426892-427480 3.48e-13 4_[+3(3.18e-12)]_2_[-2(5.38e-08)]_\ 39 chrV:85037-86878 5.30e-01 100 chrXV:925191-925434 7.76e-01 100 chrVII:930787-931212 1.30e-07 9_[+2(1.71e-10)]_65 chrXII:567966-569467 8.03e-01 100 chrX:159920-160020 6.69e-01 100 chrIV:1434422-1434693 2.51e-01 100 chrIX:336127-336632 3.48e-13 25_[+2(5.38e-08)]_2_[-3(3.18e-12)]_\ 18 chrXV:340085-340580 5.39e-14 22_[+2(1.11e-09)]_3_[-1(1.56e-09)]_\ 20 chrVII:1050201-1050665 1.76e-01 100 chrXVI:768704-769503 9.82e-01 100 chrXV:228077-228567 2.43e-08 68_[+1(5.52e-12)]_3 chrXII:903389-903796 9.93e-01 100 chrVIII:517968-518740 9.88e-01 100 chrXV:300858-301359 3.09e-03 46_[+3(2.19e-05)]_25 chrII:36161-36581 6.34e-01 100 chrXII:636707-640145 4.58e-01 100 chrVII:472465-472769 4.20e-01 100 chrIV:490216-492599 7.67e-01 100 chrXVI:242620-243305 2.85e-01 100 chrXIV:738850-739766 6.21e-01 100 chrXVI:74967-76741 5.55e-02 100 chrVII:876171-876731 8.05e-16 1_[+1(3.32e-09)]_3_[-2(7.66e-10)]_\ 41 chrV:176834-177461 1.27e-15 10_[+3(2.72e-12)]_2_[-2(2.02e-09)]_\ 33 chrIII:68226-68641 9.12e-01 100 chrX:121287-121387 8.54e-01 100 chrII:544469-544854 1.96e-01 100 chrV:321897-323600 9.01e-01 100 chrVII:914832-915252 9.91e-01 100 chrIV:434067-434560 6.00e-16 6_[+2(1.60e-09)]_3_[-1(3.36e-13)]_\ 36 chrXI:430552-431683 6.17e-01 100 chrVIII:122096-122658 6.77e-01 100 chrI:6-1114 5.72e-02 100 chrV:6146-6590 7.86e-01 100 chrX:541318-541418 3.48e-13 21_[+3(3.18e-12)]_2_[-2(5.38e-08)]_\ 22 chrXI:490733-491238 5.39e-14 41_[+1(1.56e-09)]_3_[-2(1.11e-09)]_\ 1 chrVII:254117-254748 8.94e-01 100 chrVIII:48200-48589 4.25e-01 100 chrVII:440526-442090 8.59e-01 100 chrXII:605122-605635 2.59e-05 66_[-3(9.15e-06)]_5 chrVII:919828-920211 4.41e-01 100 chrXI:108736-110150 2.17e-01 100 chrII:326617-327112 1.47e-02 100 chrXIII:372215-372709 5.05e-10 38_[+2(1.27e-11)]_36 chrI:138924-139367 3.09e-03 64_[+3(2.19e-05)]_7 chrIV:1256853-1257299 8.58e-05 15_[-3(1.91e-08)]_56 chrXI:83951-84465 1.38e-07 59_[+1(9.77e-11)]_12 chrX:90023-90123 5.97e-01 100 chrX:293875-293975 7.39e-01 100 chrX:422675-422775 8.99e-11 1_[+1(3.17e-08)]_3_[-2(1.10e-08)]_\ 41 chrI:229461-230191 9.66e-01 100 chrXIII:183780-184205 9.22e-01 100 chrXIV:104568-105090 6.00e-16 34_[+1(3.36e-13)]_3_[-2(1.60e-09)]_\ 8 chrIV:541238-542144 2.74e-01 100 chrX:204510-204610 3.48e-13 37_[+3(3.18e-12)]_2_[-2(5.38e-08)]_\ 6 chrI:81855-82296 1.36e-01 100 chrXIV:96024-96611 4.42e-06 7_[-3(9.19e-10)]_64 chrXV:159267-161436 5.26e-01 100 chrX:424292-424392 9.87e-08 15_[-1(9.77e-11)]_56 chrXII:1017838-1019428 5.39e-01 100 chrXIV:619447-620104 8.85e-01 100 chrXVI:431402-434375 6.82e-01 100 chrXI:458366-458999 1.20e-04 6_[-2(9.21e-05)]_31_[-3(7.90e-07)]_\ 8 chrXV:305016-305566 6.09e-01 100 chrX:291061-291161 4.15e-01 100 chrIX:2-244 8.94e-01 100 chrXII:65421-65716 3.83e-01 100 chrIV:802565-803020 2.38e-09 22_[-3(6.10e-13)]_49 chrXII:374203-374608 5.39e-14 8_[+1(1.56e-09)]_3_[-2(1.11e-09)]_\ 34 chrII:159817-160045 8.85e-01 100 chrIX:325510-326068 6.00e-16 17_[+1(3.36e-13)]_3_[-2(1.60e-09)]_\ 25 chrIV:1300464-1301359 2.22e-01 100 chrXV:841734-842960 3.71e-01 100 chrX:414789-414889 8.05e-16 1_[+1(3.32e-09)]_3_[-2(7.66e-10)]_\ 41 chrXIII:408509-408789 1.09e-02 25_[+2(1.51e-05)]_49 chrXV:232004-232385 7.86e-01 100 chrXI:158170-159311 5.81e-01 100 chrXIII:761548-763263 4.08e-01 100 chrIII:142051-143015 6.62e-01 100 chrXIII:731970-733523 8.77e-01 100 chrVIII:125880-127482 3.55e-01 100 chrXIII:219248-221204 7.83e-01 100 chrXII:498286-499907 6.80e-01 100 chrXIII:872669-872977 6.51e-02 100 chrXVI:280562-282977 7.66e-01 100 chrXVI:352128-352685 8.57e-01 100 chrXIII:880406-880950 8.53e-01 100 chrVII:364876-366723 7.74e-01 100 chrVII:794168-794584 8.44e-01 100 chrVII:700200-701258 9.31e-08 5_[+1(7.11e-07)]_11_[-2(4.57e-08)]_\ 29 chrXIII:168590-169033 3.73e-05 44_[+1(8.34e-09)]_27 chrXVI:860112-860636 2.17e-01 100 chrVI:191294-191814 6.51e-09 14_[+2(4.33e-07)]_31_[-1(1.03e-08)] chrIX:174819-175237 7.65e-10 61_[+1(3.36e-13)]_10 chrXV:259260-259888 9.99e-01 100 chrIV:1524238-1525672 8.22e-01 100 chrXIII:767939-768648 1.00e+00 100 chrX:531577-531677 4.56e-08 57_[-2(1.71e-10)]_17 chrXIV:725963-726409 3.54e-11 3_[+2(1.15e-07)]_13_[-1(9.77e-11)]_\ 29 chrXIII:540351-540856 2.84e-02 100 chrIV:1150623-1151187 1.73e-02 48_[-1(3.47e-05)]_23 chrIV:520396-521413 6.49e-01 100 chrX:702318-702418 7.74e-01 100 chrVII:479533-482967 6.18e-01 100 chrVII:845393-845933 1.30e-07 74_[-2(1.71e-10)] chrXII:932057-932542 9.16e-01 100 chrIX:254225-254578 2.44e-01 100 chrXV:384768-385002 3.09e-01 100 chrXI:518719-519368 1.93e-03 39_[+1(3.18e-06)]_32 chrXIV:301066-303846 9.99e-01 100 chrV:469241-469886 9.34e-01 100 chrVI:204786-205200 5.62e-08 15_[-3(3.07e-09)]_56 chrXV:1003919-1004934 9.99e-01 100 chrVII:771905-772942 9.72e-01 100 chrVII:730936-731409 2.59e-13 24_[+1(5.52e-12)]_3_[-2(4.57e-08)]_\ 18 chrXII:241575-243457 9.86e-01 100 chrVI:226507-226932 8.05e-16 24_[+2(7.66e-10)]_3_[-1(3.32e-09)]_\ 18 chrXIV:229450-230728 8.17e-01 100 chrXII:809149-810394 8.00e-01 100 chrXII:645830-646224 7.48e-03 17_[-3(4.33e-05)]_54 chrII:604083-607143 1.75e-01 100 chrI:141134-143695 7.60e-01 100 chrXVI:425243-425450 5.82e-01 100 chrXI:67744-68391 2.67e-01 100 chrVIII:455588-455875 2.96e-01 100 chrVII:828463-828985 2.50e-08 54_[+2(3.47e-10)]_20 chrXV:987554-987832 7.95e-01 100 chrIV:568672-569257 3.26e-16 7_[-2(3.47e-10)]_25_[+3(3.18e-12)]_\ 13 chrXIV:6495-7170 2.99e-05 51_[-3(8.36e-09)]_20 chrXII:855491-857631 6.48e-01 100 chrVII:287070-287765 5.58e-02 100 chrVIII:146022-146448 4.81e-05 62_[+2(2.84e-09)]_12 chrXVI:701856-702307 1.00e+00 100 chrXV:353893-354328 5.65e-10 15_[-1(3.36e-13)]_56 chrXIII:886542-888342 3.66e-01 100 chrV:302279-303578 2.63e-01 100 chrXV:27838-28111 4.64e-02 69_[-1(7.15e-05)]_2 chrII:255116-257157 1.22e-02 100 chrX:390847-390947 8.99e-11 21_[+2(1.10e-08)]_3_[-1(3.17e-08)]_\ 21 chrIV:411216-411678 6.31e-01 100 chrV:207135-207616 3.95e-10 40_[+3(3.48e-10)]_2_[-2(2.63e-07)]_\ 3 chrXVI:581807-582280 5.84e-01 100 chrIX:138125-139395 7.00e-01 100 chrX:396570-396670 1.30e-07 1_[+2(1.71e-10)]_73 chrXII:167746-168260 2.73e-08 34_[-1(3.11e-12)]_37 chrV:487116-487657 1.27e-15 [+2(2.02e-09)]_2_[-3(2.72e-12)]_43 chrVII:561400-561954 4.06e-05 40_[+2(1.93e-08)]_34 chrXII:198242-199732 4.22e-01 100 chrVII:110416-110936 3.95e-10 4_[+2(2.63e-07)]_2_[-3(3.48e-10)]_\ 39 chrXV:444605-446249 1.48e-02 100 chrIX:210515-210944 3.00e-07 27_[-2(1.82e-11)]_47 chrXVI:576112-576370 9.73e-01 100 chrXVI:689351-689880 6.98e-14 8_[+1(1.37e-13)]_12_[-2(9.97e-08)]_\ 25 chrIII:82373-82817 9.58e-01 100 chrVII:608996-610249 5.23e-01 100 chrIV:893980-894292 2.39e-01 100 chrX:354005-354105 3.60e-05 61_[+1(8.34e-09)]_10 chrXIV:602099-602542 3.26e-07 51_[+1(1.42e-11)]_20 chrV:430971-431576 1.84e-01 100 chrVII:533814-535222 9.99e-01 100 chrVIII:74893-75909 1.97e-01 100 chrIII:177063-179272 9.57e-01 100 chrIV:974118-974673 4.38e-01 100 chrX:374202-374302 1.14e-08 36_[+2(3.47e-10)]_3_[-1(3.03e-05)]_\ 6 chrV:434387-434774 3.27e-10 16_[+2(2.63e-07)]_2_[-3(3.48e-10)]_\ 27 chrXIV:102498-102968 6.09e-13 42_[+1(5.52e-12)]_3_[-2(4.57e-08)] chrVII:726388-728072 2.90e-01 100 chrV:407138-410030 7.45e-01 100 chrIX:183282-183714 2.61e-07 26_[-1(1.42e-11)]_45 chrVII:938977-939744 9.85e-01 100 chrXI:313167-313675 3.95e-10 35_[+2(2.63e-07)]_2_[-3(3.48e-10)]_\ 8 chrXVI:97720-99122 4.12e-01 100 chrIV:331263-332624 7.65e-01 100 chrXI:74375-74982 4.45e-13 5_[+1(5.52e-12)]_3_[-2(4.57e-08)]_\ 37 chrXII:262853-263951 4.27e-01 100 chrII:332287-333809 1.76e-01 100 chrII:443890-445129 5.50e-01 100 chrXV:1025700-1026085 1.34e-01 100 chrXIII:296308-298945 1.00e+00 100 chrXI:463459-463819 8.14e-01 100 chrIV:1080274-1081008 7.30e-01 100 chrXIII:267630-268378 9.22e-01 100 chrXII:201655-202998 4.18e-01 100 chrXII:784151-784576 5.88e-03 49_[+1(3.47e-05)]_22 chrVII:576465-577446 6.15e-01 100 chrXIII:572675-573258 1.41e-05 1_[-1(3.17e-08)]_70 chrVII:405293-405739 8.29e-09 11_[+1(3.03e-05)]_3_[-2(3.47e-10)]_\ 31 chrXI:307968-308456 6.70e-02 100 chrXV:80342-83544 4.07e-01 100 chrIV:980736-981262 2.14e-13 30_[+2(1.93e-08)]_12_[-1(3.11e-12)]_\ 3 chrXV:438446-439452 9.10e-02 16_[-3(9.51e-05)]_55 chrIII:228704-229136 5.61e-01 100 chrVIII:475518-475901 3.84e-06 52_[+2(2.28e-10)]_22 chrI:68286-68852 1.46e-01 100 chrXI:322420-322675 3.49e-01 100 chrVI:180647-181266 5.02e-07 73_[+2(1.71e-10)]_1 chrV:225157-225715 6.43e-01 100 chrXIV:505935-506680 1.91e-01 100 chrXIII:378892-379629 6.50e-02 57_[+1(5.47e-05)]_14 chrVI:63982-65381 7.88e-01 100 chrXV:487223-487688 2.38e-08 43_[+1(5.52e-12)]_28 chrXI:355327-356473 9.40e-02 100 chrXII:628114-628642 3.98e-06 64_[+1(2.84e-10)]_7 chrVIII:16765-17269 2.64e-01 100 chrXII:781032-781898 7.24e-01 100 chrX:68975-69075 3.21e-01 100 chrXV:252846-254685 6.13e-01 100 chrII:644953-645427 1.27e-15 35_[+3(2.72e-12)]_2_[-2(2.02e-09)]_\ 8 chrIV:116341-118232 2.37e-01 100 chrI:180932-181469 4.29e-08 [+1(2.84e-10)]_43_[-2(9.21e-05)]_2 chrXI:533743-534284 7.60e-01 100 chrV:138428-141517 6.04e-01 100 chrIII:168914-169259 9.48e-01 100 chrII:88931-90014 5.24e-01 100 chrII:197229-197877 4.05e-15 [+1(1.42e-11)]_3_[-2(1.82e-11)]_42 chrXII:728154-728715 4.07e-02 100 chrXII:47671-49162 7.57e-01 100 chrXIV:62014-64579 5.98e-01 100 chrX:454298-454398 3.99e-01 100 chrV:130829-131399 2.19e-15 23_[+2(4.55e-10)]_2_[-3(6.10e-13)]_\ 20 chrXII:366014-366576 6.50e-01 100 chrVII:541615-542178 1.27e-15 12_[+3(2.72e-12)]_2_[-2(2.02e-09)]_\ 31 chrIV:216575-218073 2.65e-01 100 chrXV:663547-664103 3.58e-10 42_[+2(1.27e-11)]_32 chrXIII:23745-26401 7.42e-01 100 chrXV:380617-381201 4.75e-01 100 chrVIII:134057-134625 2.36e-15 38_[+3(6.10e-13)]_2_[-2(2.63e-10)]_\ 5 chrII:347401-347892 3.54e-11 16_[+1(9.77e-11)]_13_[-2(1.15e-07)]_\ 16 chrXI:614168-614424 1.93e-02 67_[+1(9.34e-05)]_4 chrXV:167751-168522 9.58e-01 100 chrX:348826-348926 6.41e-01 100 chrXIV:715439-716623 9.06e-01 100 chrIII:6-1310 5.60e-01 100 chrXIII:145849-147207 6.69e-01 100 chrIV:221084-222362 3.69e-01 100 chrIV:234149-234787 8.30e-01 100 chrIII:168110-168600 2.36e-15 1_[+2(2.63e-10)]_2_[-3(6.10e-13)]_\ 42 chrXV:216227-216745 4.76e-01 100 chrVI:95440-95901 3.05e-01 100 chrV:288170-288780 6.98e-14 23_[+2(9.97e-08)]_12_[-1(1.37e-13)]_\ 10 chrV:492194-492573 5.39e-14 24_[+2(1.11e-09)]_3_[-1(1.56e-09)]_\ 18 chrXIV:567878-568517 4.93e-06 38_[-2(1.11e-09)]_36 chrX:355135-355235 3.41e-08 28_[-2(3.47e-10)]_46 chrV:551123-551588 2.74e-07 14_[-1(1.42e-11)]_57 chrXVI:653823-655016 9.90e-01 100 chrII:592314-593283 7.14e-01 100 chrI:182334-182790 3.73e-13 15_[+2(1.93e-08)]_12_[-1(3.11e-12)]_\ 18 chrXII:649078-651366 5.67e-02 100 chrXI:93762-94112 4.22e-01 100 chrXIII:306039-307044 4.22e-01 100 chrXIV:374683-375097 3.66e-07 37_[+1(2.20e-09)]_34 chrV:362148-363291 8.36e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************