******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--CIN5/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrI:4-1131 1.0000 100 chrI:28314-29063 1.0000 100 chrI:71749-74244 1.0000 100 chrI:81902-82279 1.0000 100 chrI:138886-139356 1.0000 100 chrI:141585-141940 1.0000 100 chrI:166032-166588 1.0000 100 chrI:180906-181454 1.0000 100 chrI:182340-182792 1.0000 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chrXV:438453-438976 1.0000 100 chrXV:464243-464776 1.0000 100 chrXV:487220-487713 1.0000 100 chrXV:505098-505477 1.0000 100 chrXV:571515-572217 1.0000 100 chrXV:594231-594697 1.0000 100 chrXV:663478-664112 1.0000 100 chrXV:671109-671433 1.0000 100 chrXV:677931-679198 1.0000 100 chrXV:710006-710475 1.0000 100 chrXV:779698-780980 1.0000 100 chrXV:796974-797476 1.0000 100 chrXV:842365-843039 1.0000 100 chrXV:854013-854449 1.0000 100 chrXV:866529-868156 1.0000 100 chrXV:882112-882466 1.0000 100 chrXV:892244-892597 1.0000 100 chrXV:903662-905110 1.0000 100 chrXV:911869-912583 1.0000 100 chrXV:925199-925429 1.0000 100 chrXV:968129-968427 1.0000 100 chrXV:976182-976904 1.0000 100 chrXV:978820-980006 1.0000 100 chrXV:980465-981131 1.0000 100 chrXV:1003916-1004951 1.0000 100 chrXV:1025705-1026084 1.0000 100 chrXV:1027466-1029290 1.0000 100 chrXV:1053857-1054530 1.0000 100 chrXVI:16957-17263 1.0000 100 chrXVI:55846-56527 1.0000 100 chrXVI:75432-76749 1.0000 100 chrXVI:135530-135836 1.0000 100 chrXVI:188510-188964 1.0000 100 chrXVI:209646-210586 1.0000 100 chrXVI:214904-215932 1.0000 100 chrXVI:239154-239564 1.0000 100 chrXVI:280573-281903 1.0000 100 chrXVI:302628-304265 1.0000 100 chrXVI:338647-339146 1.0000 100 chrXVI:378659-379019 1.0000 100 chrXVI:406193-407789 1.0000 100 chrXVI:431758-432105 1.0000 100 chrXVI:435636-436374 1.0000 100 chrXVI:520131-520525 1.0000 100 chrXVI:560016-560529 1.0000 100 chrXVI:572010-572564 1.0000 100 chrXVI:581810-582330 1.0000 100 chrXVI:590995-591356 1.0000 100 chrXVI:608212-608610 1.0000 100 chrXVI:622327-622871 1.0000 100 chrXVI:641212-641482 1.0000 100 chrXVI:678881-679441 1.0000 100 chrXVI:689359-689885 1.0000 100 chrXVI:699897-700717 1.0000 100 chrXVI:731621-732310 1.0000 100 chrXVI:744045-744667 1.0000 100 chrXVI:768939-769513 1.0000 100 chrXVI:775659-776177 1.0000 100 chrXVI:785320-785990 1.0000 100 chrXVI:789642-789983 1.0000 100 chrXVI:794463-796078 1.0000 100 chrXVI:810452-810890 1.0000 100 chrXVI:819309-819857 1.0000 100 chrXVI:856440-857155 1.0000 100 chrXVI:860151-860639 1.0000 100 chrXVI:880118-880587 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--CIN5/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--CIN5/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--CIN5/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 583 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 58300 N= 583 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.298 C 0.202 G 0.202 T 0.298 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--CIN5/background): A 0.313 C 0.187 G 0.187 T 0.313 ******************************************************************************** ******************************************************************************** MOTIF DRAGRTCCBSGGTTCGATYCCSVK MEME-1 width = 24 sites = 115 llr = 2035 E-value = 2.8e-432 ******************************************************************************** -------------------------------------------------------------------------------- Motif DRAGRTCCBSGGTTCGATYCCSVK MEME-1 Description -------------------------------------------------------------------------------- Simplified A 346242:3:12::::3a2:::13: pos.-specific C 1111:17544::::a::24a7531 probability G 44376::2358a:::7:1:::445 matrix T 21:::62:31::aa:::56:21:3 bits 2.4 * * 2.2 * * * 1.9 * * * 1.7 * ** * * Relative 1.4 **** * * Entropy 1.2 * * ******* ** (25.5 bits) 1.0 ** * ******* *** 0.7 *** ** ******** ****** 0.5 *************** ****** 0.2 ************************ 0.0 ------------------------ Multilevel GAAGGTCCCGGGTTCGATTCCCGG consensus AGG AATATC A C TGCT sequence T G A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DRAGRTCCBSGGTTCGATYCCSVK MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------ chrXIV:631568-632135 - 53 9.61e-15 TTAGGGTGCG GGAGGTCCCGGGTTCGAGTCCCGG CTCGCCCCCA chrIII:123365-123805 - 50 9.61e-15 TTAGGGTGCG GGAGGTCCCGGGTTCGAGTCCCGG CTCGCCCCAC chrXVI:860151-860639 + 73 1.68e-11 GTTGCCATCG TTGGGCCCCCGGTTCGATTCCGGG CTTG chrXVI:572010-572564 + 71 1.68e-11 GTTGCCATCG TTGGGCCCCCGGTTCGATTCCGGG CTTGCG chrXV:281875-282527 + 52 1.68e-11 GTTGCCATCG TTGGGCCCCCGGTTCGATTCCGGG CTTGCGCATT chrXV:226411-226899 - 14 1.68e-11 GTTGCCATCG TTGGGCCCCCGGTTCGATTCCGGG CTTGCGCAAA chrXIII:183646-184184 - 41 1.68e-11 GTTGCCATCG TTGGGCCCCCGGTTCGATTCCGGG CTTGCGCATA chrX:531567-532201 + 33 1.68e-11 GTTGCCATCG TTGGGCCCCCGGTTCGATTCCGGG CTTGCGCAGT chrVII:930760-931223 - 20 1.68e-11 GTTGCCATCG TTGGGCCCCCGGTTCGATTCCGGG CTTGCGCATT chrVII:845424-845908 + 72 1.68e-11 GTTGCCATCG TTGGGCCCCCGGTTCGATTCCGGG CTTGC chrVI:180670-181274 - 60 1.68e-11 GTTGCCATCG TTGGGCCCCCGGTTCGATTCCGGG CTTGCGCAGT chrXV:854013-854449 - 14 2.82e-11 CTTGCAAGGA AGAGGTCATCGGTTCGATTCCGGT TGCGTCCAAT chrXII:214659-215163 - 30 2.82e-11 CTTGCAAGGA AGAGGTCATCGGTTCGATTCCGGT TGCGTCCATT chrV:311756-312290 - 58 2.82e-11 CTTGCAAGGA AGAGGTCATCGGTTCGATTCCGGT TGCGTCCAAT chrI:166032-166588 + 48 2.82e-11 CTTGCAAGGA AGAGGTCATCGGTTCGATTCCGGT TGCGTCCAAA chrXVI:819309-819857 + 38 3.32e-11 CTAATAACGC GGGGATCAGCGGTTCGATCCCGCT AGAGACCATT chrXIV:569665-570151 - 17 3.32e-11 CTAATAACGC GGGGATCAGCGGTTCGATCCCGCT AGAGACCATT chrIV:667734-668257 - 70 3.32e-11 ATAACGC GGGGATCAGCGGTTCGATCCCGCT AGAGACCATT chrII:197226-197882 + 32 3.32e-11 CTAATAACGC GGGGATCAGCGGTTCGATCCCGCT AGAGACCATT chrVIII:134057-134628 + 69 5.39e-11 GTTTTGATCC GGACAACCCCGGTTCGAATCCGGG TAGGACCT chrIV:802532-803025 - 11 5.39e-11 GTTTTGATCC GGACAACCCCGGTTCGAATCCGGG TAGGACCTCT chrIV:644944-645399 - 40 5.39e-11 GTTTTGATCC GGACAACCCCGGTTCGAATCCGGG TAGGACCTTT chrIV:520712-521293 + 60 5.39e-11 GTTTTGATCC GGACAACCCCGGTTCGAATCCGGG TAGGACCTTT chrII:350546-351156 + 66 5.39e-11 GTTTTGATCC GGACAACCCCGGTTCGAATCCGGG TAAGACCTTA chrXV:980465-981131 + 8 7.36e-11 GCATGCG AGAGGCCCTGGGTTCAATTCCCAG CTCGCCCCTT chrXV:464243-464776 + 61 7.36e-11 AAAGCATGCG AGAGGCCCTGGGTTCAATTCCCAG CTCGCCCCTT chrXIV:567893-568493 + 43 7.36e-11 AAAGCATGCG AGAGGCCCTGGGTTCAATTCCCAG CTCGCCCCTT chrXIV:546943-547416 + 36 7.36e-11 AAAGCATGCG AGAGGCCCTGGGTTCAATTCCCAG CTCGCCCCGT chrXII:92309-92907 + 61 7.36e-11 AAAGCATGCG AGAGGCCCTGGGTTCAATTCCCAG CTCGCCCCTT chrVIII:388661-389215 - 13 7.36e-11 AAAGCATGCG AGAGGCCCTGGGTTCAATTCCCAG CTCGCCCCAT chrV:130822-131434 - 12 8.58e-11 GTTTTGATCC GAACAACCCCGGTTCGAATCCGGG TAAGACCTAT chrXIII:290528-291164 + 45 1.16e-10 GCTTTCACCG TGGAGACCGGGGTTCGACTCCCCG TAGCGGAGTT chrVII:541618-542179 + 42 1.16e-10 GCTTTCACCG TGGAGACCGGGGTTCGACTCCCCG TATCGGAGTG chrVII:401335-401778 - 29 1.16e-10 GCTTTCACCG TGGAGACCGGGGTTCGACTCCCCG TATCGGAGTA chrV:487075-487642 - 31 1.16e-10 GCTTTCACCG TGGAGACCGGGGTTCGACTCCCCG TATCGGAGTA chrV:176887-177455 + 18 1.16e-10 GCTTTCACCG TGGAGACCGGGGTTCGACTCCCCG TATCGGAGTA chrIV:1016963-1017513 - 27 1.16e-10 GTTCTCACCG TGGAGACCGGGGTTCGACTCCCCG CTTCGGAGTT chrXV:663478-664112 - 75 1.34e-10 CA GAACGTCCCCAGTTCGATCCTGGG CGAAATCGTT chrXIII:586394-586931 - 32 1.34e-10 TTAACACGCA GAACGTCCCCAGTTCGATCCTGGG CGAAATCATT chrXIII:420312-420897 - 42 1.34e-10 TTAACACGCA GAACGTCCCCAGTTCGATCCTGGG CGAAATCATT chrXIII:372185-372728 - 47 1.34e-10 TTAACACGCA GAACGTCCCCAGTTCGATCCTGGG CGAAATCATT chrXII:687657-688162 - 8 1.34e-10 TTAACACGCA GAACGTCCCCAGTTCGATCCTGGG CGAAATC chrVIII:85107-85569 - 18 1.34e-10 TTAACACGCA GAACGTCCCCAGTTCGATCCTGGG CGAAATCAAT chrVII:412104-412591 - 5 1.34e-10 TTAACACGCA GAACGTCCCCAGTTCGATCCTGGG CGAA chrV:469236-469848 + 7 1.34e-10 CACGCA GAACGTCCCCAGTTCGATCCTGGG CGAAATCATT chrIV:488430-489145 - 68 1.34e-10 TTACACGGC GAAGATCCCGAGTTCGAACCTCGG TTGGATCAGA chrVII:779392-779913 + 54 3.56e-10 CCTTCCAAGG TGGGGACACGGGTTCGATTCTCGT ACCGCTCAAG chrXIII:480354-480924 - 40 6.81e-10 CTCTTAATCA TAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTTC chrXI:202819-203324 + 19 6.81e-10 CTCTTAATCA TAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTTT chrX:414778-415250 + 43 6.81e-10 CTCTTAATCA TAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTAA chrVII:876185-876775 + 5 6.81e-10 ATCA TAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTTT chrVII:185389-186062 - 47 6.81e-10 CTCTTAATCA TAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTAT chrVII:122061-122576 + 42 6.81e-10 CTCTTAATCA TAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTAT chrV:135145-135698 - 62 6.81e-10 CTCTTAATCA TAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTTT chrXIII:131612-132115 - 20 1.11e-09 CTTCTAATCA GAAGATTATGGGTTCGACCCCCAT CGTGAGTGCT chrXI:162258-162766 - 33 1.11e-09 CTTCTAATCA GAAGATTATGGGTTCGACCCCCAT CGTGAGTGTT chrX:374193-374828 - 54 1.11e-09 CTTCTAATCA GAAGATTATGGGTTCGACCCCCAT CGTGAGTGCT chrX:355139-355732 + 29 1.11e-09 CTTCTAATCA GAAGATTATGGGTTCGACCCCCAT CGTGAGTGCT chrVII:828465-828986 - 56 1.11e-09 CTTCTAATCA GAAGATTATGGGTTCGACCCCCAT CGTGAGTGCT chrVII:736190-736551 + 60 1.11e-09 CTTCTAATCA GAAGATTATGGGTTCGACCCCCAT CGTGAGTGTT chrVII:405272-405798 + 25 1.11e-09 CTTCTAATCA GAAGATTATGGGTTCGACCCCCAT CGTGAGTGCT chrX:233660-234304 + 48 1.59e-09 CTACGAACCA GGAGATTCCAGGTTCGAGTCCTGG CGGGGAAGAA chrXIII:768188-768629 - 19 1.79e-09 TTAGCATGGG AGAGGTCTCCGGTTCGATTCCGGA CTCGTCCAAA chrXIII:320937-321325 - 74 1.79e-09 GGG AGAGGTCTCCGGTTCGATTCCGGA CTCGTCCATT chrXII:656688-657212 - 42 1.79e-09 TTAGCATGGG AGAGGTCTCCGGTTCGATTCCGGA CTCGTCCAAG chrIV:410173-410665 + 51 1.79e-09 TTAGCATGGG AGAGGTCTCCGGTTCGATTCCGGA CTCGTCCAAA chrXIV:104578-105116 + 49 2.51e-09 CTAGTAATGT GGAGATCATCGGTTCAAATCCGAT TGGAAGCATA chrX:58725-59442 - 75 2.51e-09 GT GGAGATCATCGGTTCAAATCCGAT TGGAAGCATA chrIX:325517-326110 + 26 2.51e-09 CTAGTAATGT GGAGATCATCGGTTCAAATCCGAT TGGAAGCAAT chrIV:434013-434557 - 37 2.51e-09 CTAGTAATGT GGAGATCATCGGTTCAAATCCGAT TGGAAGCATA chrXVI:768939-769513 - 39 3.13e-09 AAGGATACCG AAATGTCAGGGGTTCGAGCCCCCT ATGAGGAGTT chrXV:438453-438976 + 43 3.13e-09 AAGGATACCG AAATGTCAGGGGTTCGAGCCCCCT ATGAGGAGTT chrXI:578730-579330 + 49 3.13e-09 AAGGATACCG AAATGTCAGGGGTTCGAGCCCCCT ATGAGGAGTT chrXII:374203-374637 + 26 8.88e-09 CTACGAACCA GAAGATTCCAGGTTCAAGTCCTGG CGGGGAAGAT chrXI:490735-491292 + 46 8.88e-09 CTACGAACCA GAAGATTCCAGGTTCAAGTCCTGG CGGGGAAGAA chrIV:619646-620265 - 72 8.88e-09 AACCA GAAGATTCCAGGTTCAAGTCCTGG CGGGGAAGAT chrVIII:358263-358783 - 13 1.58e-08 CAAGTTATCT GGAGGTCCTGTGTTCGATCCACAG AATTCGCATA chrIV:1095137-1095677 - 21 1.58e-08 CAAGATATCT GGAGGTCCTGTGTTCGATCCACAG AGTTCGCATT chrXIII:463306-463902 + 40 2.50e-08 CTTGTCGCGT GCCAGATCGGGGTTCAATTCCCCG TCGCGGAGAT chrXII:426897-427479 + 34 2.50e-08 CTTGTCGCGT GCCAGATCGGGGTTCAATTCCCCG TCGCGGAGAA chrX:541317-541825 + 27 2.50e-08 CTTGTCGCGT GCCAGATCGGGGTTCAATTCCCCG TCGCGGAGAT chrIX:336125-336651 - 19 2.50e-08 CTTGTCGCGT GCCAGATCGGGGTTCAATTCCCCG TCGCGGAGAT chrIV:568680-569319 + 55 2.50e-08 CTTGTCGCGT GCCAGATCGGGGTTCAATTCCCCG TCGCGGAGAA chrII:405627-406360 + 57 2.50e-08 CTTGTCGCGT GCCAGATCGGGGTTCAATTCCCCG TCGCGGAGAT chrXVI:55846-56527 - 41 4.58e-08 ATTGCAATCG AAGGGTTGCAGGTTCAATTCCTGT CCGTTTCAAT chrXIII:378952-379621 - 75 4.58e-08 CG AAGGGTTGCAGGTTCAATTCCTGT CCGTTTCAAT chrXI:302502-303473 + 55 4.58e-08 ATTGCAATCG AAGGGTTGCAGGTTCAATTCCTGT CCGTTTCATT chrVIII:466766-467277 + 59 4.58e-08 CTTGTAATGC AAAGGTCGCTAGTTCAATTCTGGC AGGTGGCATT chrVII:287094-287688 - 17 4.58e-08 ATTGCAATCG AAGGGTTGCAGGTTCAATTCCTGT CCGTTTCATT chrX:422646-423282 + 64 5.41e-08 CTCATAATCT GAAGGTCGAGAGTTCGAACCTCCC CTGGAGCACA chrX:390837-391327 - 19 5.41e-08 CTCATAATCT GAAGGTCGAGAGTTCGAACCTCCC CTGGAGCATA chrXIII:362821-363354 + 67 1.19e-07 GTTGTGGCCG ATGAAACCCTGGTTCGATTCTAGG AGATGGCATT chrXI:313163-313684 - 36 1.19e-07 GTTGTGGCCG ATGAAACCCTGGTTCGATTCTAGG AGATGGCATT chrVII:700154-701269 + 64 1.19e-07 CTGATCTCTT CGGAGGCGCGGGTTCAAACCCCGC GGGTATCAAT chrVII:319576-320136 + 15 1.19e-07 GTTGTGGCCG ATGAAACCCTGGTTCGATTCTAGG AGATGGCATT chrVII:110408-110935 - 12 1.19e-07 GTTGTGGCCG ATGAAACCCTGGTTCGATTCTAGG AGATGGCAAT chrV:434385-434776 - 19 1.19e-07 GTTGTGGCCG ATGAAACCCTGGTTCGATTCTAGG AGATGGCATT chrV:206932-207902 + 30 1.19e-07 GTTGTGGCCG ATGAAACCCTGGTTCGATTCTAGG AGATGGCATA chrXV:487220-487713 + 65 1.28e-07 CTGTTAATCG CAAGATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrXV:228106-228625 + 58 1.28e-07 CTGTTAATCG CAAGATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrXIV:632396-632901 + 43 1.28e-07 CTGTTAATCG CAAGATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrXIV:102484-103022 + 55 1.28e-07 CTGTTAATCG CAAGATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrXII:975763-976245 - 37 1.28e-07 CTGTTAATCG CAAGATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrXI:74358-75002 + 36 1.28e-07 CTGTTAATCG CAAGATCGTGAGTTCAACCCTCAC TGGGGTCGCT chrVII:730940-731412 + 53 1.28e-07 CTGTTAATCG CAAGATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrXVI:744045-744667 + 18 1.73e-07 CTTGTAATGC AAAGGTCGTTAGTTCAATTCTGAC AGGTGGCAAA chrXIV:725903-726422 + 24 1.86e-07 AAAAATACTG AAGGATGCGAGGTTCGAACTCGCG CGGACAACCG chrVII:706898-707345 - 45 1.86e-07 TTGCAAATCT GTTGGTCCTTAGTTCGATCCTGAG TGCGAGCTTT chrII:347402-347914 - 53 1.86e-07 AATATTACTG AAGGATGCGAGGTTCGAACTCGCG CGGACAACCG chrII:9368-9961 - 27 1.86e-07 AAAAATACTG AAGGATGCGAGGTTCGAACTCGCG CGGACAACCG chrXIII:837702-838259 + 55 2.30e-07 TACGAAATCT TGAGATCGGGCGTTCGACTCGCCC CCGGGAGATA chrIV:946124-946617 + 49 2.30e-07 TACGAAATCT TGAGATCGGGCGTTCGACTCGCCC CCGGGAGATT chrXVI:338647-339146 - 10 3.95e-07 CTCATAACCC TGATGTCCTCGGATCGAAACCGAG CGGCGCTAA chrXV:710006-710475 + 51 3.95e-07 CTCATAACCC TGATGTCCTCGGATCGAAACCGAG CGGCGCTAAT chrII:167545-169629 + 37 1.82e-05 AACATCCATA GAAGAACCTCAGATAAATTTCAAG CTTGTACGAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DRAGRTCCBSGGTTCGATYCCSVK MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:631568-632135 9.6e-15 52_[-1]_24 chrIII:123365-123805 9.6e-15 49_[-1]_27 chrXVI:860151-860639 1.7e-11 72_[+1]_4 chrXVI:572010-572564 1.7e-11 70_[+1]_6 chrXV:281875-282527 1.7e-11 51_[+1]_25 chrXV:226411-226899 1.7e-11 13_[-1]_63 chrXIII:183646-184184 1.7e-11 40_[-1]_36 chrX:531567-532201 1.7e-11 32_[+1]_44 chrVII:930760-931223 1.7e-11 19_[-1]_57 chrVII:845424-845908 1.7e-11 71_[+1]_5 chrVI:180670-181274 1.7e-11 59_[-1]_17 chrXV:854013-854449 2.8e-11 13_[-1]_63 chrXII:214659-215163 2.8e-11 29_[-1]_47 chrV:311756-312290 2.8e-11 57_[-1]_19 chrI:166032-166588 2.8e-11 47_[+1]_29 chrXVI:819309-819857 3.3e-11 37_[+1]_39 chrXIV:569665-570151 3.3e-11 16_[-1]_60 chrIV:667734-668257 3.3e-11 69_[-1]_7 chrII:197226-197882 3.3e-11 31_[+1]_45 chrVIII:134057-134628 5.4e-11 68_[+1]_8 chrIV:802532-803025 5.4e-11 10_[-1]_66 chrIV:644944-645399 5.4e-11 39_[-1]_37 chrIV:520712-521293 5.4e-11 59_[+1]_17 chrII:350546-351156 5.4e-11 65_[+1]_11 chrXV:980465-981131 7.4e-11 7_[+1]_69 chrXV:464243-464776 7.4e-11 60_[+1]_16 chrXIV:567893-568493 7.4e-11 42_[+1]_34 chrXIV:546943-547416 7.4e-11 35_[+1]_41 chrXII:92309-92907 7.4e-11 60_[+1]_16 chrVIII:388661-389215 7.4e-11 12_[-1]_64 chrV:130822-131434 8.6e-11 11_[-1]_65 chrXIII:290528-291164 1.2e-10 44_[+1]_32 chrVII:541618-542179 1.2e-10 41_[+1]_35 chrVII:401335-401778 1.2e-10 28_[-1]_48 chrV:487075-487642 1.2e-10 30_[-1]_46 chrV:176887-177455 1.2e-10 17_[+1]_59 chrIV:1016963-1017513 1.2e-10 26_[-1]_50 chrXV:663478-664112 1.3e-10 74_[-1]_2 chrXIII:586394-586931 1.3e-10 31_[-1]_45 chrXIII:420312-420897 1.3e-10 41_[-1]_35 chrXIII:372185-372728 1.3e-10 46_[-1]_30 chrXII:687657-688162 1.3e-10 7_[-1]_69 chrVIII:85107-85569 1.3e-10 17_[-1]_59 chrVII:412104-412591 1.3e-10 4_[-1]_72 chrV:469236-469848 1.3e-10 6_[+1]_70 chrIV:488430-489145 1.3e-10 67_[-1]_9 chrVII:779392-779913 3.6e-10 53_[+1]_23 chrXIII:480354-480924 6.8e-10 39_[-1]_37 chrXI:202819-203324 6.8e-10 18_[+1]_58 chrX:414778-415250 6.8e-10 42_[+1]_34 chrVII:876185-876775 6.8e-10 4_[+1]_72 chrVII:185389-186062 6.8e-10 46_[-1]_30 chrVII:122061-122576 6.8e-10 41_[+1]_35 chrV:135145-135698 6.8e-10 61_[-1]_15 chrXIII:131612-132115 1.1e-09 19_[-1]_57 chrXI:162258-162766 1.1e-09 32_[-1]_44 chrX:374193-374828 1.1e-09 53_[-1]_23 chrX:355139-355732 1.1e-09 28_[+1]_48 chrVII:828465-828986 1.1e-09 55_[-1]_21 chrVII:736190-736551 1.1e-09 59_[+1]_17 chrVII:405272-405798 1.1e-09 24_[+1]_52 chrX:233660-234304 1.6e-09 47_[+1]_29 chrXIII:768188-768629 1.8e-09 18_[-1]_58 chrXIII:320937-321325 1.8e-09 73_[-1]_3 chrXII:656688-657212 1.8e-09 41_[-1]_35 chrIV:410173-410665 1.8e-09 50_[+1]_26 chrXIV:104578-105116 2.5e-09 48_[+1]_28 chrX:58725-59442 2.5e-09 74_[-1]_2 chrIX:325517-326110 2.5e-09 25_[+1]_51 chrIV:434013-434557 2.5e-09 36_[-1]_40 chrXVI:768939-769513 3.1e-09 38_[-1]_38 chrXV:438453-438976 3.1e-09 42_[+1]_34 chrXI:578730-579330 3.1e-09 48_[+1]_28 chrXII:374203-374637 8.9e-09 25_[+1]_51 chrXI:490735-491292 8.9e-09 45_[+1]_31 chrIV:619646-620265 8.9e-09 71_[-1]_5 chrVIII:358263-358783 1.6e-08 12_[-1]_64 chrIV:1095137-1095677 1.6e-08 20_[-1]_56 chrXIII:463306-463902 2.5e-08 39_[+1]_37 chrXII:426897-427479 2.5e-08 33_[+1]_43 chrX:541317-541825 2.5e-08 26_[+1]_50 chrIX:336125-336651 2.5e-08 18_[-1]_58 chrIV:568680-569319 2.5e-08 54_[+1]_22 chrII:405627-406360 2.5e-08 56_[+1]_20 chrXVI:55846-56527 4.6e-08 40_[-1]_36 chrXIII:378952-379621 4.6e-08 74_[-1]_2 chrXI:302502-303473 4.6e-08 54_[+1]_22 chrVIII:466766-467277 4.6e-08 58_[+1]_18 chrVII:287094-287688 4.6e-08 16_[-1]_60 chrX:422646-423282 5.4e-08 63_[+1]_13 chrX:390837-391327 5.4e-08 18_[-1]_58 chrXIII:362821-363354 1.2e-07 66_[+1]_10 chrXI:313163-313684 1.2e-07 35_[-1]_41 chrVII:700154-701269 1.2e-07 63_[+1]_13 chrVII:319576-320136 1.2e-07 14_[+1]_62 chrVII:110408-110935 1.2e-07 11_[-1]_65 chrV:434385-434776 1.2e-07 18_[-1]_58 chrV:206932-207902 1.2e-07 29_[+1]_47 chrXV:487220-487713 1.3e-07 64_[+1]_12 chrXV:228106-228625 1.3e-07 57_[+1]_19 chrXIV:632396-632901 1.3e-07 42_[+1]_34 chrXIV:102484-103022 1.3e-07 54_[+1]_22 chrXII:975763-976245 1.3e-07 36_[-1]_40 chrXI:74358-75002 1.3e-07 35_[+1]_41 chrVII:730940-731412 1.3e-07 52_[+1]_24 chrXVI:744045-744667 1.7e-07 17_[+1]_59 chrXIV:725903-726422 1.9e-07 23_[+1]_53 chrVII:706898-707345 1.9e-07 44_[-1]_32 chrII:347402-347914 1.9e-07 52_[-1]_24 chrII:9368-9961 1.9e-07 26_[-1]_50 chrXIII:837702-838259 2.3e-07 54_[+1]_22 chrIV:946124-946617 2.3e-07 48_[+1]_28 chrXVI:338647-339146 4e-07 9_[-1]_67 chrXV:710006-710475 4e-07 50_[+1]_26 chrII:167545-169629 1.8e-05 36_[+1]_40 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DRAGRTCCBSGGTTCGATYCCSVK MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF DRAGRTCCBSGGTTCGATYCCSVK width=24 seqs=115 chrXIV:631568-632135 ( 53) GGAGGTCCCGGGTTCGAGTCCCGG 1 chrIII:123365-123805 ( 50) GGAGGTCCCGGGTTCGAGTCCCGG 1 chrXVI:860151-860639 ( 73) TTGGGCCCCCGGTTCGATTCCGGG 1 chrXVI:572010-572564 ( 71) TTGGGCCCCCGGTTCGATTCCGGG 1 chrXV:281875-282527 ( 52) TTGGGCCCCCGGTTCGATTCCGGG 1 chrXV:226411-226899 ( 14) TTGGGCCCCCGGTTCGATTCCGGG 1 chrXIII:183646-184184 ( 41) TTGGGCCCCCGGTTCGATTCCGGG 1 chrX:531567-532201 ( 33) TTGGGCCCCCGGTTCGATTCCGGG 1 chrVII:930760-931223 ( 20) TTGGGCCCCCGGTTCGATTCCGGG 1 chrVII:845424-845908 ( 72) TTGGGCCCCCGGTTCGATTCCGGG 1 chrVI:180670-181274 ( 60) TTGGGCCCCCGGTTCGATTCCGGG 1 chrXV:854013-854449 ( 14) AGAGGTCATCGGTTCGATTCCGGT 1 chrXII:214659-215163 ( 30) AGAGGTCATCGGTTCGATTCCGGT 1 chrV:311756-312290 ( 58) AGAGGTCATCGGTTCGATTCCGGT 1 chrI:166032-166588 ( 48) AGAGGTCATCGGTTCGATTCCGGT 1 chrXVI:819309-819857 ( 38) GGGGATCAGCGGTTCGATCCCGCT 1 chrXIV:569665-570151 ( 17) GGGGATCAGCGGTTCGATCCCGCT 1 chrIV:667734-668257 ( 70) GGGGATCAGCGGTTCGATCCCGCT 1 chrII:197226-197882 ( 32) GGGGATCAGCGGTTCGATCCCGCT 1 chrVIII:134057-134628 ( 69) GGACAACCCCGGTTCGAATCCGGG 1 chrIV:802532-803025 ( 11) GGACAACCCCGGTTCGAATCCGGG 1 chrIV:644944-645399 ( 40) GGACAACCCCGGTTCGAATCCGGG 1 chrIV:520712-521293 ( 60) GGACAACCCCGGTTCGAATCCGGG 1 chrII:350546-351156 ( 66) GGACAACCCCGGTTCGAATCCGGG 1 chrXV:980465-981131 ( 8) AGAGGCCCTGGGTTCAATTCCCAG 1 chrXV:464243-464776 ( 61) AGAGGCCCTGGGTTCAATTCCCAG 1 chrXIV:567893-568493 ( 43) AGAGGCCCTGGGTTCAATTCCCAG 1 chrXIV:546943-547416 ( 36) AGAGGCCCTGGGTTCAATTCCCAG 1 chrXII:92309-92907 ( 61) AGAGGCCCTGGGTTCAATTCCCAG 1 chrVIII:388661-389215 ( 13) AGAGGCCCTGGGTTCAATTCCCAG 1 chrV:130822-131434 ( 12) GAACAACCCCGGTTCGAATCCGGG 1 chrXIII:290528-291164 ( 45) TGGAGACCGGGGTTCGACTCCCCG 1 chrVII:541618-542179 ( 42) TGGAGACCGGGGTTCGACTCCCCG 1 chrVII:401335-401778 ( 29) TGGAGACCGGGGTTCGACTCCCCG 1 chrV:487075-487642 ( 31) TGGAGACCGGGGTTCGACTCCCCG 1 chrV:176887-177455 ( 18) TGGAGACCGGGGTTCGACTCCCCG 1 chrIV:1016963-1017513 ( 27) TGGAGACCGGGGTTCGACTCCCCG 1 chrXV:663478-664112 ( 75) GAACGTCCCCAGTTCGATCCTGGG 1 chrXIII:586394-586931 ( 32) GAACGTCCCCAGTTCGATCCTGGG 1 chrXIII:420312-420897 ( 42) GAACGTCCCCAGTTCGATCCTGGG 1 chrXIII:372185-372728 ( 47) GAACGTCCCCAGTTCGATCCTGGG 1 chrXII:687657-688162 ( 8) GAACGTCCCCAGTTCGATCCTGGG 1 chrVIII:85107-85569 ( 18) GAACGTCCCCAGTTCGATCCTGGG 1 chrVII:412104-412591 ( 5) GAACGTCCCCAGTTCGATCCTGGG 1 chrV:469236-469848 ( 7) GAACGTCCCCAGTTCGATCCTGGG 1 chrIV:488430-489145 ( 68) GAAGATCCCGAGTTCGAACCTCGG 1 chrVII:779392-779913 ( 54) TGGGGACACGGGTTCGATTCTCGT 1 chrXIII:480354-480924 ( 40) TAAGGTTAGGGGTTCGAGCCCCCT 1 chrXI:202819-203324 ( 19) TAAGGTTAGGGGTTCGAGCCCCCT 1 chrX:414778-415250 ( 43) TAAGGTTAGGGGTTCGAGCCCCCT 1 chrVII:876185-876775 ( 5) TAAGGTTAGGGGTTCGAGCCCCCT 1 chrVII:185389-186062 ( 47) TAAGGTTAGGGGTTCGAGCCCCCT 1 chrVII:122061-122576 ( 42) TAAGGTTAGGGGTTCGAGCCCCCT 1 chrV:135145-135698 ( 62) TAAGGTTAGGGGTTCGAGCCCCCT 1 chrXIII:131612-132115 ( 20) GAAGATTATGGGTTCGACCCCCAT 1 chrXI:162258-162766 ( 33) GAAGATTATGGGTTCGACCCCCAT 1 chrX:374193-374828 ( 54) GAAGATTATGGGTTCGACCCCCAT 1 chrX:355139-355732 ( 29) GAAGATTATGGGTTCGACCCCCAT 1 chrVII:828465-828986 ( 56) GAAGATTATGGGTTCGACCCCCAT 1 chrVII:736190-736551 ( 60) GAAGATTATGGGTTCGACCCCCAT 1 chrVII:405272-405798 ( 25) GAAGATTATGGGTTCGACCCCCAT 1 chrX:233660-234304 ( 48) GGAGATTCCAGGTTCGAGTCCTGG 1 chrXIII:768188-768629 ( 19) AGAGGTCTCCGGTTCGATTCCGGA 1 chrXIII:320937-321325 ( 74) AGAGGTCTCCGGTTCGATTCCGGA 1 chrXII:656688-657212 ( 42) AGAGGTCTCCGGTTCGATTCCGGA 1 chrIV:410173-410665 ( 51) AGAGGTCTCCGGTTCGATTCCGGA 1 chrXIV:104578-105116 ( 49) GGAGATCATCGGTTCAAATCCGAT 1 chrX:58725-59442 ( 75) GGAGATCATCGGTTCAAATCCGAT 1 chrIX:325517-326110 ( 26) GGAGATCATCGGTTCAAATCCGAT 1 chrIV:434013-434557 ( 37) GGAGATCATCGGTTCAAATCCGAT 1 chrXVI:768939-769513 ( 39) AAATGTCAGGGGTTCGAGCCCCCT 1 chrXV:438453-438976 ( 43) AAATGTCAGGGGTTCGAGCCCCCT 1 chrXI:578730-579330 ( 49) AAATGTCAGGGGTTCGAGCCCCCT 1 chrXII:374203-374637 ( 26) GAAGATTCCAGGTTCAAGTCCTGG 1 chrXI:490735-491292 ( 46) GAAGATTCCAGGTTCAAGTCCTGG 1 chrIV:619646-620265 ( 72) GAAGATTCCAGGTTCAAGTCCTGG 1 chrVIII:358263-358783 ( 13) GGAGGTCCTGTGTTCGATCCACAG 1 chrIV:1095137-1095677 ( 21) GGAGGTCCTGTGTTCGATCCACAG 1 chrXIII:463306-463902 ( 40) GCCAGATCGGGGTTCAATTCCCCG 1 chrXII:426897-427479 ( 34) GCCAGATCGGGGTTCAATTCCCCG 1 chrX:541317-541825 ( 27) GCCAGATCGGGGTTCAATTCCCCG 1 chrIX:336125-336651 ( 19) GCCAGATCGGGGTTCAATTCCCCG 1 chrIV:568680-569319 ( 55) GCCAGATCGGGGTTCAATTCCCCG 1 chrII:405627-406360 ( 57) GCCAGATCGGGGTTCAATTCCCCG 1 chrXVI:55846-56527 ( 41) AAGGGTTGCAGGTTCAATTCCTGT 1 chrXIII:378952-379621 ( 75) AAGGGTTGCAGGTTCAATTCCTGT 1 chrXI:302502-303473 ( 55) AAGGGTTGCAGGTTCAATTCCTGT 1 chrVIII:466766-467277 ( 59) AAAGGTCGCTAGTTCAATTCTGGC 1 chrVII:287094-287688 ( 17) AAGGGTTGCAGGTTCAATTCCTGT 1 chrX:422646-423282 ( 64) GAAGGTCGAGAGTTCGAACCTCCC 1 chrX:390837-391327 ( 19) GAAGGTCGAGAGTTCGAACCTCCC 1 chrXIII:362821-363354 ( 67) ATGAAACCCTGGTTCGATTCTAGG 1 chrXI:313163-313684 ( 36) ATGAAACCCTGGTTCGATTCTAGG 1 chrVII:700154-701269 ( 64) CGGAGGCGCGGGTTCAAACCCCGC 1 chrVII:319576-320136 ( 15) ATGAAACCCTGGTTCGATTCTAGG 1 chrVII:110408-110935 ( 12) ATGAAACCCTGGTTCGATTCTAGG 1 chrV:434385-434776 ( 19) ATGAAACCCTGGTTCGATTCTAGG 1 chrV:206932-207902 ( 30) ATGAAACCCTGGTTCGATTCTAGG 1 chrXV:487220-487713 ( 65) CAAGATCGTGAGTTCAACCCTCAC 1 chrXV:228106-228625 ( 58) CAAGATCGTGAGTTCAACCCTCAC 1 chrXIV:632396-632901 ( 43) CAAGATCGTGAGTTCAACCCTCAC 1 chrXIV:102484-103022 ( 55) CAAGATCGTGAGTTCAACCCTCAC 1 chrXII:975763-976245 ( 37) CAAGATCGTGAGTTCAACCCTCAC 1 chrXI:74358-75002 ( 36) CAAGATCGTGAGTTCAACCCTCAC 1 chrVII:730940-731412 ( 53) CAAGATCGTGAGTTCAACCCTCAC 1 chrXVI:744045-744667 ( 18) AAAGGTCGTTAGTTCAATTCTGAC 1 chrXIV:725903-726422 ( 24) AAGGATGCGAGGTTCGAACTCGCG 1 chrVII:706898-707345 ( 45) GTTGGTCCTTAGTTCGATCCTGAG 1 chrII:347402-347914 ( 53) AAGGATGCGAGGTTCGAACTCGCG 1 chrII:9368-9961 ( 27) AAGGATGCGAGGTTCGAACTCGCG 1 chrXIII:837702-838259 ( 55) TGAGATCGGGCGTTCGACTCGCCC 1 chrIV:946124-946617 ( 49) TGAGATCGGGCGTTCGACTCGCCC 1 chrXVI:338647-339146 ( 10) TGATGTCCTCGGATCGAAACCGAG 1 chrXV:710006-710475 ( 51) TGATGTCCTCGGATCGAAACCGAG 1 chrII:167545-169629 ( 37) GAAGAACCTCAGATAAATTTCAAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DRAGRTCCBSGGTTCGATYCCSVK MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 24 n= 44891 bayes= 10.2911 E= 2.8e-432 -17 -143 116 -41 45 -184 103 -117 104 -184 66 -516 -92 -62 184 -285 32 -1349 170 -1349 -47 -52 -443 102 -1349 196 -284 -36 -26 155 -26 -317 -417 113 53 -4 -171 96 130 -200 -71 -343 205 -417 -1349 -1349 242 -1349 -358 -1349 -1349 164 -1349 -1349 -1349 168 -516 240 -1349 -1349 -8 -1349 191 -1349 168 -1349 -1349 -1349 -92 3 -43 69 -417 109 -1349 90 -1349 237 -1349 -317 -417 195 -343 -36 -236 130 113 -217 -21 62 124 -1349 -317 -62 155 -8 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DRAGRTCCBSGGTTCGATYCCSVK MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 24 nsites= 115 E= 2.8e-432 0.278261 0.069565 0.417391 0.234783 0.426087 0.052174 0.382609 0.139130 0.643478 0.052174 0.295652 0.008696 0.165217 0.121739 0.669565 0.043478 0.391304 0.000000 0.608696 0.000000 0.226087 0.130435 0.008696 0.634783 0.000000 0.730435 0.026087 0.243478 0.260870 0.547826 0.156522 0.034783 0.017391 0.408696 0.269565 0.304348 0.095652 0.365217 0.460870 0.078261 0.191304 0.017391 0.773913 0.017391 0.000000 0.000000 1.000000 0.000000 0.026087 0.000000 0.000000 0.973913 0.000000 0.000000 0.000000 1.000000 0.008696 0.991304 0.000000 0.000000 0.295652 0.000000 0.704348 0.000000 1.000000 0.000000 0.000000 0.000000 0.165217 0.191304 0.139130 0.504348 0.017391 0.400000 0.000000 0.582609 0.000000 0.965217 0.000000 0.034783 0.017391 0.721739 0.017391 0.243478 0.060870 0.460870 0.408696 0.069565 0.269565 0.286957 0.443478 0.000000 0.034783 0.121739 0.547826 0.295652 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DRAGRTCCBSGGTTCGATYCCSVK MEME-1 regular expression -------------------------------------------------------------------------------- [GAT][AG][AG]G[GA][TA][CT][CA][CTG][GC]GGTTC[GA]AT[TC]C[CT][CG][GCA][GT] -------------------------------------------------------------------------------- Time 329.80 secs. ******************************************************************************** ******************************************************************************** MOTIF SSCTYWAMCMACTRVRCYAHV MEME-2 width = 21 sites = 128 llr = 1834 E-value = 8.9e-316 ******************************************************************************** -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRVRCYAHV MEME-2 Description -------------------------------------------------------------------------------- Simplified A 11111465:49::443::a43 pos.-specific C 53613:15a5:8:22:96:33 probability G 46:2::2::11::3471:::3 matrix T ::35561::::2a1:::4:31 bits 2.4 * 2.2 * * 1.9 * * 1.7 * ** * * Relative 1.4 * *** * * Entropy 1.2 * *** **** (20.7 bits) 1.0 *** ** *** **** 0.7 *** * ** *** ***** 0.5 *** ** ****** ***** 0.2 ********************* 0.0 --------------------- Multilevel CGCTTTACCCACTAGGCCAAG consensus GCT CAGA A GAA T CA sequence C TC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRVRCYAHV MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXVI:880118-880587 + 42 1.83e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCATTAT chrXVI:819309-819857 - 1 1.83e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAG chrXIV:602104-602531 - 50 1.83e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCATTGT chrXIV:569665-570151 + 57 1.83e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCACTGT chrXII:1051876-1052385 + 39 1.83e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCATGAA chrVII:738863-739407 - 42 1.83e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCTATTT chrV:551126-551573 + 34 1.83e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCTGTAA chrV:443038-443501 + 31 1.83e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCAAATT chrIX:183290-183715 + 36 1.83e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCAGGAA chrXV:854013-854449 + 53 2.36e-10 GCAAGGGAAG CGCGCTACCAACTGCGCCATG TGCCCTGATG chrXII:214659-215163 + 69 2.36e-10 GCAAGGGAAG CGCGCTACCAACTGCGCCATG TGCCCTAAAA chrI:166032-166588 - 12 2.36e-10 GCAAGGGAAG CGCGCTACCAACTGCGCCATG TGCCCAACTC chrXIII:258996-259494 + 19 3.02e-10 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCCATACT chrXII:167729-168287 + 42 3.02e-10 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCCATATG chrX:523826-524329 + 41 3.02e-10 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCCTTTAA chrVIII:132776-133422 + 33 3.02e-10 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCCACTTA chrIV:980763-981264 + 67 3.02e-10 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCCTCAAT chrI:182340-182792 + 62 3.02e-10 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCCAAAAT chrXII:875209-875620 - 17 7.59e-10 AAAAGCCGAA CGCTCTACCAACTGAGCTAAC AAGGATGAGT chrVII:115226-115783 - 39 7.59e-10 AAAAGCCGAA CGCTCTACCAACTGAGCTAAC AAGGATGAGT chrIV:359365-359837 - 31 7.59e-10 AAAAGCCGAA CGCTCTACCAACTGAGCTAAC AAGGATGAGT chrXIII:768188-768629 + 58 1.42e-09 GCTAAGGGAG CGCGCTACCGACTACGCCACA CGCCCATTTC chrX:197160-197617 + 22 1.42e-09 GCTAAGGGAG CGCGCTACCGACTACGCCACA CGCCCTAATA chrVII:774070-774612 - 63 1.42e-09 GCTAAGGGAG CGCGCTACCGACTACGCCACA CGCCCAATTA chrVI:204812-205205 + 13 1.42e-09 GCTAAGGGAG CGCGCTACCGACTACGCCACA CGCCCGAACG chrIV:410173-410665 - 15 1.42e-09 GCTAAGGGAG CGCGCTACCGACTACGCCACA CGCCCAATAT chrV:288174-288863 + 31 1.74e-09 TCAAGTCTGT CGCCTTAACCACTCGGCCATA GTGCCTATCA chrIII:227761-228204 - 15 1.74e-09 TCGAGTCTCT CGCCTTAACCACTCGGCCATA GTGCCATTTC chrXII:731903-732267 - 60 2.11e-09 TAAATCTGAC GCCTTAAACCACTCGGCCAAA CTCCCATTGT chrXIV:725903-726422 + 80 2.55e-09 TAAGTCTGCC GCCTTAGACCACTCGGCCAAC chrXI:83949-84443 - 67 2.55e-09 TAAGTCTGCC GCCTTAGACCACTCGGCCAAC CCTCCATACA chrX:424292-424743 + 23 2.55e-09 TAAGTCTGCC GCCTTAGACCACTCGGCCAAC CCTCCATCTT chrIV:519553-519949 - 47 2.55e-09 TAAGTCTGCC GCCTTAGACCACTCGGCCAAC CCTCCGTAAA chrXV:274464-274989 - 2 3.08e-09 AGCAGGGCAT CGCCTTAACCACTCGGCCACT G chrXVI:810452-810890 - 60 3.69e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCGCAAA chrXV:487220-487713 - 28 3.69e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCTAACT chrXV:228106-228625 - 21 3.69e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCTAATA chrXIV:632396-632901 - 6 3.69e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTC chrXIV:102484-103022 - 18 3.69e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCTTATA chrXII:975763-976245 + 77 3.69e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAG chrVII:730940-731412 - 16 3.69e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCTTTTT chrIII:127513-127918 - 56 3.69e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCATTTT chrXV:113578-114006 - 65 6.22e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCATA GAAGCTAAAT chrXIV:104578-105116 - 13 6.22e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCATA GAAGCTCAGA chrIX:174807-175259 - 53 6.22e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCATA GAAGCTCGTA chrIV:434013-434557 + 76 6.22e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCATA GAAG chrXIV:374669-375122 - 29 8.65e-09 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAG TCCGCTTATT chrIV:1095137-1095677 + 79 8.65e-09 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAG T chrXVI:581810-582330 - 47 1.39e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCTCTTT chrXIII:480354-480924 + 79 1.39e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC A chrX:414778-415250 - 7 1.39e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCT chrVII:122061-122576 - 6 1.39e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGC chrVI:226556-226928 + 43 1.39e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCATTTT chrIV:1352326-1352734 + 33 1.39e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCTATTT chrXVI:622327-622871 + 57 2.16e-08 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAA TCCGCATATC chrXVI:560016-560529 + 42 2.16e-08 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAA TCCGCTCAAT chrXIII:352068-352539 - 32 2.16e-08 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAA TCCGCTTATA chrVIII:358263-358783 + 71 2.16e-08 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAA TCCGCTTAC chrVIII:237746-238144 + 19 2.16e-08 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAA TCCGCTTACT chrVI:157698-158278 + 44 2.16e-08 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAA TCCGCTTCTA chrII:36172-36590 - 72 2.16e-08 CAGTCTGG CGCTCTCCCAACTGAGCTAAA TCCGCTTACA chrXII:605128-605648 + 69 2.49e-08 ATAAGCACGA AGCTCTAACCACTGAGCTACA CGAGCATTTT chrXIII:586394-586931 + 72 3.29e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCATA chrXII:687657-688162 + 48 3.29e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCTATTA chrXI:379454-379909 - 54 3.29e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCTATTA chrXI:307998-308429 + 29 3.29e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCACTTA chrVIII:85107-85569 + 58 3.29e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCAAATT chrVII:823239-823707 - 64 3.29e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCACTCT chrVII:412104-412591 + 45 3.29e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCAGTTT chrXII:628052-628789 - 18 7.11e-08 TGAATCAGGC GCCTTAGACCGCTCGGCCAAA CAACCACTTA chrIV:1461486-1462090 + 66 7.11e-08 TGAATCAGGC GCCTTAGACCGCTCGGCCAAA CAACCACTTA chrI:180906-181454 - 16 7.11e-08 TGAATCAGGC GCCTTAGACCGCTCGGCCAAA CAACCACTTA chrXV:340132-340577 + 42 8.03e-08 CGTAGCCAGA CGCCGTGACCATTGGGCCACG AGGAACAGAT chrXI:490735-491292 - 10 8.03e-08 CGTAGCCAGA CGCCGTGACCATTGGGCCACG AGGAACAAG chrX:233660-234304 - 12 8.03e-08 CGTAGCCAGA CGCCGTGACCATTGGGCCACG AGGAACAAGA chrXIII:837702-838259 - 3 1.97e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACC GA chrXIII:168593-169043 - 32 1.97e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACC GAGAGTGACT chrX:353953-354525 - 60 1.97e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACC GAGAGTGATA chrVI:210443-210915 + 53 1.97e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACC GAGAGTCGTT chrVI:167230-167693 - 31 1.97e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACC GAGAGTCGTT chrVII:700154-701269 - 19 2.95e-07 TCGACCTGAC GCCTTAGACCACTCGGCCAGA GTACCAATTC chrX:422646-423282 - 28 5.16e-07 ATGAGACTGA CGCTCTTCCTACTGAGCTACT GAAGCATACA chrX:390837-391327 + 58 5.16e-07 ATGAGACTGA CGCTCTTCCTACTGAGCTACT GAAGCACTAT chrIV:1175586-1176082 - 50 5.16e-07 ATGAGACTGA CGCTCTTCCTACTGAGCTACT GAAGCTTTGT chrXIII:923198-924383 + 32 6.70e-07 AATGGAACAG GGTATAGACCACTGAGGCAAG TGCCGTGCAT chrXVI:860151-860639 - 39 7.29e-07 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCTTGTT chrXVI:572010-572564 - 37 7.29e-07 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCGAAGT chrXV:281875-282527 - 18 7.29e-07 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCGCTTT chrXV:226411-226899 + 51 7.29e-07 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCTGAAT chrXIII:183646-184184 + 78 7.29e-07 TGGCAACGTT GGATTTTACCACTAAACCACT TG chrVII:930760-931223 + 57 7.29e-07 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCTTACT chrVII:845424-845908 - 38 7.29e-07 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCTTGTT chrVI:162017-162448 - 51 7.29e-07 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCTTGTT chrIV:992581-993063 - 65 7.29e-07 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCTCACA chrIV:83300-83804 - 51 7.29e-07 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCTAAGT chrXII:11021-11996 + 75 7.92e-07 CCTCCAATTA CCCATATCCAACTCCACTACC GCTTA chrIV:1256866-1257284 + 29 1.37e-06 GGGAAGCATG AATTCTAACCACTGAACCACT TTCGCTAAGA chrXV:110833-111276 + 4 1.82e-06 TGG GATGATAACCACTACACTAAC CGCCCGGGTT chrXI:0-1049 - 80 1.82e-06 . GGTATAAACCGCTGAGGCAAG TGCCGTGAAT chrVII:779392-779913 - 19 1.82e-06 GGAAGGGTGG GATGATAACCACTACACTAAC CGCCCGGGGT chrXIII:463306-463902 - 5 2.54e-06 GACAAGCGCC CATTCTGACCATTAAACTATC ACGG chrXI:513175-513640 + 21 2.54e-06 GACAAGCGCC CATTCTGACCATTAAACTATC ACGGAACGTT chrX:374193-374828 + 10 2.54e-06 ACAAGCGCC CATTCTGACCATTAAACTATC ACGGAAGAAA chrX:355139-355732 - 76 2.54e-06 CGCC CATTCTGACCATTAAACTATC ACGGAAGAAA chrX:204467-205002 - 56 2.54e-06 GACAAGCGCC CATTCTGACCATTAAACTATC ACGGATTTTT chrVII:544386-544915 + 23 2.54e-06 GACAAGCGCC CATTCTGACCATTAAACTATC ACGGAAGAAA chrVII:531417-531777 - 68 2.54e-06 GACAAGCGCC CATTCTGACCATTAAACTATC ACGGAAGTAA chrIX:438678-439886 + 69 2.54e-06 AATGGCACAG GGTATAGACCGCTGAGGCAAG TACCGTGCAC chrIX:336125-336651 + 57 2.54e-06 GACAAGCGCC CATTCTGACCATTAAACTATC ACGGATTTGT chrIX:324146-324608 + 22 2.54e-06 GACAAGCGCC CATTCTGACCATTAAACTATC ACGGAATATT chrIV:1524085-1525652 + 40 2.54e-06 AATGGCACAG GGTATAGACCGCTGAGGCAAG TGCCGTGTAT chrIV:568680-569319 - 20 2.54e-06 GACAAGCGCC CATTCTGACCATTAAACTATC ACGGAAGAAA chrII:405627-406360 - 22 2.54e-06 GACAAGCGCC CATTCTGACCATTAAACTATC ACGGAAGAAA chrI:229196-230194 + 1 2.54e-06 . GGTATAGACCGCTGAGGCAAG TGCCGTGTAT chrI:4-1131 - 31 2.54e-06 AATGGCACAG GGTATAGACCGCTGAGGCAAG TGCCGTGCAT chrXII:489292-489566 - 17 2.71e-06 ACTCGGTCAG GCTCTTACCAGCTTAACTACA GTTGATCGGA chrXII:448471-448980 + 21 2.71e-06 CAAAACCGAA AGTGATAACCACTACACTATA GGACCGGAAC chrVIII:134057-134628 - 34 2.71e-06 CAAAACCGAA AGTGATAACCACTACACTATA GGACCGGAAC chrV:130822-131434 + 50 2.71e-06 CAAAACCGAA AGTGATAACCACTACACTATA AAACCTCTTA chrIV:802532-803025 + 49 2.71e-06 CAAAACCGAA AGTGATAACCACTACACTATA GGACCGACAA chrIV:644944-645399 + 78 2.71e-06 CAAAACCGAA AGTGATAACCACTACACTATA GG chrIV:520712-521293 - 25 2.71e-06 CAAAACCGAA AGTGATAACCACTACACTATA GGACCCTAAA chrIII:168111-168620 + 32 2.71e-06 CAAAACCGAA AGTGATAACCACTACACTATA GGACCAGGAC chrII:350546-351156 - 31 2.71e-06 CAAAACCGAA AGTGATAACCACTACACTATA AAACCCTTTT chrXIV:783371-784324 - 27 8.98e-06 CCTCCAATTA CCCATATCCAACCCCACTACC ACTTACCCTG chrXIV:96023-96617 - 51 1.03e-05 CTTATTACCT CGTCATTACAGTTACACCATC CAACACATGG chrXV:842365-843039 - 58 1.28e-05 TCACTAAAGC GCCTTAGCTGACTACAGCACA ACCCAACCCC chrII:477092-477785 - 50 1.28e-05 AAAAGAAGGT GATGGAACCAATTTAGCTATA TATAGTTAAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRVRCYAHV MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXVI:880118-880587 1.8e-10 41_[+2]_38 chrXVI:819309-819857 1.8e-10 [-2]_79 chrXIV:602104-602531 1.8e-10 49_[-2]_30 chrXIV:569665-570151 1.8e-10 56_[+2]_23 chrXII:1051876-1052385 1.8e-10 38_[+2]_41 chrVII:738863-739407 1.8e-10 41_[-2]_38 chrV:551126-551573 1.8e-10 33_[+2]_46 chrV:443038-443501 1.8e-10 30_[+2]_49 chrIX:183290-183715 1.8e-10 35_[+2]_44 chrXV:854013-854449 2.4e-10 52_[+2]_27 chrXII:214659-215163 2.4e-10 68_[+2]_11 chrI:166032-166588 2.4e-10 11_[-2]_68 chrXIII:258996-259494 3e-10 18_[+2]_61 chrXII:167729-168287 3e-10 41_[+2]_38 chrX:523826-524329 3e-10 40_[+2]_39 chrVIII:132776-133422 3e-10 32_[+2]_47 chrIV:980763-981264 3e-10 66_[+2]_13 chrI:182340-182792 3e-10 61_[+2]_18 chrXII:875209-875620 7.6e-10 16_[-2]_63 chrVII:115226-115783 7.6e-10 38_[-2]_41 chrIV:359365-359837 7.6e-10 30_[-2]_49 chrXIII:768188-768629 1.4e-09 57_[+2]_22 chrX:197160-197617 1.4e-09 21_[+2]_58 chrVII:774070-774612 1.4e-09 62_[-2]_17 chrVI:204812-205205 1.4e-09 12_[+2]_67 chrIV:410173-410665 1.4e-09 14_[-2]_65 chrV:288174-288863 1.7e-09 30_[+2]_49 chrIII:227761-228204 1.7e-09 14_[-2]_65 chrXII:731903-732267 2.1e-09 59_[-2]_20 chrXIV:725903-726422 2.6e-09 79_[+2] chrXI:83949-84443 2.6e-09 66_[-2]_13 chrX:424292-424743 2.6e-09 22_[+2]_57 chrIV:519553-519949 2.6e-09 46_[-2]_33 chrXV:274464-274989 3.1e-09 1_[-2]_78 chrXVI:810452-810890 3.7e-09 59_[-2]_20 chrXV:487220-487713 3.7e-09 27_[-2]_52 chrXV:228106-228625 3.7e-09 20_[-2]_59 chrXIV:632396-632901 3.7e-09 5_[-2]_74 chrXIV:102484-103022 3.7e-09 17_[-2]_62 chrXII:975763-976245 3.7e-09 76_[+2]_3 chrVII:730940-731412 3.7e-09 15_[-2]_64 chrIII:127513-127918 3.7e-09 55_[-2]_24 chrXV:113578-114006 6.2e-09 64_[-2]_15 chrXIV:104578-105116 6.2e-09 12_[-2]_67 chrIX:174807-175259 6.2e-09 52_[-2]_27 chrIV:434013-434557 6.2e-09 75_[+2]_4 chrXIV:374669-375122 8.7e-09 28_[-2]_51 chrIV:1095137-1095677 8.7e-09 78_[+2]_1 chrXVI:581810-582330 1.4e-08 46_[-2]_33 chrXIII:480354-480924 1.4e-08 78_[+2]_1 chrX:414778-415250 1.4e-08 6_[-2]_73 chrVII:122061-122576 1.4e-08 5_[-2]_74 chrVI:226556-226928 1.4e-08 42_[+2]_37 chrIV:1352326-1352734 1.4e-08 32_[+2]_47 chrXVI:622327-622871 2.2e-08 56_[+2]_23 chrXVI:560016-560529 2.2e-08 41_[+2]_38 chrXIII:352068-352539 2.2e-08 31_[-2]_48 chrVIII:358263-358783 2.2e-08 70_[+2]_9 chrVIII:237746-238144 2.2e-08 18_[+2]_61 chrVI:157698-158278 2.2e-08 43_[+2]_36 chrII:36172-36590 2.2e-08 71_[-2]_8 chrXII:605128-605648 2.5e-08 68_[+2]_11 chrXIII:586394-586931 3.3e-08 71_[+2]_8 chrXII:687657-688162 3.3e-08 47_[+2]_32 chrXI:379454-379909 3.3e-08 53_[-2]_26 chrXI:307998-308429 3.3e-08 28_[+2]_51 chrVIII:85107-85569 3.3e-08 57_[+2]_22 chrVII:823239-823707 3.3e-08 63_[-2]_16 chrVII:412104-412591 3.3e-08 44_[+2]_35 chrXII:628052-628789 7.1e-08 17_[-2]_62 chrIV:1461486-1462090 7.1e-08 65_[+2]_14 chrI:180906-181454 7.1e-08 15_[-2]_64 chrXV:340132-340577 8e-08 41_[+2]_38 chrXI:490735-491292 8e-08 9_[-2]_70 chrX:233660-234304 8e-08 11_[-2]_68 chrXIII:837702-838259 2e-07 2_[-2]_77 chrXIII:168593-169043 2e-07 31_[-2]_48 chrX:353953-354525 2e-07 59_[-2]_20 chrVI:210443-210915 2e-07 52_[+2]_27 chrVI:167230-167693 2e-07 30_[-2]_49 chrVII:700154-701269 2.9e-07 18_[-2]_61 chrX:422646-423282 5.2e-07 27_[-2]_52 chrX:390837-391327 5.2e-07 57_[+2]_22 chrIV:1175586-1176082 5.2e-07 49_[-2]_30 chrXIII:923198-924383 6.7e-07 31_[+2]_48 chrXVI:860151-860639 7.3e-07 38_[-2]_41 chrXVI:572010-572564 7.3e-07 36_[-2]_43 chrXV:281875-282527 7.3e-07 17_[-2]_62 chrXV:226411-226899 7.3e-07 50_[+2]_29 chrXIII:183646-184184 7.3e-07 77_[+2]_2 chrVII:930760-931223 7.3e-07 56_[+2]_23 chrVII:845424-845908 7.3e-07 37_[-2]_42 chrVI:162017-162448 7.3e-07 50_[-2]_29 chrIV:992581-993063 7.3e-07 64_[-2]_15 chrIV:83300-83804 7.3e-07 50_[-2]_29 chrXII:11021-11996 7.9e-07 74_[+2]_5 chrIV:1256866-1257284 1.4e-06 28_[+2]_51 chrXV:110833-111276 1.8e-06 3_[+2]_76 chrXI:0-1049 1.8e-06 79_[-2] chrVII:779392-779913 1.8e-06 18_[-2]_61 chrXIII:463306-463902 2.5e-06 4_[-2]_75 chrXI:513175-513640 2.5e-06 20_[+2]_59 chrX:374193-374828 2.5e-06 9_[+2]_70 chrX:355139-355732 2.5e-06 75_[-2]_4 chrX:204467-205002 2.5e-06 55_[-2]_24 chrVII:544386-544915 2.5e-06 22_[+2]_57 chrVII:531417-531777 2.5e-06 67_[-2]_12 chrIX:438678-439886 2.5e-06 68_[+2]_11 chrIX:336125-336651 2.5e-06 56_[+2]_23 chrIX:324146-324608 2.5e-06 21_[+2]_58 chrIV:1524085-1525652 2.5e-06 39_[+2]_40 chrIV:568680-569319 2.5e-06 19_[-2]_60 chrII:405627-406360 2.5e-06 21_[-2]_58 chrI:229196-230194 2.5e-06 [+2]_79 chrI:4-1131 2.5e-06 30_[-2]_49 chrXII:489292-489566 2.7e-06 16_[-2]_63 chrXII:448471-448980 2.7e-06 20_[+2]_59 chrVIII:134057-134628 2.7e-06 33_[-2]_46 chrV:130822-131434 2.7e-06 49_[+2]_30 chrIV:802532-803025 2.7e-06 48_[+2]_31 chrIV:644944-645399 2.7e-06 77_[+2]_2 chrIV:520712-521293 2.7e-06 24_[-2]_55 chrIII:168111-168620 2.7e-06 31_[+2]_48 chrII:350546-351156 2.7e-06 30_[-2]_49 chrXIV:783371-784324 9e-06 26_[-2]_53 chrXIV:96023-96617 1e-05 50_[-2]_29 chrXV:842365-843039 1.3e-05 57_[-2]_22 chrII:477092-477785 1.3e-05 49_[-2]_30 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRVRCYAHV MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SSCTYWAMCMACTRVRCYAHV width=21 seqs=128 chrXVI:880118-880587 ( 42) GCCTTAACCAACTGGGCCAAG 1 chrXVI:819309-819857 ( 1) GCCTTAACCAACTGGGCCAAG 1 chrXIV:602104-602531 ( 50) GCCTTAACCAACTGGGCCAAG 1 chrXIV:569665-570151 ( 57) GCCTTAACCAACTGGGCCAAG 1 chrXII:1051876-1052385 ( 39) GCCTTAACCAACTGGGCCAAG 1 chrVII:738863-739407 ( 42) GCCTTAACCAACTGGGCCAAG 1 chrV:551126-551573 ( 34) GCCTTAACCAACTGGGCCAAG 1 chrV:443038-443501 ( 31) GCCTTAACCAACTGGGCCAAG 1 chrIX:183290-183715 ( 36) GCCTTAACCAACTGGGCCAAG 1 chrXV:854013-854449 ( 53) CGCGCTACCAACTGCGCCATG 1 chrXII:214659-215163 ( 69) CGCGCTACCAACTGCGCCATG 1 chrI:166032-166588 ( 12) CGCGCTACCAACTGCGCCATG 1 chrXIII:258996-259494 ( 19) CGCCTTAACCACTCGGCCAAG 1 chrXII:167729-168287 ( 42) CGCCTTAACCACTCGGCCAAG 1 chrX:523826-524329 ( 41) CGCCTTAACCACTCGGCCAAG 1 chrVIII:132776-133422 ( 33) CGCCTTAACCACTCGGCCAAG 1 chrIV:980763-981264 ( 67) CGCCTTAACCACTCGGCCAAG 1 chrI:182340-182792 ( 62) CGCCTTAACCACTCGGCCAAG 1 chrXII:875209-875620 ( 17) CGCTCTACCAACTGAGCTAAC 1 chrVII:115226-115783 ( 39) CGCTCTACCAACTGAGCTAAC 1 chrIV:359365-359837 ( 31) CGCTCTACCAACTGAGCTAAC 1 chrXIII:768188-768629 ( 58) CGCGCTACCGACTACGCCACA 1 chrX:197160-197617 ( 22) CGCGCTACCGACTACGCCACA 1 chrVII:774070-774612 ( 63) CGCGCTACCGACTACGCCACA 1 chrVI:204812-205205 ( 13) CGCGCTACCGACTACGCCACA 1 chrIV:410173-410665 ( 15) CGCGCTACCGACTACGCCACA 1 chrV:288174-288863 ( 31) CGCCTTAACCACTCGGCCATA 1 chrIII:227761-228204 ( 15) CGCCTTAACCACTCGGCCATA 1 chrXII:731903-732267 ( 60) GCCTTAAACCACTCGGCCAAA 1 chrXIV:725903-726422 ( 80) GCCTTAGACCACTCGGCCAAC 1 chrXI:83949-84443 ( 67) GCCTTAGACCACTCGGCCAAC 1 chrX:424292-424743 ( 23) GCCTTAGACCACTCGGCCAAC 1 chrIV:519553-519949 ( 47) GCCTTAGACCACTCGGCCAAC 1 chrXV:274464-274989 ( 2) CGCCTTAACCACTCGGCCACT 1 chrXVI:810452-810890 ( 60) GCCTTAACCAACTTGGCCATG 1 chrXV:487220-487713 ( 28) GCCTTAACCAACTTGGCCATG 1 chrXV:228106-228625 ( 21) GCCTTAACCAACTTGGCCATG 1 chrXIV:632396-632901 ( 6) GCCTTAACCAACTTGGCCATG 1 chrXIV:102484-103022 ( 18) GCCTTAACCAACTTGGCCATG 1 chrXII:975763-976245 ( 77) GCCTTAACCAACTTGGCCATG 1 chrVII:730940-731412 ( 16) GCCTTAACCAACTTGGCCATG 1 chrIII:127513-127918 ( 56) GCCTTAACCAACTTGGCCATG 1 chrXV:113578-114006 ( 65) CGCCTTACCAACTTGGCCATA 1 chrXIV:104578-105116 ( 13) CGCCTTACCAACTTGGCCATA 1 chrIX:174807-175259 ( 53) CGCCTTACCAACTTGGCCATA 1 chrIV:434013-434557 ( 76) CGCCTTACCAACTTGGCCATA 1 chrXIV:374669-375122 ( 29) CGCTCTCCCAACTGAGCTAAG 1 chrIV:1095137-1095677 ( 79) CGCTCTCCCAACTGAGCTAAG 1 chrXVI:581810-582330 ( 47) CGCGCTACCGATTGCGCCAAC 1 chrXIII:480354-480924 ( 79) CGCGCTACCGATTGCGCCAAC 1 chrX:414778-415250 ( 7) CGCGCTACCGATTGCGCCAAC 1 chrVII:122061-122576 ( 6) CGCGCTACCGATTGCGCCAAC 1 chrVI:226556-226928 ( 43) CGCGCTACCGATTGCGCCAAC 1 chrIV:1352326-1352734 ( 33) CGCGCTACCGATTGCGCCAAC 1 chrXVI:622327-622871 ( 57) CGCTCTCCCAACTGAGCTAAA 1 chrXVI:560016-560529 ( 42) CGCTCTCCCAACTGAGCTAAA 1 chrXIII:352068-352539 ( 32) CGCTCTCCCAACTGAGCTAAA 1 chrVIII:358263-358783 ( 71) CGCTCTCCCAACTGAGCTAAA 1 chrVIII:237746-238144 ( 19) CGCTCTCCCAACTGAGCTAAA 1 chrVI:157698-158278 ( 44) CGCTCTCCCAACTGAGCTAAA 1 chrII:36172-36590 ( 72) CGCTCTCCCAACTGAGCTAAA 1 chrXII:605128-605648 ( 69) AGCTCTAACCACTGAGCTACA 1 chrXIII:586394-586931 ( 72) GCCATAACCGACTAGACCACG 1 chrXII:687657-688162 ( 48) GCCATAACCGACTAGACCACG 1 chrXI:379454-379909 ( 54) GCCATAACCGACTAGACCACG 1 chrXI:307998-308429 ( 29) GCCATAACCGACTAGACCACG 1 chrVIII:85107-85569 ( 58) GCCATAACCGACTAGACCACG 1 chrVII:823239-823707 ( 64) GCCATAACCGACTAGACCACG 1 chrVII:412104-412591 ( 45) GCCATAACCGACTAGACCACG 1 chrXII:628052-628789 ( 18) GCCTTAGACCGCTCGGCCAAA 1 chrIV:1461486-1462090 ( 66) GCCTTAGACCGCTCGGCCAAA 1 chrI:180906-181454 ( 16) GCCTTAGACCGCTCGGCCAAA 1 chrXV:340132-340577 ( 42) CGCCGTGACCATTGGGCCACG 1 chrXI:490735-491292 ( 10) CGCCGTGACCATTGGGCCACG 1 chrX:233660-234304 ( 12) CGCCGTGACCATTGGGCCACG 1 chrXIII:837702-838259 ( 3) CCTTAAACCAACTTGGCTACC 1 chrXIII:168593-169043 ( 32) CCTTAAACCAACTTGGCTACC 1 chrX:353953-354525 ( 60) CCTTAAACCAACTTGGCTACC 1 chrVI:210443-210915 ( 53) CCTTAAACCAACTTGGCTACC 1 chrVI:167230-167693 ( 31) CCTTAAACCAACTTGGCTACC 1 chrVII:700154-701269 ( 19) GCCTTAGACCACTCGGCCAGA 1 chrX:422646-423282 ( 28) CGCTCTTCCTACTGAGCTACT 1 chrX:390837-391327 ( 58) CGCTCTTCCTACTGAGCTACT 1 chrIV:1175586-1176082 ( 50) CGCTCTTCCTACTGAGCTACT 1 chrXIII:923198-924383 ( 32) GGTATAGACCACTGAGGCAAG 1 chrXVI:860151-860639 ( 39) GGATTTTACCACTAAACCACT 1 chrXVI:572010-572564 ( 37) GGATTTTACCACTAAACCACT 1 chrXV:281875-282527 ( 18) GGATTTTACCACTAAACCACT 1 chrXV:226411-226899 ( 51) GGATTTTACCACTAAACCACT 1 chrXIII:183646-184184 ( 78) GGATTTTACCACTAAACCACT 1 chrVII:930760-931223 ( 57) GGATTTTACCACTAAACCACT 1 chrVII:845424-845908 ( 38) GGATTTTACCACTAAACCACT 1 chrVI:162017-162448 ( 51) GGATTTTACCACTAAACCACT 1 chrIV:992581-993063 ( 65) GGATTTTACCACTAAACCACT 1 chrIV:83300-83804 ( 51) GGATTTTACCACTAAACCACT 1 chrXII:11021-11996 ( 75) CCCATATCCAACTCCACTACC 1 chrIV:1256866-1257284 ( 29) AATTCTAACCACTGAACCACT 1 chrXV:110833-111276 ( 4) GATGATAACCACTACACTAAC 1 chrXI:0-1049 ( 80) GGTATAAACCGCTGAGGCAAG 1 chrVII:779392-779913 ( 19) GATGATAACCACTACACTAAC 1 chrXIII:463306-463902 ( 5) CATTCTGACCATTAAACTATC 1 chrXI:513175-513640 ( 21) CATTCTGACCATTAAACTATC 1 chrX:374193-374828 ( 10) CATTCTGACCATTAAACTATC 1 chrX:355139-355732 ( 76) CATTCTGACCATTAAACTATC 1 chrX:204467-205002 ( 56) CATTCTGACCATTAAACTATC 1 chrVII:544386-544915 ( 23) CATTCTGACCATTAAACTATC 1 chrVII:531417-531777 ( 68) CATTCTGACCATTAAACTATC 1 chrIX:438678-439886 ( 69) GGTATAGACCGCTGAGGCAAG 1 chrIX:336125-336651 ( 57) CATTCTGACCATTAAACTATC 1 chrIX:324146-324608 ( 22) CATTCTGACCATTAAACTATC 1 chrIV:1524085-1525652 ( 40) GGTATAGACCGCTGAGGCAAG 1 chrIV:568680-569319 ( 20) CATTCTGACCATTAAACTATC 1 chrII:405627-406360 ( 22) CATTCTGACCATTAAACTATC 1 chrI:229196-230194 ( 1) GGTATAGACCGCTGAGGCAAG 1 chrI:4-1131 ( 31) GGTATAGACCGCTGAGGCAAG 1 chrXII:489292-489566 ( 17) GCTCTTACCAGCTTAACTACA 1 chrXII:448471-448980 ( 21) AGTGATAACCACTACACTATA 1 chrVIII:134057-134628 ( 34) AGTGATAACCACTACACTATA 1 chrV:130822-131434 ( 50) AGTGATAACCACTACACTATA 1 chrIV:802532-803025 ( 49) AGTGATAACCACTACACTATA 1 chrIV:644944-645399 ( 78) AGTGATAACCACTACACTATA 1 chrIV:520712-521293 ( 25) AGTGATAACCACTACACTATA 1 chrIII:168111-168620 ( 32) AGTGATAACCACTACACTATA 1 chrII:350546-351156 ( 31) AGTGATAACCACTACACTATA 1 chrXIV:783371-784324 ( 27) CCCATATCCAACCCCACTACC 1 chrXIV:96023-96617 ( 51) CGTCATTACAGTTACACCATC 1 chrXV:842365-843039 ( 58) GCCTTAGCTGACTACAGCACA 1 chrII:477092-477785 ( 50) GATGGAACCAATTTAGCTATA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRVRCYAHV MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 46640 bayes= 10.2451 E= 8.9e-316 -200 142 117 -1364 -142 81 157 -1364 -200 177 -1364 -15 -142 -41 6 81 -132 81 -258 72 26 -1364 -1364 100 91 -141 22 -132 61 148 -1364 -1364 -1364 241 -1364 -532 20 132 -34 -374 156 -1364 -126 -1364 -1364 214 -1364 -86 -1364 -458 -1364 167 17 -26 88 -107 20 22 117 -1364 14 -1364 181 -1364 -1364 234 -178 -1364 -1364 177 -1364 20 168 -1364 -1364 -1364 29 74 -458 -7 -19 50 88 -142 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRVRCYAHV MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 128 E= 8.9e-316 0.078125 0.500000 0.421875 0.000000 0.117188 0.328125 0.554688 0.000000 0.078125 0.640625 0.000000 0.281250 0.117188 0.140625 0.195312 0.546875 0.125000 0.328125 0.031250 0.515625 0.375000 0.000000 0.000000 0.625000 0.585938 0.070312 0.218750 0.125000 0.476562 0.523438 0.000000 0.000000 0.000000 0.992188 0.000000 0.007812 0.359375 0.468750 0.148438 0.023438 0.921875 0.000000 0.078125 0.000000 0.000000 0.828125 0.000000 0.171875 0.000000 0.007812 0.000000 0.992188 0.351562 0.156250 0.343750 0.148438 0.359375 0.218750 0.421875 0.000000 0.343750 0.000000 0.656250 0.000000 0.000000 0.945312 0.054688 0.000000 0.000000 0.640625 0.000000 0.359375 1.000000 0.000000 0.000000 0.000000 0.382812 0.312500 0.007812 0.296875 0.273438 0.265625 0.343750 0.117188 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRVRCYAHV MEME-2 regular expression -------------------------------------------------------------------------------- [CG][GC][CT]T[TC][TA][AG][CA]C[CA]ACT[AG][GAC][GA]C[CT]A[ACT][GAC] -------------------------------------------------------------------------------- Time 626.37 secs. ******************************************************************************** ******************************************************************************** MOTIF TRTARYGGYTAKYACAYMWCGYTBTSRCCG MEME-3 width = 30 sites = 14 llr = 428 E-value = 6.3e-070 ******************************************************************************** -------------------------------------------------------------------------------- Motif TRTARYGGYTAKYACAYMWCGYTBTSRCCG MEME-3 Description -------------------------------------------------------------------------------- Simplified A :4:a5:::::a::a:9:46:::::1:61:: pos.-specific C :::::6::6:::6:9146:a14:216:99: probability G :6::5:aa:::4:::1::1:9::4:44:1a matrix T a:a::4::4a:64:1:614::6a49::::: bits 2.4 ** * * 2.2 ** * * 1.9 ** * ** *** 1.7 * ** ** ** ** ** * *** Relative 1.4 * ** ** ** ** ** * * *** Entropy 1.2 **** ****** *** ** * * *** (44.2 bits) 1.0 ***************** **** ****** 0.7 ****************** **** ****** 0.5 ****************************** 0.2 ****************************** 0.0 ------------------------------ Multilevel TGTAACGGCTATCACATCACGTTTTCACCG consensus A GT T GT CAT C G GG sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRTARYGGYTAKYACAYMWCGYTBTSRCCG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chrXIII:290528-291164 + 15 1.33e-17 TCCGATATAG TGTAACGGCTATCACATCACGCTTTCACCG TGGAGACCGG chrVII:541618-542179 + 12 1.33e-17 TCCGATATAG TGTAACGGCTATCACATCACGCTTTCACCG TGGAGACCGG chrVII:401335-401778 - 53 1.33e-17 TCCGATATAG TGTAACGGCTATCACATCACGCTTTCACCG TGGAGACCGG chrV:487075-487642 - 55 1.33e-17 TCCGATATAG TGTAACGGCTATCACATCACGCTTTCACCG TGGAGACCGG chrIX:370218-370623 + 57 1.33e-17 TCCGATATAG TGTAACGGCTATCACATCACGCTTTCACCG TGGAGACCGG chrIX:197386-197801 + 59 3.81e-17 TCCGATGTAG TGTAACGGCTATCACATCACGTTCTCACCG TGGAGACCGG chrIV:1016963-1017513 - 51 3.81e-17 TCCGATGTAG TGTAACGGCTATCACATCACGTTCTCACCG TGGAGACCGG chrXIII:362821-363354 + 37 3.21e-14 GCCATCTTAG TATAGTGGTTAGTACACATCGTTGTGGCCG ATGAAACCCT chrXI:313163-313684 - 60 3.21e-14 GCCATCTTAG TATAGTGGTTAGTACACATCGTTGTGGCCG ATGAAACCCT chrVIII:62470-63028 + 66 3.21e-14 GCCATCTTAG TATAGTGGTTAGTACACATCGTTGTGGCCG ATGAA chrVII:110408-110935 - 36 3.21e-14 GCCATCTTAG TATAGTGGTTAGTACACATCGTTGTGGCCG ATGAAACCCT chrV:434385-434776 - 43 3.21e-14 GCCATCTTAG TATAGTGGTTAGTACACATCGTTGTGGCCG ATGAAACCCT chrIV:1075290-1075767 - 27 1.38e-12 GTTCCAATAG TGTAGCGGCTATCACGTTGCCTTCACACGG CAAAGGTCCC chrXIV:96023-96617 - 3 5.02e-12 GGGCGGTTAG TGTAGTGGTTATCATCCCACCCTTCCAAGG TG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRTARYGGYTAKYACAYMWCGYTBTSRCCG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIII:290528-291164 1.3e-17 14_[+3]_56 chrVII:541618-542179 1.3e-17 11_[+3]_59 chrVII:401335-401778 1.3e-17 52_[-3]_18 chrV:487075-487642 1.3e-17 54_[-3]_16 chrIX:370218-370623 1.3e-17 56_[+3]_14 chrIX:197386-197801 3.8e-17 58_[+3]_12 chrIV:1016963-1017513 3.8e-17 50_[-3]_20 chrXIII:362821-363354 3.2e-14 36_[+3]_34 chrXI:313163-313684 3.2e-14 59_[-3]_11 chrVIII:62470-63028 3.2e-14 65_[+3]_5 chrVII:110408-110935 3.2e-14 35_[-3]_35 chrV:434385-434776 3.2e-14 42_[-3]_28 chrIV:1075290-1075767 1.4e-12 26_[-3]_44 chrXIV:96023-96617 5e-12 2_[-3]_68 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRTARYGGYTAKYACAYMWCGYTBTSRCCG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TRTARYGGYTAKYACAYMWCGYTBTSRCCG width=30 seqs=14 chrXIII:290528-291164 ( 15) TGTAACGGCTATCACATCACGCTTTCACCG 1 chrVII:541618-542179 ( 12) TGTAACGGCTATCACATCACGCTTTCACCG 1 chrVII:401335-401778 ( 53) TGTAACGGCTATCACATCACGCTTTCACCG 1 chrV:487075-487642 ( 55) TGTAACGGCTATCACATCACGCTTTCACCG 1 chrIX:370218-370623 ( 57) TGTAACGGCTATCACATCACGCTTTCACCG 1 chrIX:197386-197801 ( 59) TGTAACGGCTATCACATCACGTTCTCACCG 1 chrIV:1016963-1017513 ( 51) TGTAACGGCTATCACATCACGTTCTCACCG 1 chrXIII:362821-363354 ( 37) TATAGTGGTTAGTACACATCGTTGTGGCCG 1 chrXI:313163-313684 ( 60) TATAGTGGTTAGTACACATCGTTGTGGCCG 1 chrVIII:62470-63028 ( 66) TATAGTGGTTAGTACACATCGTTGTGGCCG 1 chrVII:110408-110935 ( 36) TATAGTGGTTAGTACACATCGTTGTGGCCG 1 chrV:434385-434776 ( 43) TATAGTGGTTAGTACACATCGTTGTGGCCG 1 chrIV:1075290-1075767 ( 27) TGTAGCGGCTATCACGTTGCCTTCACACGG 1 chrXIV:96023-96617 ( 3) TGTAGTGGTTATCATCCCACCCTTCCAAGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRTARYGGYTAKYACAYMWCGYTBTSRCCG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 41393 bayes= 10.5083 E= 6.3e-070 -1045 -1045 -1045 168 19 -1045 178 -1045 -1045 -1045 -1045 168 168 -1045 -1045 -1045 68 -1045 142 -1045 -1045 161 -1045 45 -1045 -1045 242 -1045 -1045 -1045 242 -1045 -1045 161 -1045 45 -1045 -1045 -1045 168 168 -1045 -1045 -1045 -1045 -1045 93 104 -1045 178 -1045 19 168 -1045 -1045 -1045 -1045 231 -1045 -213 145 -139 -139 -1045 -1045 119 -1045 87 19 161 -1045 -213 87 -1045 -139 19 -1045 242 -1045 -1045 -1045 -39 219 -1045 -1045 119 -1045 87 -1045 -1045 -1045 168 -1045 19 93 45 -213 -139 -1045 145 -1045 178 93 -1045 104 -1045 93 -1045 -213 231 -1045 -1045 -1045 219 -39 -1045 -1045 -1045 242 -1045 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRTARYGGYTAKYACAYMWCGYTBTSRCCG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 14 E= 6.3e-070 0.000000 0.000000 0.000000 1.000000 0.357143 0.000000 0.642857 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.500000 0.000000 0.000000 0.571429 0.000000 0.428571 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.571429 0.000000 0.428571 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.357143 0.642857 0.000000 0.642857 0.000000 0.357143 1.000000 0.000000 0.000000 0.000000 0.000000 0.928571 0.000000 0.071429 0.857143 0.071429 0.071429 0.000000 0.000000 0.428571 0.000000 0.571429 0.357143 0.571429 0.000000 0.071429 0.571429 0.000000 0.071429 0.357143 0.000000 1.000000 0.000000 0.000000 0.000000 0.142857 0.857143 0.000000 0.000000 0.428571 0.000000 0.571429 0.000000 0.000000 0.000000 1.000000 0.000000 0.214286 0.357143 0.428571 0.071429 0.071429 0.000000 0.857143 0.000000 0.642857 0.357143 0.000000 0.642857 0.000000 0.357143 0.000000 0.071429 0.928571 0.000000 0.000000 0.000000 0.857143 0.142857 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRTARYGGYTAKYACAYMWCGYTBTSRCCG MEME-3 regular expression -------------------------------------------------------------------------------- T[GA]TA[AG][CT]GG[CT]TA[TG][CT]ACA[TC][CA][AT]CG[TC]T[TGC]T[CG][AG]CCG -------------------------------------------------------------------------------- Time 908.02 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrI:4-1131 7.11e-03 30_[-2(2.54e-06)]_49 chrI:28314-29063 6.59e-01 100 chrI:71749-74244 5.52e-01 100 chrI:81902-82279 2.30e-02 100 chrI:138886-139356 4.43e-01 100 chrI:141585-141940 9.79e-01 100 chrI:166032-166588 3.88e-16 11_[-2(2.36e-10)]_15_[+1(2.82e-11)]_\ 29 chrI:180906-181454 2.70e-04 15_[-2(7.11e-08)]_64 chrI:182340-182792 7.44e-08 13_[-1(7.05e-05)]_24_[+2(3.02e-10)]_\ 18 chrI:229196-230194 6.26e-03 [+2(2.54e-06)]_79 chrII:9368-9961 5.57e-04 26_[-1(1.86e-07)]_50 chrII:36172-36590 7.77e-05 71_[-2(2.16e-08)]_8 chrII:44958-45334 8.35e-01 100 chrII:60230-61281 6.55e-01 100 chrII:87938-88577 9.86e-02 62_[-1(8.63e-05)]_14 chrII:88931-89996 1.84e-01 100 chrII:135924-136316 4.59e-01 100 chrII:165057-165823 3.42e-01 100 chrII:167545-169629 2.27e-02 36_[+1(1.82e-05)]_40 chrII:181332-181632 4.10e-01 100 chrII:197226-197882 3.23e-07 31_[+1(3.32e-11)]_45 chrII:226862-228014 9.25e-01 100 chrII:265999-266660 3.90e-01 100 chrII:292100-292771 3.48e-01 100 chrII:326527-327249 2.97e-02 100 chrII:332265-333535 8.84e-01 100 chrII:342492-342952 8.65e-01 100 chrII:347402-347914 5.69e-04 52_[-1(1.86e-07)]_24 chrII:350546-351156 1.51e-13 35_[+3(4.29e-07)]_[+1(5.39e-11)]_11 chrII:373080-375793 8.12e-01 100 chrII:391440-391783 7.67e-01 100 chrII:405627-406360 2.27e-08 21_[-2(2.54e-06)]_14_[+1(2.50e-08)]_\ 20 chrII:415514-415913 4.42e-01 100 chrII:477092-477785 1.13e-02 49_[-2(1.28e-05)]_30 chrII:478975-479440 9.81e-01 100 chrII:504497-504700 2.25e-01 100 chrII:592311-593295 7.04e-02 21_[-2(5.83e-05)]_58 chrII:604085-607129 8.56e-01 100 chrII:642879-643340 5.01e-01 100 chrII:644970-645571 6.78e-01 100 chrII:792375-792884 3.93e-01 100 chrII:798657-799131 4.79e-01 100 chrII:812990-813183 1.23e-01 100 chrIII:2-1610 5.07e-01 100 chrIII:29599-31178 5.01e-01 100 chrIII:82361-82764 7.87e-01 100 chrIII:123365-123805 2.77e-10 49_[-1(9.61e-15)]_27 chrIII:127513-127918 4.15e-05 55_[-2(3.69e-09)]_24 chrIII:142063-143110 7.78e-01 100 chrIII:163472-163891 2.12e-01 100 chrIII:168111-168620 2.47e-07 17_[-3(4.29e-07)]_53 chrIII:177075-178829 6.03e-01 100 chrIII:227761-228204 1.53e-05 14_[-2(1.74e-09)]_65 chrIII:294905-295898 7.66e-02 100 chrIII:315624-316618 8.37e-01 100 chrIV:16-365 5.87e-02 100 chrIV:83300-83804 9.89e-06 2_[+3(1.68e-05)]_18_[-2(7.29e-07)]_\ 29 chrIV:116776-118221 6.19e-01 100 chrIV:129661-131022 7.20e-01 100 chrIV:159071-159633 6.80e-01 100 chrIV:217023-218083 3.58e-01 100 chrIV:221127-222366 4.00e-01 100 chrIV:229395-230987 4.92e-01 100 chrIV:308004-310181 9.13e-01 100 chrIV:321619-321950 6.71e-01 100 chrIV:340165-341687 9.90e-01 100 chrIV:358034-358492 7.54e-01 100 chrIV:359365-359837 8.34e-06 30_[-2(7.59e-10)]_49 chrIV:385710-387842 8.11e-01 100 chrIV:410173-410665 1.17e-12 14_[-2(1.42e-09)]_15_[+1(1.79e-09)]_\ 26 chrIV:410969-411636 1.34e-01 100 chrIV:434013-434557 1.10e-10 36_[-1(2.51e-09)]_15_[+2(6.22e-09)]_\ 4 chrIV:437526-438223 8.41e-01 100 chrIV:443790-444431 9.62e-01 100 chrIV:465227-465555 7.04e-01 100 chrIV:488430-489145 8.25e-07 67_[-1(1.34e-10)]_9 chrIV:490422-491274 8.88e-01 100 chrIV:508150-510306 5.61e-01 100 chrIV:519553-519949 4.05e-06 46_[-2(2.55e-09)]_33 chrIV:520712-521293 1.51e-13 29_[+3(4.29e-07)]_[+1(5.39e-11)]_17 chrIV:540864-541964 3.00e-01 100 chrIV:568680-569319 2.27e-08 19_[-2(2.54e-06)]_14_[+1(2.50e-08)]_\ 22 chrIV:579002-580788 1.95e-01 100 chrIV:599765-600121 3.52e-01 100 chrIV:619646-620265 7.98e-06 71_[-1(8.88e-09)]_5 chrIV:644944-645399 1.51e-13 39_[-1(5.39e-11)]_[-3(4.29e-07)]_7 chrIV:667734-668257 5.85e-07 69_[-1(3.32e-11)]_7 chrIV:802532-803025 1.51e-13 10_[-1(5.39e-11)]_[-3(4.29e-07)]_9_\ [+1(5.34e-05)]_3 chrIV:835777-836247 8.44e-01 100 chrIV:884184-884659 5.32e-01 100 chrIV:946124-946617 5.77e-04 48_[+1(2.30e-07)]_28 chrIV:975929-976742 5.87e-01 100 chrIV:980763-981264 7.04e-08 18_[-1(7.05e-05)]_24_[+2(3.02e-10)]_\ 13 chrIV:992581-993063 4.67e-04 64_[-2(7.29e-07)]_15 chrIV:1012644-1013941 7.76e-01 100 chrIV:1016963-1017513 3.48e-20 26_[-1(1.16e-10)]_[-3(3.81e-17)]_20 chrIV:1062659-1063123 6.88e-01 100 chrIV:1075290-1075767 1.81e-17 1_[-1(2.82e-11)]_1_[-3(1.38e-12)]_\ 44 chrIV:1095137-1095677 9.61e-10 20_[-1(1.58e-08)]_34_[+2(8.65e-09)]_\ 1 chrIV:1150376-1151189 9.63e-01 100 chrIV:1166217-1166891 3.40e-01 100 chrIV:1175586-1176082 5.11e-04 49_[-2(5.16e-07)]_30 chrIV:1201476-1202661 1.32e-01 100 chrIV:1213234-1213959 5.34e-01 100 chrIV:1233677-1234290 4.01e-01 100 chrIV:1236431-1238726 9.83e-01 100 chrIV:1256866-1257284 3.34e-05 28_[+2(1.37e-06)]_51 chrIV:1300446-1301339 8.81e-01 100 chrIV:1305394-1306235 3.59e-01 100 chrIV:1344937-1345724 9.60e-01 100 chrIV:1352326-1352734 1.07e-04 32_[+2(1.39e-08)]_47 chrIV:1355719-1356034 7.74e-01 100 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31_[-2(1.97e-07)]_48 chrXIII:183646-184184 2.07e-11 40_[-1(1.68e-11)]_13_[+2(7.29e-07)]_\ 2 chrXIII:195907-196401 3.98e-03 40_[+2(1.37e-06)]_39 chrXIII:224077-224435 8.85e-01 100 chrXIII:225320-226694 1.18e-01 100 chrXIII:258996-259494 1.87e-06 18_[+2(3.02e-10)]_61 chrXIII:267594-268847 8.06e-01 100 chrXIII:290181-290355 2.94e-01 100 chrXIII:290528-291164 2.09e-21 14_[+3(1.33e-17)]_[+1(1.16e-10)]_32 chrXIII:296258-298950 6.38e-01 100 chrXIII:306120-307072 4.89e-01 100 chrXIII:320937-321325 1.86e-05 73_[-1(1.79e-09)]_3 chrXIII:348205-348766 6.85e-01 100 chrXIII:352068-352539 1.40e-04 31_[-2(2.16e-08)]_48 chrXIII:362821-363354 6.32e-15 36_[+3(3.21e-14)]_[+1(1.19e-07)]_10 chrXIII:372185-372728 4.93e-07 46_[-1(1.34e-10)]_30 chrXIII:378952-379621 1.60e-04 74_[-1(4.58e-08)]_2 chrXIII:420312-420897 1.05e-07 41_[-1(1.34e-10)]_35 chrXIII:431822-432513 2.96e-01 100 chrXIII:463306-463902 2.27e-08 4_[-2(2.54e-06)]_14_[+1(2.50e-08)]_\ 37 chrXIII:480354-480924 5.36e-11 39_[-1(6.81e-10)]_15_[+2(1.39e-08)]_\ 1 chrXIII:504670-505238 5.67e-01 100 chrXIII:550852-553238 7.37e-01 100 chrXIII:572709-573306 8.18e-01 100 chrXIII:586394-586931 8.48e-12 31_[-1(1.34e-10)]_16_[+2(3.29e-08)]_\ 8 chrXIII:616044-616444 9.33e-01 100 chrXIII:731838-733577 7.80e-01 100 chrXIII:747763-748160 6.12e-01 100 chrXIII:754423-754944 8.87e-01 100 chrXIII:768188-768629 1.17e-12 18_[-1(1.79e-09)]_15_[+2(1.42e-09)]_\ 22 chrXIII:807644-808548 7.75e-01 100 chrXIII:837702-838259 2.24e-07 2_[-2(1.97e-07)]_31_[+1(2.30e-07)]_\ 22 chrXIII:872682-872973 7.91e-02 100 chrXIII:913696-916233 5.17e-01 100 chrXIII:923198-924383 2.84e-03 31_[+2(6.70e-07)]_48 chrXIV:6489-7178 6.93e-01 100 chrXIV:63113-64578 3.62e-01 100 chrXIV:88599-90089 5.85e-01 100 chrXIV:96023-96617 5.26e-11 2_[-3(5.02e-12)]_18_[-2(1.03e-05)]_\ 29 chrXIV:102484-103022 3.42e-09 17_[-2(3.69e-09)]_16_[+1(1.28e-07)]_\ 22 chrXIV:104578-105116 1.21e-10 12_[-2(6.22e-09)]_15_[+1(2.51e-09)]_\ 28 chrXIV:229392-230766 6.98e-01 100 chrXIV:241382-241750 3.67e-01 100 chrXIV:301004-303943 9.49e-01 100 chrXIV:330398-331097 2.35e-01 100 chrXIV:351605-351792 3.73e-01 100 chrXIV:351990-352977 9.92e-01 100 chrXIV:374669-375122 4.19e-05 28_[-2(8.65e-09)]_51 chrXIV:392387-392694 1.75e-02 7_[-3(9.24e-06)]_63 chrXIV:442799-444816 9.65e-01 100 chrXIV:461531-462458 9.03e-01 100 chrXIV:495198-495632 8.19e-01 100 chrXIV:499256-501411 1.00e+00 100 chrXIV:546943-547416 1.16e-06 35_[+1(7.36e-11)]_41 chrXIV:560171-561132 8.61e-01 100 chrXIV:567893-568493 3.83e-07 42_[+1(7.36e-11)]_34 chrXIV:569665-570151 8.08e-14 16_[-1(3.32e-11)]_16_[+2(1.83e-10)]_\ 23 chrXIV:585435-586564 9.32e-01 100 chrXIV:602104-602531 1.33e-06 [-2(4.60e-05)]_28_[-2(1.83e-10)]_30 chrXIV:619719-620052 5.71e-01 100 chrXIV:631568-632135 5.12e-10 52_[-1(9.61e-15)]_24 chrXIV:632396-632901 2.71e-09 5_[-2(3.69e-09)]_16_[+1(1.28e-07)]_\ 34 chrXIV:725903-726422 1.84e-09 23_[+1(1.86e-07)]_32_[+2(2.55e-09)] chrXIV:739266-739930 7.96e-01 100 chrXIV:771940-772324 8.74e-02 100 chrXIV:783371-784324 1.83e-02 26_[-2(8.98e-06)]_53 chrXV:3-1016 7.03e-01 100 chrXV:24383-25239 4.08e-01 100 chrXV:39999-40674 8.56e-01 100 chrXV:43185-43883 2.71e-01 100 chrXV:79719-80133 8.60e-02 100 chrXV:92127-94820 9.39e-01 100 chrXV:110833-111276 7.77e-03 3_[+2(1.82e-06)]_76 chrXV:113578-114006 5.03e-05 64_[-2(6.22e-09)]_15 chrXV:161087-161415 9.19e-01 100 chrXV:167966-168515 7.01e-03 11_[+3(5.36e-06)]_59 chrXV:216116-216691 2.26e-01 100 chrXV:226411-226899 2.07e-11 13_[-1(1.68e-11)]_13_[+2(7.29e-07)]_\ 29 chrXV:228106-228625 3.42e-09 20_[-2(3.69e-09)]_16_[+1(1.28e-07)]_\ 19 chrXV:232060-232445 3.06e-01 100 chrXV:253796-254117 8.77e-01 100 chrXV:274464-274989 7.47e-07 1_[-2(3.08e-09)]_43_[+1(7.80e-05)]_\ 11 chrXV:281875-282527 2.07e-11 17_[-2(7.29e-07)]_13_[+1(1.68e-11)]_\ 25 chrXV:287730-288412 5.43e-01 100 chrXV:300856-301358 3.98e-03 44_[-2(1.37e-06)]_35 chrXV:340132-340577 2.91e-09 2_[-1(8.88e-09)]_15_[+2(8.03e-08)]_\ 38 chrXV:348728-349297 6.31e-01 100 chrXV:353887-354485 9.49e-01 100 chrXV:382792-383531 6.03e-01 100 chrXV:417038-418134 4.87e-01 100 chrXV:424070-424618 1.75e-01 100 chrXV:438453-438976 1.22e-05 42_[+1(3.13e-09)]_34 chrXV:464243-464776 1.44e-06 60_[+1(7.36e-11)]_16 chrXV:487220-487713 3.42e-09 27_[-2(3.69e-09)]_16_[+1(1.28e-07)]_\ 12 chrXV:505098-505477 5.07e-01 100 chrXV:571515-572217 9.88e-01 100 chrXV:594231-594697 5.87e-01 100 chrXV:663478-664112 9.45e-07 74_[-1(1.34e-10)]_2 chrXV:671109-671433 7.26e-02 100 chrXV:677931-679198 8.31e-01 100 chrXV:710006-710475 4.24e-04 50_[+1(3.95e-07)]_26 chrXV:779698-780980 5.96e-01 100 chrXV:796974-797476 9.96e-01 100 chrXV:842365-843039 1.01e-02 57_[-2(1.28e-05)]_22 chrXV:854013-854449 3.88e-16 13_[-1(2.82e-11)]_15_[+2(2.36e-10)]_\ 27 chrXV:866529-868156 8.49e-01 100 chrXV:882112-882466 5.53e-01 100 chrXV:892244-892597 7.90e-01 100 chrXV:903662-905110 9.97e-01 100 chrXV:911869-912583 8.50e-01 100 chrXV:925199-925429 5.00e-01 100 chrXV:968129-968427 1.62e-01 100 chrXV:976182-976904 6.97e-01 100 chrXV:978820-980006 8.66e-01 100 chrXV:980465-981131 1.08e-06 7_[+1(7.36e-11)]_69 chrXV:1003916-1004951 9.51e-01 100 chrXV:1025705-1026084 4.10e-01 100 chrXV:1027466-1029290 2.78e-01 100 chrXV:1053857-1054530 9.00e-01 100 chrXVI:16957-17263 8.08e-01 100 chrXVI:55846-56527 1.94e-04 40_[-1(4.58e-08)]_36 chrXVI:75432-76749 6.06e-01 100 chrXVI:135530-135836 3.87e-01 100 chrXVI:188510-188964 3.66e-01 100 chrXVI:209646-210586 2.96e-01 100 chrXVI:214904-215932 7.84e-01 100 chrXVI:239154-239564 2.99e-01 100 chrXVI:280573-281903 5.43e-01 100 chrXVI:302628-304265 6.11e-01 100 chrXVI:338647-339146 8.72e-04 9_[-1(3.95e-07)]_67 chrXVI:378659-379019 4.48e-01 100 chrXVI:406193-407789 7.39e-01 100 chrXVI:431758-432105 7.00e-01 100 chrXVI:435636-436374 1.52e-01 100 chrXVI:520131-520525 2.92e-02 100 chrXVI:560016-560529 1.70e-05 41_[+2(2.16e-08)]_16_[+2(6.24e-05)]_\ 1 chrXVI:572010-572564 2.07e-11 36_[-2(7.29e-07)]_13_[+1(1.68e-11)]_\ 6 chrXVI:581810-582330 1.07e-04 46_[-2(1.39e-08)]_33 chrXVI:590995-591356 1.59e-01 100 chrXVI:608212-608610 8.92e-01 100 chrXVI:622327-622871 1.03e-04 56_[+2(2.16e-08)]_23 chrXVI:641212-641482 9.95e-01 100 chrXVI:678881-679441 3.46e-01 100 chrXVI:689359-689885 5.32e-02 100 chrXVI:699897-700717 8.38e-01 100 chrXVI:731621-732310 2.54e-01 100 chrXVI:744045-744667 6.04e-05 17_[+1(1.73e-07)]_59 chrXVI:768939-769513 1.22e-05 38_[-1(3.13e-09)]_38 chrXVI:775659-776177 5.66e-01 100 chrXVI:785320-785990 4.96e-01 100 chrXVI:789642-789983 6.89e-02 100 chrXVI:794463-796078 8.51e-01 100 chrXVI:810452-810890 2.71e-06 59_[-2(3.69e-09)]_20 chrXVI:819309-819857 8.08e-14 [-2(1.83e-10)]_16_[+1(3.32e-11)]_39 chrXVI:856440-857155 7.39e-01 100 chrXVI:860151-860639 2.07e-11 38_[-2(7.29e-07)]_13_[+1(1.68e-11)]_\ 4 chrXVI:880118-880587 8.08e-14 1_[-1(3.32e-11)]_16_[+2(1.83e-10)]_\ 38 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************