******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--AFT2/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrI:3-1066 1.0000 100 chrI:81901-82306 1.0000 100 chrI:138891-139356 1.0000 100 chrI:141580-141935 1.0000 100 chrI:166040-166577 1.0000 100 chrI:180909-181494 1.0000 100 chrI:182324-182795 1.0000 100 chrI:229112-230194 1.0000 100 chrII:6010-7139 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chrXV:464228-464692 1.0000 100 chrXV:487210-487711 1.0000 100 chrXV:505020-505490 1.0000 100 chrXV:571716-572166 1.0000 100 chrXV:594011-594648 1.0000 100 chrXV:619642-624654 1.0000 100 chrXV:639248-639435 1.0000 100 chrXV:663616-664126 1.0000 100 chrXV:677923-679206 1.0000 100 chrXV:710013-710488 1.0000 100 chrXV:759156-759574 1.0000 100 chrXV:762053-762438 1.0000 100 chrXV:778640-779450 1.0000 100 chrXV:779695-780943 1.0000 100 chrXV:832356-832714 1.0000 100 chrXV:842416-842938 1.0000 100 chrXV:853981-854442 1.0000 100 chrXV:866519-868120 1.0000 100 chrXV:877770-877991 1.0000 100 chrXV:900088-901236 1.0000 100 chrXV:901449-901674 1.0000 100 chrXV:925227-925413 1.0000 100 chrXV:968119-968432 1.0000 100 chrXV:976171-976852 1.0000 100 chrXV:978809-979127 1.0000 100 chrXV:980482-981280 1.0000 100 chrXV:1003933-1004979 1.0000 100 chrXV:1025690-1026253 1.0000 100 chrXV:1027802-1029574 1.0000 100 chrXV:1070827-1071220 1.0000 100 chrXVI:55814-56518 1.0000 100 chrXVI:75470-76741 1.0000 100 chrXVI:98485-99152 1.0000 100 chrXVI:135514-135838 1.0000 100 chrXVI:172847-174053 1.0000 100 chrXVI:188581-189174 1.0000 100 chrXVI:209800-210588 1.0000 100 chrXVI:280606-282960 1.0000 100 chrXVI:302551-304238 1.0000 100 chrXVI:338662-339226 1.0000 100 chrXVI:352312-353019 1.0000 100 chrXVI:377936-378460 1.0000 100 chrXVI:378651-379024 1.0000 100 chrXVI:404560-405752 1.0000 100 chrXVI:406199-407778 1.0000 100 chrXVI:435498-436195 1.0000 100 chrXVI:520128-520571 1.0000 100 chrXVI:560001-560509 1.0000 100 chrXVI:572007-572579 1.0000 100 chrXVI:575114-575550 1.0000 100 chrXVI:581821-582482 1.0000 100 chrXVI:622296-622867 1.0000 100 chrXVI:645369-645690 1.0000 100 chrXVI:653813-655004 1.0000 100 chrXVI:689347-689872 1.0000 100 chrXVI:699905-700711 1.0000 100 chrXVI:701861-702406 1.0000 100 chrXVI:718432-719410 1.0000 100 chrXVI:731635-732320 1.0000 100 chrXVI:743953-744660 1.0000 100 chrXVI:768930-769511 1.0000 100 chrXVI:775634-776194 1.0000 100 chrXVI:794443-795812 1.0000 100 chrXVI:810460-810880 1.0000 100 chrXVI:819293-819834 1.0000 100 chrXVI:821672-822096 1.0000 100 chrXVI:856756-857123 1.0000 100 chrXVI:860136-860644 1.0000 100 chrXVI:866335-866758 1.0000 100 chrXVI:880130-880587 1.0000 100 chrXVI:901490-901967 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--AFT2/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--AFT2/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--AFT2/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 589 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 58900 N= 589 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.301 C 0.199 G 0.199 T 0.301 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4741--AFT2/background): A 0.314 C 0.186 G 0.186 T 0.314 ******************************************************************************** ******************************************************************************** MOTIF SGGRRTCGAACCSVKGAYCTYCHGRTT MEME-1 width = 27 sites = 109 llr = 2158 E-value = 1.5e-494 ******************************************************************************** -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYCHGRTT MEME-1 Description -------------------------------------------------------------------------------- Simplified A 12:55:::aa::13127:::122:511 pos.-specific C 4:::2:8:::a7532::5724533211 probability G 57a42::a::::44581:1::127312 matrix T ::::1a2::::21:3:2517423::77 bits 2.4 * * * 2.2 * * * 1.9 * * * 1.7 * * **** Relative 1.5 * ****** * * Entropy 1.2 * ******* * * (28.6 bits) 1.0 **** ******* * ** * 0.7 **** ******** ***** * 0.5 **** **************** **** 0.2 *************************** 0.0 --------------------------- Multilevel GGGAATCGAACCCGGGACCTCCCGATT consensus CA GG T GATATT CTATCG sequence C T C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYCHGRTT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------------- chrXVI:819293-819834 - 53 8.40e-13 TGGTCTCTAG CGGGATCGAACCGCTGATCCCCGCGTT ATTAGCACGG chrXIV:569667-570160 + 14 8.40e-13 TGGTCTCTAG CGGGATCGAACCGCTGATCCCCGCGTT ATTAGCACGG chrXII:734699-735017 - 31 8.40e-13 TGGTCTCTAG CGGGATCGAACCGCTGATCCCCGCGTT ATTAGCACGG chrVII:738890-739392 - 68 8.40e-13 CTCTAG CGGGATCGAACCGCTGATCCCCGCGTT ATTAGCACGG chrV:551054-551592 + 22 8.40e-13 TGGTCTCTAG CGGGATCGAACCGCTGATCCCCGCGTT ATTAGCACGG chrV:443008-443478 + 19 8.40e-13 TGGTCTCTAG CGGGATCGAACCGCTGATCCCCGCGTT ATTAGCACGG chrII:197240-197879 - 22 8.40e-13 TGGTCTCTAG CGGGATCGAACCGCTGATCCCCGCGTT ATTAGCACGG chrIII:123395-123824 + 28 1.71e-12 GGGGCGAGCC GGGACTCGAACCCGGGACCTCCCGCAC CCTAAGCGAG chrXIII:747737-748161 + 3 3.95e-12 AT GGGGGTCGAACCCATAATCTTCTGATT AGAAGTCAGA chrXIII:131507-132122 + 71 3.95e-12 CACTCACGAT GGGGGTCGAACCCATAATCTTCTGATT AGA chrXI:162287-162800 + 4 3.95e-12 GAT GGGGGTCGAACCCATAATCTTCTGATT AGAAGTCAGA chrX:374198-374848 + 43 3.95e-12 CACTCACGAT GGGGGTCGAACCCATAATCTTCTGATT AGAAGTCAGA chrX:355139-355724 - 28 3.95e-12 CACTCACGAT GGGGGTCGAACCCATAATCTTCTGATT AGAAGTCAGA chrVII:736185-736608 - 29 3.95e-12 CACTCACGAT GGGGGTCGAACCCATAATCTTCTGATT AGAAGTCAGA chrVII:405273-405800 - 19 3.95e-12 CACTCACGAT GGGGGTCGAACCCATAATCTTCTGATT AGAAGTCAGA chrIV:568538-569276 - 60 3.95e-12 CACTCACGAT GGGGGTCGAACCCATAATCTTCTGATT AGAAGTCAGA chrXV:853981-854442 + 36 5.43e-12 TGGACGCAAC CGGAATCGAACCGATGACCTCTTCCTT GCAAGGGAAG chrXII:214639-215162 + 43 5.43e-12 TGGACGCAAC CGGAATCGAACCGATGACCTCTTCCTT GCAAGGGAAG chrV:311763-312291 + 56 5.43e-12 TGGACGCAAC CGGAATCGAACCGATGACCTCTTCCTT GCAAGGGAAG chrI:166040-166577 - 45 5.43e-12 TGGACGCAAC CGGAATCGAACCGATGACCTCTTCCTT GCAAGGGAAG chrXI:202815-203333 - 11 8.64e-12 AGCCCTGTAG GGGGCTCGAACCCCTAACCTTATGATT AAGAGTCATA chrX:414735-415266 - 52 8.64e-12 AGCCCTGTAG GGGGCTCGAACCCCTAACCTTATGATT AAGAGTCATA chrVII:876035-876803 - 61 8.64e-12 AGCCCTGTAG GGGGCTCGAACCCCTAACCTTATGATT AAGAGTCATA chrVI:226470-226940 + 43 8.64e-12 AGCCCTGTAG GGGGCTCGAACCCCTAACCTTATGATT AAGAGTCATA chrV:435564-436041 + 10 8.64e-12 GCCCTGTAG GGGGCTCGAACCCCTAACCTTATGATT AAGAGTCATA chrV:135160-135703 + 54 8.64e-12 AGCCCTGTAG GGGGCTCGAACCCCTAACCTTATGATT AAGAGTCATA chrIX:300011-300504 + 31 8.64e-12 AGCCCTGTAG GGGGCTCGAACCCCTAACCTTATGATT AAGAGTCATA chrXI:46548-47031 + 6 2.08e-11 TCTGT GGGAATTGAACCCACGATCCCCGCATT ACGAGTGCGA chrXVI:209800-210588 + 58 2.40e-11 CTCCGATACG GGGAGTCGAACCCCGGTCTCCACGGTG AAAGCGTGAT chrVII:541625-542187 - 29 2.40e-11 CTCCGATACG GGGAGTCGAACCCCGGTCTCCACGGTG AAAGCGTGAT chrV:487092-487650 + 20 2.40e-11 CTCCGATACG GGGAGTCGAACCCCGGTCTCCACGGTG AAAGCGTGAT chrV:176849-177481 - 19 2.40e-11 CTCCGATACG GGGAGTCGAACCCCGGTCTCCACGGTG AAAGCGTGAT chrIX:370205-370683 - 58 2.40e-11 CTCCGATACG GGGAGTCGAACCCCGGTCTCCACGGTG AAAGCGTGAT chrIX:197340-197959 - 28 2.40e-11 CTCCGAAGCG GGGAGTCGAACCCCGGTCTCCACGGTG AGAACGTGAT chrIV:1016955-1017520 + 30 2.40e-11 CTCCGAAGCG GGGAGTCGAACCCCGGTCTCCACGGTG AGAACGTGAT chrXVI:572007-572579 - 60 7.00e-11 TGCGCAAGCC CGGAATCGAACCGGGGGCCCAACGATG GCAACGTTGG chrXV:226353-226918 + 36 7.00e-11 TGCGCAAGCC CGGAATCGAACCGGGGGCCCAACGATG GCAACGTTGG chrX:531541-532182 - 51 7.00e-11 TGCGCAAGCC CGGAATCGAACCGGGGGCCCAACGATG GCAACGTTGG chrVII:930724-931227 + 38 7.00e-11 TGCGCAAGCC CGGAATCGAACCGGGGGCCCAACGATG GCAACGTTGG chrVII:845404-845929 - 67 7.00e-11 GCAAGCC CGGAATCGAACCGGGGGCCCAACGATG GCAACGTTGG chrXV:113515-114247 - 7 1.16e-10 TGCTTCCAAT CGGATTTGAACCGATGATCTCCACATT ACTAGT chrXIV:104568-105129 - 43 1.16e-10 TGCTTCCAAT CGGATTTGAACCGATGATCTCCACATT ACTAGTGTGG chrVIII:115892-116431 + 6 1.16e-10 CCAAT CGGATTTGAACCGATGATCTCCACATT ACTAGTGTGG chrIX:325490-326097 - 41 1.16e-10 TGCTTCCAAT CGGATTTGAACCGATGATCTCCACATT ACTAGTGTGG chrIV:802526-803014 + 21 1.16e-10 AGGTCCTACC CGGATTCGAACCGGGGTTGTCCGGATC AAAACCGAAA chrIV:644938-645388 + 50 1.16e-10 AGGTCCTACC CGGATTCGAACCGGGGTTGTCCGGATC AAAACCGAAA chrIV:520690-521401 - 12 1.16e-10 AGGTCCTACC CGGATTCGAACCGGGGTTGTCCGGATC AAAACCGAAA chrIV:434031-434563 + 27 1.16e-10 TGCTTCCAAT CGGATTTGAACCGATGATCTCCACATT ACTAGTGTGG chrII:350546-351138 - 70 1.16e-10 TACC CGGATTCGAACCGGGGTTGTCCGGATC AAAACCGAAA chrII:266166-266689 - 37 1.16e-10 TGCTTCCAAT CGGATTTGAACCGATGATCTCCACATT ACTAGTGTGG chrXVI:856756-857123 - 49 1.47e-10 TGGACGAGTC CGGAATCGAACCGGAGACCTCTCCCAT GCTAAGGGAG chrXIV:546946-547420 - 27 1.47e-10 GGGGCGAGCT GGGAATTGAACCCAGGGCCTCTCGCAT GCTTTGTCTT chrXIII:320938-321328 + 74 1.47e-10 TGGACGAGTC CGGAATCGAACCGGAGACCTCTCCCAT chrXII:656707-657213 + 34 1.47e-10 TGGACGAGTC CGGAATCGAACCGGAGACCTCTCCCAT GCTAAGGGAG chrX:197098-197616 + 16 1.47e-10 TGGACGAGTC CGGAATCGAACCGGAGACCTCTCCCAT GCTAAGGGAG chrVIII:388663-389230 + 7 1.47e-10 CGAGCT GGGAATTGAACCCAGGGCCTCTCGCAT GCTTTGTCTT chrVII:774108-774622 - 70 1.47e-10 AGTC CGGAATCGAACCGGAGACCTCTCCCAT GCTAAGGGAG chrIV:410175-410704 - 26 1.47e-10 TGGACGAGTC CGGAATCGAACCGGAGACCTCTCCCAT GCTAAGGGAG chrX:538353-538902 - 13 2.10e-10 CGTTCCGTAC GGGACTCGAACCCGCAGTCTTCTCCTT AGGAGGGAGA chrVIII:475482-475908 + 71 2.36e-10 TGTTCCAACC GAGGATCGAACTCGGGACCTTTGCCGT GTG chrV:130814-131422 + 24 2.36e-10 AGGTCTTACC CGGATTCGAACCGGGGTTGTTCGGATC AAAACCGAAA chrIV:1075265-1075781 + 9 2.36e-10 TTCCAACC GAGGATCGAACTCGGGACCTTTGCCGT GTGAAGGCAA chrXIII:420311-420872 + 57 2.97e-10 TGATTTCGCC CAGGATCGAACTGGGGACGTTCTGCGT GTTAAGCAGA chrXIII:372185-372723 + 51 2.97e-10 TGATTTCGCC CAGGATCGAACTGGGGACGTTCTGCGT GTTAAGCAGA chrXII:687648-688161 + 15 2.97e-10 TGATTTCGCC CAGGATCGAACTGGGGACGTTCTGCGT GTTAAGCAGA chrVIII:85103-85573 + 20 2.97e-10 TGATTTCGCC CAGGATCGAACTGGGGACGTTCTGCGT GTTAAGCAGA chrVII:412110-412588 + 5 2.97e-10 CGCC CAGGATCGAACTGGGGACGTTCTGCGT GTTAAGCAGA chrV:469250-469813 - 13 2.97e-10 TGATTTCGCC CAGGATCGAACTGGGGACGTTCTGCGT GTTAAGCAGA chrV:438467-438992 - 58 2.97e-10 TGATTTCGCC CAGGATCGAACTGGGGACGTTCTGCGT GTTAAGCAGA chrIV:488470-489182 + 31 4.15e-10 TGATCCAACC GAGGTTCGAACTCGGGATCTTCGCCGT GTAAAGGCGA chrX:233674-234351 - 13 4.63e-10 CTTCCCCGCC AGGACTCGAACCTGGAATCTCCTGGTT CGTAGCCAGA chrXVI:768930-769511 + 47 5.75e-10 CTCCTCATAG GGGGCTCGAACCCCTGACATTTCGGTA TCCTTGCTTA chrXV:438438-438984 - 41 5.75e-10 CTCCTCATAG GGGGCTCGAACCCCTGACATTTCGGTA TCCTTGCTTA chrXI:578768-579348 - 16 5.75e-10 CTCCTCATAG GGGGCTCGAACCCCTGACATTTCGGTA TCCTTGCTTA chrXV:487210-487711 - 66 1.07e-09 ACCCCAGT GAGGGTTGAACTCACGATCTTGCGATT AACAGTCGCA chrXV:228081-228612 - 72 1.07e-09 GT GAGGGTTGAACTCACGATCTTGCGATT AACAGTCGCA chrXIV:632385-632903 - 42 1.07e-09 CGACCCCAGT GAGGGTTGAACTCACGATCTTGCGATT AACAGTCGCA chrXIV:102492-102972 - 71 1.07e-09 AGT GAGGGTTGAACTCACGATCTTGCGATT AACAGTCGCA chrXII:975780-976262 + 22 1.07e-09 CGACCCCAGT GAGGGTTGAACTCACGATCTTGCGATT AACAGTCGCA chrXI:74383-74979 - 30 1.07e-09 CGACCCCAGT GAGGGTTGAACTCACGATCTTGCGATT AACAGTCGCA chrVII:730941-731437 - 35 1.07e-09 CGACCCCAGT GAGGGTTGAACTCACGATCTTGCGATT AACAGTCGCA chrXIII:837727-838317 - 8 1.59e-09 TCTCCCGGGG GCGAGTCGAACGCCCGATCTCAAGATT TCGTAGT chrVI:210428-210902 + 14 1.59e-09 TCTCCCGGGG GCGAGTCGAACGCCCGATCTCAAGATT TCGTAGTGGT chrVI:167238-167700 - 70 1.59e-09 GGGG GCGAGTCGAACGCCCGATCTCAAGATT TCGTAGTGGT chrIV:946121-946615 - 46 1.59e-09 TCTCCCGGGG GCGAGTCGAACGCCCGATCTCAAGATT TCGTAGTGAT chrXIII:572696-573157 + 17 2.12e-09 TGCTCCAGGG GAGGTTCGAACTCTCGACCTTCAGATT ATGAGACTGA chrX:390837-391328 + 21 2.12e-09 TGCTCCAGGG GAGGTTCGAACTCTCGACCTTCAGATT ATGAGACTGA chrXVI:622296-622867 + 19 2.56e-09 TGCGAATTCT GTGGATCGAACACAGGACCTCCAGATA ACTTGACCGA chrXVI:560001-560509 + 3 2.56e-09 CT GTGGATCGAACACAGGACCTCCAGATA ACTTGACCGA chrVIII:358275-358784 + 9 2.56e-09 CGAATTCT GTGGATCGAACACAGGACCTCCAGATA ACTTGACCGA chrVI:157669-158251 + 16 2.56e-09 TGCGAATTCT GTGGATCGAACACAGGACCTCCAGATA ACTTGACCGA chrVII:779389-779924 - 45 3.08e-09 TGAGCGGTAC GAGAATCGAACCCGTGTCCCCACCTTG GAAGGGTGGG chrXV:340107-340590 + 11 3.68e-09 CTTCCCCGCC AGGACTTGAACCTGGAATCTTCTGGTT CGTAGCCAGA chrXII:374200-374664 - 9 3.68e-09 CTTCCCCGCC AGGACTTGAACCTGGAATCTTCTGGTT CGTAGCCA chrV:492185-492569 + 35 3.68e-09 CTTCCCCGCC AGGACTTGAACCTGGAATCTTCTGGTT CGTAGCCAGA chrIV:619683-620262 + 57 3.68e-09 CTTCCCCGCC AGGACTTGAACCTGGAATCTTCTGGTT CGTAGCCAGA chrXVI:55814-56518 + 63 9.38e-09 TGAAACGGAC AGGAATTGAACCTGCAACCCTTCGATT GCAATCTTAT chrXVI:743953-744660 - 63 1.50e-08 TGCCACCTGT CAGAATTGAACTAACGACCTTTGCATT ACAAGTGCAA chrVII:706919-707350 + 34 2.72e-08 AGCTCGCACT CAGGATCGAACTAAGGACCAACAGATT TGCAATCTGC chrXIII:463266-463902 - 55 1.06e-07 CTCCGCGACG GGGAATTGAACCCCGATCTGGCACGCG ACAAGCGCCC chrXII:426858-427459 - 59 1.06e-07 CTCCGCGACG GGGAATTGAACCCCGATCTGGCACGCG ACAAGCGCCC chrX:204481-205035 - 62 1.06e-07 CTCCGCGACG GGGAATTGAACCCCGATCTGGCACGCG ACAAGCGCCC chrIX:336136-336646 + 18 1.06e-07 CTCCGCGACG GGGAATTGAACCCCGATCTGGCACGCG ACAAGCGCCC chrXV:710013-710488 - 36 1.12e-07 TAGCGCCGCT CGGTTTCGATCCGAGGACATCAGGGTT ATGAGCCCTG chrXIII:362843-363312 - 72 2.43e-07 CC TAGAATCGAACCAGGGTTTCATCGGCC ACAACGATGT chrVII:319584-320147 - 1 2.43e-07 TGCCATCTCC TAGAATCGAACCAGGGTTTCATCGGCC chrVII:110389-110928 + 27 2.43e-07 TGCCATCTCC TAGAATCGAACCAGGGTTTCATCGGCC ACAACGATGT chrV:434383-434773 + 23 2.43e-07 TGCCATCTCC TAGAATCGAACCAGGGTTTCATCGGCC ACAACGATGT chrV:207109-207671 - 52 2.43e-07 TGCCATCTCC TAGAATCGAACCAGGGTTTCATCGGCC ACAACGATGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYCHGRTT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXVI:819293-819834 8.4e-13 52_[-1]_21 chrXIV:569667-570160 8.4e-13 13_[+1]_60 chrXII:734699-735017 8.4e-13 30_[-1]_43 chrVII:738890-739392 8.4e-13 67_[-1]_6 chrV:551054-551592 8.4e-13 21_[+1]_52 chrV:443008-443478 8.4e-13 18_[+1]_55 chrII:197240-197879 8.4e-13 21_[-1]_52 chrIII:123395-123824 1.7e-12 27_[+1]_46 chrXIII:747737-748161 3.9e-12 2_[+1]_71 chrXIII:131507-132122 3.9e-12 70_[+1]_3 chrXI:162287-162800 3.9e-12 3_[+1]_70 chrX:374198-374848 3.9e-12 42_[+1]_31 chrX:355139-355724 3.9e-12 27_[-1]_46 chrVII:736185-736608 3.9e-12 28_[-1]_45 chrVII:405273-405800 3.9e-12 18_[-1]_55 chrIV:568538-569276 3.9e-12 59_[-1]_14 chrXV:853981-854442 5.4e-12 35_[+1]_38 chrXII:214639-215162 5.4e-12 42_[+1]_31 chrV:311763-312291 5.4e-12 55_[+1]_18 chrI:166040-166577 5.4e-12 44_[-1]_29 chrXI:202815-203333 8.6e-12 10_[-1]_63 chrX:414735-415266 8.6e-12 51_[-1]_22 chrVII:876035-876803 8.6e-12 60_[-1]_13 chrVI:226470-226940 8.6e-12 42_[+1]_31 chrV:435564-436041 8.6e-12 9_[+1]_64 chrV:135160-135703 8.6e-12 53_[+1]_20 chrIX:300011-300504 8.6e-12 30_[+1]_43 chrXI:46548-47031 2.1e-11 5_[+1]_68 chrXVI:209800-210588 2.4e-11 57_[+1]_16 chrVII:541625-542187 2.4e-11 28_[-1]_45 chrV:487092-487650 2.4e-11 19_[+1]_54 chrV:176849-177481 2.4e-11 18_[-1]_55 chrIX:370205-370683 2.4e-11 57_[-1]_16 chrIX:197340-197959 2.4e-11 27_[-1]_46 chrIV:1016955-1017520 2.4e-11 29_[+1]_44 chrXVI:572007-572579 7e-11 59_[-1]_14 chrXV:226353-226918 7e-11 35_[+1]_38 chrX:531541-532182 7e-11 50_[-1]_23 chrVII:930724-931227 7e-11 37_[+1]_36 chrVII:845404-845929 7e-11 66_[-1]_7 chrXV:113515-114247 1.2e-10 6_[-1]_67 chrXIV:104568-105129 1.2e-10 42_[-1]_31 chrVIII:115892-116431 1.2e-10 5_[+1]_68 chrIX:325490-326097 1.2e-10 40_[-1]_33 chrIV:802526-803014 1.2e-10 20_[+1]_53 chrIV:644938-645388 1.2e-10 49_[+1]_24 chrIV:520690-521401 1.2e-10 11_[-1]_62 chrIV:434031-434563 1.2e-10 26_[+1]_47 chrII:350546-351138 1.2e-10 69_[-1]_4 chrII:266166-266689 1.2e-10 36_[-1]_37 chrXVI:856756-857123 1.5e-10 48_[-1]_25 chrXIV:546946-547420 1.5e-10 26_[-1]_47 chrXIII:320938-321328 1.5e-10 73_[+1] chrXII:656707-657213 1.5e-10 33_[+1]_40 chrX:197098-197616 1.5e-10 15_[+1]_58 chrVIII:388663-389230 1.5e-10 6_[+1]_67 chrVII:774108-774622 1.5e-10 69_[-1]_4 chrIV:410175-410704 1.5e-10 25_[-1]_48 chrX:538353-538902 2.1e-10 12_[-1]_61 chrVIII:475482-475908 2.4e-10 70_[+1]_3 chrV:130814-131422 2.4e-10 23_[+1]_50 chrIV:1075265-1075781 2.4e-10 8_[+1]_65 chrXIII:420311-420872 3e-10 56_[+1]_17 chrXIII:372185-372723 3e-10 50_[+1]_23 chrXII:687648-688161 3e-10 14_[+1]_59 chrVIII:85103-85573 3e-10 19_[+1]_54 chrVII:412110-412588 3e-10 4_[+1]_69 chrV:469250-469813 3e-10 12_[-1]_61 chrV:438467-438992 3e-10 57_[-1]_16 chrIV:488470-489182 4.2e-10 30_[+1]_43 chrX:233674-234351 4.6e-10 12_[-1]_61 chrXVI:768930-769511 5.7e-10 46_[+1]_27 chrXV:438438-438984 5.7e-10 40_[-1]_33 chrXI:578768-579348 5.7e-10 15_[-1]_58 chrXV:487210-487711 1.1e-09 65_[-1]_8 chrXV:228081-228612 1.1e-09 71_[-1]_2 chrXIV:632385-632903 1.1e-09 41_[-1]_32 chrXIV:102492-102972 1.1e-09 70_[-1]_3 chrXII:975780-976262 1.1e-09 21_[+1]_52 chrXI:74383-74979 1.1e-09 29_[-1]_44 chrVII:730941-731437 1.1e-09 34_[-1]_39 chrXIII:837727-838317 1.6e-09 7_[-1]_66 chrVI:210428-210902 1.6e-09 13_[+1]_60 chrVI:167238-167700 1.6e-09 69_[-1]_4 chrIV:946121-946615 1.6e-09 45_[-1]_28 chrXIII:572696-573157 2.1e-09 16_[+1]_57 chrX:390837-391328 2.1e-09 20_[+1]_53 chrXVI:622296-622867 2.6e-09 18_[+1]_55 chrXVI:560001-560509 2.6e-09 2_[+1]_71 chrVIII:358275-358784 2.6e-09 8_[+1]_65 chrVI:157669-158251 2.6e-09 15_[+1]_58 chrVII:779389-779924 3.1e-09 44_[-1]_29 chrXV:340107-340590 3.7e-09 10_[+1]_63 chrXII:374200-374664 3.7e-09 8_[-1]_65 chrV:492185-492569 3.7e-09 34_[+1]_39 chrIV:619683-620262 3.7e-09 56_[+1]_17 chrXVI:55814-56518 9.4e-09 62_[+1]_11 chrXVI:743953-744660 1.5e-08 62_[-1]_11 chrVII:706919-707350 2.7e-08 33_[+1]_40 chrXIII:463266-463902 1.1e-07 54_[-1]_19 chrXII:426858-427459 1.1e-07 58_[-1]_15 chrX:204481-205035 1.1e-07 61_[-1]_12 chrIX:336136-336646 1.1e-07 17_[+1]_56 chrXV:710013-710488 1.1e-07 35_[-1]_38 chrXIII:362843-363312 2.4e-07 71_[-1]_2 chrVII:319584-320147 2.4e-07 [-1]_73 chrVII:110389-110928 2.4e-07 26_[+1]_47 chrV:434383-434773 2.4e-07 22_[+1]_51 chrV:207109-207671 2.4e-07 51_[-1]_22 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYCHGRTT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SGGRRTCGAACCSVKGAYCTYCHGRTT width=27 seqs=109 chrXVI:819293-819834 ( 53) CGGGATCGAACCGCTGATCCCCGCGTT 1 chrXIV:569667-570160 ( 14) CGGGATCGAACCGCTGATCCCCGCGTT 1 chrXII:734699-735017 ( 31) CGGGATCGAACCGCTGATCCCCGCGTT 1 chrVII:738890-739392 ( 68) CGGGATCGAACCGCTGATCCCCGCGTT 1 chrV:551054-551592 ( 22) CGGGATCGAACCGCTGATCCCCGCGTT 1 chrV:443008-443478 ( 19) CGGGATCGAACCGCTGATCCCCGCGTT 1 chrII:197240-197879 ( 22) CGGGATCGAACCGCTGATCCCCGCGTT 1 chrIII:123395-123824 ( 28) GGGACTCGAACCCGGGACCTCCCGCAC 1 chrXIII:747737-748161 ( 3) GGGGGTCGAACCCATAATCTTCTGATT 1 chrXIII:131507-132122 ( 71) GGGGGTCGAACCCATAATCTTCTGATT 1 chrXI:162287-162800 ( 4) GGGGGTCGAACCCATAATCTTCTGATT 1 chrX:374198-374848 ( 43) GGGGGTCGAACCCATAATCTTCTGATT 1 chrX:355139-355724 ( 28) GGGGGTCGAACCCATAATCTTCTGATT 1 chrVII:736185-736608 ( 29) GGGGGTCGAACCCATAATCTTCTGATT 1 chrVII:405273-405800 ( 19) GGGGGTCGAACCCATAATCTTCTGATT 1 chrIV:568538-569276 ( 60) GGGGGTCGAACCCATAATCTTCTGATT 1 chrXV:853981-854442 ( 36) CGGAATCGAACCGATGACCTCTTCCTT 1 chrXII:214639-215162 ( 43) CGGAATCGAACCGATGACCTCTTCCTT 1 chrV:311763-312291 ( 56) CGGAATCGAACCGATGACCTCTTCCTT 1 chrI:166040-166577 ( 45) CGGAATCGAACCGATGACCTCTTCCTT 1 chrXI:202815-203333 ( 11) GGGGCTCGAACCCCTAACCTTATGATT 1 chrX:414735-415266 ( 52) GGGGCTCGAACCCCTAACCTTATGATT 1 chrVII:876035-876803 ( 61) GGGGCTCGAACCCCTAACCTTATGATT 1 chrVI:226470-226940 ( 43) GGGGCTCGAACCCCTAACCTTATGATT 1 chrV:435564-436041 ( 10) GGGGCTCGAACCCCTAACCTTATGATT 1 chrV:135160-135703 ( 54) GGGGCTCGAACCCCTAACCTTATGATT 1 chrIX:300011-300504 ( 31) GGGGCTCGAACCCCTAACCTTATGATT 1 chrXI:46548-47031 ( 6) GGGAATTGAACCCACGATCCCCGCATT 1 chrXVI:209800-210588 ( 58) GGGAGTCGAACCCCGGTCTCCACGGTG 1 chrVII:541625-542187 ( 29) GGGAGTCGAACCCCGGTCTCCACGGTG 1 chrV:487092-487650 ( 20) GGGAGTCGAACCCCGGTCTCCACGGTG 1 chrV:176849-177481 ( 19) GGGAGTCGAACCCCGGTCTCCACGGTG 1 chrIX:370205-370683 ( 58) GGGAGTCGAACCCCGGTCTCCACGGTG 1 chrIX:197340-197959 ( 28) GGGAGTCGAACCCCGGTCTCCACGGTG 1 chrIV:1016955-1017520 ( 30) GGGAGTCGAACCCCGGTCTCCACGGTG 1 chrXVI:572007-572579 ( 60) CGGAATCGAACCGGGGGCCCAACGATG 1 chrXV:226353-226918 ( 36) CGGAATCGAACCGGGGGCCCAACGATG 1 chrX:531541-532182 ( 51) CGGAATCGAACCGGGGGCCCAACGATG 1 chrVII:930724-931227 ( 38) CGGAATCGAACCGGGGGCCCAACGATG 1 chrVII:845404-845929 ( 67) CGGAATCGAACCGGGGGCCCAACGATG 1 chrXV:113515-114247 ( 7) CGGATTTGAACCGATGATCTCCACATT 1 chrXIV:104568-105129 ( 43) CGGATTTGAACCGATGATCTCCACATT 1 chrVIII:115892-116431 ( 6) CGGATTTGAACCGATGATCTCCACATT 1 chrIX:325490-326097 ( 41) CGGATTTGAACCGATGATCTCCACATT 1 chrIV:802526-803014 ( 21) CGGATTCGAACCGGGGTTGTCCGGATC 1 chrIV:644938-645388 ( 50) CGGATTCGAACCGGGGTTGTCCGGATC 1 chrIV:520690-521401 ( 12) CGGATTCGAACCGGGGTTGTCCGGATC 1 chrIV:434031-434563 ( 27) CGGATTTGAACCGATGATCTCCACATT 1 chrII:350546-351138 ( 70) CGGATTCGAACCGGGGTTGTCCGGATC 1 chrII:266166-266689 ( 37) CGGATTTGAACCGATGATCTCCACATT 1 chrXVI:856756-857123 ( 49) CGGAATCGAACCGGAGACCTCTCCCAT 1 chrXIV:546946-547420 ( 27) GGGAATTGAACCCAGGGCCTCTCGCAT 1 chrXIII:320938-321328 ( 74) CGGAATCGAACCGGAGACCTCTCCCAT 1 chrXII:656707-657213 ( 34) CGGAATCGAACCGGAGACCTCTCCCAT 1 chrX:197098-197616 ( 16) CGGAATCGAACCGGAGACCTCTCCCAT 1 chrVIII:388663-389230 ( 7) GGGAATTGAACCCAGGGCCTCTCGCAT 1 chrVII:774108-774622 ( 70) CGGAATCGAACCGGAGACCTCTCCCAT 1 chrIV:410175-410704 ( 26) CGGAATCGAACCGGAGACCTCTCCCAT 1 chrX:538353-538902 ( 13) GGGACTCGAACCCGCAGTCTTCTCCTT 1 chrVIII:475482-475908 ( 71) GAGGATCGAACTCGGGACCTTTGCCGT 1 chrV:130814-131422 ( 24) CGGATTCGAACCGGGGTTGTTCGGATC 1 chrIV:1075265-1075781 ( 9) GAGGATCGAACTCGGGACCTTTGCCGT 1 chrXIII:420311-420872 ( 57) CAGGATCGAACTGGGGACGTTCTGCGT 1 chrXIII:372185-372723 ( 51) CAGGATCGAACTGGGGACGTTCTGCGT 1 chrXII:687648-688161 ( 15) CAGGATCGAACTGGGGACGTTCTGCGT 1 chrVIII:85103-85573 ( 20) CAGGATCGAACTGGGGACGTTCTGCGT 1 chrVII:412110-412588 ( 5) CAGGATCGAACTGGGGACGTTCTGCGT 1 chrV:469250-469813 ( 13) CAGGATCGAACTGGGGACGTTCTGCGT 1 chrV:438467-438992 ( 58) CAGGATCGAACTGGGGACGTTCTGCGT 1 chrIV:488470-489182 ( 31) GAGGTTCGAACTCGGGATCTTCGCCGT 1 chrX:233674-234351 ( 13) AGGACTCGAACCTGGAATCTCCTGGTT 1 chrXVI:768930-769511 ( 47) GGGGCTCGAACCCCTGACATTTCGGTA 1 chrXV:438438-438984 ( 41) GGGGCTCGAACCCCTGACATTTCGGTA 1 chrXI:578768-579348 ( 16) GGGGCTCGAACCCCTGACATTTCGGTA 1 chrXV:487210-487711 ( 66) GAGGGTTGAACTCACGATCTTGCGATT 1 chrXV:228081-228612 ( 72) GAGGGTTGAACTCACGATCTTGCGATT 1 chrXIV:632385-632903 ( 42) GAGGGTTGAACTCACGATCTTGCGATT 1 chrXIV:102492-102972 ( 71) GAGGGTTGAACTCACGATCTTGCGATT 1 chrXII:975780-976262 ( 22) GAGGGTTGAACTCACGATCTTGCGATT 1 chrXI:74383-74979 ( 30) GAGGGTTGAACTCACGATCTTGCGATT 1 chrVII:730941-731437 ( 35) GAGGGTTGAACTCACGATCTTGCGATT 1 chrXIII:837727-838317 ( 8) GCGAGTCGAACGCCCGATCTCAAGATT 1 chrVI:210428-210902 ( 14) GCGAGTCGAACGCCCGATCTCAAGATT 1 chrVI:167238-167700 ( 70) GCGAGTCGAACGCCCGATCTCAAGATT 1 chrIV:946121-946615 ( 46) GCGAGTCGAACGCCCGATCTCAAGATT 1 chrXIII:572696-573157 ( 17) GAGGTTCGAACTCTCGACCTTCAGATT 1 chrX:390837-391328 ( 21) GAGGTTCGAACTCTCGACCTTCAGATT 1 chrXVI:622296-622867 ( 19) GTGGATCGAACACAGGACCTCCAGATA 1 chrXVI:560001-560509 ( 3) GTGGATCGAACACAGGACCTCCAGATA 1 chrVIII:358275-358784 ( 9) GTGGATCGAACACAGGACCTCCAGATA 1 chrVI:157669-158251 ( 16) GTGGATCGAACACAGGACCTCCAGATA 1 chrVII:779389-779924 ( 45) GAGAATCGAACCCGTGTCCCCACCTTG 1 chrXV:340107-340590 ( 11) AGGACTTGAACCTGGAATCTTCTGGTT 1 chrXII:374200-374664 ( 9) AGGACTTGAACCTGGAATCTTCTGGTT 1 chrV:492185-492569 ( 35) AGGACTTGAACCTGGAATCTTCTGGTT 1 chrIV:619683-620262 ( 57) AGGACTTGAACCTGGAATCTTCTGGTT 1 chrXVI:55814-56518 ( 63) AGGAATTGAACCTGCAACCCTTCGATT 1 chrXVI:743953-744660 ( 63) CAGAATTGAACTAACGACCTTTGCATT 1 chrVII:706919-707350 ( 34) CAGGATCGAACTAAGGACCAACAGATT 1 chrXIII:463266-463902 ( 55) GGGAATTGAACCCCGATCTGGCACGCG 1 chrXII:426858-427459 ( 59) GGGAATTGAACCCCGATCTGGCACGCG 1 chrX:204481-205035 ( 62) GGGAATTGAACCCCGATCTGGCACGCG 1 chrIX:336136-336646 ( 18) GGGAATTGAACCCCGATCTGGCACGCG 1 chrXV:710013-710488 ( 36) CGGTTTCGATCCGAGGACATCAGGGTT 1 chrXIII:362843-363312 ( 72) TAGAATCGAACCAGGGTTTCATCGGCC 1 chrVII:319584-320147 ( 1) TAGAATCGAACCAGGGTTTCATCGGCC 1 chrVII:110389-110928 ( 27) TAGAATCGAACCAGGGTTTCATCGGCC 1 chrV:434383-434773 ( 23) TAGAATCGAACCAGGGTTTCATCGGCC 1 chrV:207109-207671 ( 52) TAGAATCGAACCAGGGTTTCATCGGCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYCHGRTT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 27 n= 43586 bayes= 9.21933 E= 1.5e-494 -251 109 144 -278 -34 -234 187 -310 -1341 -1341 243 -1341 78 -1341 127 -509 57 -25 36 -119 -1341 -1341 -1341 167 -1341 203 -1341 -40 -1341 -1341 243 -1341 167 -1341 -1341 -1341 166 -1341 -1341 -509 -1341 243 -1341 -1341 -310 198 -234 -71 -229 144 102 -251 3 66 98 -410 -251 -25 130 7 -40 -1341 203 -1341 121 -1341 -134 -64 -1341 154 -1341 55 -310 193 -75 -110 -509 41 -234 117 -164 127 -234 39 -45 139 -153 -51 -71 91 -17 -10 -1341 75 189 -1341 60 24 66 -509 -193 -117 -102 124 -229 -88 -25 111 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYCHGRTT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 27 nsites= 109 E= 1.5e-494 0.055046 0.394495 0.504587 0.045872 0.247706 0.036697 0.678899 0.036697 0.000000 0.000000 1.000000 0.000000 0.541284 0.000000 0.449541 0.009174 0.467890 0.155963 0.238532 0.137615 0.000000 0.000000 0.000000 1.000000 0.000000 0.761468 0.000000 0.238532 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.990826 0.000000 0.000000 0.009174 0.000000 1.000000 0.000000 0.000000 0.036697 0.733945 0.036697 0.192661 0.064220 0.504587 0.376147 0.055046 0.321101 0.293578 0.366972 0.018349 0.055046 0.155963 0.458716 0.330275 0.238532 0.000000 0.761468 0.000000 0.724771 0.000000 0.073394 0.201835 0.000000 0.541284 0.000000 0.458716 0.036697 0.706422 0.110092 0.146789 0.009174 0.247706 0.036697 0.706422 0.100917 0.449541 0.036697 0.412844 0.229358 0.486239 0.064220 0.220183 0.192661 0.348624 0.165138 0.293578 0.000000 0.311927 0.688073 0.000000 0.477064 0.220183 0.293578 0.009174 0.082569 0.082569 0.091743 0.743119 0.064220 0.100917 0.155963 0.678899 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTYCHGRTT MEME-1 regular expression -------------------------------------------------------------------------------- [GC][GA]G[AG][AG]T[CT]GAACC[CG][GAC][GT][GA][AT][CT]C[TC][CT][CAT][CT][GC][AGC]TT -------------------------------------------------------------------------------- Time 336.64 secs. ******************************************************************************** ******************************************************************************** MOTIF BDTGGCYBAGTKGKTWAAGSS MEME-2 width = 21 sites = 114 llr = 1766 E-value = 7.8e-328 ******************************************************************************** -------------------------------------------------------------------------------- Motif BDTGGCYBAGTKGKTWAAGSS MEME-2 Description -------------------------------------------------------------------------------- Simplified A 12:3:::2a1::::16651:: pos.-specific C 3:::1854::12::1::2:65 probability G 24:79:22:9:4a61:32845 matrix T 34a::233::94:464111:1 bits 2.4 * 2.2 * * 1.9 * * * 1.7 * * ** * Relative 1.5 **** ** * * Entropy 1.2 **** *** ** *** (22.3 bits) 1.0 **** *** ** *** 0.7 ***** *** ** * *** 0.5 ***** ****** ** *** 0.2 ********************* 0.0 --------------------- Multilevel CTTGGCCCAGTGGGTAAAGCG consensus TG A TTT T T TG GC sequence A GG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BDTGGCYBAGTKGKTWAAGSS MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXVI:880130-880587 - 36 3.90e-11 ATAATGGTCT CTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXVI:819293-819834 + 21 3.90e-11 AGAATGGTCT CTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXIV:602091-602530 + 57 3.90e-11 ACAATGGTCT CTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXIV:569667-570160 - 52 3.90e-11 ACAGTGGTCT CTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrVII:738890-739392 + 36 3.90e-11 AAATAGGTCT CTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrV:551054-551592 - 60 3.90e-11 TTACAGGTCT CTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrV:443008-443478 - 57 3.90e-11 AATTTGGTCT CTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrX:523853-524341 - 21 1.05e-10 TTAAAGGCAA CTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrVIII:132786-133392 - 43 1.05e-10 TAAGTGGCAA CTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrII:226856-227387 + 9 1.05e-10 CGAGGCAA CTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrI:182324-182795 - 69 1.05e-10 ATTTTGGCAA CTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrXV:853981-854442 - 73 3.14e-10 CAGGGCA CATGGCGCAGTTGGTAGCGCG CTTCCCTTGC chrXII:214639-215162 - 80 3.14e-10 . CATGGCGCAGTTGGTAGCGCG CTTCCCTTGC chrI:166040-166577 + 14 3.14e-10 GAGTTGGGCA CATGGCGCAGTTGGTAGCGCG CTTCCCTTGC chrXII:784133-784570 + 58 6.81e-10 CAACCGTCCC AGTGGCCGAGTGGTTAAGGCG ATGCCTGCTA chrXII:731897-732264 + 65 6.81e-10 ACAATGGGAG TTTGGCCGAGTGGTTTAAGGC GTCAGATTTA chrXII:592122-593112 - 27 6.81e-10 ACAATGGGAG TTTGGCCGAGTGGTTTAAGGC GTCAGATTTA chrVI:191291-191831 - 77 6.81e-10 CCC AGTGGCCGAGTGGTTAAGGCG ATGCCCTGCT chrXVI:856756-857123 + 18 8.16e-10 GATTCGGGCG TGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXVI:689347-689872 + 11 8.16e-10 TTTTGGGCAC TATGGCCGAGTGGTTAAGGCG ACAGACTTGA chrXII:656707-657213 - 71 8.16e-10 AATTGGGCG TGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrX:197098-197616 - 53 8.16e-10 TATTAGGGCG TGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrVII:774108-774622 + 39 8.16e-10 TAATTGGGCG TGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrVI:204786-205215 - 21 8.16e-10 CGTTCGGGCG TGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrV:288185-288820 - 47 8.16e-10 TGATAGGCAC TATGGCCGAGTGGTTAAGGCG ACAGACTTGA chrIII:227719-228210 + 33 8.16e-10 GAAATGGCAC TATGGCCGAGTGGTTAAGGCG AGAGACTCGA chrXVI:810460-810880 + 61 1.38e-09 TTTGCGACTC CATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXV:487210-487711 + 34 1.38e-09 AGTTAGACTC CATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXV:228081-228612 + 40 1.38e-09 TATTAGACTC CATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXIV:632385-632903 + 10 1.38e-09 AAGTGACTC CATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXIV:102492-102972 + 39 1.38e-09 TATAAGACTC CATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXII:975780-976262 - 60 1.38e-09 TAAAAGACTC CATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrVII:730941-731437 + 3 1.38e-09 TC CATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrIII:127512-127922 + 54 1.38e-09 AAAATGACTC CATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXIV:104568-105129 + 12 1.62e-09 TCTGAGCTTC TATGGCCAAGTTGGTAAGGCG CCACACTAGT chrVIII:115892-116431 - 43 1.62e-09 TTAGAGCTTC TATGGCCAAGTTGGTAAGGCG CCACACTAGT chrIX:325490-326097 + 10 1.62e-09 ACGAGCTTC TATGGCCAAGTTGGTAAGGCG CCACACTAGT chrIX:174815-175253 + 52 1.62e-09 TACGAGCTTC TATGGCCAAGTTGGTAAGGCG CCACACTAGT chrIV:434031-434563 - 64 1.62e-09 CAGAAGCTTC TATGGCCAAGTTGGTAAGGCG CCACACTAGT chrII:266166-266689 + 6 1.62e-09 GCTTC TATGGCCAAGTTGGTAAGGCG CCACACTAGT chrXII:875200-875615 + 24 2.24e-09 ACTCATCCTT GTTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrVII:115247-115780 + 30 2.24e-09 ACTCATCCTT GTTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrIV:359364-359863 + 19 2.24e-09 ACTCATCCTT GTTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXI:83939-84455 + 66 2.62e-09 TGTATGGAGG GTTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrX:424304-424750 - 13 2.62e-09 AAGATGGAGG GTTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrIV:519556-519958 + 41 2.62e-09 TTTACGGAGG GTTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrII:347386-347906 + 12 2.62e-09 TATACGGAGG GTTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrXIV:374659-375103 + 43 9.43e-09 AATAAGCGGA CTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXV:663616-664126 - 39 1.22e-08 ATAGTGGTTT CGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXII:687648-688161 - 53 1.22e-08 TAATAGGTTT CGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXI:379458-379921 + 46 1.22e-08 TAATAGGTTT CGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXI:307992-308432 - 30 1.22e-08 TAAGTGGTTT CGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrVIII:85103-85573 - 58 1.22e-08 AATTTGGTTT CGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrVII:823265-823699 + 55 1.22e-08 AGAGTGGTTT CGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrVII:412110-412588 - 43 1.22e-08 AAACTGGTTT CGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrV:438467-438992 + 26 1.22e-08 AATTAGGTTT CGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXVI:622296-622867 - 75 1.77e-08 GCGGA TTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXVI:560001-560509 - 59 1.77e-08 ATTGAGCGGA TTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXIII:504652-505219 + 15 1.77e-08 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrXIII:352065-352518 + 44 1.77e-08 TATAAGCGGA TTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXII:628123-628661 + 46 1.77e-08 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrX:414735-415266 + 21 1.77e-08 AATTAGCCTT GTTGGCGCAATCGGTAGCGCG TATGACTCTT chrVIII:358275-358784 - 65 1.77e-08 AGTAAGCGGA TTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrVIII:237731-238166 - 16 1.77e-08 AGTAAGCGGA TTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrVII:876035-876803 + 30 1.77e-08 GAATAGCCTT GTTGGCGCAATCGGTAGCGCG TATGACTCTT chrVII:857219-857655 - 79 1.77e-08 G TTTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrVII:205297-205842 + 7 1.77e-08 TGGTTG TTTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrVII:185511-186082 - 15 1.77e-08 AAATAGCCTT GTTGGCGCAATCGGTAGCGCG TATGACTCTT chrVII:121972-122574 + 51 1.77e-08 AATTAGCCTT GTTGGCGCAATCGGTAGCGCG TATGACTCTT chrVI:226470-226940 - 80 1.77e-08 . GTTGGCGCAATCGGTAGCGCG TATGACTCTT chrVI:157669-158251 - 72 1.77e-08 GAAGCGGA TTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrV:435564-436041 - 47 1.77e-08 TAAGAGCCTT GTTGGCGCAATCGGTAGCGCG TATGACTCTT chrIX:300011-300504 - 68 1.77e-08 AAATAGCCTT GTTGGCGCAATCGGTAGCGCG TATGACTCTT chrIV:1461473-1462094 - 71 1.77e-08 AAGTGGTTG TTTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrIV:1352323-1352736 - 34 1.77e-08 AAATAGCCTT GTTGGCGCAATCGGTAGCGCG TATGACTCTT chrII:36163-36595 + 74 1.77e-08 TGTAAGCGGA TTTAGCTCAGTTGGGAGAGCG CCAGAC chrXII:605136-605654 - 62 3.54e-08 AAAATGCTCG TGTAGCTCAGTGGTTAGAGCT TCGTGCTTAT chrIV:884177-884632 + 12 3.54e-08 AAAATGCTCG TGTAGCTCAGTGGTTAGAGCT TCGTGCTTAT chrVII:700117-701268 + 38 9.90e-08 GAATTGGTAC TCTGGCCGAGTGGTCTAAGGC GTCAGGTCGA chrXV:340107-340590 - 48 1.43e-07 ATCTGTTCCT CGTGGCCCAATGGTCACGGCG TCTGGCTACG chrV:492185-492569 - 72 1.43e-07 CTATTCCT CGTGGCCCAATGGTCACGGCG TCTGGCTACG chrXIII:572696-573157 - 54 1.87e-07 AGACAGCTTC AGTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrX:422579-423299 + 53 1.87e-07 TGTATGCTTC AGTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrX:390837-391328 - 58 1.87e-07 ATAGTGCTTC AGTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrIV:1175589-1176078 + 51 1.87e-07 ACAAAGCTTC AGTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrX:353923-354561 + 57 3.60e-07 TATCACTCTC GGTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrVI:210428-210902 - 67 3.60e-07 AACGACTCTC GGTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrVI:167238-167700 + 23 3.60e-07 AACGACTCTC GGTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrXII:11011-12005 - 75 4.19e-07 TAAGC GGTAGTGGAGTTGGATATGGG TAATTGGAGG chrXVI:860136-860644 + 44 5.23e-07 AACAAGCGCA AGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrXVI:572007-572579 + 31 5.23e-07 ACTTCGCGCA AGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrXV:226353-226918 - 71 5.23e-07 TTCAGCGCA AGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrXIII:923191-924377 - 38 5.23e-07 ATGCACGGCA CTTGCCTCAGTGGTCTATACC CTGTTCCATT chrXIII:183781-184191 - 7 5.23e-07 AGATCGCGCA AGTGGTTTAGTGGTAAAATCC AACGTT chrX:531541-532182 + 22 5.23e-07 AGTGAGCGCA AGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrVII:930724-931227 - 73 5.23e-07 AAGCGCA AGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrVII:845404-845929 + 38 5.23e-07 AACAAGCGCA AGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrVI:162022-162442 + 51 5.23e-07 AACAAGCGCA AGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrIV:992612-993064 + 49 5.23e-07 TGTGAGCGCA AGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrIV:83288-83815 + 52 5.23e-07 ACTTAGCGCA AGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrXI:0-1089 + 60 7.93e-07 ATTCACGGCA CTTGCCTCAGCGGTTTATACC CTGTGCAATT chrXII:489295-489557 + 20 1.31e-06 TCCGATCAAC TGTAGTTAAGCTGGTAAGAGC CTGACCGAGT chrXII:468764-468961 + 48 1.31e-06 TCCGATCAAC TGTAGTTAAGCTGGTAAGAGC CTGACCGAGT chrIV:1524132-1525659 - 13 1.31e-06 ATACACGGCA CTTGCCTCAGCGGTCTATACC CTGTGCCATT chrIII:2-1722 + 33 1.31e-06 ATGCACGGCA CTTGCCTCAGCGGTCTATACC CTGTGCCATT chrI:229112-230194 - 43 1.31e-06 ATACACGGCA CTTGCCTCAGCGGTCTATACC CTGTCCCATT chrI:3-1066 + 64 1.31e-06 ATGCACGGCA CTTGCCTCAGCGGTCTATACC CTGTGCCATT chrXIV:783384-784322 + 21 3.85e-06 CAGGGTAAGT GGTAGTGGGGTTGGATATGGG TAATTGGAGG chrVIII:134037-134575 + 70 5.17e-06 GTTCCGGTCC TATAGTGTAGTGGTTATCACT TTCGGTTTTG chrV:130814-131422 - 60 5.17e-06 TAAGAGGTTT TATAGTGTAGTGGTTATCACT TTCGGTTTTG chrIV:802526-803014 - 57 5.17e-06 TTGTCGGTCC TATAGTGTAGTGGTTATCACT TTCGGTTTTG chrIII:168101-168624 - 35 5.17e-06 GTCCTGGTCC TATAGTGTAGTGGTTATCACT TTCGGTTTTG chrII:350546-351138 + 40 5.17e-06 AAAAGGGTTT TATAGTGTAGTGGTTATCACT TTCGGTTTTG chrXIV:96036-96620 + 43 1.13e-05 CCATGTGTTG GATGGTGTAACTGTAATGACG AGGTAATAAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BDTGGCYBAGTKGKTWAAGSS MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXVI:880130-880587 3.9e-11 35_[-2]_44 chrXVI:819293-819834 3.9e-11 20_[+2]_59 chrXIV:602091-602530 3.9e-11 56_[+2]_23 chrXIV:569667-570160 3.9e-11 51_[-2]_28 chrVII:738890-739392 3.9e-11 35_[+2]_44 chrV:551054-551592 3.9e-11 59_[-2]_20 chrV:443008-443478 3.9e-11 56_[-2]_23 chrX:523853-524341 1.1e-10 20_[-2]_59 chrVIII:132786-133392 1.1e-10 42_[-2]_37 chrII:226856-227387 1.1e-10 8_[+2]_71 chrI:182324-182795 1.1e-10 68_[-2]_11 chrXV:853981-854442 3.1e-10 72_[-2]_7 chrXII:214639-215162 3.1e-10 79_[-2] chrI:166040-166577 3.1e-10 13_[+2]_66 chrXII:784133-784570 6.8e-10 57_[+2]_22 chrXII:731897-732264 6.8e-10 64_[+2]_15 chrXII:592122-593112 6.8e-10 26_[-2]_53 chrVI:191291-191831 6.8e-10 76_[-2]_3 chrXVI:856756-857123 8.2e-10 17_[+2]_62 chrXVI:689347-689872 8.2e-10 10_[+2]_69 chrXII:656707-657213 8.2e-10 70_[-2]_9 chrX:197098-197616 8.2e-10 52_[-2]_27 chrVII:774108-774622 8.2e-10 38_[+2]_41 chrVI:204786-205215 8.2e-10 20_[-2]_59 chrV:288185-288820 8.2e-10 46_[-2]_33 chrIII:227719-228210 8.2e-10 32_[+2]_47 chrXVI:810460-810880 1.4e-09 60_[+2]_19 chrXV:487210-487711 1.4e-09 33_[+2]_46 chrXV:228081-228612 1.4e-09 39_[+2]_40 chrXIV:632385-632903 1.4e-09 9_[+2]_70 chrXIV:102492-102972 1.4e-09 38_[+2]_41 chrXII:975780-976262 1.4e-09 59_[-2]_20 chrVII:730941-731437 1.4e-09 2_[+2]_77 chrIII:127512-127922 1.4e-09 53_[+2]_26 chrXIV:104568-105129 1.6e-09 11_[+2]_68 chrVIII:115892-116431 1.6e-09 42_[-2]_37 chrIX:325490-326097 1.6e-09 9_[+2]_70 chrIX:174815-175253 1.6e-09 51_[+2]_28 chrIV:434031-434563 1.6e-09 63_[-2]_16 chrII:266166-266689 1.6e-09 5_[+2]_74 chrXII:875200-875615 2.2e-09 23_[+2]_56 chrVII:115247-115780 2.2e-09 29_[+2]_50 chrIV:359364-359863 2.2e-09 18_[+2]_61 chrXI:83939-84455 2.6e-09 65_[+2]_14 chrX:424304-424750 2.6e-09 12_[-2]_67 chrIV:519556-519958 2.6e-09 40_[+2]_39 chrII:347386-347906 2.6e-09 11_[+2]_68 chrXIV:374659-375103 9.4e-09 42_[+2]_37 chrXV:663616-664126 1.2e-08 38_[-2]_41 chrXII:687648-688161 1.2e-08 52_[-2]_27 chrXI:379458-379921 1.2e-08 45_[+2]_34 chrXI:307992-308432 1.2e-08 29_[-2]_50 chrVIII:85103-85573 1.2e-08 57_[-2]_22 chrVII:823265-823699 1.2e-08 54_[+2]_25 chrVII:412110-412588 1.2e-08 42_[-2]_37 chrV:438467-438992 1.2e-08 25_[+2]_54 chrXVI:622296-622867 1.8e-08 74_[-2]_5 chrXVI:560001-560509 1.8e-08 58_[-2]_21 chrXIII:504652-505219 1.8e-08 14_[+2]_65 chrXIII:352065-352518 1.8e-08 43_[+2]_36 chrXII:628123-628661 1.8e-08 45_[+2]_34 chrX:414735-415266 1.8e-08 20_[+2]_59 chrVIII:358275-358784 1.8e-08 64_[-2]_15 chrVIII:237731-238166 1.8e-08 15_[-2]_64 chrVII:876035-876803 1.8e-08 29_[+2]_50 chrVII:857219-857655 1.8e-08 78_[-2]_1 chrVII:205297-205842 1.8e-08 6_[+2]_73 chrVII:185511-186082 1.8e-08 14_[-2]_65 chrVII:121972-122574 1.8e-08 50_[+2]_29 chrVI:226470-226940 1.8e-08 79_[-2] chrVI:157669-158251 1.8e-08 71_[-2]_8 chrV:435564-436041 1.8e-08 46_[-2]_33 chrIX:300011-300504 1.8e-08 67_[-2]_12 chrIV:1461473-1462094 1.8e-08 70_[-2]_9 chrIV:1352323-1352736 1.8e-08 33_[-2]_46 chrII:36163-36595 1.8e-08 73_[+2]_6 chrXII:605136-605654 3.5e-08 61_[-2]_18 chrIV:884177-884632 3.5e-08 11_[+2]_68 chrVII:700117-701268 9.9e-08 37_[+2]_42 chrXV:340107-340590 1.4e-07 47_[-2]_32 chrV:492185-492569 1.4e-07 71_[-2]_8 chrXIII:572696-573157 1.9e-07 53_[-2]_26 chrX:422579-423299 1.9e-07 52_[+2]_27 chrX:390837-391328 1.9e-07 57_[-2]_22 chrIV:1175589-1176078 1.9e-07 50_[+2]_29 chrX:353923-354561 3.6e-07 56_[+2]_23 chrVI:210428-210902 3.6e-07 66_[-2]_13 chrVI:167238-167700 3.6e-07 22_[+2]_57 chrXII:11011-12005 4.2e-07 74_[-2]_5 chrXVI:860136-860644 5.2e-07 43_[+2]_36 chrXVI:572007-572579 5.2e-07 30_[+2]_49 chrXV:226353-226918 5.2e-07 70_[-2]_9 chrXIII:923191-924377 5.2e-07 37_[-2]_42 chrXIII:183781-184191 5.2e-07 6_[-2]_73 chrX:531541-532182 5.2e-07 21_[+2]_58 chrVII:930724-931227 5.2e-07 72_[-2]_7 chrVII:845404-845929 5.2e-07 37_[+2]_42 chrVI:162022-162442 5.2e-07 50_[+2]_29 chrIV:992612-993064 5.2e-07 48_[+2]_31 chrIV:83288-83815 5.2e-07 51_[+2]_28 chrXI:0-1089 7.9e-07 59_[+2]_20 chrXII:489295-489557 1.3e-06 19_[+2]_60 chrXII:468764-468961 1.3e-06 47_[+2]_32 chrIV:1524132-1525659 1.3e-06 12_[-2]_67 chrIII:2-1722 1.3e-06 32_[+2]_47 chrI:229112-230194 1.3e-06 42_[-2]_37 chrI:3-1066 1.3e-06 63_[+2]_16 chrXIV:783384-784322 3.9e-06 20_[+2]_59 chrVIII:134037-134575 5.2e-06 69_[+2]_10 chrV:130814-131422 5.2e-06 59_[-2]_20 chrIV:802526-803014 5.2e-06 56_[-2]_23 chrIII:168101-168624 5.2e-06 34_[-2]_45 chrII:350546-351138 5.2e-06 39_[+2]_40 chrXIV:96036-96620 1.1e-05 42_[+2]_37 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BDTGGCYBAGTKGKTWAAGSS MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF BDTGGCYBAGTKGKTWAAGSS width=21 seqs=114 chrXVI:880130-880587 ( 36) CTTGGCCCAGTTGGTTAAGGC 1 chrXVI:819293-819834 ( 21) CTTGGCCCAGTTGGTTAAGGC 1 chrXIV:602091-602530 ( 57) CTTGGCCCAGTTGGTTAAGGC 1 chrXIV:569667-570160 ( 52) CTTGGCCCAGTTGGTTAAGGC 1 chrVII:738890-739392 ( 36) CTTGGCCCAGTTGGTTAAGGC 1 chrV:551054-551592 ( 60) CTTGGCCCAGTTGGTTAAGGC 1 chrV:443008-443478 ( 57) CTTGGCCCAGTTGGTTAAGGC 1 chrX:523853-524341 ( 21) CTTGGCCGAGTGGTTAAGGCG 1 chrVIII:132786-133392 ( 43) CTTGGCCGAGTGGTTAAGGCG 1 chrII:226856-227387 ( 9) CTTGGCCGAGTGGTTAAGGCG 1 chrI:182324-182795 ( 69) CTTGGCCGAGTGGTTAAGGCG 1 chrXV:853981-854442 ( 73) CATGGCGCAGTTGGTAGCGCG 1 chrXII:214639-215162 ( 80) CATGGCGCAGTTGGTAGCGCG 1 chrI:166040-166577 ( 14) CATGGCGCAGTTGGTAGCGCG 1 chrXII:784133-784570 ( 58) AGTGGCCGAGTGGTTAAGGCG 1 chrXII:731897-732264 ( 65) TTTGGCCGAGTGGTTTAAGGC 1 chrXII:592122-593112 ( 27) TTTGGCCGAGTGGTTTAAGGC 1 chrVI:191291-191831 ( 77) AGTGGCCGAGTGGTTAAGGCG 1 chrXVI:856756-857123 ( 18) TGTGGCGTAGTCGGTAGCGCG 1 chrXVI:689347-689872 ( 11) TATGGCCGAGTGGTTAAGGCG 1 chrXII:656707-657213 ( 71) TGTGGCGTAGTCGGTAGCGCG 1 chrX:197098-197616 ( 53) TGTGGCGTAGTCGGTAGCGCG 1 chrVII:774108-774622 ( 39) TGTGGCGTAGTCGGTAGCGCG 1 chrVI:204786-205215 ( 21) TGTGGCGTAGTCGGTAGCGCG 1 chrV:288185-288820 ( 47) TATGGCCGAGTGGTTAAGGCG 1 chrIII:227719-228210 ( 33) TATGGCCGAGTGGTTAAGGCG 1 chrXVI:810460-810880 ( 61) CATGGCCAAGTTGGTTAAGGC 1 chrXV:487210-487711 ( 34) CATGGCCAAGTTGGTTAAGGC 1 chrXV:228081-228612 ( 40) CATGGCCAAGTTGGTTAAGGC 1 chrXIV:632385-632903 ( 10) CATGGCCAAGTTGGTTAAGGC 1 chrXIV:102492-102972 ( 39) CATGGCCAAGTTGGTTAAGGC 1 chrXII:975780-976262 ( 60) CATGGCCAAGTTGGTTAAGGC 1 chrVII:730941-731437 ( 3) CATGGCCAAGTTGGTTAAGGC 1 chrIII:127512-127922 ( 54) CATGGCCAAGTTGGTTAAGGC 1 chrXIV:104568-105129 ( 12) TATGGCCAAGTTGGTAAGGCG 1 chrVIII:115892-116431 ( 43) TATGGCCAAGTTGGTAAGGCG 1 chrIX:325490-326097 ( 10) TATGGCCAAGTTGGTAAGGCG 1 chrIX:174815-175253 ( 52) TATGGCCAAGTTGGTAAGGCG 1 chrIV:434031-434563 ( 64) TATGGCCAAGTTGGTAAGGCG 1 chrII:266166-266689 ( 6) TATGGCCAAGTTGGTAAGGCG 1 chrXII:875200-875615 ( 24) GTTAGCTCAGTTGGTAGAGCG 1 chrVII:115247-115780 ( 30) GTTAGCTCAGTTGGTAGAGCG 1 chrIV:359364-359863 ( 19) GTTAGCTCAGTTGGTAGAGCG 1 chrXI:83939-84455 ( 66) GTTGGCCGAGTGGTCTAAGGC 1 chrX:424304-424750 ( 13) GTTGGCCGAGTGGTCTAAGGC 1 chrIV:519556-519958 ( 41) GTTGGCCGAGTGGTCTAAGGC 1 chrII:347386-347906 ( 12) GTTGGCCGAGTGGTCTAAGGC 1 chrXIV:374659-375103 ( 43) CTTAGCTCAGTTGGGAGAGCG 1 chrXV:663616-664126 ( 39) CGTGGTCTAGTCGGTTATGGC 1 chrXII:687648-688161 ( 53) CGTGGTCTAGTCGGTTATGGC 1 chrXI:379458-379921 ( 46) CGTGGTCTAGTCGGTTATGGC 1 chrXI:307992-308432 ( 30) CGTGGTCTAGTCGGTTATGGC 1 chrVIII:85103-85573 ( 58) CGTGGTCTAGTCGGTTATGGC 1 chrVII:823265-823699 ( 55) CGTGGTCTAGTCGGTTATGGC 1 chrVII:412110-412588 ( 43) CGTGGTCTAGTCGGTTATGGC 1 chrV:438467-438992 ( 26) CGTGGTCTAGTCGGTTATGGC 1 chrXVI:622296-622867 ( 75) TTTAGCTCAGTTGGGAGAGCG 1 chrXVI:560001-560509 ( 59) TTTAGCTCAGTTGGGAGAGCG 1 chrXIII:504652-505219 ( 15) TTTGGCCGAGCGGTCTAAGGC 1 chrXIII:352065-352518 ( 44) TTTAGCTCAGTTGGGAGAGCG 1 chrXII:628123-628661 ( 46) TTTGGCCGAGCGGTCTAAGGC 1 chrX:414735-415266 ( 21) GTTGGCGCAATCGGTAGCGCG 1 chrVIII:358275-358784 ( 65) TTTAGCTCAGTTGGGAGAGCG 1 chrVIII:237731-238166 ( 16) TTTAGCTCAGTTGGGAGAGCG 1 chrVII:876035-876803 ( 30) GTTGGCGCAATCGGTAGCGCG 1 chrVII:857219-857655 ( 79) TTTGGCCGAGCGGTCTAAGGC 1 chrVII:205297-205842 ( 7) TTTGGCCGAGCGGTCTAAGGC 1 chrVII:185511-186082 ( 15) GTTGGCGCAATCGGTAGCGCG 1 chrVII:121972-122574 ( 51) GTTGGCGCAATCGGTAGCGCG 1 chrVI:226470-226940 ( 80) GTTGGCGCAATCGGTAGCGCG 1 chrVI:157669-158251 ( 72) TTTAGCTCAGTTGGGAGAGCG 1 chrV:435564-436041 ( 47) GTTGGCGCAATCGGTAGCGCG 1 chrIX:300011-300504 ( 68) GTTGGCGCAATCGGTAGCGCG 1 chrIV:1461473-1462094 ( 71) TTTGGCCGAGCGGTCTAAGGC 1 chrIV:1352323-1352736 ( 34) GTTGGCGCAATCGGTAGCGCG 1 chrII:36163-36595 ( 74) TTTAGCTCAGTTGGGAGAGCG 1 chrXII:605136-605654 ( 62) TGTAGCTCAGTGGTTAGAGCT 1 chrIV:884177-884632 ( 12) TGTAGCTCAGTGGTTAGAGCT 1 chrVII:700117-701268 ( 38) TCTGGCCGAGTGGTCTAAGGC 1 chrXV:340107-340590 ( 48) CGTGGCCCAATGGTCACGGCG 1 chrV:492185-492569 ( 72) CGTGGCCCAATGGTCACGGCG 1 chrXIII:572696-573157 ( 54) AGTAGCTCAGTAGGAAGAGCG 1 chrX:422579-423299 ( 53) AGTAGCTCAGTAGGAAGAGCG 1 chrX:390837-391328 ( 58) AGTAGCTCAGTAGGAAGAGCG 1 chrIV:1175589-1176078 ( 51) AGTAGCTCAGTAGGAAGAGCG 1 chrX:353923-354561 ( 57) GGTAGCCAAGTTGGTTTAAGG 1 chrVI:210428-210902 ( 67) GGTAGCCAAGTTGGTTTAAGG 1 chrVI:167238-167700 ( 23) GGTAGCCAAGTTGGTTTAAGG 1 chrXII:11011-12005 ( 75) GGTAGTGGAGTTGGATATGGG 1 chrXVI:860136-860644 ( 44) AGTGGTTTAGTGGTAAAATCC 1 chrXVI:572007-572579 ( 31) AGTGGTTTAGTGGTAAAATCC 1 chrXV:226353-226918 ( 71) AGTGGTTTAGTGGTAAAATCC 1 chrXIII:923191-924377 ( 38) CTTGCCTCAGTGGTCTATACC 1 chrXIII:183781-184191 ( 7) AGTGGTTTAGTGGTAAAATCC 1 chrX:531541-532182 ( 22) AGTGGTTTAGTGGTAAAATCC 1 chrVII:930724-931227 ( 73) AGTGGTTTAGTGGTAAAATCC 1 chrVII:845404-845929 ( 38) AGTGGTTTAGTGGTAAAATCC 1 chrVI:162022-162442 ( 51) AGTGGTTTAGTGGTAAAATCC 1 chrIV:992612-993064 ( 49) AGTGGTTTAGTGGTAAAATCC 1 chrIV:83288-83815 ( 52) AGTGGTTTAGTGGTAAAATCC 1 chrXI:0-1089 ( 60) CTTGCCTCAGCGGTTTATACC 1 chrXII:489295-489557 ( 20) TGTAGTTAAGCTGGTAAGAGC 1 chrXII:468764-468961 ( 48) TGTAGTTAAGCTGGTAAGAGC 1 chrIV:1524132-1525659 ( 13) CTTGCCTCAGCGGTCTATACC 1 chrIII:2-1722 ( 33) CTTGCCTCAGCGGTCTATACC 1 chrI:229112-230194 ( 43) CTTGCCTCAGCGGTCTATACC 1 chrI:3-1066 ( 64) CTTGCCTCAGCGGTCTATACC 1 chrXIV:783384-784322 ( 21) GGTAGTGGGGTTGGATATGGG 1 chrVIII:134037-134575 ( 70) TATAGTGTAGTGGTTATCACT 1 chrV:130814-131422 ( 60) TATAGTGTAGTGGTTATCACT 1 chrIV:802526-803014 ( 57) TATAGTGTAGTGGTTATCACT 1 chrIII:168101-168624 ( 35) TATAGTGTAGTGGTTATCACT 1 chrII:350546-351138 ( 40) TATAGTGTAGTGGTTATCACT 1 chrXIV:96036-96620 ( 43) GATGGTGTAACTGTAATGACG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BDTGGCYBAGTKGKTWAAGSS MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 47120 bayes= 10.6553 E= 7.8e-328 -116 88 -1 9 -46 -440 92 39 -1348 -1348 -1348 167 -30 -1348 200 -1348 -1348 -182 235 -1348 -1348 202 -1348 -36 -1348 138 18 -3 -91 102 12 -30 166 -1348 -440 -1348 -170 -1348 228 -1348 -1348 -70 -1348 150 -316 -1 112 26 -1348 -1348 243 -1348 -1348 -1348 166 39 -108 -32 -140 101 92 -1348 -1348 36 97 -340 64 -199 67 -1 -8 -116 -108 -1348 204 -184 -1348 177 99 -1348 -1348 132 135 -235 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BDTGGCYBAGTKGKTWAAGSS MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 114 E= 7.8e-328 0.140351 0.342105 0.184211 0.333333 0.228070 0.008772 0.350877 0.412281 0.000000 0.000000 0.000000 1.000000 0.254386 0.000000 0.745614 0.000000 0.000000 0.052632 0.947368 0.000000 0.000000 0.754386 0.000000 0.245614 0.000000 0.482456 0.210526 0.307018 0.166667 0.377193 0.201754 0.254386 0.991228 0.000000 0.008772 0.000000 0.096491 0.000000 0.903509 0.000000 0.000000 0.114035 0.000000 0.885965 0.035088 0.184211 0.403509 0.377193 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.587719 0.412281 0.149123 0.149123 0.070175 0.631579 0.596491 0.000000 0.000000 0.403509 0.614035 0.017544 0.289474 0.078947 0.500000 0.184211 0.175439 0.140351 0.149123 0.000000 0.763158 0.087719 0.000000 0.631579 0.368421 0.000000 0.000000 0.464912 0.473684 0.061404 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BDTGGCYBAGTKGKTWAAGSS MEME-2 regular expression -------------------------------------------------------------------------------- [CT][TGA]T[GA]G[CT][CTG][CTG]AGT[GT]G[GT]T[AT][AG]AG[CG][GC] -------------------------------------------------------------------------------- Time 638.92 secs. ******************************************************************************** ******************************************************************************** MOTIF GSCSBBDTRGTKTARTGGTWA MEME-3 width = 21 sites = 55 llr = 815 E-value = 4.6e-100 ******************************************************************************** -------------------------------------------------------------------------------- Motif GSCSBBDTRGTKTARTGGTWA MEME-3 Description -------------------------------------------------------------------------------- Simplified A 1111114:6::1:a4:::156 pos.-specific C :66433::::322::1::22: probability G 7324334:4a:3::6:aa::3 matrix T 3:21332a::748::9::731 bits 2.4 * * 2.2 * ** 1.9 * ** 1.7 * * * ** Relative 1.5 * * * ** Entropy 1.2 * * ***** (21.4 bits) 1.0 ** **** ****** 0.7 *** **** ******* 0.5 **** ***** ******* * 0.2 ********************* 0.0 --------------------- Multilevel GCCCTGGTAGTTTAGTGGTAA consensus TGGGGCA G CGC A TG sequence CTT C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSCSBBDTRGTKTARTGGTWA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXV:110843-111271 - 6 1.61e-09 CAATTAACCC GGGCGGTTAGTGTAGTGGTTA TCATC chrXIV:96036-96620 - 14 1.61e-09 TCCAACACAT GGGCGGTTAGTGTAGTGGTTA TCATCCCACC chrVII:779389-779924 + 10 1.61e-09 GTTAACCCC GGGCGGTTAGTGTAGTGGTTA TCATCCCACC chrXIII:747737-748161 - 44 6.65e-09 CATATGACTA GCTCGCGTGGCGTAATGGCAA CGCGTCTGAC chrXI:162287-162800 - 45 6.65e-09 ACAAATATTA GCTCGCGTGGCGTAATGGCAA CGCGTCTGAC chrIV:568538-569276 + 25 6.65e-09 ACAAATAGTA GCTCGCGTGGCGTAATGGCAA CGCGTCTGAC chrII:405531-406248 + 39 6.65e-09 ACAAATAGTA GCTCGCGTGGCGTAATGGCAA CGCGTCTGAC chrXII:448495-449005 - 1 1.01e-08 AAGAAGTTCC GGTCCTATAGTGTAGTGGTTA chrXVI:743953-744660 + 28 1.15e-08 CAGTGTAAAA GCCTCCTTAGCTTAGTGGTAG AGCGTTGCAC chrXV:571716-572166 + 67 1.15e-08 ACAATTAAAA TCCGTGATAGTTTAATGGTCA GAATGGGCGC chrXIII:463266-463902 + 20 1.15e-08 CAGAAATTTG TCCGTGATAGTTTAATGGTCA GAATGGGCGC chrXII:426858-427459 + 24 1.15e-08 GTGTTTCTTA TCCGTGATAGTTTAATGGTCA GAATGGGCGC chrXI:513190-513652 - 12 1.15e-08 CAAATAACGT TCCGTGATAGTTTAATGGTCA GAATGGGCGC chrX:374198-374848 - 2 1.15e-08 CTTTGTTTCT TCCGTGATAGTTTAATGGTCA G chrX:355139-355724 + 75 1.15e-08 CTTTGTTTCT TCCGTGATAGTTTAATGGTCA GAATG chrX:204481-205035 + 27 1.15e-08 AACATAAAAA TCCGTGATAGTTTAATGGTCA GAATGGGCGC chrVIII:466627-467331 + 61 1.15e-08 TGTATTTTTA GCCTCCTTAGCTTAGTGGTAG AGCGTTGCAC chrVII:1003989-1004423 + 60 1.15e-08 TCAAGGGTTT GCCTCCTTAGCTTAGTGGTAG AGCGTTGCAC chrVII:661510-661952 + 68 1.15e-08 GTAAAAATTT GCCTCCTTAGCTTAGTGGTAG AGCGTTGCAC chrVII:544388-544928 - 20 1.15e-08 AGATATTTCT TCCGTGATAGTTTAATGGTCA GAATGGGCGC chrVII:531415-531794 + 56 1.15e-08 TCGAGTTACT TCCGTGATAGTTTAATGGTCA GAATGGGCGC chrIX:336136-336646 - 59 1.15e-08 TAGAAACAAA TCCGTGATAGTTTAATGGTCA GAATGGGCGC chrIX:324171-324618 - 10 1.15e-08 CATCTAATAT TCCGTGATAGTTTAATGGTCA GAATGGGCG chrVII:706919-707350 - 75 1.32e-08 ATCAA GCTCGTATGGCGCAGTGGTAG CGCAGCAGAT chrXV:464228-464692 + 40 1.50e-08 AAGTTAACAA GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrXIII:195903-196407 - 45 1.50e-08 AAGTTCACAA GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrXII:92232-92946 + 9 1.50e-08 GTTAATAA GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrVIII:388663-389230 - 79 1.50e-08 T GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrVI:101089-101616 + 74 1.50e-08 ACAATAATTC GGGCGTGTGGTCTAGTGGTAT GATTCT chrI:138891-139356 + 79 1.50e-08 CAATTAGTAC GGGCGTGTGGTCTAGTGGTAT G chrXIII:362843-363312 + 37 5.46e-08 ATCCAAGTTT GCCATCTTAGTATAGTGGTTA GTACACATCG chrVIII:62500-63032 + 39 5.46e-08 AAAATCATAT GCCATCTTAGTATAGTGGTTA GTACACATCG chrVII:110389-110928 - 68 5.46e-08 ATAATTACCT GCCATCTTAGTATAGTGGTTA GTACACATCG chrV:434383-434773 - 64 5.46e-08 TTGAAAAGTC GCCATCTTAGTATAGTGGTTA GTACACATCG chrV:207109-207671 + 17 5.46e-08 ATATAAGTTC GCCATCTTAGTATAGTGGTTA GTACACATCG chrXI:46548-47031 - 47 1.77e-07 AAATTACTCA GCCCTTTTGGCCAAGTGGTAA GGCATCGCAC chrXII:489295-489557 + 43 1.93e-07 GTAAGAGCCT GACCGAGTAGTGTAGTGGGTG ACCATACGCG chrXII:468764-468961 + 71 1.93e-07 GTAAGAGCCT GACCGAGTAGTGTAGTGGGTG ACCATACGC chrXVI:338662-339226 - 5 3.21e-07 ATGATTTAGC AGCGCCGTGGCGCAGTGGAAG CGCG chrXV:710013-710488 + 1 3.21e-07 . AGCGCCGTGGCGCAGTGGAAG CGCGCAGGGC chrXI:302564-303227 + 73 3.21e-07 ATTCCAAGAT GAAGCGGTGGCTCAATGGTAG AGCTTTC chrX:517640-518154 - 17 3.21e-07 ATAAAAGTTA AGCGCCGTGGCGCAGTGGAAG CGCGCAGGGC chrX:415769-416282 - 41 3.21e-07 AACAAAAGTT GAAGCGGTGGCTCAATGGTAG AGCTTTCGAC chrVII:878594-879051 - 23 3.21e-07 ATTTCAAGAT GAAGCGGTGGCTCAATGGTAG AGCTTTCGAC chrVII:287085-287808 - 39 3.21e-07 ATTTCAAGAT GAAGCGGTGGCTCAATGGTAG AGCTTTCGAC chrIV:1256856-1257310 - 26 3.48e-07 GATCTTCTTA GCGAAAGTGGTTCAGTGGTTA GAATTCATGC chrIV:1016955-1017520 - 71 4.08e-07 AAGGTACAA TCCGATGTAGTGTAACGGCTA TCACATCACG chrIII:123395-123824 - 69 5.94e-07 TTTCAAAGGA GGGCGTGTGGTCTAGAGGTAT GATTCTCGCT chrXIII:290411-291141 + 75 6.38e-07 TGAAATATAA TCCGATATAGTGTAACGGCTA TCACA chrV:487092-487650 - 61 6.38e-07 ATGAATTTAA TCCGATATAGTGTAACGGCTA TCACATCACG chrIX:370205-370683 + 23 6.38e-07 TAGATTATAA TCCGATATAGTGTAACGGCTA TCACATCACG chrIV:488470-489182 - 74 7.35e-07 GTTTCC GGTCCAATGGTCCAGTGGTTC AAGACGTCGC chrII:326562-327150 - 39 7.35e-07 TCGAGTTCCG GGTCCAATGGTCCAGTGGTTC AAGACGTCGC chrVII:73688-74249 + 21 1.69e-06 ATAAGATACT TGCTTCATAGTTTAGTTGTAA AATTGAAGTT chrIV:1075265-1075781 - 51 3.27e-06 CCGTAATATT GTTCCAATAGTGTAGCGGCTA TCACGTTGCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSCSBBDTRGTKTARTGGTWA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXV:110843-111271 1.6e-09 5_[-3]_74 chrXIV:96036-96620 1.6e-09 13_[-3]_66 chrVII:779389-779924 1.6e-09 9_[+3]_70 chrXIII:747737-748161 6.6e-09 43_[-3]_36 chrXI:162287-162800 6.6e-09 44_[-3]_35 chrIV:568538-569276 6.6e-09 24_[+3]_55 chrII:405531-406248 6.6e-09 38_[+3]_41 chrXII:448495-449005 1e-08 [-3]_79 chrXVI:743953-744660 1.2e-08 27_[+3]_52 chrXV:571716-572166 1.2e-08 66_[+3]_13 chrXIII:463266-463902 1.2e-08 19_[+3]_60 chrXII:426858-427459 1.2e-08 23_[+3]_56 chrXI:513190-513652 1.2e-08 11_[-3]_68 chrX:374198-374848 1.2e-08 1_[-3]_78 chrX:355139-355724 1.2e-08 74_[+3]_5 chrX:204481-205035 1.2e-08 26_[+3]_53 chrVIII:466627-467331 1.2e-08 60_[+3]_19 chrVII:1003989-1004423 1.2e-08 59_[+3]_20 chrVII:661510-661952 1.2e-08 67_[+3]_12 chrVII:544388-544928 1.2e-08 19_[-3]_60 chrVII:531415-531794 1.2e-08 55_[+3]_24 chrIX:336136-336646 1.2e-08 58_[-3]_21 chrIX:324171-324618 1.2e-08 9_[-3]_70 chrVII:706919-707350 1.3e-08 74_[-3]_5 chrXV:464228-464692 1.5e-08 39_[+3]_40 chrXIII:195903-196407 1.5e-08 44_[-3]_35 chrXII:92232-92946 1.5e-08 8_[+3]_71 chrVIII:388663-389230 1.5e-08 78_[-3]_1 chrVI:101089-101616 1.5e-08 73_[+3]_6 chrI:138891-139356 1.5e-08 78_[+3]_1 chrXIII:362843-363312 5.5e-08 36_[+3]_43 chrVIII:62500-63032 5.5e-08 38_[+3]_41 chrVII:110389-110928 5.5e-08 67_[-3]_12 chrV:434383-434773 5.5e-08 63_[-3]_16 chrV:207109-207671 5.5e-08 16_[+3]_63 chrXI:46548-47031 1.8e-07 46_[-3]_33 chrXII:489295-489557 1.9e-07 42_[+3]_37 chrXII:468764-468961 1.9e-07 70_[+3]_9 chrXVI:338662-339226 3.2e-07 4_[-3]_75 chrXV:710013-710488 3.2e-07 [+3]_79 chrXI:302564-303227 3.2e-07 72_[+3]_7 chrX:517640-518154 3.2e-07 16_[-3]_63 chrX:415769-416282 3.2e-07 40_[-3]_39 chrVII:878594-879051 3.2e-07 22_[-3]_57 chrVII:287085-287808 3.2e-07 38_[-3]_41 chrIV:1256856-1257310 3.5e-07 25_[-3]_54 chrIV:1016955-1017520 4.1e-07 70_[-3]_9 chrIII:123395-123824 5.9e-07 68_[-3]_11 chrXIII:290411-291141 6.4e-07 74_[+3]_5 chrV:487092-487650 6.4e-07 60_[-3]_19 chrIX:370205-370683 6.4e-07 22_[+3]_57 chrIV:488470-489182 7.4e-07 73_[-3]_6 chrII:326562-327150 7.4e-07 38_[-3]_41 chrVII:73688-74249 1.7e-06 20_[+3]_59 chrIV:1075265-1075781 3.3e-06 50_[-3]_29 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSCSBBDTRGTKTARTGGTWA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GSCSBBDTRGTKTARTGGTWA width=21 seqs=55 chrXV:110843-111271 ( 6) GGGCGGTTAGTGTAGTGGTTA 1 chrXIV:96036-96620 ( 14) GGGCGGTTAGTGTAGTGGTTA 1 chrVII:779389-779924 ( 10) GGGCGGTTAGTGTAGTGGTTA 1 chrXIII:747737-748161 ( 44) GCTCGCGTGGCGTAATGGCAA 1 chrXI:162287-162800 ( 45) GCTCGCGTGGCGTAATGGCAA 1 chrIV:568538-569276 ( 25) GCTCGCGTGGCGTAATGGCAA 1 chrII:405531-406248 ( 39) GCTCGCGTGGCGTAATGGCAA 1 chrXII:448495-449005 ( 1) GGTCCTATAGTGTAGTGGTTA 1 chrXVI:743953-744660 ( 28) GCCTCCTTAGCTTAGTGGTAG 1 chrXV:571716-572166 ( 67) TCCGTGATAGTTTAATGGTCA 1 chrXIII:463266-463902 ( 20) TCCGTGATAGTTTAATGGTCA 1 chrXII:426858-427459 ( 24) TCCGTGATAGTTTAATGGTCA 1 chrXI:513190-513652 ( 12) TCCGTGATAGTTTAATGGTCA 1 chrX:374198-374848 ( 2) TCCGTGATAGTTTAATGGTCA 1 chrX:355139-355724 ( 75) TCCGTGATAGTTTAATGGTCA 1 chrX:204481-205035 ( 27) TCCGTGATAGTTTAATGGTCA 1 chrVIII:466627-467331 ( 61) GCCTCCTTAGCTTAGTGGTAG 1 chrVII:1003989-1004423 ( 60) GCCTCCTTAGCTTAGTGGTAG 1 chrVII:661510-661952 ( 68) GCCTCCTTAGCTTAGTGGTAG 1 chrVII:544388-544928 ( 20) TCCGTGATAGTTTAATGGTCA 1 chrVII:531415-531794 ( 56) TCCGTGATAGTTTAATGGTCA 1 chrIX:336136-336646 ( 59) TCCGTGATAGTTTAATGGTCA 1 chrIX:324171-324618 ( 10) TCCGTGATAGTTTAATGGTCA 1 chrVII:706919-707350 ( 75) GCTCGTATGGCGCAGTGGTAG 1 chrXV:464228-464692 ( 40) GGGCGTGTGGTCTAGTGGTAT 1 chrXIII:195903-196407 ( 45) GGGCGTGTGGTCTAGTGGTAT 1 chrXII:92232-92946 ( 9) GGGCGTGTGGTCTAGTGGTAT 1 chrVIII:388663-389230 ( 79) GGGCGTGTGGTCTAGTGGTAT 1 chrVI:101089-101616 ( 74) GGGCGTGTGGTCTAGTGGTAT 1 chrI:138891-139356 ( 79) GGGCGTGTGGTCTAGTGGTAT 1 chrXIII:362843-363312 ( 37) GCCATCTTAGTATAGTGGTTA 1 chrVIII:62500-63032 ( 39) GCCATCTTAGTATAGTGGTTA 1 chrVII:110389-110928 ( 68) GCCATCTTAGTATAGTGGTTA 1 chrV:434383-434773 ( 64) GCCATCTTAGTATAGTGGTTA 1 chrV:207109-207671 ( 17) GCCATCTTAGTATAGTGGTTA 1 chrXI:46548-47031 ( 47) GCCCTTTTGGCCAAGTGGTAA 1 chrXII:489295-489557 ( 43) GACCGAGTAGTGTAGTGGGTG 1 chrXII:468764-468961 ( 71) GACCGAGTAGTGTAGTGGGTG 1 chrXVI:338662-339226 ( 5) AGCGCCGTGGCGCAGTGGAAG 1 chrXV:710013-710488 ( 1) AGCGCCGTGGCGCAGTGGAAG 1 chrXI:302564-303227 ( 73) GAAGCGGTGGCTCAATGGTAG 1 chrX:517640-518154 ( 17) AGCGCCGTGGCGCAGTGGAAG 1 chrX:415769-416282 ( 41) GAAGCGGTGGCTCAATGGTAG 1 chrVII:878594-879051 ( 23) GAAGCGGTGGCTCAATGGTAG 1 chrVII:287085-287808 ( 39) GAAGCGGTGGCTCAATGGTAG 1 chrIV:1256856-1257310 ( 26) GCGAAAGTGGTTCAGTGGTTA 1 chrIV:1016955-1017520 ( 71) TCCGATGTAGTGTAACGGCTA 1 chrIII:123395-123824 ( 69) GGGCGTGTGGTCTAGAGGTAT 1 chrXIII:290411-291141 ( 75) TCCGATATAGTGTAACGGCTA 1 chrV:487092-487650 ( 61) TCCGATATAGTGTAACGGCTA 1 chrIX:370205-370683 ( 23) TCCGATATAGTGTAACGGCTA 1 chrIV:488470-489182 ( 74) GGTCCAATGGTCCAGTGGTTC 1 chrII:326562-327150 ( 39) GGTCCAATGGTCCAGTGGTTC 1 chrVII:73688-74249 ( 21) TGCTTCATAGTTTAGTTGTAA 1 chrIV:1075265-1075781 ( 51) GTTCCAATAGTGTAGCGGCTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSCSBBDTRGTKTARTGGTWA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 47120 bayes= 10.3292 E= 4.6e-100 -252 -1243 182 -11 -153 160 73 -411 -211 160 11 -94 -153 111 111 -179 -179 55 73 6 -153 73 82 -30 21 -1243 111 -41 -1243 -1243 -1243 167 89 -1243 117 -1243 -1243 -1243 243 -1243 -1243 73 -1243 114 -179 -3 89 28 -411 11 -1243 131 167 -1243 -1243 -1243 41 -1243 165 -1243 -411 -103 -1243 150 -1243 -1243 240 -411 -1243 -1243 243 -1243 -252 -18 -235 125 53 11 -1243 14 89 -235 45 -130 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSCSBBDTRGTKTARTGGTWA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 55 E= 4.6e-100 0.054545 0.000000 0.654545 0.290909 0.109091 0.563636 0.309091 0.018182 0.072727 0.563636 0.200000 0.163636 0.109091 0.400000 0.400000 0.090909 0.090909 0.272727 0.309091 0.327273 0.109091 0.309091 0.327273 0.254545 0.363636 0.000000 0.400000 0.236364 0.000000 0.000000 0.000000 1.000000 0.581818 0.000000 0.418182 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.309091 0.000000 0.690909 0.090909 0.181818 0.345455 0.381818 0.018182 0.200000 0.000000 0.781818 1.000000 0.000000 0.000000 0.000000 0.418182 0.000000 0.581818 0.000000 0.018182 0.090909 0.000000 0.890909 0.000000 0.000000 0.981818 0.018182 0.000000 0.000000 1.000000 0.000000 0.054545 0.163636 0.036364 0.745455 0.454545 0.200000 0.000000 0.345455 0.581818 0.036364 0.254545 0.127273 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSCSBBDTRGTKTARTGGTWA MEME-3 regular expression -------------------------------------------------------------------------------- [GT][CG][CG][CG][TGC][GCT][GAT]T[AG]G[TC][TG][TC]A[GA]TGGT[ATC][AG] -------------------------------------------------------------------------------- Time 927.82 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrI:3-1066 1.37e-03 63_[+2(1.31e-06)]_16 chrI:81901-82306 5.58e-01 100 chrI:138891-139356 9.52e-06 78_[+3(1.50e-08)]_1 chrI:141580-141935 9.66e-01 100 chrI:166040-166577 3.28e-17 13_[+2(3.14e-10)]_10_[-1(5.43e-12)]_\ 29 chrI:180909-181494 1.68e-01 100 chrI:182324-182795 3.26e-09 68_[-2(1.05e-10)]_11 chrI:229112-230194 4.54e-04 42_[-2(1.31e-06)]_37 chrII:6010-7139 5.38e-01 100 chrII:9359-10030 6.43e-01 100 chrII:36163-36595 8.44e-06 73_[+2(1.77e-08)]_6 chrII:44935-45353 8.76e-01 100 chrII:60051-61287 1.09e-01 100 chrII:87949-88569 9.74e-01 100 chrII:88935-89996 7.17e-01 100 chrII:159839-160016 6.41e-02 100 chrII:165069-165438 5.81e-01 100 chrII:167594-168240 8.81e-01 100 chrII:181309-181646 9.57e-01 100 chrII:197240-197879 2.72e-09 21_[-1(8.40e-13)]_52 chrII:226856-227387 3.26e-09 8_[+2(1.05e-10)]_71 chrII:266166-266689 1.64e-14 5_[+2(1.62e-09)]_10_[-1(1.16e-10)]_\ 37 chrII:326562-327150 6.10e-06 38_[-3(7.35e-07)]_41 chrII:332193-333437 9.35e-03 100 chrII:347386-347906 8.44e-09 11_[+2(2.62e-09)]_68 chrII:350546-351138 1.88e-13 34_[+3(1.22e-07)]_14_[-1(1.16e-10)]_\ 4 chrII:373610-375861 7.62e-01 100 chrII:405531-406248 6.66e-14 38_[+3(6.65e-09)]_14_[-1(3.95e-12)] chrII:415518-415903 4.68e-01 100 chrII:444756-445021 3.76e-01 100 chrII:477090-477765 1.03e-01 100 chrII:478975-479582 1.90e-01 100 chrII:504497-504691 2.02e-02 100 chrII:544583-544829 8.07e-01 100 chrII:592368-593300 9.75e-01 100 chrII:604056-607073 7.42e-01 100 chrII:642872-643395 7.79e-01 100 chrII:644967-645847 6.89e-01 100 chrII:680407-682195 9.31e-01 100 chrII:812987-813183 6.01e-03 100 chrIII:2-1722 1.29e-03 32_[+2(1.31e-06)]_47 chrIII:11095-11554 5.11e-01 100 chrIII:14128-16924 2.46e-01 100 chrIII:29600-31153 3.17e-01 100 chrIII:58758-58991 7.24e-01 100 chrIII:81921-82756 5.82e-01 100 chrIII:107162-107775 9.39e-01 100 chrIII:123395-123824 9.20e-13 27_[+1(1.71e-12)]_14_[-3(5.94e-07)]_\ 11 chrIII:127512-127922 2.98e-07 53_[+2(1.38e-09)]_26 chrIII:141991-142998 3.47e-01 100 chrIII:162012-163149 6.73e-01 100 chrIII:163455-163892 1.68e-01 100 chrIII:168101-168624 2.33e-08 39_[-3(1.01e-08)]_40 chrIII:177073-178798 8.94e-01 100 chrIII:227719-228210 4.11e-08 32_[+2(8.16e-10)]_47 chrIII:293684-294421 4.26e-01 100 chrIII:294924-295852 5.54e-01 100 chrIII:315644-316619 9.18e-01 100 chrIV:26-374 3.67e-02 100 chrIV:83288-83815 1.68e-08 46_[+3(2.19e-08)]_33 chrIV:116739-118221 2.68e-01 100 chrIV:118440-118845 8.64e-01 100 chrIV:125299-125616 3.35e-01 100 chrIV:129931-131023 3.49e-01 100 chrIV:216981-218070 1.14e-01 75_[+3(8.90e-05)]_4 chrIV:221045-222372 4.68e-01 100 chrIV:229320-230653 3.07e-01 100 chrIV:307996-310185 7.40e-01 100 chrIV:321616-321963 7.87e-01 100 chrIV:322194-323607 2.16e-01 100 chrIV:340194-341701 6.28e-01 100 chrIV:358029-358480 9.78e-01 100 chrIV:359364-359863 3.33e-14 18_[+2(2.24e-09)]_33_[-1(5.75e-10)]_\ 1 chrIV:410175-410704 9.39e-07 25_[-1(1.47e-10)]_48 chrIV:411256-411663 1.70e-01 100 chrIV:434031-434563 1.64e-14 26_[+1(1.16e-10)]_10_[-2(1.62e-09)]_\ 16 chrIV:437526-438160 7.11e-02 100 chrIV:449549-450053 9.09e-01 100 chrIV:465254-465574 3.40e-01 100 chrIV:488470-489182 8.07e-11 30_[+1(4.15e-10)]_16_[-3(7.35e-07)]_\ 6 chrIV:490551-491280 8.77e-01 100 chrIV:519556-519958 1.48e-08 40_[+2(2.62e-09)]_39 chrIV:520690-521401 4.17e-07 11_[-1(1.16e-10)]_62 chrIV:525069-525269 3.72e-01 100 chrIV:538978-539220 2.51e-01 100 chrIV:541267-541921 9.16e-01 100 chrIV:568538-569276 6.66e-14 24_[+3(6.65e-09)]_14_[-1(3.95e-12)]_\ 14 chrIV:578983-580786 3.10e-02 100 chrIV:619683-620262 5.33e-05 56_[+1(3.68e-09)]_17 chrIV:644938-645388 1.68e-07 49_[+1(1.16e-10)]_24 chrIV:667712-668258 5.55e-01 100 chrIV:765312-765570 6.99e-01 100 chrIV:802526-803014 1.77e-14 20_[+1(1.16e-10)]_14_[-3(1.01e-08)]_\ 18 chrIV:835759-836305 5.72e-01 100 chrIV:884177-884632 4.41e-10 6_[+3(1.15e-08)]_73 chrIV:915106-916206 5.72e-01 100 chrIV:946121-946615 1.15e-06 45_[-1(1.59e-09)]_28 chrIV:980735-981264 3.87e-02 100 chrIV:992612-993064 1.68e-08 43_[+3(2.19e-08)]_36 chrIV:1012663-1013946 9.59e-01 100 chrIV:1016955-1017520 2.29e-11 29_[+1(2.40e-11)]_14_[-3(4.08e-07)]_\ 9 chrIV:1017702-1017897 7.29e-01 100 chrIV:1021535-1022123 8.27e-01 100 chrIV:1075265-1075781 1.28e-10 8_[+1(2.36e-10)]_15_[-3(3.27e-06)]_\ 29 chrIV:1094974-1095698 7.70e-01 100 chrIV:1150207-1151186 7.07e-01 100 chrIV:1175589-1176078 1.31e-05 50_[+2(1.87e-07)]_29 chrIV:1201469-1202395 8.12e-01 100 chrIV:1233491-1234284 8.42e-01 100 chrIV:1256856-1257310 2.76e-05 25_[-3(3.48e-07)]_54 chrIV:1278707-1278953 7.00e-01 100 chrIV:1300911-1301344 8.27e-01 100 chrIV:1305347-1306201 8.82e-01 100 chrIV:1319133-1319815 9.63e-01 100 chrIV:1352323-1352736 1.13e-06 33_[-2(1.77e-08)]_46 chrIV:1354426-1356099 6.45e-01 100 chrIV:1359187-1361238 3.84e-01 100 chrIV:1401202-1402201 2.64e-01 100 chrIV:1402396-1403370 8.56e-01 100 chrIV:1450202-1451258 1.40e-01 100 chrIV:1461473-1462094 2.49e-06 70_[-2(1.77e-08)]_9 chrIV:1488795-1489908 9.94e-01 100 chrIV:1524132-1525659 1.58e-03 12_[-2(1.31e-06)]_67 chrIX:0-256 4.83e-01 100 chrIX:68170-69557 9.58e-01 100 chrIX:99618-100081 3.09e-01 100 chrIX:131855-132058 8.15e-01 100 chrIX:174815-175253 2.88e-08 51_[+2(1.62e-09)]_28 chrIX:182860-183721 6.98e-01 100 chrIX:197340-197959 4.76e-07 27_[-1(2.40e-11)]_46 chrIX:210510-211221 6.64e-01 100 chrIX:248618-249371 5.15e-01 100 chrIX:254206-254560 3.03e-01 100 chrIX:257353-258154 8.24e-01 100 chrIX:300011-300504 2.06e-14 30_[+1(8.64e-12)]_10_[-2(1.77e-08)]_\ 12 chrIX:324171-324618 4.07e-06 9_[-3(1.15e-08)]_70 chrIX:325490-326097 1.64e-14 9_[+2(1.62e-09)]_10_[-1(1.16e-10)]_\ 33 chrIX:336136-336646 1.97e-10 17_[+1(1.06e-07)]_14_[-3(1.15e-08)]_\ 21 chrIX:370205-370683 4.17e-11 22_[+3(6.38e-07)]_14_[-1(2.40e-11)]_\ 16 chrIX:394756-395034 7.03e-01 100 chrIX:438580-439886 4.88e-01 100 chrV:6156-6594 9.28e-01 100 chrV:51997-52896 8.66e-01 100 chrV:53512-54243 4.40e-01 100 chrV:61031-62178 6.18e-01 100 chrV:67137-68507 2.47e-01 100 chrV:69111-69302 6.74e-02 100 chrV:85122-85460 7.83e-02 100 chrV:85671-86887 9.95e-01 100 chrV:99861-100344 3.40e-01 100 chrV:110526-111063 6.03e-01 100 chrV:117649-118312 5.52e-01 100 chrV:130814-131422 3.70e-13 23_[+1(2.36e-10)]_14_[-3(1.22e-07)]_\ 15 chrV:135160-135703 9.23e-08 53_[+1(8.64e-12)]_20 chrV:138431-140906 5.45e-01 100 chrV:152145-152968 9.95e-01 100 chrV:166727-167636 9.37e-01 100 chrV:176849-177481 4.04e-07 18_[-1(2.40e-11)]_55 chrV:178274-179035 8.96e-02 100 chrV:207109-207671 6.27e-09 16_[+3(5.46e-08)]_14_[-1(2.43e-07)]_\ 22 chrV:250101-251465 6.16e-01 100 chrV:270374-270683 9.91e-01 100 chrV:288185-288820 1.91e-08 46_[-2(8.16e-10)]_33 chrV:305809-306917 5.38e-01 100 chrV:311763-312291 9.29e-08 55_[+1(5.43e-12)]_18 chrV:321802-323104 6.13e-01 100 chrV:354694-355384 5.65e-02 100 chrV:362037-362484 9.25e-01 100 chrV:363800-364503 4.73e-01 100 chrV:396162-396574 9.95e-01 100 chrV:406585-409349 8.09e-01 100 chrV:423069-424314 1.52e-02 100 chrV:430955-431572 4.04e-02 31_[+1(7.93e-05)]_42 chrV:434383-434773 6.27e-09 22_[+1(2.43e-07)]_14_[-3(5.46e-08)]_\ 16 chrV:435564-436041 2.06e-14 9_[+1(8.64e-12)]_10_[-2(1.77e-08)]_\ 33 chrV:438467-438992 6.68e-13 25_[+2(1.22e-08)]_11_[-1(2.97e-10)]_\ 16 chrV:441788-442644 8.12e-01 100 chrV:443008-443478 1.72e-18 18_[+1(8.40e-13)]_11_[-2(3.90e-11)]_\ 23 chrV:469250-469813 4.86e-06 12_[-1(2.97e-10)]_61 chrV:487092-487650 4.17e-11 19_[+1(2.40e-11)]_14_[-3(6.38e-07)]_\ 19 chrV:492185-492569 9.10e-13 34_[+1(3.68e-09)]_10_[-2(1.43e-07)]_\ 8 chrV:522759-522961 6.26e-01 100 chrV:551054-551592 1.72e-18 21_[+1(8.40e-13)]_11_[-2(3.90e-11)]_\ 20 chrVI:4463-5874 2.32e-01 100 chrVI:64198-65392 7.18e-01 100 chrVI:82536-84445 8.94e-01 100 chrVI:95479-95885 4.20e-02 23_[+2(8.91e-05)]_56 chrVI:101089-101616 9.82e-07 73_[+3(1.50e-08)]_6 chrVI:136985-137867 3.72e-01 100 chrVI:148005-148439 6.69e-02 100 chrVI:157669-158251 1.38e-11 15_[+1(2.56e-09)]_29_[-2(1.77e-08)]_\ 8 chrVI:162022-162442 1.68e-08 45_[+3(2.19e-08)]_34 chrVI:167238-167700 7.25e-10 22_[+2(3.60e-07)]_26_[-1(1.59e-09)]_\ 4 chrVI:180615-181274 9.74e-01 100 chrVI:191291-191831 8.20e-07 76_[-2(6.81e-10)]_3 chrVI:204786-205215 4.47e-09 20_[-2(8.16e-10)]_59 chrVI:210428-210902 7.25e-10 13_[+1(1.59e-09)]_26_[-2(3.60e-07)]_\ 13 chrVI:221720-222076 6.37e-01 100 chrVI:223255-224154 3.23e-01 100 chrVI:226470-226940 1.14e-12 42_[+1(8.64e-12)]_10_[-2(1.77e-08)] chrVI:269463-270159 8.56e-02 100 chrVII:12-1265 7.11e-01 100 chrVII:10134-10455 5.28e-02 100 chrVII:73688-74249 9.97e-05 20_[+3(1.69e-06)]_59 chrVII:110389-110928 6.27e-09 26_[+1(2.43e-07)]_14_[-3(5.46e-08)]_\ 12 chrVII:115247-115780 5.62e-08 29_[+2(2.24e-09)]_50 chrVII:121972-122574 1.13e-06 50_[+2(1.77e-08)]_29 chrVII:148151-149547 9.30e-01 100 chrVII:185511-186082 1.13e-06 14_[-2(1.77e-08)]_65 chrVII:205297-205842 3.00e-06 6_[+2(1.77e-08)]_73 chrVII:254099-254732 6.78e-01 100 chrVII:276909-278704 4.73e-01 100 chrVII:287085-287808 6.96e-04 38_[-3(3.21e-07)]_41 chrVII:291603-292021 5.46e-01 100 chrVII:310384-312428 7.11e-01 100 chrVII:319584-320147 4.08e-04 [-1(2.43e-07)]_73 chrVII:328353-329172 4.45e-01 100 chrVII:345880-346728 9.84e-01 100 chrVII:364910-366694 8.71e-01 100 chrVII:371239-371480 3.10e-01 100 chrVII:400869-401780 1.24e-01 100 chrVII:405273-405800 6.31e-08 18_[-1(3.95e-12)]_55 chrVII:412110-412588 6.68e-13 4_[+1(2.97e-10)]_11_[-2(1.22e-08)]_\ 37 chrVII:422838-423550 2.24e-01 100 chrVII:438573-439925 9.85e-01 100 chrVII:440270-442109 7.69e-02 100 chrVII:479152-482838 5.91e-02 100 chrVII:531415-531794 1.32e-06 55_[+3(1.15e-08)]_24 chrVII:533271-535226 7.67e-01 100 chrVII:541625-542187 1.81e-07 28_[-1(2.40e-11)]_45 chrVII:544388-544928 4.09e-06 19_[-3(1.15e-08)]_60 chrVII:545096-546156 7.02e-01 100 chrVII:555085-556726 7.77e-01 100 chrVII:561323-561951 8.44e-01 100 chrVII:609301-609904 9.79e-01 100 chrVII:648772-649393 4.89e-01 100 chrVII:661510-661952 1.37e-05 67_[+3(1.15e-08)]_12 chrVII:700117-701268 3.27e-05 37_[+2(9.90e-08)]_42 chrVII:706919-707350 1.40e-10 33_[+1(2.72e-08)]_14_[-3(1.32e-08)]_\ 5 chrVII:726259-728180 5.91e-01 100 chrVII:730941-731437 1.45e-11 2_[+2(1.38e-09)]_11_[-1(1.07e-09)]_\ 39 chrVII:736185-736608 4.56e-08 28_[-1(3.95e-12)]_45 chrVII:738890-739392 1.72e-18 35_[+2(3.90e-11)]_11_[-1(8.40e-13)]_\ 6 chrVII:771984-772262 4.89e-01 100 chrVII:774108-774622 6.39e-15 38_[+2(8.16e-10)]_10_[-1(1.47e-10)]_\ 4 chrVII:779389-779924 6.23e-13 9_[+3(1.61e-09)]_14_[-1(3.08e-09)]_\ 29 chrVII:788310-788783 5.68e-01 100 chrVII:794022-794605 9.42e-01 100 chrVII:823265-823699 2.17e-06 54_[+2(1.22e-08)]_25 chrVII:828286-829008 3.29e-01 100 chrVII:845404-845929 2.59e-15 32_[+3(2.19e-08)]_13_[-1(7.00e-11)]_\ 7 chrVII:856742-856956 1.38e-01 100 chrVII:857219-857655 7.29e-06 78_[-2(1.77e-08)]_1 chrVII:876035-876803 2.06e-14 29_[+2(1.77e-08)]_10_[-1(8.64e-12)]_\ 13 chrVII:878594-879051 6.96e-04 22_[-3(3.21e-07)]_57 chrVII:882312-883935 3.00e-01 100 chrVII:914858-915196 1.69e-01 100 chrVII:919929-920219 9.74e-01 100 chrVII:930724-931227 2.59e-15 37_[+1(7.00e-11)]_13_[-3(2.19e-08)]_\ 2 chrVII:986858-987070 2.83e-01 100 chrVII:1000358-1000570 6.58e-02 100 chrVII:1003989-1004423 9.92e-06 59_[+3(1.15e-08)]_20 chrVIII:62500-63032 6.27e-09 38_[+3(5.46e-08)]_14_[-1(2.43e-07)] chrVIII:74890-75907 9.14e-01 100 chrVIII:85103-85573 6.68e-13 19_[+1(2.97e-10)]_11_[-2(1.22e-08)]_\ 22 chrVIII:103857-104295 8.22e-01 100 chrVIII:115892-116431 1.64e-14 5_[+1(1.16e-10)]_10_[-2(1.62e-09)]_\ 37 chrVIII:125889-127487 9.23e-01 100 chrVIII:132786-133392 1.45e-08 42_[-2(1.05e-10)]_37 chrVIII:133582-133753 6.61e-01 100 chrVIII:134037-134575 2.78e-08 64_[+3(1.01e-08)]_15 chrVIII:145895-146451 7.50e-01 100 chrVIII:148928-149330 3.61e-01 100 chrVIII:175063-175392 3.12e-01 100 chrVIII:237731-238166 3.44e-06 15_[-2(1.77e-08)]_64 chrVIII:296807-297249 7.93e-02 100 chrVIII:353252-353637 7.90e-01 100 chrVIII:358275-358784 1.38e-11 8_[+1(2.56e-09)]_29_[-2(1.77e-08)]_\ 15 chrVIII:375339-375902 6.66e-01 100 chrVIII:381458-383370 8.94e-02 100 chrVIII:388663-389230 1.32e-13 6_[+1(1.47e-10)]_45_[-3(1.50e-08)]_\ 1 chrVIII:410974-411701 2.11e-01 100 chrVIII:451337-453060 3.35e-01 100 chrVIII:455637-455849 4.20e-02 100 chrVIII:466627-467331 1.77e-05 60_[+3(1.15e-08)]_19 chrVIII:475482-475908 1.70e-06 70_[+1(2.36e-10)]_3 chrVIII:505821-506245 8.10e-01 100 chrVIII:555844-557211 4.96e-02 27_[+3(5.91e-05)]_52 chrVIII:562262-562581 9.38e-01 100 chrX:58949-59485 3.00e-01 100 chrX:73359-74366 3.53e-01 100 chrX:74547-76485 4.27e-01 100 chrX:90028-90443 9.31e-01 100 chrX:115453-116220 1.06e-02 100 chrX:139109-140366 7.41e-01 100 chrX:157426-157949 4.66e-01 100 chrX:160025-160278 5.45e-01 100 chrX:197098-197616 6.39e-15 15_[+1(1.47e-10)]_10_[-2(8.16e-10)]_\ 27 chrX:204481-205035 1.97e-10 26_[+3(1.15e-08)]_14_[-1(1.06e-07)]_\ 12 chrX:227785-228616 9.36e-01 100 chrX:233674-234351 4.51e-06 12_[-1(4.63e-10)]_61 chrX:265334-265674 7.87e-01 100 chrX:291162-291402 4.38e-01 100 chrX:349071-349442 6.01e-01 100 chrX:353923-354561 3.22e-04 56_[+2(3.60e-07)]_23 chrX:355139-355724 1.33e-14 27_[-1(3.95e-12)]_20_[+3(1.15e-08)]_\ 5 chrX:374198-374848 1.12e-13 1_[-3(1.15e-08)]_20_[+1(3.95e-12)]_\ 31 chrX:378067-378582 5.78e-01 100 chrX:390837-391328 5.51e-11 20_[+1(2.12e-09)]_10_[-2(1.87e-07)]_\ 22 chrX:391833-392105 2.81e-01 100 chrX:396392-397023 3.97e-01 100 chrX:414735-415266 2.06e-14 20_[+2(1.77e-08)]_10_[-1(8.64e-12)]_\ 22 chrX:415769-416282 9.39e-05 40_[-3(3.21e-07)]_39 chrX:422579-423299 1.31e-05 52_[+2(1.87e-07)]_27 chrX:424304-424750 1.48e-08 12_[-2(2.62e-09)]_67 chrX:436057-436286 4.13e-01 100 chrX:453346-453971 6.07e-01 100 chrX:517640-518154 7.69e-04 16_[-3(3.21e-07)]_63 chrX:523853-524341 1.45e-08 20_[-2(1.05e-10)]_59 chrX:531541-532182 2.59e-15 16_[+3(2.19e-08)]_13_[-1(7.00e-11)]_\ 23 chrX:538353-538902 5.03e-06 12_[-1(2.10e-10)]_61 chrX:541319-541992 9.42e-01 100 chrX:542770-543368 6.34e-01 100 chrX:545453-545673 3.04e-01 100 chrX:607764-609039 4.74e-01 100 chrX:617756-618223 2.11e-01 100 chrX:651159-651617 6.89e-01 100 chrX:663690-664408 3.81e-01 100 chrX:683688-684337 5.35e-01 100 chrX:690581-690831 1.53e-02 100 chrX:703252-703653 9.54e-01 100 chrX:745249-745745 7.14e-01 100 chrXI:0-1089 6.60e-04 59_[+2(7.93e-07)]_20 chrXI:46548-47031 2.84e-12 5_[+1(2.08e-11)]_14_[-3(1.77e-07)]_\ 33 chrXI:67794-68370 8.36e-01 100 chrXI:74383-74979 6.72e-06 29_[-1(1.07e-09)]_44 chrXI:83939-84455 1.48e-08 65_[+2(2.62e-09)]_14 chrXI:99739-99915 3.41e-01 100 chrXI:108697-109090 5.55e-01 100 chrXI:140739-142168 7.21e-01 100 chrXI:158149-159295 6.71e-01 100 chrXI:162287-162800 6.66e-14 3_[+1(3.95e-12)]_14_[-3(6.65e-09)]_\ 35 chrXI:202815-203333 9.22e-09 10_[-1(8.64e-12)]_63 chrXI:219589-220089 9.70e-01 100 chrXI:302564-303227 3.52e-04 72_[+3(3.21e-07)]_7 chrXI:307992-308432 1.16e-06 29_[-2(1.22e-08)]_50 chrXI:313026-313688 2.79e-01 100 chrXI:322439-322678 6.30e-01 100 chrXI:326092-327556 2.54e-01 100 chrXI:379458-379921 1.03e-06 45_[+2(1.22e-08)]_34 chrXI:382193-382467 4.47e-02 100 chrXI:430564-431674 9.62e-01 100 chrXI:458340-458964 1.10e-01 100 chrXI:490721-491399 9.98e-01 100 chrXI:513190-513652 7.60e-07 11_[-3(1.15e-08)]_68 chrXI:517771-518111 9.51e-01 100 chrXI:533582-534188 8.85e-01 100 chrXI:578768-579348 1.17e-06 15_[-1(5.75e-10)]_58 chrXI:614177-614417 6.55e-01 100 chrXI:617725-619364 8.23e-01 100 chrXI:665596-666804 5.46e-01 100 chrXII:5-277 3.23e-01 100 chrXII:5452-5942 5.28e-01 100 chrXII:11011-12005 2.95e-04 74_[-2(4.19e-07)]_5 chrXII:48547-49141 4.77e-01 100 chrXII:65156-65697 9.99e-01 100 chrXII:84126-84477 7.71e-01 100 chrXII:88226-88454 9.89e-01 100 chrXII:92232-92946 3.66e-07 8_[+3(1.50e-08)]_71 chrXII:97170-97852 8.75e-01 100 chrXII:167643-168268 7.11e-02 100 chrXII:198421-199680 5.64e-01 100 chrXII:211686-212353 3.51e-01 100 chrXII:214639-215162 2.36e-14 42_[+1(5.43e-12)]_10_[-2(3.14e-10)] chrXII:232069-234161 5.93e-01 100 chrXII:241397-242017 8.02e-01 100 chrXII:262685-263960 7.50e-01 100 chrXII:282445-283870 9.38e-01 100 chrXII:348201-348698 4.55e-01 100 chrXII:366007-366568 1.16e-02 44_[+1(2.16e-05)]_29 chrXII:369195-370210 7.29e-01 100 chrXII:370569-370931 4.33e-01 100 chrXII:374200-374664 4.68e-06 8_[-1(3.68e-09)]_65 chrXII:424203-424444 7.64e-01 100 chrXII:426858-427459 1.97e-10 23_[+3(1.15e-08)]_14_[-1(1.06e-07)]_\ 15 chrXII:448495-449005 2.25e-05 [-3(1.01e-08)]_79 chrXII:459635-460692 1.82e-01 100 chrXII:468764-468961 7.17e-07 47_[+2(1.31e-06)]_2_[+3(1.93e-07)]_\ 9 chrXII:489295-489557 7.17e-07 19_[+2(1.31e-06)]_2_[+3(1.93e-07)]_\ 37 chrXII:498305-499693 1.14e-01 100 chrXII:522145-522455 9.07e-01 100 chrXII:522637-523331 1.17e-01 100 chrXII:592122-593112 4.82e-08 26_[-2(6.81e-10)]_53 chrXII:605136-605654 4.41e-10 66_[-3(1.15e-08)]_13 chrXII:628123-628661 3.00e-06 45_[+2(1.77e-08)]_34 chrXII:636725-640160 3.24e-01 100 chrXII:651032-651247 4.24e-01 100 chrXII:656707-657213 6.39e-15 33_[+1(1.47e-10)]_10_[-2(8.16e-10)]_\ 9 chrXII:673119-674561 4.99e-01 100 chrXII:687648-688161 6.68e-13 14_[+1(2.97e-10)]_11_[-2(1.22e-08)]_\ 27 chrXII:710363-710963 5.16e-01 100 chrXII:712248-713621 9.72e-01 100 chrXII:731897-732264 4.82e-08 64_[+2(6.81e-10)]_15 chrXII:734699-735017 1.44e-09 30_[-1(8.40e-13)]_43 chrXII:780772-781901 2.89e-01 100 chrXII:784133-784570 4.30e-08 57_[+2(6.81e-10)]_22 chrXII:793710-795614 8.05e-02 100 chrXII:795838-797403 4.25e-01 100 chrXII:818284-820427 2.44e-02 65_[+1(8.39e-05)]_8 chrXII:837681-839381 9.73e-01 100 chrXII:855769-857590 8.79e-01 100 chrXII:875200-875615 6.61e-08 23_[+2(2.24e-09)]_56 chrXII:897631-899631 1.38e-01 100 chrXII:903405-903644 4.82e-01 100 chrXII:921733-922575 2.97e-01 100 chrXII:932074-932548 7.55e-01 100 chrXII:962792-963397 6.01e-01 100 chrXII:975780-976262 1.71e-13 21_[+1(1.07e-09)]_11_[-2(1.38e-09)]_\ 20 chrXII:1018813-1019435 9.99e-01 100 chrXII:1028152-1028577 9.55e-01 100 chrXII:1051908-1052650 4.17e-01 100 chrXII:1064027-1065368 2.78e-01 100 chrXIII:21-194 3.18e-01 100 chrXIII:23730-25899 7.41e-01 100 chrXIII:91569-92104 7.75e-01 100 chrXIII:122946-124723 6.09e-02 48_[+1(1.83e-05)]_25 chrXIII:131507-132122 6.41e-08 70_[+1(3.95e-12)]_3 chrXIII:145784-146287 9.94e-01 100 chrXIII:161840-164333 4.41e-01 100 chrXIII:168590-169690 4.15e-01 100 chrXIII:183781-184191 1.68e-08 11_[-3(2.19e-08)]_68 chrXIII:195903-196407 3.66e-07 44_[-3(1.50e-08)]_35 chrXIII:224050-224428 6.56e-01 100 chrXIII:225304-226696 5.63e-01 100 chrXIII:259009-259592 7.46e-01 100 chrXIII:267641-268439 4.86e-01 100 chrXIII:290411-291141 5.01e-04 74_[+3(6.38e-07)]_5 chrXIII:296397-298971 3.70e-01 100 chrXIII:302836-303093 4.50e-01 100 chrXIII:320938-321328 2.98e-06 73_[+1(1.47e-10)] chrXIII:352065-352518 5.43e-06 43_[+2(1.77e-08)]_36 chrXIII:362843-363312 4.37e-09 36_[+3(5.46e-08)]_14_[-1(2.43e-07)]_\ 2 chrXIII:372185-372723 3.63e-06 50_[+1(2.97e-10)]_23 chrXIII:378911-379657 4.01e-01 100 chrXIII:420311-420872 1.34e-06 56_[+1(2.97e-10)]_17 chrXIII:463266-463902 1.97e-10 19_[+3(1.15e-08)]_14_[-1(1.06e-07)]_\ 19 chrXIII:480232-480904 2.97e-01 100 chrXIII:499088-500311 7.53e-01 100 chrXIII:504652-505219 3.00e-06 14_[+2(1.77e-08)]_65 chrXIII:550702-553262 6.98e-01 100 chrXIII:572696-573157 5.51e-11 16_[+1(2.12e-09)]_10_[-2(1.87e-07)]_\ 26 chrXIII:586391-587084 2.02e-03 4_[-2(3.68e-05)]_75 chrXIII:626199-626945 7.82e-01 100 chrXIII:631765-633903 9.79e-01 100 chrXIII:650727-651866 9.00e-01 100 chrXIII:652039-652931 9.34e-01 100 chrXIII:731760-733563 6.11e-01 100 chrXIII:747737-748161 6.66e-14 2_[+1(3.95e-12)]_14_[-3(6.65e-09)]_\ 36 chrXIII:754407-754859 7.20e-01 100 chrXIII:761363-763112 8.01e-01 100 chrXIII:767910-768645 5.79e-02 100 chrXIII:807734-808559 9.63e-01 100 chrXIII:837727-838317 2.02e-05 7_[-1(1.59e-09)]_66 chrXIII:861215-861554 5.13e-01 100 chrXIII:872703-872941 4.56e-01 100 chrXIII:923191-924377 1.81e-04 37_[-2(5.23e-07)]_42 chrXIV:6486-7183 4.33e-01 100 chrXIV:62006-63574 6.04e-01 100 chrXIV:88929-90082 7.73e-02 49_[-3(9.85e-05)]_30 chrXIV:96036-96620 9.77e-08 13_[-3(1.61e-09)]_3_[+3(8.11e-06)]_\ 42 chrXIV:102492-102972 1.71e-13 38_[+2(1.38e-09)]_11_[-1(1.07e-09)]_\ 3 chrXIV:104568-105129 1.64e-14 11_[+2(1.62e-09)]_10_[-1(1.16e-10)]_\ 31 chrXIV:173955-174612 1.83e-01 100 chrXIV:229408-230800 5.52e-01 100 chrXIV:241381-241754 4.70e-01 100 chrXIV:330514-331120 8.01e-01 100 chrXIV:374659-375103 5.67e-07 42_[+2(9.43e-09)]_37 chrXIV:392351-392713 8.86e-01 100 chrXIV:415190-416060 9.73e-01 100 chrXIV:416243-416493 9.18e-01 100 chrXIV:442782-444824 8.00e-01 100 chrXIV:493889-495638 8.91e-01 100 chrXIV:499272-500775 3.87e-01 100 chrXIV:546946-547420 9.85e-07 26_[-1(1.47e-10)]_47 chrXIV:560490-561185 7.29e-02 100 chrXIV:567886-568639 7.79e-01 100 chrXIV:569667-570160 1.72e-18 13_[+1(8.40e-13)]_11_[-2(3.90e-11)]_\ 28 chrXIV:585490-586580 6.89e-01 100 chrXIV:602091-602530 1.70e-09 7_[+2(3.55e-05)]_28_[+2(3.90e-11)]_\ 23 chrXIV:619744-620056 8.86e-01 100 chrXIV:631493-632142 9.98e-01 100 chrXIV:632385-632903 1.71e-13 9_[+2(1.38e-09)]_11_[-1(1.07e-09)]_\ 32 chrXIV:716035-716645 7.63e-01 100 chrXIV:725664-726419 7.68e-01 100 chrXIV:783384-784322 6.46e-03 20_[+2(3.85e-06)]_59 chrXV:3-999 9.27e-01 100 chrXV:79593-80143 5.87e-01 100 chrXV:92124-94875 4.12e-01 100 chrXV:109582-110054 4.81e-01 100 chrXV:110240-110658 6.62e-01 100 chrXV:110843-111271 4.74e-07 5_[-3(1.61e-09)]_74 chrXV:113515-114247 2.50e-06 6_[-1(1.16e-10)]_67 chrXV:159282-160700 4.79e-01 100 chrXV:161085-161442 2.34e-01 100 chrXV:167949-168518 8.54e-01 100 chrXV:216245-216692 5.41e-01 100 chrXV:226353-226918 2.59e-15 35_[+1(7.00e-11)]_13_[-3(2.19e-08)]_\ 4 chrXV:228081-228612 1.71e-13 39_[+2(1.38e-09)]_11_[-1(1.07e-09)]_\ 2 chrXV:252875-254365 6.05e-01 100 chrXV:274455-275036 1.84e-01 100 chrXV:281720-282491 5.31e-01 100 chrXV:287813-288415 3.64e-01 100 chrXV:300849-301613 9.84e-01 100 chrXV:340107-340590 9.10e-13 10_[+1(3.68e-09)]_10_[-2(1.43e-07)]_\ 32 chrXV:353696-354343 9.22e-01 100 chrXV:407679-408174 9.13e-01 100 chrXV:409605-410014 9.60e-01 100 chrXV:438438-438984 1.42e-06 40_[-1(5.75e-10)]_33 chrXV:464228-464692 3.66e-07 39_[+3(1.50e-08)]_40 chrXV:487210-487711 1.71e-13 33_[+2(1.38e-09)]_11_[-1(1.07e-09)]_\ 8 chrXV:505020-505490 5.86e-01 100 chrXV:571716-572166 1.48e-06 66_[+3(1.15e-08)]_13 chrXV:594011-594648 5.23e-01 100 chrXV:619642-624654 7.18e-01 100 chrXV:639248-639435 3.32e-01 100 chrXV:663616-664126 6.68e-13 [+1(2.97e-10)]_11_[-2(1.22e-08)]_41 chrXV:677923-679206 8.91e-01 100 chrXV:710013-710488 7.01e-08 [+3(3.21e-07)]_14_[-1(1.12e-07)]_38 chrXV:759156-759574 9.86e-01 100 chrXV:762053-762438 8.42e-02 100 chrXV:778640-779450 9.65e-01 100 chrXV:779695-780943 6.64e-01 100 chrXV:832356-832714 3.14e-01 100 chrXV:842416-842938 2.64e-02 54_[+2(9.22e-05)]_25 chrXV:853981-854442 3.28e-17 35_[+1(5.43e-12)]_10_[-2(3.14e-10)]_\ 7 chrXV:866519-868120 9.51e-01 100 chrXV:877770-877991 5.83e-01 100 chrXV:900088-901236 7.77e-01 100 chrXV:901449-901674 7.46e-01 100 chrXV:925227-925413 2.21e-01 100 chrXV:968119-968432 3.64e-01 100 chrXV:976171-976852 8.35e-01 100 chrXV:978809-979127 2.46e-01 100 chrXV:980482-981280 9.44e-01 100 chrXV:1003933-1004979 8.46e-01 100 chrXV:1025690-1026253 9.26e-01 100 chrXV:1027802-1029574 5.43e-01 100 chrXV:1070827-1071220 6.89e-01 100 chrXVI:55814-56518 1.32e-04 62_[+1(9.38e-09)]_11 chrXVI:75470-76741 9.88e-01 100 chrXVI:98485-99152 4.69e-01 100 chrXVI:135514-135838 9.63e-01 100 chrXVI:172847-174053 9.51e-01 100 chrXVI:188581-189174 4.13e-03 26_[+2(3.81e-05)]_53 chrXVI:209800-210588 4.04e-07 57_[+1(2.40e-11)]_16 chrXVI:280606-282960 3.65e-01 100 chrXVI:302551-304238 9.59e-03 100 chrXVI:338662-339226 1.68e-03 4_[-3(3.21e-07)]_75 chrXVI:352312-353019 8.67e-01 100 chrXVI:377936-378460 6.85e-01 100 chrXVI:378651-379024 3.34e-01 100 chrXVI:404560-405752 9.20e-02 100 chrXVI:406199-407778 9.72e-01 100 chrXVI:435498-436195 9.96e-01 100 chrXVI:520128-520571 2.18e-01 100 chrXVI:560001-560509 1.38e-11 2_[+1(2.56e-09)]_29_[-2(1.77e-08)]_\ 21 chrXVI:572007-572579 2.59e-15 25_[+3(2.19e-08)]_13_[-1(7.00e-11)]_\ 14 chrXVI:575114-575550 9.74e-01 100 chrXVI:581821-582482 6.49e-01 100 chrXVI:622296-622867 1.38e-11 18_[+1(2.56e-09)]_29_[-2(1.77e-08)]_\ 5 chrXVI:645369-645690 6.01e-01 100 chrXVI:653813-655004 6.79e-01 100 chrXVI:689347-689872 1.91e-08 10_[+2(8.16e-10)]_69 chrXVI:699905-700711 9.54e-01 100 chrXVI:701861-702406 3.99e-01 100 chrXVI:718432-719410 2.19e-01 100 chrXVI:731635-732320 1.88e-01 100 chrXVI:743953-744660 8.50e-11 27_[+3(1.15e-08)]_14_[-1(1.50e-08)]_\ 11 chrXVI:768930-769511 1.42e-06 46_[+1(5.75e-10)]_27 chrXVI:775634-776194 6.47e-01 100 chrXVI:794443-795812 5.51e-01 100 chrXVI:810460-810880 2.25e-07 60_[+2(1.38e-09)]_19 chrXVI:819293-819834 1.72e-18 20_[+2(3.90e-11)]_11_[-1(8.40e-13)]_\ 21 chrXVI:821672-822096 9.72e-01 100 chrXVI:856756-857123 6.39e-15 17_[+2(8.16e-10)]_10_[-1(1.47e-10)]_\ 25 chrXVI:860136-860644 2.59e-15 38_[+3(2.19e-08)]_13_[-1(7.00e-11)]_\ 1 chrXVI:866335-866758 8.85e-01 100 chrXVI:880130-880587 3.42e-09 35_[-2(3.90e-11)]_44 chrXVI:901490-901967 3.65e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************