******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/AWRI1631--SWI1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrII:372846-373743 1.0000 100 chrVIII:237636-238361 1.0000 100 chrXV:159255-160142 1.0000 100 chrVII:328373-328987 1.0000 100 chrXI:457607-458982 1.0000 100 chrI:166172-166688 1.0000 100 chrIV:1467451-1469688 1.0000 100 chrXVI:821600-824090 1.0000 100 chrXIII:758945-760159 1.0000 100 chrVII:574788-575258 1.0000 100 chrVII:478990-482993 1.0000 100 chrXI:614851-615294 1.0000 100 chrIV:802541-803008 1.0000 100 chrIII:151014-151607 1.0000 100 chrXVI:452804-454322 1.0000 100 chrIV:1175584-1176110 1.0000 100 chrXII:92337-92833 1.0000 100 chrV:42157-42626 1.0000 100 chrXIV:575983-577518 1.0000 100 chrIV:1075155-1075748 1.0000 100 chrXII:603373-604087 1.0000 100 chrII:164746-165836 1.0000 100 chrII:347402-347936 1.0000 100 chrXII:48692-49115 1.0000 100 chrXVI:213051-215223 1.0000 100 chrVII:515861-518087 1.0000 100 chrXV:841598-842973 1.0000 100 chrXII:282592-283993 1.0000 100 chrVII:882423-884116 1.0000 100 chrXV:903465-906343 1.0000 100 chrXIII:278928-280550 1.0000 100 chrV:305810-306922 1.0000 100 chrXVI:622244-622875 1.0000 100 chrII:604050-607131 1.0000 100 chrIV:974130-974945 1.0000 100 chrXV:796727-798841 1.0000 100 chrIV:1016950-1017542 1.0000 100 chrXIII:878556-881132 1.0000 100 chrVII:319228-320141 1.0000 100 chrXII:855251-857604 1.0000 100 chrVIII:381374-383477 1.0000 100 chrXI:21315-21788 1.0000 100 chrVII:436715-438290 1.0000 100 chrVIII:505813-506221 1.0000 100 chrXII:1012063-1012486 1.0000 100 chrXIII:372172-372666 1.0000 100 chrXIV:374669-375199 1.0000 100 chrXIV:738674-740139 1.0000 100 chrVII:533715-535199 1.0000 100 chrXVI:785640-786089 1.0000 100 chrXIII:251858-252976 1.0000 100 chrIX:248618-249446 1.0000 100 chrXV:758974-759599 1.0000 100 chrXIII:362941-363415 1.0000 100 chrVII:989762-990438 1.0000 100 chrXII:198313-199713 1.0000 100 chrX:540868-540968 1.0000 100 chrVII:291688-291991 1.0000 100 chrXVI:340339-340965 1.0000 100 chrVII:149718-149967 1.0000 100 chrII:36234-36849 1.0000 100 chrXII:962765-963293 1.0000 100 chrXII:262794-264589 1.0000 100 chrXI:302667-303234 1.0000 100 chrV:435611-436021 1.0000 100 chrIV:1233321-1234283 1.0000 100 chrVII:405466-405922 1.0000 100 chrXIII:498976-501356 1.0000 100 chrXIV:241390-241789 1.0000 100 chrXIII:253180-253775 1.0000 100 chrXII:712230-713586 1.0000 100 chrVIII:74782-76425 1.0000 100 chrXI:379692-380093 1.0000 100 chrIII:149463-150222 1.0000 100 chrXIII:168234-169057 1.0000 100 chrXVI:378662-378994 1.0000 100 chrV:461156-462397 1.0000 100 chrXII:645290-646293 1.0000 100 chrIV:1359157-1361290 1.0000 100 chrXII:423722-425265 1.0000 100 chrVII:422886-423593 1.0000 100 chrXVI:572022-572750 1.0000 100 chrVII:147923-149545 1.0000 100 chrIII:57442-59131 1.0000 100 chrVII:914781-915283 1.0000 100 chrXII:628143-628687 1.0000 100 chrII:87845-88590 1.0000 100 chrXIII:90909-92128 1.0000 100 chrXV:1005495-1006065 1.0000 100 chrVIII:148953-149315 1.0000 100 chrVII:345831-346656 1.0000 100 chrXI:312414-314034 1.0000 100 chrXVI:66956-67508 1.0000 100 chrIV:434053-435022 1.0000 100 chrXV:287822-288559 1.0000 100 chrVII:828414-828991 1.0000 100 chrIII:168091-168542 1.0000 100 chrXII:728297-729744 1.0000 100 chrXVI:818604-819839 1.0000 100 chrX:90031-90131 1.0000 100 chrVII:260-953 1.0000 100 chrXII:299765-301305 1.0000 100 chrXVI:645167-646158 1.0000 100 chrIII:82153-83568 1.0000 100 chrII:197247-197837 1.0000 100 chrIII:77839-78925 1.0000 100 chrVIII:174628-175715 1.0000 100 chrXVI:927779-928127 1.0000 100 chrIV:216555-218079 1.0000 100 chrXV:252829-255104 1.0000 100 chrXIII:300868-303527 1.0000 100 chrIX:388110-389068 1.0000 100 chrVII:19764-20959 1.0000 100 chrI:81853-82318 1.0000 100 chrV:249768-250743 1.0000 100 chrIV:975884-977245 1.0000 100 chrXV:710124-710677 1.0000 100 chrXIII:162969-164610 1.0000 100 chrIX:385314-387383 1.0000 100 chrXV:594308-594658 1.0000 100 chrVII:876170-876761 1.0000 100 chrXIII:797854-798237 1.0000 100 chrVIII:410936-411712 1.0000 100 chrXVI:880067-880570 1.0000 100 chrVI:101122-101553 1.0000 100 chrVII:736181-736902 1.0000 100 chrXVI:66618-66797 1.0000 100 chrXIV:65950-66221 1.0000 100 chrXV:967985-968662 1.0000 100 chrXI:99019-102385 1.0000 100 chrVII:794207-794559 1.0000 100 chrX:702859-702959 1.0000 100 chrXII:793677-797516 1.0000 100 chrXII:521912-522431 1.0000 100 chrXVI:794452-796029 1.0000 100 chrXIII:837726-838244 1.0000 100 chrXIV:575165-575823 1.0000 100 chrIX:138000-139245 1.0000 100 chrVII:765953-766817 1.0000 100 chrXII:167749-168242 1.0000 100 chrXII:11254-11494 1.0000 100 chrV:469248-469658 1.0000 100 chrXII:231943-234275 1.0000 100 chrXV:837230-837431 1.0000 100 chrX:745037-745137 1.0000 100 chrIX:68247-68994 1.0000 100 chrVII:730585-730748 1.0000 100 chrXI:141696-143762 1.0000 100 chrIV:229432-231159 1.0000 100 chrIV:519656-520127 1.0000 100 chrIV:132215-133598 1.0000 100 chrVIII:114156-116403 1.0000 100 chrXIII:731451-733594 1.0000 100 chrXIII:258998-259383 1.0000 100 chrII:680359-682393 1.0000 100 chrV:487204-487593 1.0000 100 chrVII:785388-785783 1.0000 100 chrX:390774-390874 1.0000 100 chrIV:464804-466122 1.0000 100 chrIV:218301-218724 1.0000 100 chrI:69874-70438 1.0000 100 chrXIII:463345-463925 1.0000 100 chrVII:254118-254732 1.0000 100 chrIII:67556-68693 1.0000 100 chrXIII:267648-268867 1.0000 100 chrXII:673499-675141 1.0000 100 chrXIII:225298-226625 1.0000 100 chrVIII:400962-401405 1.0000 100 chrXI:108686-110446 1.0000 100 chrXV:281942-282545 1.0000 100 chrX:525856-525956 1.0000 100 chrXV:300913-301501 1.0000 100 chrXII:86881-87403 1.0000 100 chrXIV:392316-392743 1.0000 100 chrVIII:388631-389003 1.0000 100 chrXIV:662932-665555 1.0000 100 chrII:642855-643262 1.0000 100 chrXIV:585362-586590 1.0000 100 chrX:663378-663478 1.0000 100 chrVII:255185-255698 1.0000 100 chrII:88932-90123 1.0000 100 chrXVI:828743-829440 1.0000 100 chrVI:226297-226974 1.0000 100 chrVIII:451163-453052 1.0000 100 chrI:180940-181527 1.0000 100 chrIX:186502-188022 1.0000 100 chrXI:382147-382511 1.0000 100 chrV:130783-131397 1.0000 100 chrV:260237-262038 1.0000 100 chrXII:809047-814215 1.0000 100 chrXII:731300-732328 1.0000 100 chrIV:220963-222379 1.0000 100 chrIII:66-1038 1.0000 100 chrXII:366041-366554 1.0000 100 chrII:326557-327139 1.0000 100 chrVIII:358240-358765 1.0000 100 chrXV:226442-226889 1.0000 100 chrXI:158206-159747 1.0000 100 chrVIII:475476-475908 1.0000 100 chrV:430965-432192 1.0000 100 chrIV:992683-993183 1.0000 100 chrXIV:107013-107492 1.0000 100 chrXIII:352086-352639 1.0000 100 chrXIV:632400-632900 1.0000 100 chrVII:784630-785188 1.0000 100 chrXII:329391-329631 1.0000 100 chrVII:185186-185939 1.0000 100 chrX:607264-607364 1.0000 100 chrIV:1352298-1353441 1.0000 100 chrXIV:715383-716634 1.0000 100 chrXVI:575817-576517 1.0000 100 chrII:408366-409203 1.0000 100 chrXVI:519993-520827 1.0000 100 chrV:77488-79900 1.0000 100 chrXV:444598-446178 1.0000 100 chrXIII:183787-183972 1.0000 100 chrVI:220778-222058 1.0000 100 chrXVI:431733-434391 1.0000 100 chrVI:157845-158413 1.0000 100 chrXV:438381-438974 1.0000 100 chrXIII:872574-872952 1.0000 100 chrV:396192-396565 1.0000 100 chrXVI:678560-679903 1.0000 100 chrXVI:134555-134707 1.0000 100 chrVI:167258-167725 1.0000 100 chrXIV:104607-105114 1.0000 100 chrVII:364018-364432 1.0000 100 chrXII:932096-932536 1.0000 100 chrVII:531409-532186 1.0000 100 chrIX:370220-370696 1.0000 100 chrIX:126935-128797 1.0000 100 chrXV:1003891-1005281 1.0000 100 chrVII:786989-788767 1.0000 100 chrXV:908423-909056 1.0000 100 chrIV:930648-931426 1.0000 100 chrVII:276986-278733 1.0000 100 chrXIII:433488-433793 1.0000 100 chrVII:726380-728198 1.0000 100 chrXIII:747697-748143 1.0000 100 chrV:174736-174996 1.0000 100 chrIV:234178-235603 1.0000 100 chrII:350595-351138 1.0000 100 chrXI:74419-74817 1.0000 100 chrII:9366-9890 1.0000 100 chrXV:619148-623661 1.0000 100 chrVII:541709-542166 1.0000 100 chrXVI:775607-776071 1.0000 100 chrVIII:466654-467291 1.0000 100 chrIII:123341-123813 1.0000 100 chrXI:230890-231739 1.0000 100 chrXII:59-219 1.0000 100 chrIII:315608-316594 1.0000 100 chrXII:734566-735429 1.0000 100 chrV:66938-69611 1.0000 100 chrVII:23365-23566 1.0000 100 chrX:227751-227851 1.0000 100 chrXVI:768943-769499 1.0000 100 chrXVI:425078-425949 1.0000 100 chrXII:88204-88446 1.0000 100 chrXIII:306065-307157 1.0000 100 chrXV:677801-679146 1.0000 100 chrV:362086-362494 1.0000 100 chrVII:205304-206479 1.0000 100 chrXVI:172877-174106 1.0000 100 chrXIII:320950-321334 1.0000 100 chrVII:930782-931689 1.0000 100 chrVI:162007-162377 1.0000 100 chrII:544510-545120 1.0000 100 chrIV:1305392-1305928 1.0000 100 chrXVI:699847-700667 1.0000 100 chrIV:385186-387797 1.0000 100 chrXII:1028112-1028585 1.0000 100 chrXIII:555814-558230 1.0000 100 chrX:233693-233793 1.0000 100 chrIV:322181-323618 1.0000 100 chrVII:823342-823717 1.0000 100 chrVII:877656-879030 1.0000 100 chrXIV:351506-352968 1.0000 100 chrXIII:650735-652965 1.0000 100 chrXII:253119-255254 1.0000 100 chrXIV:525067-525294 1.0000 100 chrXV:228063-228594 1.0000 100 chrXII:805402-807154 1.0000 100 chrVII:427624-427919 1.0000 100 chrXII:897684-899691 1.0000 100 chrVII:848656-848970 1.0000 100 chrX:517644-517744 1.0000 100 chrXI:617617-619290 1.0000 100 chrIII:90858-91137 1.0000 100 chrIV:619704-620227 1.0000 100 chrIX:382035-382416 1.0000 100 chrV:207362-207887 1.0000 100 chrI:138956-139354 1.0000 100 chrVII:110316-110786 1.0000 100 chrIX:182920-183105 1.0000 100 chrIV:884246-884616 1.0000 100 chrIII:295320-296045 1.0000 100 chrII:266189-266690 1.0000 100 chrIV:1162422-1165742 1.0000 100 chrV:422764-425314 1.0000 100 chrXVI:74967-76747 1.0000 100 chrII:301126-301640 1.0000 100 chrIV:1013419-1013966 1.0000 100 chrV:135134-136170 1.0000 100 chrXII:924268-925086 1.0000 100 chrXI:518660-521152 1.0000 100 chrIV:83434-83828 1.0000 100 chrXI:430726-431642 1.0000 100 chrXIII:754451-754881 1.0000 100 chrXI:248264-248711 1.0000 100 chrXIII:540323-540911 1.0000 100 chrVII:1003993-1004431 1.0000 100 chrXVI:296996-297558 1.0000 100 chrII:226972-227344 1.0000 100 chrXV:79720-80129 1.0000 100 chrXIV:217238-217729 1.0000 100 chrXII:367975-371716 1.0000 100 chrXI:307876-308420 1.0000 100 chrIV:578874-580896 1.0000 100 chrIX:83940-85178 1.0000 100 chrIV:129887-131009 1.0000 100 chrVII:438569-439992 1.0000 100 chrXII:449141-450490 1.0000 100 chrXIV:355432-355742 1.0000 100 chrXVI:404513-408144 1.0000 100 chrI:68279-68929 1.0000 100 chrXII:65311-65737 1.0000 100 chrXVI:55759-56430 1.0000 100 chrXV:423750-425504 1.0000 100 chrVI:191300-191786 1.0000 100 chrXV:216277-216736 1.0000 100 chrXIV:546555-547593 1.0000 100 chrV:442998-443382 1.0000 100 chrXI:219716-220141 1.0000 100 chrXV:832217-832847 1.0000 100 chrIV:538848-539591 1.0000 100 chrXIV:102570-103211 1.0000 100 chrXV:987077-989627 1.0000 100 chrXII:710537-710897 1.0000 100 chrXV:110842-111209 1.0000 100 chrIV:411079-411668 1.0000 100 chrVII:397865-400168 1.0000 100 chrXIV:88881-90251 1.0000 100 chrXIII:653544-654156 1.0000 100 chrXII:818498-819757 1.0000 100 chrXV:639094-639487 1.0000 100 chrXVI:718327-719661 1.0000 100 chrIII:142118-143005 1.0000 100 chrXII:727902-728125 1.0000 100 chrXIV:631551-632134 1.0000 100 chrVII:323456-324880 1.0000 100 chrX:542773-542873 1.0000 100 chrV:434388-435157 1.0000 100 chrV:53526-53980 1.0000 100 chrXV:866550-868323 1.0000 100 chrVIII:103554-105564 1.0000 100 chrXV:520321-520902 1.0000 100 chrXI:490713-491378 1.0000 100 chrVII:440248-441025 1.0000 100 chrXV:391023-391975 1.0000 100 chrXIII:219239-221149 1.0000 100 chrX:523850-523950 1.0000 100 chrXV:504978-505498 1.0000 100 chrIV:946140-946640 1.0000 100 chrVII:876965-877152 1.0000 100 chrXIII:378893-379631 1.0000 100 chrIV:644873-645379 1.0000 100 chrXVI:338583-339433 1.0000 100 chrIV:1201473-1202130 1.0000 100 chrXVI:209986-210737 1.0000 100 chrVII:483224-483812 1.0000 100 chrIV:550876-551471 1.0000 100 chrIII:162113-164257 1.0000 100 chrX:607895-607995 1.0000 100 chrVI:95417-95949 1.0000 100 chrVIII:48135-48674 1.0000 100 chrXII:97397-97878 1.0000 100 chrIV:568580-569355 1.0000 100 chrIX:98118-100057 1.0000 100 chrXII:426915-427473 1.0000 100 chrXIII:388277-388668 1.0000 100 chrVII:771868-772296 1.0000 100 chrXV:274459-274997 1.0000 100 chrXII:214645-215064 1.0000 100 chrIV:1354442-1356089 1.0000 100 chrXIII:586383-586891 1.0000 100 chrVII:706281-707187 1.0000 100 chrXII:875095-875643 1.0000 100 chrIII:13968-17347 1.0000 100 chrXI:513105-513626 1.0000 100 chrVII:364910-366716 1.0000 100 chrIX:299972-300507 1.0000 100 chrII:159824-160044 1.0000 100 chrXVI:810577-811128 1.0000 100 chrXII:605131-605993 1.0000 100 chrIII:176788-178838 1.0000 100 chrX:617702-617802 1.0000 100 chrIV:1434396-1434917 1.0000 100 chrV:99901-100436 1.0000 100 chrVIII:455028-456438 1.0000 100 chrXIV:568051-568629 1.0000 100 chrVII:730937-731458 1.0000 100 chrXV:881905-882453 1.0000 100 chrVII:661516-661953 1.0000 100 chrX:195015-195115 1.0000 100 chrXV:353884-354305 1.0000 100 chrV:117476-118320 1.0000 100 chrX:378228-378328 1.0000 100 chrI:71781-73683 1.0000 100 chrVI:222913-225941 1.0000 100 chrIX:183278-183726 1.0000 100 chrXV:571702-572235 1.0000 100 chrXII:903402-903719 1.0000 100 chrXII:373696-374717 1.0000 100 chrXII:567553-568865 1.0000 100 chrXIV:518823-519131 1.0000 100 chrXII:780493-781882 1.0000 100 chrXIV:725872-726337 1.0000 100 chrX:531542-531642 1.0000 100 chrVII:986618-987642 1.0000 100 chrXV:925155-925432 1.0000 100 chrVII:426648-427433 1.0000 100 chrXIII:807789-808557 1.0000 100 chrIV:721768-722146 1.0000 100 chrXI:578751-579354 1.0000 100 chrXIV:330780-331092 1.0000 100 chrXII:636478-640223 1.0000 100 chrXIV:198241-198504 1.0000 100 chrVIII:119655-122700 1.0000 100 chrVII:779394-779952 1.0000 100 chrXI:46546-47024 1.0000 100 chrIV:125328-125696 1.0000 100 chrIV:599005-601496 1.0000 100 chrVII:1000274-1000627 1.0000 100 chrXIV:416435-418121 1.0000 100 chrII:405568-406356 1.0000 100 chrVII:370392-371572 1.0000 100 chrII:167546-169708 1.0000 100 chrVIII:214164-214348 1.0000 100 chrXVI:866490-866712 1.0000 100 chrVII:959287-960006 1.0000 100 chrVIII:47770-47953 1.0000 100 chrXV:487431-487735 1.0000 100 chrXV:901427-901801 1.0000 100 chrXII:687636-687911 1.0000 100 chrV:321208-323318 1.0000 100 chrXV:231909-232482 1.0000 100 chrXIV:87341-87857 1.0000 100 chrIV:1449765-1451514 1.0000 100 chrIV:340184-341955 1.0000 100 chrII:473852-474362 1.0000 100 chrIV:116399-117914 1.0000 100 chrXI:202172-203310 1.0000 100 chrVII:648768-649393 1.0000 100 chrI:141527-143638 1.0000 100 chrXV:671008-671552 1.0000 100 chrIV:1362077-1362639 1.0000 100 chrVII:738885-739600 1.0000 100 chrXV:113474-113882 1.0000 100 chrXII:784116-784712 1.0000 100 chrVII:702844-704579 1.0000 100 chrIV:1401246-1403451 1.0000 100 chrIV:488416-489176 1.0000 100 chrVII:938992-939754 1.0000 100 chrXVI:39972-41071 1.0000 100 chrXIV:619693-620118 1.0000 100 chrVII:310461-312444 1.0000 100 chrVII:774114-774721 1.0000 100 chrXIII:660936-662523 1.0000 100 chrXV:161016-161928 1.0000 100 chrXVI:502526-503286 1.0000 100 chrXIII:480376-480828 1.0000 100 chrXII:656830-657209 1.0000 100 chrXIV:442807-444842 1.0000 100 chrVIII:62542-62924 1.0000 100 chrXIV:602108-602583 1.0000 100 chrXII:83918-84421 1.0000 100 chrXIII:296671-298918 1.0000 100 chrV:225434-225728 1.0000 100 chrXIII:751303-752032 1.0000 100 chrXVI:744084-744596 1.0000 100 chrXII:837599-839408 1.0000 100 chrIV:1300060-1301327 1.0000 100 chrXIII:116958-119902 1.0000 100 chrV:138431-141936 1.0000 100 chrVII:700206-701298 1.0000 100 chrX:157439-157539 1.0000 100 chrXII:1017674-1019426 1.0000 100 chrX:122780-122880 1.0000 100 chrXVI:640909-641789 1.0000 100 chrII:59492-61334 1.0000 100 chrXII:498280-499741 1.0000 100 chrXIII:131543-132109 1.0000 100 chrII:415507-416124 1.0000 100 chrXVI:302627-304645 1.0000 100 chrII:477038-477766 1.0000 100 chrXIII:768166-768449 1.0000 100 chrVII:561275-561721 1.0000 100 chrXVI:559937-560293 1.0000 100 chrII:44946-45366 1.0000 100 chrX:415709-415809 1.0000 100 chrXVI:689346-689872 1.0000 100 chrV:490748-491948 1.0000 100 chrXV:853983-854865 1.0000 100 chrXIV:493659-495750 1.0000 100 chrVIII:134084-135057 1.0000 100 chrII:181315-181638 1.0000 100 chrIV:980732-981217 1.0000 100 chrIV:321614-321950 1.0000 100 chrII:504522-504742 1.0000 100 chrXI:67681-69046 1.0000 100 chrXV:663468-664101 1.0000 100 chrV:441790-442655 1.0000 100 chrXI:558662-559488 1.0000 100 chrXVI:435540-436198 1.0000 100 chrVII:122057-122877 1.0000 100 chrXI:257782-260115 1.0000 100 chrXI:333691-335014 1.0000 100 chrVIII:296628-297285 1.0000 100 chrVIII:145780-146491 1.0000 100 chrXIV:783518-784325 1.0000 100 chrXI:517156-518305 1.0000 100 chrII:444660-445297 1.0000 100 chrIV:1079939-1081043 1.0000 100 chrX:538016-538116 1.0000 100 chrXVI:188438-188963 1.0000 100 chrXII:201658-202824 1.0000 100 chrVIII:16556-18324 1.0000 100 chrVII:609282-611482 1.0000 100 chrXIV:301466-302300 1.0000 100 chrX:414759-414859 1.0000 100 chrXI:364351-365289 1.0000 100 chrIV:9-344 1.0000 100 chrIII:29533-31178 1.0000 100 chrII:332279-333016 1.0000 100 chrX:354017-354117 1.0000 100 chrXV:446772-447343 1.0000 100 chrVIII:125899-126317 1.0000 100 chrV:363642-364505 1.0000 100 chrX:73384-73484 1.0000 100 chrXVI:242406-243360 1.0000 100 chrII:644936-645452 1.0000 100 chrII:555760-558148 1.0000 100 chrVII:597846-601458 1.0000 100 chrXV:836400-837067 1.0000 100 chrXII:459626-460683 1.0000 100 chrXIV:96012-96529 1.0000 100 chrVIII:34378-36275 1.0000 100 chrV:438494-438993 1.0000 100 chrXII:1051904-1052222 1.0000 100 chrXI:83962-84470 1.0000 100 chrXIII:352879-353155 1.0000 100 chrIV:1256785-1257290 1.0000 100 chrXIII:572666-573192 1.0000 100 chrVII:856675-857648 1.0000 100 chrVII:411832-412586 1.0000 100 chrXVI:731624-732302 1.0000 100 chrXII:975775-976190 1.0000 100 chrIV:437553-438106 1.0000 100 chrX:204543-204643 1.0000 100 chrIV:1150680-1151206 1.0000 100 chrXV:312333-313338 1.0000 100 chrV:60979-62158 1.0000 100 chrIV:1488395-1490803 1.0000 100 chrV:551019-551577 1.0000 100 chrIV:416394-417259 1.0000 100 chrIX:427244-427791 1.0000 100 chrXVI:856720-857425 1.0000 100 chrIX:197310-197795 1.0000 100 chrXIV:61537-64556 1.0000 100 chrIV:490545-491264 1.0000 100 chrXV:977065-981352 1.0000 100 chrXI:463042-463897 1.0000 100 chrXIV:498951-500865 1.0000 100 chrXIII:549895-553445 1.0000 100 chrXI:355289-356620 1.0000 100 chrXIII:504912-505255 1.0000 100 chrV:354687-355389 1.0000 100 chrIV:667703-668214 1.0000 100 chrXII:404066-404740 1.0000 100 chrXIV:569618-570160 1.0000 100 chrXV:339560-340780 1.0000 100 chrXV:770026-770573 1.0000 100 chrIV:835706-836383 1.0000 100 chrX:424277-424377 1.0000 100 chrVI:30279-32410 1.0000 100 chrIX:174875-175374 1.0000 100 chrXIII:290456-291199 1.0000 100 chrIII:127572-127902 1.0000 100 chrX:651194-651294 1.0000 100 chrIX:257357-258656 1.0000 100 chrXIV:560249-560867 1.0000 100 chrIV:1095137-1095673 1.0000 100 chrX:348792-348892 1.0000 100 chrV:85037-86955 1.0000 100 chrX:115559-115659 1.0000 100 chrXIV:418276-418497 1.0000 100 chrX:391793-391893 1.0000 100 chrXV:514329-514742 1.0000 100 chrVII:845363-845961 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/AWRI1631--SWI1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/AWRI1631--SWI1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/AWRI1631--SWI1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.298 C 0.202 G 0.202 T 0.298 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/AWRI1631--SWI1/background): A 0.308 C 0.192 G 0.192 T 0.308 ******************************************************************************** ******************************************************************************** MOTIF GRTCVBSGGTTCGAWYCCSVB MEME-1 width = 21 sites = 102 llr = 1656 E-value = 7.3e-314 ******************************************************************************** -------------------------------------------------------------------------------- Motif GRTCVBSGGTTCGAWYCCSVB MEME-1 Description -------------------------------------------------------------------------------- Simplified A 142:3:12::::2a2::::2: pos.-specific C 2118453::::a::25a7532 probability G 651:3357a:::8:2:::354 matrix T ::62:2:::aa:::45:21:3 bits 2.4 * * * 2.1 * * * 1.9 * * * 1.7 * ** * * Relative 1.4 * ****** * Entropy 1.2 * ****** * (23.4 bits) 1.0 * * ******* **** 0.7 ** * ******** ***** 0.5 ** *********** ****** 0.2 ************** ****** 0.0 --------------------- Multilevel GGTCCCGGGTTCGATTCCCGG consensus CA GGCA AC TGCT sequence AT AC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTCVBSGGTTCGAWYCCSVB MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXIV:631551-632134 - 62 1.12e-13 GGGTGCGGGA GGTCCCGGGTTCGAGTCCCGG CTCGCCCCCA chrIII:123341-123813 - 58 1.12e-13 GGGTGCGGGA GGTCCCGGGTTCGAGTCCCGG CTCGCCCCAC chrIV:1256785-1257290 - 29 1.35e-12 CCCAAGCATG GGGCCCGGGTTCGATTCCCGG CTTCCGCATT chrVII:845363-845961 + 79 6.07e-11 GCCATCGTTG GGCCCCCGGTTCGATTCCGGG C chrX:531542-531642 + 11 6.07e-11 GCCATCGTTG GGCCCCCGGTTCGATTCCGGG CTTGCGCAGT chrIV:83434-83828 + 9 6.07e-11 CATCGTTG GGCCCCCGGTTCGATTCCGGG CTTGCGCAAG chrXIII:183787-183972 - 77 6.07e-11 TTG GGCCCCCGGTTCGATTCCGGG CTTGCGCATA chrXV:226442-226889 - 4 6.07e-11 GCCATCGTTG GGCCCCCGGTTCGATTCCGGG CTT chrXV:281942-282545 + 13 6.07e-11 GCCATCGTTG GGCCCCCGGTTCGATTCCGGG CTTGCGCATT chrVIII:475476-475908 - 72 8.87e-11 ACGGCAAA GGTCCCGAGTTCGATCCTCGG TTGGAACATT chrIV:1075155-1075748 - 79 8.87e-11 A GGTCCCGAGTTCGATCCTCGG TTGGAACATT chrXIV:569618-570160 - 36 7.60e-10 ATAACGCGGG GATCAGCGGTTCGATCCCGCT AGAGACCATT chrV:551019-551577 - 45 7.60e-10 ATAACGCGGG GATCAGCGGTTCGATCCCGCT AGAGACCATT chrXII:1051904-1052222 - 66 7.60e-10 ATAACGCGGG GATCAGCGGTTCGATCCCGCT AGAGACCATT chrXIV:602108-602583 + 62 7.60e-10 ATAACGCGGG GATCAGCGGTTCGATCCCGCT AGAGACCATT chrIV:488416-489176 - 59 7.60e-10 ACACGGCGAA GATCCCGAGTTCGAACCTCGG TTGGATCAGA chrV:442998-443382 - 70 7.60e-10 ATAACGCGGG GATCAGCGGTTCGATCCCGCT AGAGACCATA chrII:326557-327139 - 2 7.60e-10 ACACGGCGAA GATCCCGAGTTCGAACCTCGG T chrXVI:880067-880570 - 36 7.60e-10 ATAACGCGGG GATCAGCGGTTCGATCCCGCT AGAGACCATT chrII:197247-197837 + 47 7.60e-10 ATAACGCGGG GATCAGCGGTTCGATCCCGCT AGAGACCATT chrX:414759-414859 + 41 1.02e-09 TTAATCATAA GGTTAGGGGTTCGAGCCCCCT ACAGGGCTAA chrXIII:480376-480828 - 77 1.02e-09 TAA GGTTAGGGGTTCGAGCCCCCT ACAGGGCTTC chrIX:299972-300507 - 47 1.02e-09 TTAATCATAA GGTTAGGGGTTCGAGCCCCCT ACAGGGCTAT chrIV:1201473-1202130 + 43 1.02e-09 TTAATCATAA GGTTAGGGGTTCGAGCCCCCT ACAGGGCTAA chrVII:876170-876761 + 23 1.02e-09 TTAATCATAA GGTTAGGGGTTCGAGCCCCCT ACAGGGCTTT chrIII:151014-151607 - 32 1.02e-09 TTAATCATAA GGTTAGGGGTTCGAGCCCCCT ACAGGGCTTT chrXIV:96012-96529 - 29 1.35e-09 TCCAAGGTGG GGACACGGGTTCGATTCTCGT ACCGCTCAAA chrVII:779394-779952 + 36 1.35e-09 TCCAAGGTGG GGACACGGGTTCGATTCTCGT ACCGCTCAAG chrII:350595-351138 + 54 1.35e-09 TTGATCCGGA CAACCCCGGTTCGAATCCGGG TAAGACCTTA chrV:130783-131397 - 50 1.35e-09 TTGATCCGAA CAACCCCGGTTCGAATCCGGG TAAGACCTAT chrIII:168091-168542 - 43 1.35e-09 TTGATCCGGA CAACCCCGGTTCGAATCCGGG TAGGACCTTT chrIV:802541-803008 - 15 1.35e-09 TTGATCCGGA CAACCCCGGTTCGAATCCGGG TAGGACCTCT chrXIII:290456-291199 + 67 1.55e-09 TTCACCGTGG AGACCGGGGTTCGACTCCCCG TATCGGAGTC chrII:644936-645452 + 66 1.55e-09 TTCACCGTGG AGACCGGGGTTCGACTCCCCG TATCGGAGTT chrVII:541709-542166 + 6 1.55e-09 CGTGG AGACCGGGGTTCGACTCCCCG TATCGGAGTG chrIX:370220-370696 + 52 1.55e-09 TTCACCGTGG AGACCGGGGTTCGACTCCCCG TATCGGAGTA chrIV:1016950-1017542 - 19 1.55e-09 CTCACCGTGG AGACCGGGGTTCGACTCCCCG CTTCGGAGTT chrV:438494-438993 + 52 1.78e-09 ACACGCAGAA CGTCCCCAGTTCGATCCTGGG CGAAATCAAT chrX:378228-378328 + 65 1.78e-09 ACACGCAGAA CGTCCCCAGTTCGATCCTGGG CGAAATCAAT chrXIII:586383-586891 - 57 1.78e-09 ACACGCAGAA CGTCCCCAGTTCGATCCTGGG CGAAATCATT chrXI:307876-308420 - 54 1.78e-09 ACACGCAGAA CGTCCCCAGTTCGATCCTGGG CGAAATCAAT chrVII:823342-823717 + 48 1.78e-09 ACACGCAGAA CGTCCCCAGTTCGATCCTGGG CGAAATCATT chrXI:578751-579354 + 30 5.65e-09 GATACCGAAA TGTCAGGGGTTCGAGCCCCCT ATGAGGAGTT chrXVI:768943-769499 - 44 5.65e-09 GATACCGAAA TGTCAGGGGTTCGAGCCCCCT ATGAGGAGTT chrXV:300913-301501 + 13 5.65e-09 GCATGCGAGA GGCCCTGGGTTCAATTCCCAG CTCGCCCCCT chrXI:46546-47024 - 8 6.36e-09 GTAATGCGGG GATCGTGGGTTCAATTCCCAC AGAGGGC chrVII:700206-701298 + 26 8.05e-09 ATCTCTTCGG AGGCGCGGGTTCAAACCCCGC GGGTATCAAT chrX:233693-233793 + 51 1.13e-08 CGAACCAGGA GATTCCAGGTTCGAGTCCTGG CGGGGAAGAA chrXIII:131543-132109 - 57 1.58e-08 CTAATCAGAA GATTATGGGTTCGACCCCCAT CGTGAGTGCT chrVII:774114-774721 + 26 1.58e-08 GCATGGGAGA GGTCTCCGGTTCGATTCCGGA CTCGTCCAAA chrII:405568-406356 + 9 1.58e-08 AATCAGAA GATTATGGGTTCGACCCCCAT CGTGAGTGCT chrIV:568580-569355 + 8 1.58e-08 ATCAGAA GATTATGGGTTCGACCCCCAT CGTGAGTGCT chrXI:219716-220141 + 61 1.58e-08 GCATGGGAGA GGTCTCCGGTTCGATTCCGGA CTCGTCCAAT chrXIII:320950-321334 - 63 1.58e-08 GCATGGGAGA GGTCTCCGGTTCGATTCCGGA CTCGTCCATT chrXIII:747697-748143 - 30 1.58e-08 CTAATCAGAA GATTATGGGTTCGACCCCCAT CGTGAGTGTT chrVII:828414-828991 - 79 1.58e-08 A GATTATGGGTTCGACCCCCAT CGTGAGTGCT chrXIII:572666-573192 - 12 4.82e-08 ATAATCTGAA GGTCGAGAGTTCGAACCTCCC CTGGAGCACA chrII:9366-9890 + 60 4.82e-08 GGACGGTTGT CCGCGCGAGTTCGAACCTCGC ATCCTTCAGT chrX:390774-390874 - 60 4.82e-08 ATAATCTGAA GGTCGAGAGTTCGAACCTCCC CTGGAGCATA chrXII:962765-963293 - 1 4.82e-08 GGACGGTTGT CCGCGCGAGTTCGAACCTCGC chrII:347402-347936 + 39 4.82e-08 GGACGGTTGT CCGCGCGAGTTCGAACCTCGC ATCCTTCAGT chrIV:1175584-1176110 + 76 4.82e-08 ATAATCTGAA GGTCGAGAGTTCGAACCTCCC CTGG chrX:204543-204643 + 34 5.30e-08 GTCGCGTGCC AGATCGGGGTTCAATTCCCCG TCGCGGAGAT chrXI:513105-513626 - 25 5.30e-08 GTCGCGTGCC AGATCGGGGTTCAATTCCCCG TCGCGGAGAT chrXII:426915-427473 + 31 5.30e-08 GTCGCGTGCC AGATCGGGGTTCAATTCCCCG TCGCGGAGAA chrXIII:463345-463925 + 12 5.30e-08 GTCGCGTGCC AGATCGGGGTTCAATTCCCCG TCGCGGAGAT chrIV:1095137-1095673 - 23 5.83e-08 GATATCTGGA GGTCCTGTGTTCGATCCACAG AGTTCGCATT chrXIII:352086-352639 + 30 5.83e-08 GTTATCTGGA GGTCCTGTGTTCGATCCACAG AATTCGCATT chrVIII:358240-358765 - 34 5.83e-08 GTTATCTGGA GGTCCTGTGTTCGATCCACAG AATTCGCATA chrXIV:374669-375199 + 47 5.83e-08 GTCATCTGGA GGTCCTGTGTTCGATCCACAG AGTTCGCAAT chrXVI:622244-622875 - 39 5.83e-08 GTTATCTGGA GGTCCTGTGTTCGATCCACAG AATTCGCATT chrIX:174875-175374 + 1 6.39e-08 . GATCATCGGTTCAAATCCGAT TGGAAGCAAT chrXV:353884-354305 - 5 6.39e-08 GTAATGTGGA GATCATCGGTTCAAATCCGAT TGGA chrXI:490713-491378 + 17 6.39e-08 CGAACCAGAA GATTCCAGGTTCAAGTCCTGG CGGGGAAGAA chrII:266189-266690 + 33 6.39e-08 GTAATGTGGA GATCATCGGTTCAAATCCGAT TGGAAGCATT chrIV:619704-620227 - 62 6.39e-08 CGAACCAGAA GATTCCAGGTTCAAGTCCTGG CGGGGAAGAT chrXIV:104607-105114 + 39 6.39e-08 GTAATGTGGA GATCATCGGTTCAAATCCGAT TGGAAGCATA chrIV:437553-438106 + 46 7.00e-08 TGGGCTTTGC CCGCGCAGGTTCGAGTCCTGC AGTTGTCGTC chrIV:980732-981217 - 58 7.00e-08 TGGGCTTTGC CCGCGCAGGTTCGAGTCCTGC AGTTGTCGTT chrII:226972-227344 + 20 7.00e-08 TGGGCTTTGC CCGCGCAGGTTCGAGTCCTGC AGTTGTCGTT chrIV:1305392-1305928 + 74 7.00e-08 GGGCTTTGGC CCGCGCAGGTTCGAGTCCTGC AGTTGT chrXIII:258998-259383 - 26 7.00e-08 TGGGCTTTGC CCGCGCAGGTTCGAGTCCTGC AGTTGTCGTT chrXII:167749-168242 - 7 7.00e-08 TGGGCTTTGC CCGCGCAGGTTCGAGTCCTGC AGTTGT chrX:415709-415809 - 15 7.67e-08 GCAATCGAAG GGTTGCAGGTTCAATTCCTGT CCGTTTCAAT chrX:354017-354117 + 79 1.00e-07 GAAATCTTGA GATCGGGCGTTCGACTCGCCC C chrIV:946140-946640 + 32 1.00e-07 GAAATCTTGA GATCGGGCGTTCGACTCGCCC CCGGGAGATT chrVI:167258-167725 + 56 1.00e-07 GAAATCTTGA GATCGGGCGTTCGACTCGCCC CCGGGAGATA chrXIII:837726-838244 + 53 1.00e-07 GAAATCTTGA GATCGGGCGTTCGACTCGCCC CCGGGAGATA chrII:642855-643262 - 7 1.09e-07 CAAATCTGTT GGTCCTTAGTTCGATCCTGAG TGCGAG chrIII:127572-127902 + 74 1.29e-07 TTAATCGCAA GATCGTGAGTTCAACCCTCAC TGGGGT chrXII:975775-976190 - 59 1.29e-07 TTAATCGCAA GATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrVII:730937-731458 + 35 1.29e-07 TTAATCGCAA GATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrXIV:632400-632900 + 44 1.29e-07 TTAATCGCAA GATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrXII:784116-784712 + 61 4.15e-07 TGGGTTTTAC CTGCGCAGGTTCGAATCCTGT CTGTGACGCT chrXV:274459-274997 + 67 4.15e-07 TGGGTTTTAC CTGCGCAGGTTCGAATCCTGT CTGTGACGCA chrVI:191300-191786 - 28 4.15e-07 TGGGTTTTAC CTGCGCAGGTTCGAATCCTGT CTGTGACGCA chrXVI:689346-689872 + 59 9.30e-07 TGGGCTCTGC CCGCGCTGGTTCAAATCCTGC TGGTGTCGTA chrXVI:744084-744596 + 37 9.30e-07 GTAATGCAAA GGTCGTTAGTTCAATTCTGAC AGGTGGCAAA chrXVI:645167-646158 + 22 9.30e-07 GTCCCCGCGC AAATCCGAGATCGATTCCGCG GCGGGTCGGT chrVII:483224-483812 + 18 9.90e-07 ATTATCGCCG GATCTCCGCTTCGAGACCGGG TTTGTTTTCA chrV:99901-100436 + 58 1.89e-06 ATAACCCTGA TGTCCTCGGATCGAAACCGAG CGGCGCTAAT chrX:517644-517744 - 2 1.89e-06 ATAACCCTGA TGTCCTCGGATCGAAACCGAG C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTCVBSGGTTCGAWYCCSVB MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:631551-632134 1.1e-13 61_[-1]_18 chrIII:123341-123813 1.1e-13 57_[-1]_22 chrIV:1256785-1257290 1.4e-12 28_[-1]_51 chrVII:845363-845961 6.1e-11 78_[+1]_1 chrX:531542-531642 6.1e-11 10_[+1]_69 chrIV:83434-83828 6.1e-11 8_[+1]_71 chrXIII:183787-183972 6.1e-11 76_[-1]_3 chrXV:226442-226889 6.1e-11 3_[-1]_76 chrXV:281942-282545 6.1e-11 12_[+1]_67 chrVIII:475476-475908 8.9e-11 71_[-1]_8 chrIV:1075155-1075748 8.9e-11 78_[-1]_1 chrXIV:569618-570160 7.6e-10 35_[-1]_44 chrV:551019-551577 7.6e-10 44_[-1]_35 chrXII:1051904-1052222 7.6e-10 65_[-1]_14 chrXIV:602108-602583 7.6e-10 61_[+1]_18 chrIV:488416-489176 7.6e-10 58_[-1]_21 chrV:442998-443382 7.6e-10 69_[-1]_10 chrII:326557-327139 7.6e-10 1_[-1]_78 chrXVI:880067-880570 7.6e-10 35_[-1]_44 chrII:197247-197837 7.6e-10 46_[+1]_33 chrX:414759-414859 1e-09 40_[+1]_39 chrXIII:480376-480828 1e-09 76_[-1]_3 chrIX:299972-300507 1e-09 46_[-1]_33 chrIV:1201473-1202130 1e-09 42_[+1]_37 chrVII:876170-876761 1e-09 22_[+1]_57 chrIII:151014-151607 1e-09 31_[-1]_48 chrXIV:96012-96529 1.3e-09 28_[-1]_51 chrVII:779394-779952 1.3e-09 35_[+1]_44 chrII:350595-351138 1.3e-09 53_[+1]_26 chrV:130783-131397 1.3e-09 49_[-1]_30 chrIII:168091-168542 1.3e-09 42_[-1]_37 chrIV:802541-803008 1.3e-09 14_[-1]_65 chrXIII:290456-291199 1.6e-09 66_[+1]_13 chrII:644936-645452 1.6e-09 65_[+1]_14 chrVII:541709-542166 1.6e-09 5_[+1]_74 chrIX:370220-370696 1.6e-09 51_[+1]_28 chrIV:1016950-1017542 1.6e-09 18_[-1]_61 chrV:438494-438993 1.8e-09 51_[+1]_28 chrX:378228-378328 1.8e-09 64_[+1]_15 chrXIII:586383-586891 1.8e-09 56_[-1]_23 chrXI:307876-308420 1.8e-09 53_[-1]_26 chrVII:823342-823717 1.8e-09 47_[+1]_32 chrXI:578751-579354 5.6e-09 29_[+1]_50 chrXVI:768943-769499 5.6e-09 43_[-1]_36 chrXV:300913-301501 5.6e-09 12_[+1]_67 chrXI:46546-47024 6.4e-09 7_[-1]_72 chrVII:700206-701298 8.1e-09 25_[+1]_54 chrX:233693-233793 1.1e-08 50_[+1]_29 chrXIII:131543-132109 1.6e-08 56_[-1]_23 chrVII:774114-774721 1.6e-08 25_[+1]_54 chrII:405568-406356 1.6e-08 8_[+1]_71 chrIV:568580-569355 1.6e-08 7_[+1]_72 chrXI:219716-220141 1.6e-08 60_[+1]_19 chrXIII:320950-321334 1.6e-08 62_[-1]_17 chrXIII:747697-748143 1.6e-08 29_[-1]_50 chrVII:828414-828991 1.6e-08 78_[-1]_1 chrXIII:572666-573192 4.8e-08 11_[-1]_68 chrII:9366-9890 4.8e-08 59_[+1]_20 chrX:390774-390874 4.8e-08 59_[-1]_20 chrXII:962765-963293 4.8e-08 [-1]_79 chrII:347402-347936 4.8e-08 38_[+1]_41 chrIV:1175584-1176110 4.8e-08 75_[+1]_4 chrX:204543-204643 5.3e-08 33_[+1]_46 chrXI:513105-513626 5.3e-08 24_[-1]_55 chrXII:426915-427473 5.3e-08 30_[+1]_49 chrXIII:463345-463925 5.3e-08 11_[+1]_68 chrIV:1095137-1095673 5.8e-08 22_[-1]_57 chrXIII:352086-352639 5.8e-08 29_[+1]_50 chrVIII:358240-358765 5.8e-08 33_[-1]_46 chrXIV:374669-375199 5.8e-08 46_[+1]_33 chrXVI:622244-622875 5.8e-08 38_[-1]_41 chrIX:174875-175374 6.4e-08 [+1]_79 chrXV:353884-354305 6.4e-08 4_[-1]_75 chrXI:490713-491378 6.4e-08 16_[+1]_63 chrII:266189-266690 6.4e-08 32_[+1]_47 chrIV:619704-620227 6.4e-08 61_[-1]_18 chrXIV:104607-105114 6.4e-08 38_[+1]_41 chrIV:437553-438106 7e-08 45_[+1]_34 chrIV:980732-981217 7e-08 57_[-1]_22 chrII:226972-227344 7e-08 19_[+1]_60 chrIV:1305392-1305928 7e-08 73_[+1]_6 chrXIII:258998-259383 7e-08 25_[-1]_54 chrXII:167749-168242 7e-08 6_[-1]_73 chrX:415709-415809 7.7e-08 14_[-1]_65 chrX:354017-354117 1e-07 78_[+1]_1 chrIV:946140-946640 1e-07 31_[+1]_48 chrVI:167258-167725 1e-07 55_[+1]_24 chrXIII:837726-838244 1e-07 52_[+1]_27 chrII:642855-643262 1.1e-07 6_[-1]_73 chrIII:127572-127902 1.3e-07 73_[+1]_6 chrXII:975775-976190 1.3e-07 58_[-1]_21 chrVII:730937-731458 1.3e-07 34_[+1]_45 chrXIV:632400-632900 1.3e-07 43_[+1]_36 chrXII:784116-784712 4.2e-07 60_[+1]_19 chrXV:274459-274997 4.2e-07 66_[+1]_13 chrVI:191300-191786 4.2e-07 27_[-1]_52 chrXVI:689346-689872 9.3e-07 58_[+1]_21 chrXVI:744084-744596 9.3e-07 36_[+1]_43 chrXVI:645167-646158 9.3e-07 21_[+1]_58 chrVII:483224-483812 9.9e-07 17_[+1]_62 chrV:99901-100436 1.9e-06 57_[+1]_22 chrX:517644-517744 1.9e-06 1_[-1]_78 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTCVBSGGTTCGAWYCCSVB MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GRTCVBSGGTTCGAWYCCSVB width=21 seqs=102 chrXIV:631551-632134 ( 62) GGTCCCGGGTTCGAGTCCCGG 1 chrIII:123341-123813 ( 58) GGTCCCGGGTTCGAGTCCCGG 1 chrIV:1256785-1257290 ( 29) GGGCCCGGGTTCGATTCCCGG 1 chrVII:845363-845961 ( 79) GGCCCCCGGTTCGATTCCGGG 1 chrX:531542-531642 ( 11) GGCCCCCGGTTCGATTCCGGG 1 chrIV:83434-83828 ( 9) GGCCCCCGGTTCGATTCCGGG 1 chrXIII:183787-183972 ( 77) GGCCCCCGGTTCGATTCCGGG 1 chrXV:226442-226889 ( 4) GGCCCCCGGTTCGATTCCGGG 1 chrXV:281942-282545 ( 13) GGCCCCCGGTTCGATTCCGGG 1 chrVIII:475476-475908 ( 72) GGTCCCGAGTTCGATCCTCGG 1 chrIV:1075155-1075748 ( 79) GGTCCCGAGTTCGATCCTCGG 1 chrXIV:569618-570160 ( 36) GATCAGCGGTTCGATCCCGCT 1 chrV:551019-551577 ( 45) GATCAGCGGTTCGATCCCGCT 1 chrXII:1051904-1052222 ( 66) GATCAGCGGTTCGATCCCGCT 1 chrXIV:602108-602583 ( 62) GATCAGCGGTTCGATCCCGCT 1 chrIV:488416-489176 ( 59) GATCCCGAGTTCGAACCTCGG 1 chrV:442998-443382 ( 70) GATCAGCGGTTCGATCCCGCT 1 chrII:326557-327139 ( 2) GATCCCGAGTTCGAACCTCGG 1 chrXVI:880067-880570 ( 36) GATCAGCGGTTCGATCCCGCT 1 chrII:197247-197837 ( 47) GATCAGCGGTTCGATCCCGCT 1 chrX:414759-414859 ( 41) GGTTAGGGGTTCGAGCCCCCT 1 chrXIII:480376-480828 ( 77) GGTTAGGGGTTCGAGCCCCCT 1 chrIX:299972-300507 ( 47) GGTTAGGGGTTCGAGCCCCCT 1 chrIV:1201473-1202130 ( 43) GGTTAGGGGTTCGAGCCCCCT 1 chrVII:876170-876761 ( 23) GGTTAGGGGTTCGAGCCCCCT 1 chrIII:151014-151607 ( 32) GGTTAGGGGTTCGAGCCCCCT 1 chrXIV:96012-96529 ( 29) GGACACGGGTTCGATTCTCGT 1 chrVII:779394-779952 ( 36) GGACACGGGTTCGATTCTCGT 1 chrII:350595-351138 ( 54) CAACCCCGGTTCGAATCCGGG 1 chrV:130783-131397 ( 50) CAACCCCGGTTCGAATCCGGG 1 chrIII:168091-168542 ( 43) CAACCCCGGTTCGAATCCGGG 1 chrIV:802541-803008 ( 15) CAACCCCGGTTCGAATCCGGG 1 chrXIII:290456-291199 ( 67) AGACCGGGGTTCGACTCCCCG 1 chrII:644936-645452 ( 66) AGACCGGGGTTCGACTCCCCG 1 chrVII:541709-542166 ( 6) AGACCGGGGTTCGACTCCCCG 1 chrIX:370220-370696 ( 52) AGACCGGGGTTCGACTCCCCG 1 chrIV:1016950-1017542 ( 19) AGACCGGGGTTCGACTCCCCG 1 chrV:438494-438993 ( 52) CGTCCCCAGTTCGATCCTGGG 1 chrX:378228-378328 ( 65) CGTCCCCAGTTCGATCCTGGG 1 chrXIII:586383-586891 ( 57) CGTCCCCAGTTCGATCCTGGG 1 chrXI:307876-308420 ( 54) CGTCCCCAGTTCGATCCTGGG 1 chrVII:823342-823717 ( 48) CGTCCCCAGTTCGATCCTGGG 1 chrXI:578751-579354 ( 30) TGTCAGGGGTTCGAGCCCCCT 1 chrXVI:768943-769499 ( 44) TGTCAGGGGTTCGAGCCCCCT 1 chrXV:300913-301501 ( 13) GGCCCTGGGTTCAATTCCCAG 1 chrXI:46546-47024 ( 8) GATCGTGGGTTCAATTCCCAC 1 chrVII:700206-701298 ( 26) AGGCGCGGGTTCAAACCCCGC 1 chrX:233693-233793 ( 51) GATTCCAGGTTCGAGTCCTGG 1 chrXIII:131543-132109 ( 57) GATTATGGGTTCGACCCCCAT 1 chrVII:774114-774721 ( 26) GGTCTCCGGTTCGATTCCGGA 1 chrII:405568-406356 ( 9) GATTATGGGTTCGACCCCCAT 1 chrIV:568580-569355 ( 8) GATTATGGGTTCGACCCCCAT 1 chrXI:219716-220141 ( 61) GGTCTCCGGTTCGATTCCGGA 1 chrXIII:320950-321334 ( 63) GGTCTCCGGTTCGATTCCGGA 1 chrXIII:747697-748143 ( 30) GATTATGGGTTCGACCCCCAT 1 chrVII:828414-828991 ( 79) GATTATGGGTTCGACCCCCAT 1 chrXIII:572666-573192 ( 12) GGTCGAGAGTTCGAACCTCCC 1 chrII:9366-9890 ( 60) CCGCGCGAGTTCGAACCTCGC 1 chrX:390774-390874 ( 60) GGTCGAGAGTTCGAACCTCCC 1 chrXII:962765-963293 ( 1) CCGCGCGAGTTCGAACCTCGC 1 chrII:347402-347936 ( 39) CCGCGCGAGTTCGAACCTCGC 1 chrIV:1175584-1176110 ( 76) GGTCGAGAGTTCGAACCTCCC 1 chrX:204543-204643 ( 34) AGATCGGGGTTCAATTCCCCG 1 chrXI:513105-513626 ( 25) AGATCGGGGTTCAATTCCCCG 1 chrXII:426915-427473 ( 31) AGATCGGGGTTCAATTCCCCG 1 chrXIII:463345-463925 ( 12) AGATCGGGGTTCAATTCCCCG 1 chrIV:1095137-1095673 ( 23) GGTCCTGTGTTCGATCCACAG 1 chrXIII:352086-352639 ( 30) GGTCCTGTGTTCGATCCACAG 1 chrVIII:358240-358765 ( 34) GGTCCTGTGTTCGATCCACAG 1 chrXIV:374669-375199 ( 47) GGTCCTGTGTTCGATCCACAG 1 chrXVI:622244-622875 ( 39) GGTCCTGTGTTCGATCCACAG 1 chrIX:174875-175374 ( 1) GATCATCGGTTCAAATCCGAT 1 chrXV:353884-354305 ( 5) GATCATCGGTTCAAATCCGAT 1 chrXI:490713-491378 ( 17) GATTCCAGGTTCAAGTCCTGG 1 chrII:266189-266690 ( 33) GATCATCGGTTCAAATCCGAT 1 chrIV:619704-620227 ( 62) GATTCCAGGTTCAAGTCCTGG 1 chrXIV:104607-105114 ( 39) GATCATCGGTTCAAATCCGAT 1 chrIV:437553-438106 ( 46) CCGCGCAGGTTCGAGTCCTGC 1 chrIV:980732-981217 ( 58) CCGCGCAGGTTCGAGTCCTGC 1 chrII:226972-227344 ( 20) CCGCGCAGGTTCGAGTCCTGC 1 chrIV:1305392-1305928 ( 74) CCGCGCAGGTTCGAGTCCTGC 1 chrXIII:258998-259383 ( 26) CCGCGCAGGTTCGAGTCCTGC 1 chrXII:167749-168242 ( 7) CCGCGCAGGTTCGAGTCCTGC 1 chrX:415709-415809 ( 15) GGTTGCAGGTTCAATTCCTGT 1 chrX:354017-354117 ( 79) GATCGGGCGTTCGACTCGCCC 1 chrIV:946140-946640 ( 32) GATCGGGCGTTCGACTCGCCC 1 chrVI:167258-167725 ( 56) GATCGGGCGTTCGACTCGCCC 1 chrXIII:837726-838244 ( 53) GATCGGGCGTTCGACTCGCCC 1 chrII:642855-643262 ( 7) GGTCCTTAGTTCGATCCTGAG 1 chrIII:127572-127902 ( 74) GATCGTGAGTTCAACCCTCAC 1 chrXII:975775-976190 ( 59) GATCGTGAGTTCAACCCTCAC 1 chrVII:730937-731458 ( 35) GATCGTGAGTTCAACCCTCAC 1 chrXIV:632400-632900 ( 44) GATCGTGAGTTCAACCCTCAC 1 chrXII:784116-784712 ( 61) CTGCGCAGGTTCGAATCCTGT 1 chrXV:274459-274997 ( 67) CTGCGCAGGTTCGAATCCTGT 1 chrVI:191300-191786 ( 28) CTGCGCAGGTTCGAATCCTGT 1 chrXVI:689346-689872 ( 59) CCGCGCTGGTTCAAATCCTGC 1 chrXVI:744084-744596 ( 37) GGTCGTTAGTTCAATTCTGAC 1 chrXVI:645167-646158 ( 22) AAATCCGAGATCGATTCCGCG 1 chrVII:483224-483812 ( 18) GATCTCCGCTTCGAGACCGGG 1 chrV:99901-100436 ( 58) TGTCCTCGGATCGAAACCGAG 1 chrX:517644-517744 ( 2) TGTCCTCGGATCGAAACCGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTCVBSGGTTCGAWYCCSVB MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 48000 bayes= 10.0258 E= 7.3e-314 -152 17 173 -297 20 -97 144 -339 -97 -148 -38 103 -1332 207 -1332 -65 -27 117 52 -297 -339 127 52 -39 -127 71 147 -339 -52 -229 186 -265 -1332 -429 237 -1332 -339 -1332 -1332 165 -1332 -1332 -1332 170 -1332 238 -1332 -1332 -65 -1332 207 -1332 170 -1332 -1332 -1332 -45 -12 3 38 -339 123 -1332 75 -1332 238 -1332 -1332 -265 184 -229 -45 -1332 144 84 -117 -39 71 123 -1332 -339 30 120 -7 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTCVBSGGTTCGAWYCCSVB MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 102 E= 7.3e-314 0.107843 0.215686 0.637255 0.039216 0.352941 0.098039 0.519608 0.029412 0.156863 0.068627 0.147059 0.627451 0.000000 0.803922 0.000000 0.196078 0.254902 0.431373 0.274510 0.039216 0.029412 0.460784 0.274510 0.235294 0.127451 0.313725 0.529412 0.029412 0.215686 0.039216 0.696078 0.049020 0.000000 0.009804 0.990196 0.000000 0.029412 0.000000 0.000000 0.970588 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.196078 0.000000 0.803922 0.000000 1.000000 0.000000 0.000000 0.000000 0.225490 0.176471 0.196078 0.401961 0.029412 0.450980 0.000000 0.519608 0.000000 1.000000 0.000000 0.000000 0.049020 0.686275 0.039216 0.225490 0.000000 0.519608 0.343137 0.137255 0.235294 0.313725 0.450980 0.000000 0.029412 0.235294 0.441176 0.294118 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTCVBSGGTTCGAWYCCSVB MEME-1 regular expression -------------------------------------------------------------------------------- [GC][GA]TC[CGA][CGT][GC][GA]GTTCGA[TA][TC]C[CT][CG][GCA][GTC] -------------------------------------------------------------------------------- Time 353.61 secs. ******************************************************************************** ******************************************************************************** MOTIF SNNSSCYTWWMCCACTVGGCCAMVVRRSC MEME-2 width = 29 sites = 48 llr = 831 E-value = 1.0e-116 ******************************************************************************** -------------------------------------------------------------------------------- Motif SNNSSCYTWWMCCACTVGGCCAMVVRRSC MEME-2 Description -------------------------------------------------------------------------------- Simplified A :331111:455:2a::323::a42343:1 pos.-specific C 322456332:4a6:9:22:a8:4232259 probability G 53254211:1::2:::367::::43443: matrix T 223:1:56441:::1a1:::2:221111: bits 2.4 * * 2.1 * * 1.9 * * * 1.7 * ** *** * Relative 1.4 * *** **** * Entropy 1.2 * *** **** * (25.0 bits) 1.0 * * * *** **** * 0.7 * * * ***** ***** ** 0.5 * *** * ****** ****** ** 0.2 * ************************** 0.0 ----------------------------- Multilevel GATGCCTTAAACCACTAGGCCACGGAGCC consensus CGACGGCCTTC A GAA AACGAG sequence C CC CA T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SNNSSCYTWWMCCACTVGGCCAMVVRRSC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrXIV:602108-602583 - 17 4.78e-13 TTATTAGCAC GGTGCCTTAACCAACTGGGCCAAGAGACC ATTGTTATCT chrIX:183278-183726 + 33 4.78e-13 TTATTAGCAC GGTGCCTTAACCAACTGGGCCAAGAGACC AGGAATTTGT chrII:197247-197837 - 2 4.78e-13 TTATTAGCAC GGTGCCTTAACCAACTGGGCCAAGAGACC T chrX:424277-424377 + 40 3.53e-11 TCTTAAGTCT GCCGCCTTAGACCACTCGGCCAACCCTCC ATCTTATTTA chrII:9366-9890 - 5 3.53e-11 TCTTAAGTCT GCCGCCTTAGACCACTCGGCCAACCCTCC ACGA chrXII:962765-963293 + 48 3.53e-11 TCTTAAGTCT GCCGCCTTAGACCACTCGGCCAACCCTCC GTCGATAATA chrXVI:689346-689872 - 6 1.53e-10 ATTTCAAGTC TGTCGCCTTAACCACTCGGCCATAGTGCC CAAAA chrV:438494-438993 - 7 2.01e-10 GTGTTAAGCA GATGCCATAACCGACTAGACCACGAAACC TAATTT chrXII:656830-657209 + 9 2.01e-10 TGCTAAGG GAGCGCGCTACCGACTACGCCACACGCCC AATTTTCTTG chrX:378228-378328 - 20 2.01e-10 GTGTTAAGCA GATGCCATAACCGACTAGACCACGAAACC TATTAATTTA chrXI:219716-220141 - 17 2.01e-10 CATGCTAAGG GAGCGCGCTACCGACTACGCCACACGCCC TATTTACTGT chrVII:823342-823717 - 3 2.01e-10 GTGTTAAGCA GATGCCATAACCGACTAGACCACGAAACC AC chrV:469248-469658 - 54 2.01e-10 GTGTTAAGCA GATGCCATAACCGACTAGACCACGAAACC AATTATTTCT chrIV:1150680-1151206 + 20 2.63e-10 AAATAGCAGG CATCGCCTTAACCACTCGGCCACTGGGAC TGAAACACTT chrIV:1305392-1305928 - 20 3.41e-10 ATTTCTAATC TTTCGCCTTAACCACTCGGCCAAGTTGCC TTAATTTGTA chrXIII:258998-259383 + 71 3.41e-10 ATTTCTAATC TTTCGCCTTAACCACTCGGCCAAGTTGCC A chrXII:167749-168242 + 52 3.41e-10 ATTTCTAATC TTTCGCCTTAACCACTCGGCCAAGTTGCC ATATGACTAT chrIII:127572-127902 - 29 4.40e-10 TTAACAGTCG CACGCCTTAACCAACTTGGCCATGGAGTC ATTTTATCTT chrXV:228063-228594 - 53 4.40e-10 TTAACAGTCG CACGCCTTAACCAACTTGGCCATGGAGTC TAATATTTTA chrXI:74419-74817 - 56 4.40e-10 TTAACAGTCG CACGCCTTAACCAACTTGGCCATGGAGTC TAATTGCTAT chrXI:83962-84470 - 42 6.37e-10 TCTTAAGTCT GCCGCATTAGACCACTCGGCCAACCCTCC ATACAAATTT chrXII:628143-628687 - 18 7.19e-10 TCTTGAATCA GGCGCCTTAGACCGCTCGGCCAAACAACC ACTTATTTGT chrXV:353884-354305 + 41 1.81e-09 ATTACTAGTG TGGCGCCTTACCAACTTGGCCATAGAAGC AGTAAACCGT chrVII:661516-661953 - 65 3.12e-09 TACAAGT GCAACGCTCTACCACTAAGCTAAGGAGGC AAATTTTTAC chrVII:1003993-1004431 - 54 3.12e-09 CATTACAAGT GCAACGCTCTACCACTAAGCTAAGGAGGC AAACCCTTGA chrVIII:466654-467291 - 68 3.12e-09 AAGT GCAACGCTCTACCACTAAGCTAAGGAGGC TAAAAATACA chrXIV:546555-547593 - 70 5.77e-09 AG CGAGAATCATACCACTAGACCACACGCCC GATTATTTCG chrI:138956-139354 - 47 5.77e-09 TCGCCCAAAG CGAGAATCATACCACTAGACCACACGCCC GTACTAATTG chrXII:92337-92833 - 13 5.77e-09 TCGCCCAAAG CGAGAATCATACCACTAGACCACACGCCC TTATTAACTT chrII:326557-327139 + 39 7.03e-09 GTGTAAAGGC GACGTCTTGAACCACTGGACCATTGGACC CGGAACTCGA chrXI:46546-47024 + 43 1.36e-08 CATTACGAGT GCGATGCCTTACCACTTGGCCAAAAGGGC TGAGTAATTT chrV:99901-100436 - 15 1.64e-08 GGTTATGAGC CCTGCGCGCTTCCACTGCGCCACGGCGCT TAGCCAACTT chrX:517644-517744 + 37 1.64e-08 GGTTATGAGC CCTGCGCGCTTCCACTGCGCCACGGCGCT TAACTTTTAT chrVII:845363-845961 - 37 2.54e-08 CGATGGCAAC GTTGGATTTTACCACTAAACCACTTGCGC TTGTTATTTA chrXVI:775607-776071 + 19 2.54e-08 GATTTGCAAT CTGCTGCGCTACCACTGCGCCATACGAGC TTTTGAATTA chrXV:226442-226889 + 38 2.54e-08 CGATGGCAAC GTTGGATTTTACCACTAAACCACTTGCGC TGAATTTCTT chrII:642855-643262 + 42 2.54e-08 GATTTGCAAT CTGCTGCGCTACCACTGCGCCATACGAGC TTTCTATTAC chrXII:875095-875643 - 57 3.88e-08 CTTAAAAGCC GAACGCTCTACCAACTGAGCTAACAAGGA TGAGTTCTTC chrXV:438381-438974 - 16 3.88e-08 CTTAAAAGCC GAACGCTCTACCAACTGAGCTAACAAGGA TGAGTTCTTC chrXIII:572666-573192 + 48 4.21e-08 ATTATGAGAC TGACGCTCTTCCTACTGAGCTACTGAAGC TATCTGTTAT chrIV:1175584-1176110 - 32 4.21e-08 ATTATGAGAC TGACGCTCTTCCTACTGAGCTACTGAAGC TTTGTTTTGT chrV:435611-436021 + 30 9.24e-08 ATTAAGAGTC ATACGCGCTACCGATTGCGCCAACAAGGC TCTTATTGTT chrIII:151014-151607 + 68 9.24e-08 ATTAAGAGTC ATACGCGCTACCGATTGCGCCAACAAGGC TCTT chrXIII:747697-748143 + 65 1.90e-07 GATTAGAAGT CAGACGCGTTGCCATTACGCCACGCGAGC TAGTCAT chrXI:99019-102385 + 21 5.05e-07 CGCTCATCAT GGACGCTTACTCCACAAGACCATTAACCC TATCTCACGG chrXI:302667-303234 - 18 5.05e-07 TAATTGGAGT CGAAAGCTCTACCATTGAGCCACCGCTTC ATCTTGGAAT chrIII:66-1038 + 42 2.02e-06 TACCCTCCAA TTACCCGTATCCAACTCCACTACCGCTTA CCCTACCATC chrXV:274459-274997 - 3 4.12e-06 TCTGAGGAAA TAGCAGGGCATCGCCTTAACCACTCGGCC AC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SNNSSCYTWWMCCACTVGGCCAMVVRRSC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:602108-602583 4.8e-13 16_[-2]_55 chrIX:183278-183726 4.8e-13 32_[+2]_39 chrII:197247-197837 4.8e-13 1_[-2]_70 chrX:424277-424377 3.5e-11 39_[+2]_32 chrII:9366-9890 3.5e-11 4_[-2]_67 chrXII:962765-963293 3.5e-11 47_[+2]_24 chrXVI:689346-689872 1.5e-10 5_[-2]_66 chrV:438494-438993 2e-10 6_[-2]_65 chrXII:656830-657209 2e-10 8_[+2]_63 chrX:378228-378328 2e-10 19_[-2]_52 chrXI:219716-220141 2e-10 16_[-2]_55 chrVII:823342-823717 2e-10 2_[-2]_69 chrV:469248-469658 2e-10 53_[-2]_18 chrIV:1150680-1151206 2.6e-10 19_[+2]_52 chrIV:1305392-1305928 3.4e-10 19_[-2]_52 chrXIII:258998-259383 3.4e-10 70_[+2]_1 chrXII:167749-168242 3.4e-10 51_[+2]_20 chrIII:127572-127902 4.4e-10 28_[-2]_43 chrXV:228063-228594 4.4e-10 52_[-2]_19 chrXI:74419-74817 4.4e-10 55_[-2]_16 chrXI:83962-84470 6.4e-10 41_[-2]_30 chrXII:628143-628687 7.2e-10 17_[-2]_54 chrXV:353884-354305 1.8e-09 40_[+2]_31 chrVII:661516-661953 3.1e-09 64_[-2]_7 chrVII:1003993-1004431 3.1e-09 53_[-2]_18 chrVIII:466654-467291 3.1e-09 67_[-2]_4 chrXIV:546555-547593 5.8e-09 69_[-2]_2 chrI:138956-139354 5.8e-09 46_[-2]_25 chrXII:92337-92833 5.8e-09 12_[-2]_59 chrII:326557-327139 7e-09 38_[+2]_33 chrXI:46546-47024 1.4e-08 42_[+2]_29 chrV:99901-100436 1.6e-08 14_[-2]_57 chrX:517644-517744 1.6e-08 36_[+2]_35 chrVII:845363-845961 2.5e-08 36_[-2]_35 chrXVI:775607-776071 2.5e-08 18_[+2]_53 chrXV:226442-226889 2.5e-08 37_[+2]_34 chrII:642855-643262 2.5e-08 41_[+2]_30 chrXII:875095-875643 3.9e-08 56_[-2]_15 chrXV:438381-438974 3.9e-08 15_[-2]_56 chrXIII:572666-573192 4.2e-08 47_[+2]_24 chrIV:1175584-1176110 4.2e-08 31_[-2]_40 chrV:435611-436021 9.2e-08 29_[+2]_42 chrIII:151014-151607 9.2e-08 67_[+2]_4 chrXIII:747697-748143 1.9e-07 64_[+2]_7 chrXI:99019-102385 5.1e-07 20_[+2]_51 chrXI:302667-303234 5.1e-07 17_[-2]_54 chrIII:66-1038 2e-06 41_[+2]_30 chrXV:274459-274997 4.1e-06 2_[-2]_69 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SNNSSCYTWWMCCACTVGGCCAMVVRRSC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SNNSSCYTWWMCCACTVGGCCAMVVRRSC width=29 seqs=48 chrXIV:602108-602583 ( 17) GGTGCCTTAACCAACTGGGCCAAGAGACC 1 chrIX:183278-183726 ( 33) GGTGCCTTAACCAACTGGGCCAAGAGACC 1 chrII:197247-197837 ( 2) GGTGCCTTAACCAACTGGGCCAAGAGACC 1 chrX:424277-424377 ( 40) GCCGCCTTAGACCACTCGGCCAACCCTCC 1 chrII:9366-9890 ( 5) GCCGCCTTAGACCACTCGGCCAACCCTCC 1 chrXII:962765-963293 ( 48) GCCGCCTTAGACCACTCGGCCAACCCTCC 1 chrXVI:689346-689872 ( 6) TGTCGCCTTAACCACTCGGCCATAGTGCC 1 chrV:438494-438993 ( 7) GATGCCATAACCGACTAGACCACGAAACC 1 chrXII:656830-657209 ( 9) GAGCGCGCTACCGACTACGCCACACGCCC 1 chrX:378228-378328 ( 20) GATGCCATAACCGACTAGACCACGAAACC 1 chrXI:219716-220141 ( 17) GAGCGCGCTACCGACTACGCCACACGCCC 1 chrVII:823342-823717 ( 3) GATGCCATAACCGACTAGACCACGAAACC 1 chrV:469248-469658 ( 54) GATGCCATAACCGACTAGACCACGAAACC 1 chrIV:1150680-1151206 ( 20) CATCGCCTTAACCACTCGGCCACTGGGAC 1 chrIV:1305392-1305928 ( 20) TTTCGCCTTAACCACTCGGCCAAGTTGCC 1 chrXIII:258998-259383 ( 71) TTTCGCCTTAACCACTCGGCCAAGTTGCC 1 chrXII:167749-168242 ( 52) TTTCGCCTTAACCACTCGGCCAAGTTGCC 1 chrIII:127572-127902 ( 29) CACGCCTTAACCAACTTGGCCATGGAGTC 1 chrXV:228063-228594 ( 53) CACGCCTTAACCAACTTGGCCATGGAGTC 1 chrXI:74419-74817 ( 56) CACGCCTTAACCAACTTGGCCATGGAGTC 1 chrXI:83962-84470 ( 42) GCCGCATTAGACCACTCGGCCAACCCTCC 1 chrXII:628143-628687 ( 18) GGCGCCTTAGACCGCTCGGCCAAACAACC 1 chrXV:353884-354305 ( 41) TGGCGCCTTACCAACTTGGCCATAGAAGC 1 chrVII:661516-661953 ( 65) GCAACGCTCTACCACTAAGCTAAGGAGGC 1 chrVII:1003993-1004431 ( 54) GCAACGCTCTACCACTAAGCTAAGGAGGC 1 chrVIII:466654-467291 ( 68) GCAACGCTCTACCACTAAGCTAAGGAGGC 1 chrXIV:546555-547593 ( 70) CGAGAATCATACCACTAGACCACACGCCC 1 chrI:138956-139354 ( 47) CGAGAATCATACCACTAGACCACACGCCC 1 chrXII:92337-92833 ( 13) CGAGAATCATACCACTAGACCACACGCCC 1 chrII:326557-327139 ( 39) GACGTCTTGAACCACTGGACCATTGGACC 1 chrXI:46546-47024 ( 43) GCGATGCCTTACCACTTGGCCAAAAGGGC 1 chrV:99901-100436 ( 15) CCTGCGCGCTTCCACTGCGCCACGGCGCT 1 chrX:517644-517744 ( 37) CCTGCGCGCTTCCACTGCGCCACGGCGCT 1 chrVII:845363-845961 ( 37) GTTGGATTTTACCACTAAACCACTTGCGC 1 chrXVI:775607-776071 ( 19) CTGCTGCGCTACCACTGCGCCATACGAGC 1 chrXV:226442-226889 ( 38) GTTGGATTTTACCACTAAACCACTTGCGC 1 chrII:642855-643262 ( 42) CTGCTGCGCTACCACTGCGCCATACGAGC 1 chrXII:875095-875643 ( 57) GAACGCTCTACCAACTGAGCTAACAAGGA 1 chrXV:438381-438974 ( 16) GAACGCTCTACCAACTGAGCTAACAAGGA 1 chrXIII:572666-573192 ( 48) TGACGCTCTTCCTACTGAGCTACTGAAGC 1 chrIV:1175584-1176110 ( 32) TGACGCTCTTCCTACTGAGCTACTGAAGC 1 chrV:435611-436021 ( 30) ATACGCGCTACCGATTGCGCCAACAAGGC 1 chrIII:151014-151607 ( 68) ATACGCGCTACCGATTGCGCCAACAAGGC 1 chrXIII:747697-748143 ( 65) CAGACGCGTTGCCATTACGCCACGCGAGC 1 chrXI:99019-102385 ( 21) GGACGCTTACTCCACAAGACCATTAACCC 1 chrXI:302667-303234 ( 18) CGAAAGCTCTACCATTGAGCCACCGCTTC 1 chrIII:66-1038 ( 42) TTACCCGTATCCAACTCCACTACCGCTTA 1 chrXV:274459-274997 ( 3) TAGCAGGGCATCGCCTTAACCACTCGGCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SNNSSCYTWWMCCACTVGGCCAMVVRRSC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 43200 bayes= 11.7202 E= 1.0e-116 -289 50 138 -72 2 12 50 -57 2 -3 -20 11 -130 105 132 -1223 -156 126 89 -189 -130 175 26 -1223 -189 80 -62 57 -1223 38 -62 102 43 -3 -320 28 70 -320 -88 28 64 112 -320 -189 -1223 238 -1223 -1223 -57 155 -3 -289 164 -320 -320 -1223 -1223 226 -1223 -189 -388 -1223 -1223 167 11 26 70 -130 -43 12 155 -1223 -19 -1223 193 -1223 -1223 238 -1223 -1223 -1223 212 -1223 -89 170 -1223 -1223 -1223 36 112 -1223 -72 -43 12 105 -89 -19 61 80 -156 36 -20 89 -189 2 -20 105 -130 -388 150 80 -156 -230 222 -1223 -289 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SNNSSCYTWWMCCACTVGGCCAMVVRRSC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 48 E= 1.0e-116 0.041667 0.270833 0.500000 0.187500 0.312500 0.208333 0.270833 0.208333 0.312500 0.187500 0.166667 0.333333 0.125000 0.395833 0.479167 0.000000 0.104167 0.458333 0.354167 0.083333 0.125000 0.645833 0.229167 0.000000 0.083333 0.333333 0.125000 0.458333 0.000000 0.250000 0.125000 0.625000 0.416667 0.187500 0.020833 0.375000 0.500000 0.020833 0.104167 0.375000 0.479167 0.416667 0.020833 0.083333 0.000000 1.000000 0.000000 0.000000 0.208333 0.562500 0.187500 0.041667 0.958333 0.020833 0.020833 0.000000 0.000000 0.916667 0.000000 0.083333 0.020833 0.000000 0.000000 0.979167 0.333333 0.229167 0.312500 0.125000 0.229167 0.208333 0.562500 0.000000 0.270833 0.000000 0.729167 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.833333 0.000000 0.166667 1.000000 0.000000 0.000000 0.000000 0.395833 0.416667 0.000000 0.187500 0.229167 0.208333 0.395833 0.166667 0.270833 0.291667 0.333333 0.104167 0.395833 0.166667 0.354167 0.083333 0.312500 0.166667 0.395833 0.125000 0.020833 0.541667 0.333333 0.104167 0.062500 0.895833 0.000000 0.041667 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SNNSSCYTWWMCCACTVGGCCAMVVRRSC MEME-2 regular expression -------------------------------------------------------------------------------- [GC][AGCT][TA][GC][CG][CG][TC][TC][AT][AT][AC]C[CA]ACT[AGC][GAC][GA]CCA[CA][GAC][GCA][AG][GA][CG]C -------------------------------------------------------------------------------- Time 668.98 secs. ******************************************************************************** ******************************************************************************** MOTIF DTTTMYWTYWYYTTYTTYYTTTYTYTYYY MEME-3 width = 29 sites = 98 llr = 1055 E-value = 7.3e-048 ******************************************************************************** -------------------------------------------------------------------------------- Motif DTTTMYWTYWYYTTYTTYYTTTYTYTYYY MEME-3 Description -------------------------------------------------------------------------------- Simplified A 3211323123211:11112:::12::1:2 pos.-specific C 121255:2313311332332:14:43344 probability G 3:221:11:211:21:::::11::::121 matrix T 47662466554587576557885867543 bits 2.4 2.1 1.9 1.7 Relative 1.4 Entropy 1.2 (15.5 bits) 1.0 * *** *** 0.7 ** * ******* 0.5 *** ** * *** *** ******* * 0.2 ********* ****************** 0.0 ----------------------------- Multilevel TTTTCCTTTTTTTTTTTTTTTTTTTTTTC consensus G ATA CACC CCCCCC CACCCCT sequence A A A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DTTTMYWTYWYYTTYTTYYTTTYTYTYYY MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrXII:48692-49115 - 3 1.69e-11 CCTTTTCTTT TTTTCTTTTTTTTTTTTTTTTTTTTTTTT GG chrI:69874-70438 - 69 2.11e-09 GAC AATTCCTTTTTTTCCTTTTTTTTTCTTCT CACTTTTCGG chrVII:364018-364432 - 8 1.07e-08 ATGACTTATA ATTGGCTTTATTTTCTTCTCTTTTTTTTC ACATGCG chrXVI:856720-857425 + 28 2.44e-08 GGCTTAGTGA TTTTCATTCCCCTCTTTTCTTTTTCCTCT CAGCCTGCAA chrX:390774-390874 - 2 3.34e-08 GTATATCTTT TTTCCCTCTATTTTGTTTTTTTTTTCTTT G chrXVI:572022-572750 + 62 3.34e-08 TTGCGAATAA TTTTTCTTCCCATTTCCCCTTTCTTTTCC CTTTAACATG chrIV:519656-520127 + 56 3.90e-08 TTTCCAAGTA ATGTTTTTTTTTTTTTTTTTTTTTTTAGC TCCTCTCACA chrXII:645290-646293 + 36 4.54e-08 TCTTCCTCTT TCTTCCTTTCCCTTTCCCTCTTCTTCTTA TCTCAACAAC chrVII:609282-611482 + 71 6.12e-08 ATACAGGAGG ATCTATTCTTTTTTTTCTTCTTCTCTTCT T chrXIII:807789-808557 + 35 6.12e-08 TTTCTTTTTC TTACCTTTCTCTTTTTATTTTTTTCTCGC ATTGGTTCAA chrVII:771868-772296 + 14 6.12e-08 TAGCACTATT TCAGCCGTATTTTTCTTTTTTTCTTTCGC ACCGTCTGTG chrXII:214645-215064 - 57 7.09e-08 GATTCCGGTT GCGTCCATTTATTTTTTACTTTTATTCTC CTTTATTTTT chrXIV:102570-103211 + 37 9.46e-08 AGTTTCTCTC TTTTCCTTTAACTGCTTTACTTCTCCCGA GAAAGCAAGA chrII:415507-416124 + 1 1.09e-07 . TTTTTTTTTTTTTTTTCTTTTTCATTGTT TGGTTGCCTT chrIII:162113-164257 - 26 1.25e-07 GAGCAAATAA GTTAACTTTTTCATCTCTTTTTTTTTCTC AACTTCAAAC chrIV:490545-491264 - 16 1.44e-07 GATATGCTAT ATTTAATTCTTCTTTTTCTTGTCTTTACT AGAGGTGGAA chrVI:226297-226974 - 22 1.44e-07 TTTTGCATAT TTTCCTATATTTTCCTATATTTTTTTCTC GGCTCTTATA chrX:90031-90131 - 20 1.44e-07 TAAAAGGATG CCGTCCTTTTTCCGTCTTCCTTCTTTTTC GTAAGCGACG chrII:44946-45366 - 17 1.65e-07 CTCAGCCTCG TTTGGCTCATCGTTCTTCATTTCTTTTTC CTAATTTTGA chrIII:142118-143005 - 54 2.47e-07 GTTATGAAAA TTTTCTACTCTCTTTCACATTTTTTTTTT CATAAGAATT chrXIII:362941-363415 - 25 2.47e-07 ATAATTCATG TCGTTTGTTGCCTTCCCTTTTTCTTTTCT TTGAAAAAAA chrV:225434-225728 - 21 2.81e-07 ATCTCCGGCG GCGACCGCCGGCTTTTTTCTTTCTTTTTC TGGAAAAAGA chrXI:257782-260115 + 70 3.63e-07 AAATCTGGAA CCGTCCTTTTTCCTCTTTCTTGCATTTCC CT chrIX:186502-188022 + 5 4.67e-07 AACC ATGTCAATTGGTTTACCCTTTTCTCCCTC TACAGACTTA chrVII:648768-649393 - 54 5.29e-07 TATTCTTTTT GTTTTCATCGCCTTCTTTTTATTTTTATC CGAAGATCTT chrXIV:351506-352968 - 47 5.29e-07 TGCAACAGCT TTTTCCTCTCGCTTTGTTCTTTTTCCTCT GACATGCATG chrIV:416394-417259 - 27 5.97e-07 GAGTAGATCA GTTCCATTTTGTTCATCCTTTTCTCCTCA AGGAAGAACT chrXIV:217238-217729 + 1 5.97e-07 . GTTGCTTCCGGTTGCTTTCTTTCTCCGCG GAATGACTGG chrIX:138000-139245 - 43 5.97e-07 GGTTTTTGCG GTTGACTACTCCTGCTTCATGTCTTTTCT CCCCTGCCAT chrIV:980732-981217 - 8 6.74e-07 TTACCAAAAA TTTTCCTCAATCTTTTTAATTTTACTTTA ATAGTAC chrXII:1028112-1028585 + 28 7.60e-07 CTCATGCTTC ATGTCCTACCTTTTTTCCTTCTTTCTTCC TTGTCTTAAT chrXII:59-219 - 39 9.61e-07 AAAGAACAGG GTTTCATTTTCATTTTTTTTTTAATTTCG GTCAGAAAGC chrXIII:352086-352639 + 63 9.61e-07 TTCGCATTAA TTTTTTTTTACTTTTCATTCGTTTTCCTC TTTTGGTGA chrII:604050-607131 + 35 9.61e-07 TCATTTTTCA TTTTACTTTGTCATTTTTATTTCATTTGA AAATGGGTAG chrIV:83434-83828 + 45 1.36e-06 GCAAGTTTAA TTTTTTTTCTTTTTCCACATTGTTTTCCA CTTTGCACTC chrIV:322181-323618 - 27 1.36e-06 ACAATGGGTT CTTGGCGTCTTCTTCTTCGTTTCTCTTTC TGGAAATTCT chrXVI:880067-880570 - 6 1.36e-06 GATCCCGCTA GAGACCATTTCTTTTCTCTTTCTTTTTCT CGAAA chrXV:1003891-1005281 + 30 1.69e-06 TATTATCAGT ATTCCCTTCAAGCTCCCCTTTTTTTTATC AATTAAGGTT chrIV:464804-466122 + 13 1.69e-06 CCGTTTTCTA TTTTCTTTAGGTCTTTCCATTGTATTCCC TGCAACCCCG chrXIV:418276-418497 + 4 1.89e-06 TCA ATTTCATCTTCATCTTTTTCGTCTTCTTC ATCTGAACTG chrVII:702844-704579 - 22 1.89e-06 TGTAAGATAT ATTGACTTTCGTTTACCCCCTTCTCTTCA TTACTATTAA chrXIII:555814-558230 + 9 1.89e-06 GTGGAGAA GATCCCTGTCGCTTTCTTTTTTTACCTCA AAACCAAATG chrXI:333691-335014 - 6 2.61e-06 CATTTTTAAT GTATATGTAACCTCTCTCTCTTTTTTCTC TGCAT chrII:36234-36849 + 5 2.61e-06 TTTT TTGCTAGCATTCTTTTTTTTTTCATTTCT AGGCCTGTTT chrXI:21315-21788 + 14 2.61e-06 GACTCGCAAC GACTCCAATGATTTCTTCTTTTCACCCTT TGAACGGCCG chrXIV:198241-198504 + 17 2.90e-06 GGAGTATGCA TCTTATAGCGGTTTTTCCAGTTCTTTTCC ACTATTACGT chrX:531542-531642 + 33 2.90e-06 GATTCCGGGC TTGCGCAGTTTCTTTTCTTTTTTTCTGGA AAATAAGAAA chrVII:255185-255698 + 67 2.90e-06 ATCCGATTCT TACTCCATATCATGCCATTTTTCTTTCCT TTCTC chrVII:254118-254732 + 2 2.90e-06 A GTTTTTTTTTCCTGAAACTTTTTTTTCGC ACACAATAAT chrXIV:568051-568629 - 17 3.22e-06 CTATATAGAG TATTAATGCATTTTTTTTTTTTATCTCCA GCATTAAACG chrXVI:134555-134707 + 43 3.22e-06 TGTCACCTTG GTCAACTCTTTCCTTTTCATGTTTTTCTC AAACTTGTTT chrXIII:504912-505255 - 60 3.56e-06 TTTTATTGTA TTTTCCAATGTTTTTCATATTTCTTACTC AACTGACTTC chrIV:129887-131009 + 48 3.95e-06 TCTTTCTCTT AAGTCTTCTAGTTCTCTTCTTTCTCCACT TGGCTCTCAT chrVIII:145780-146491 + 11 4.83e-06 CATGTATAGA GTTTTTATTTTGTGCTTTTTATCTTTCTA AAAATCAAAT chrX:607895-607995 + 49 4.83e-06 ATATCATTTA GATTATTGTTTTTTAATTTTTTTTTTATC AGATGTTGTT chrI:68279-68929 - 58 4.83e-06 CCACAATCAA TTTCACTTTTTCATATATATTTTTCCACC TTATTATCAC chrXII:88204-88446 + 5 4.83e-06 TGCT GTTCCTAACTTTTCTTTCATTGTTCTTGT AGATATATAT chrXIII:751303-752032 - 55 5.33e-06 ATCCATGCAA GAGGCTAATGCGTTTTTCTTTTTTTTTTT TAGAGTGCGA chrIX:385314-387383 - 55 5.33e-06 TTTGTAATTT GCCTCTTGCGTCTGCTTTATTCTATTCGC AGTTTGATCG chrXIII:758945-760159 + 38 5.87e-06 TTTCTACTCT TAGCCCTCATCTTTCTCTTCTGCATTCTT TTCACCTCAT chrVIII:16556-18324 + 69 7.12e-06 TTATTGCCAT TTTTGCATCTCTCTATTCATTTTACTAGT TGC chrVII:779394-779952 + 70 7.12e-06 GCTCAAGATT ACTTTTTTAATTTTCATACTTTTTCTCCT AA chrXVI:452804-454322 - 13 7.12e-06 ATTGACCCAC GCTTGCTGCGTCTCTTCTCTTGCTCCCGG CCACAACAAC chrVII:397865-400168 + 69 8.60e-06 GTAAAGTACC TTTGCATTTAAACGTTTTCCTTTTCTCCG TTT chrVII:291688-291991 - 39 8.60e-06 CCAAGGCCTA AATTTTGTTATTTGCTAAATTTCTCTCCC TCCCAGTTCT chrXIV:725872-726337 - 61 9.44e-06 TTCGAACCTC GCATCCTTCAGTATTTTTTTTTATTTTGT CGGGGCCACC chrXII:710537-710897 - 36 9.44e-06 CGTGGGTGTG ATTCCTGCTTGTTGGTATTTTTTTTTGTC GCTGGTGAAA chrVII:323456-324880 + 68 1.04e-05 AGTGAGTTGT TTTTACTGTGATTTGCTTTTTCTTTCGCT CATG chrI:180940-181527 + 62 1.13e-05 TTCGAATCTC TTAGCAACCATTATTTTTTCTTTTTCCTC CTATACTTCA chrVII:730585-730748 - 17 1.13e-05 GTGCAGAAAA ATTTCCATTACCTTCCTCTCGATTCCCTT ATTAGAGATT chrXII:459626-460683 + 1 1.24e-05 . GTTGCTTCTTATTCCTTCCCGCTTTCCTG CACTAACATT chrXV:113474-113882 - 72 1.24e-05 . TTTTCCTTTTGTTGATTCCTATATCCCGG AGAAGAACTA chrXVI:718327-719661 - 26 1.36e-05 CTGTTAAAGG GTCGCCGTCTACTCTCATCGTTCTTTTGT GTACAAATTT chrVIII:214164-214348 + 42 1.62e-05 AGCGGGTACC ATGAATAGCTTTTTTTTTTTTTTTTATTC GAAATCTGGG chrXII:329391-329631 - 4 1.62e-05 CTAGGGTCAG ACGGCATTTTTTCGTCTTTTTTTATCCGG TTT chrXII:932096-932536 - 46 1.76e-05 ACAAAAACCG ATTTTATTATCCTCGTTTCTGTTTCTCTA CATCCGTGCA chrVII:185186-185939 - 59 1.92e-05 TTGTGTTGAG ATTTGTTGCTTGCGCTTCTTTTATCCTTT TAAACCGCTT chrXVI:559937-560293 + 65 2.09e-05 AAATAATTGG CTCTATTTATTTTTCTTTCTTCAACTTGC AAGAGTT chrVII:736181-736902 - 60 2.09e-05 TAACGAAGTG GAGGAAGTAACTTTTTTTTTTTTTTTATA AATTTATACA chrIV:1467451-1469688 - 28 2.09e-05 ATTTCTGTTG ATTTAAACATATTTCTTTCGTGCTTCTTC AAAGTTGAGA chrXVI:699847-700667 + 66 2.28e-05 CCCAAGCACA GCATACTAAATTCCCCCTCTTTCTTCCTC TAGGGT chrIV:1013419-1013966 + 71 2.47e-05 AAAAACAACA ACCGATAGTAAATTTTCTTCTTTTTTTCC T chrXI:490713-491378 + 55 3.16e-05 GAATTTTTTT ACTTTTATAATTTTCTTATTATCTTTTCA GTTATTGAGT chrVII:784630-785188 - 38 3.16e-05 GCTCGAGAAT AATTACTTTATTCTTATCCCTCCACTCCT TTCAGGTATT chrX:348792-348892 - 23 3.42e-05 GACAAGGACA CTTTATATATCTTTTTCAATCTCTCTATC CGGCCTTCTT chrVII:541709-542166 - 55 3.42e-05 TCAGCCAAGA ATTTATATTGACTTTACTACCTCTTTTTC AAGAGGTAAG chrIV:434053-435022 + 63 3.42e-05 GAATCGATAG TTCTACATAATGTTATTATTTTATCTTCT TTCCTTTTA chrX:157439-157539 + 52 3.70e-05 ACAACCTCGA TAGTGCTTTCTTTGTCCCATTTTATTATG CTACTTGTTG chrXIII:116958-119902 + 33 3.70e-05 CGAAAAGACT TTTTCTGTCACTTCTTAACCTCCATTTCG TTCCATCAGT chrXII:521912-522431 + 22 3.70e-05 ATGAATTTTA GTTTACGTCGACTGCCGCTGTTCATTCTC ATCAAAACAC chrV:207362-207887 - 8 4.33e-05 CAAAAAAAAT TTGTACATATAACTTTTTATTCTACTTTT ATATGCT chrVI:101122-101553 + 41 4.33e-05 CTTTAATCAC TCTCCTATCTAAATATTTCTGTTTTTCTT ATTAACGCAA chrIV:321614-321950 + 44 5.04e-05 TTTTTCCATT ATTCACAATATTTTCATACCTTTACCTCC GTACACCAAT chrVIII:48135-48674 - 71 5.86e-05 G TACCGTGCCTCCTGATTCCCTTTTTCACC GTACTCATTC chrXIV:575983-577518 - 36 6.31e-05 GGCACCACCT TTTCCTAGACCTTTACCACCTTTACCTCT ACCGGACATT chrXVI:213051-215223 - 45 7.30e-05 CCGGCGTTTT CTTGTCTCTTAATGCCTCCTGTTTCTGTT AATTGGTAAG chrVII:405466-405922 + 45 7.84e-05 AGTTAGGAAT GTATACATTAACAGTCTATTTTTTCTTGA AACCTTTCTT chrV:490748-491948 - 49 9.68e-05 GACAACCGGC GCCTCATGTAATCTGTACCTTTCTCTACA GTTACATAGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DTTTMYWTYWYYTTYTTYYTTTYTYTYYY MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:48692-49115 1.7e-11 2_[-3]_69 chrI:69874-70438 2.1e-09 68_[-3]_3 chrVII:364018-364432 1.1e-08 7_[-3]_64 chrXVI:856720-857425 2.4e-08 27_[+3]_44 chrX:390774-390874 3.3e-08 1_[-3]_70 chrXVI:572022-572750 3.3e-08 61_[+3]_10 chrIV:519656-520127 3.9e-08 55_[+3]_16 chrXII:645290-646293 4.5e-08 35_[+3]_36 chrVII:609282-611482 6.1e-08 70_[+3]_1 chrXIII:807789-808557 6.1e-08 34_[+3]_37 chrVII:771868-772296 6.1e-08 13_[+3]_58 chrXII:214645-215064 7.1e-08 56_[-3]_15 chrXIV:102570-103211 9.5e-08 36_[+3]_35 chrII:415507-416124 1.1e-07 [+3]_71 chrIII:162113-164257 1.3e-07 25_[-3]_46 chrIV:490545-491264 1.4e-07 15_[-3]_56 chrVI:226297-226974 1.4e-07 21_[-3]_50 chrX:90031-90131 1.4e-07 19_[-3]_52 chrII:44946-45366 1.7e-07 16_[-3]_55 chrIII:142118-143005 2.5e-07 53_[-3]_18 chrXIII:362941-363415 2.5e-07 24_[-3]_47 chrV:225434-225728 2.8e-07 20_[-3]_51 chrXI:257782-260115 3.6e-07 69_[+3]_2 chrIX:186502-188022 4.7e-07 4_[+3]_67 chrVII:648768-649393 5.3e-07 53_[-3]_18 chrXIV:351506-352968 5.3e-07 46_[-3]_25 chrIV:416394-417259 6e-07 26_[-3]_45 chrXIV:217238-217729 6e-07 [+3]_71 chrIX:138000-139245 6e-07 42_[-3]_29 chrIV:980732-981217 6.7e-07 7_[-3]_64 chrXII:1028112-1028585 7.6e-07 27_[+3]_44 chrXII:59-219 9.6e-07 38_[-3]_33 chrXIII:352086-352639 9.6e-07 62_[+3]_9 chrII:604050-607131 9.6e-07 34_[+3]_37 chrIV:83434-83828 1.4e-06 44_[+3]_27 chrIV:322181-323618 1.4e-06 26_[-3]_45 chrXVI:880067-880570 1.4e-06 5_[-3]_66 chrXV:1003891-1005281 1.7e-06 29_[+3]_42 chrIV:464804-466122 1.7e-06 12_[+3]_59 chrXIV:418276-418497 1.9e-06 3_[+3]_68 chrVII:702844-704579 1.9e-06 21_[-3]_50 chrXIII:555814-558230 1.9e-06 8_[+3]_63 chrXI:333691-335014 2.6e-06 5_[-3]_66 chrII:36234-36849 2.6e-06 4_[+3]_67 chrXI:21315-21788 2.6e-06 13_[+3]_58 chrXIV:198241-198504 2.9e-06 16_[+3]_55 chrX:531542-531642 2.9e-06 32_[+3]_39 chrVII:255185-255698 2.9e-06 66_[+3]_5 chrVII:254118-254732 2.9e-06 1_[+3]_70 chrXIV:568051-568629 3.2e-06 16_[-3]_55 chrXVI:134555-134707 3.2e-06 42_[+3]_29 chrXIII:504912-505255 3.6e-06 59_[-3]_12 chrIV:129887-131009 3.9e-06 47_[+3]_24 chrVIII:145780-146491 4.8e-06 10_[+3]_61 chrX:607895-607995 4.8e-06 48_[+3]_23 chrI:68279-68929 4.8e-06 57_[-3]_14 chrXII:88204-88446 4.8e-06 4_[+3]_67 chrXIII:751303-752032 5.3e-06 54_[-3]_17 chrIX:385314-387383 5.3e-06 54_[-3]_17 chrXIII:758945-760159 5.9e-06 37_[+3]_34 chrVIII:16556-18324 7.1e-06 68_[+3]_3 chrVII:779394-779952 7.1e-06 69_[+3]_2 chrXVI:452804-454322 7.1e-06 12_[-3]_59 chrVII:397865-400168 8.6e-06 68_[+3]_3 chrVII:291688-291991 8.6e-06 38_[-3]_33 chrXIV:725872-726337 9.4e-06 60_[-3]_11 chrXII:710537-710897 9.4e-06 35_[-3]_36 chrVII:323456-324880 1e-05 67_[+3]_4 chrI:180940-181527 1.1e-05 61_[+3]_10 chrVII:730585-730748 1.1e-05 16_[-3]_55 chrXII:459626-460683 1.2e-05 [+3]_71 chrXV:113474-113882 1.2e-05 71_[-3] chrXVI:718327-719661 1.4e-05 25_[-3]_46 chrVIII:214164-214348 1.6e-05 41_[+3]_30 chrXII:329391-329631 1.6e-05 3_[-3]_68 chrXII:932096-932536 1.8e-05 45_[-3]_26 chrVII:185186-185939 1.9e-05 58_[-3]_13 chrXVI:559937-560293 2.1e-05 64_[+3]_7 chrVII:736181-736902 2.1e-05 59_[-3]_12 chrIV:1467451-1469688 2.1e-05 27_[-3]_44 chrXVI:699847-700667 2.3e-05 65_[+3]_6 chrIV:1013419-1013966 2.5e-05 70_[+3]_1 chrXI:490713-491378 3.2e-05 54_[+3]_17 chrVII:784630-785188 3.2e-05 37_[-3]_34 chrX:348792-348892 3.4e-05 22_[-3]_49 chrVII:541709-542166 3.4e-05 54_[-3]_17 chrIV:434053-435022 3.4e-05 62_[+3]_9 chrX:157439-157539 3.7e-05 51_[+3]_20 chrXIII:116958-119902 3.7e-05 32_[+3]_39 chrXII:521912-522431 3.7e-05 21_[+3]_50 chrV:207362-207887 4.3e-05 7_[-3]_64 chrVI:101122-101553 4.3e-05 40_[+3]_31 chrIV:321614-321950 5e-05 43_[+3]_28 chrVIII:48135-48674 5.9e-05 70_[-3]_1 chrXIV:575983-577518 6.3e-05 35_[-3]_36 chrXVI:213051-215223 7.3e-05 44_[-3]_27 chrVII:405466-405922 7.8e-05 44_[+3]_27 chrV:490748-491948 9.7e-05 48_[-3]_23 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DTTTMYWTYWYYTTYTTYYTTTYTYTYYY MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF DTTTMYWTYWYYTTYTTYYTTTYTYTYYY width=29 seqs=98 chrXII:48692-49115 ( 3) TTTTCTTTTTTTTTTTTTTTTTTTTTTTT 1 chrI:69874-70438 ( 69) AATTCCTTTTTTTCCTTTTTTTTTCTTCT 1 chrVII:364018-364432 ( 8) ATTGGCTTTATTTTCTTCTCTTTTTTTTC 1 chrXVI:856720-857425 ( 28) TTTTCATTCCCCTCTTTTCTTTTTCCTCT 1 chrX:390774-390874 ( 2) TTTCCCTCTATTTTGTTTTTTTTTTCTTT 1 chrXVI:572022-572750 ( 62) TTTTTCTTCCCATTTCCCCTTTCTTTTCC 1 chrIV:519656-520127 ( 56) ATGTTTTTTTTTTTTTTTTTTTTTTTAGC 1 chrXII:645290-646293 ( 36) TCTTCCTTTCCCTTTCCCTCTTCTTCTTA 1 chrVII:609282-611482 ( 71) ATCTATTCTTTTTTTTCTTCTTCTCTTCT 1 chrXIII:807789-808557 ( 35) TTACCTTTCTCTTTTTATTTTTTTCTCGC 1 chrVII:771868-772296 ( 14) TCAGCCGTATTTTTCTTTTTTTCTTTCGC 1 chrXII:214645-215064 ( 57) GCGTCCATTTATTTTTTACTTTTATTCTC 1 chrXIV:102570-103211 ( 37) TTTTCCTTTAACTGCTTTACTTCTCCCGA 1 chrII:415507-416124 ( 1) TTTTTTTTTTTTTTTTCTTTTTCATTGTT 1 chrIII:162113-164257 ( 26) GTTAACTTTTTCATCTCTTTTTTTTTCTC 1 chrIV:490545-491264 ( 16) ATTTAATTCTTCTTTTTCTTGTCTTTACT 1 chrVI:226297-226974 ( 22) TTTCCTATATTTTCCTATATTTTTTTCTC 1 chrX:90031-90131 ( 20) CCGTCCTTTTTCCGTCTTCCTTCTTTTTC 1 chrII:44946-45366 ( 17) TTTGGCTCATCGTTCTTCATTTCTTTTTC 1 chrIII:142118-143005 ( 54) TTTTCTACTCTCTTTCACATTTTTTTTTT 1 chrXIII:362941-363415 ( 25) TCGTTTGTTGCCTTCCCTTTTTCTTTTCT 1 chrV:225434-225728 ( 21) GCGACCGCCGGCTTTTTTCTTTCTTTTTC 1 chrXI:257782-260115 ( 70) CCGTCCTTTTTCCTCTTTCTTGCATTTCC 1 chrIX:186502-188022 ( 5) ATGTCAATTGGTTTACCCTTTTCTCCCTC 1 chrVII:648768-649393 ( 54) GTTTTCATCGCCTTCTTTTTATTTTTATC 1 chrXIV:351506-352968 ( 47) TTTTCCTCTCGCTTTGTTCTTTTTCCTCT 1 chrIV:416394-417259 ( 27) GTTCCATTTTGTTCATCCTTTTCTCCTCA 1 chrXIV:217238-217729 ( 1) GTTGCTTCCGGTTGCTTTCTTTCTCCGCG 1 chrIX:138000-139245 ( 43) GTTGACTACTCCTGCTTCATGTCTTTTCT 1 chrIV:980732-981217 ( 8) TTTTCCTCAATCTTTTTAATTTTACTTTA 1 chrXII:1028112-1028585 ( 28) ATGTCCTACCTTTTTTCCTTCTTTCTTCC 1 chrXII:59-219 ( 39) GTTTCATTTTCATTTTTTTTTTAATTTCG 1 chrXIII:352086-352639 ( 63) TTTTTTTTTACTTTTCATTCGTTTTCCTC 1 chrII:604050-607131 ( 35) TTTTACTTTGTCATTTTTATTTCATTTGA 1 chrIV:83434-83828 ( 45) TTTTTTTTCTTTTTCCACATTGTTTTCCA 1 chrIV:322181-323618 ( 27) CTTGGCGTCTTCTTCTTCGTTTCTCTTTC 1 chrXVI:880067-880570 ( 6) GAGACCATTTCTTTTCTCTTTCTTTTTCT 1 chrXV:1003891-1005281 ( 30) ATTCCCTTCAAGCTCCCCTTTTTTTTATC 1 chrIV:464804-466122 ( 13) TTTTCTTTAGGTCTTTCCATTGTATTCCC 1 chrXIV:418276-418497 ( 4) ATTTCATCTTCATCTTTTTCGTCTTCTTC 1 chrVII:702844-704579 ( 22) ATTGACTTTCGTTTACCCCCTTCTCTTCA 1 chrXIII:555814-558230 ( 9) GATCCCTGTCGCTTTCTTTTTTTACCTCA 1 chrXI:333691-335014 ( 6) GTATATGTAACCTCTCTCTCTTTTTTCTC 1 chrII:36234-36849 ( 5) TTGCTAGCATTCTTTTTTTTTTCATTTCT 1 chrXI:21315-21788 ( 14) GACTCCAATGATTTCTTCTTTTCACCCTT 1 chrXIV:198241-198504 ( 17) TCTTATAGCGGTTTTTCCAGTTCTTTTCC 1 chrX:531542-531642 ( 33) TTGCGCAGTTTCTTTTCTTTTTTTCTGGA 1 chrVII:255185-255698 ( 67) TACTCCATATCATGCCATTTTTCTTTCCT 1 chrVII:254118-254732 ( 2) GTTTTTTTTTCCTGAAACTTTTTTTTCGC 1 chrXIV:568051-568629 ( 17) TATTAATGCATTTTTTTTTTTTATCTCCA 1 chrXVI:134555-134707 ( 43) GTCAACTCTTTCCTTTTCATGTTTTTCTC 1 chrXIII:504912-505255 ( 60) TTTTCCAATGTTTTTCATATTTCTTACTC 1 chrIV:129887-131009 ( 48) AAGTCTTCTAGTTCTCTTCTTTCTCCACT 1 chrVIII:145780-146491 ( 11) GTTTTTATTTTGTGCTTTTTATCTTTCTA 1 chrX:607895-607995 ( 49) GATTATTGTTTTTTAATTTTTTTTTTATC 1 chrI:68279-68929 ( 58) TTTCACTTTTTCATATATATTTTTCCACC 1 chrXII:88204-88446 ( 5) GTTCCTAACTTTTCTTTCATTGTTCTTGT 1 chrXIII:751303-752032 ( 55) GAGGCTAATGCGTTTTTCTTTTTTTTTTT 1 chrIX:385314-387383 ( 55) GCCTCTTGCGTCTGCTTTATTCTATTCGC 1 chrXIII:758945-760159 ( 38) TAGCCCTCATCTTTCTCTTCTGCATTCTT 1 chrVIII:16556-18324 ( 69) TTTTGCATCTCTCTATTCATTTTACTAGT 1 chrVII:779394-779952 ( 70) ACTTTTTTAATTTTCATACTTTTTCTCCT 1 chrXVI:452804-454322 ( 13) GCTTGCTGCGTCTCTTCTCTTGCTCCCGG 1 chrVII:397865-400168 ( 69) TTTGCATTTAAACGTTTTCCTTTTCTCCG 1 chrVII:291688-291991 ( 39) AATTTTGTTATTTGCTAAATTTCTCTCCC 1 chrXIV:725872-726337 ( 61) GCATCCTTCAGTATTTTTTTTTATTTTGT 1 chrXII:710537-710897 ( 36) ATTCCTGCTTGTTGGTATTTTTTTTTGTC 1 chrVII:323456-324880 ( 68) TTTTACTGTGATTTGCTTTTTCTTTCGCT 1 chrI:180940-181527 ( 62) TTAGCAACCATTATTTTTTCTTTTTCCTC 1 chrVII:730585-730748 ( 17) ATTTCCATTACCTTCCTCTCGATTCCCTT 1 chrXII:459626-460683 ( 1) GTTGCTTCTTATTCCTTCCCGCTTTCCTG 1 chrXV:113474-113882 ( 72) TTTTCCTTTTGTTGATTCCTATATCCCGG 1 chrXVI:718327-719661 ( 26) GTCGCCGTCTACTCTCATCGTTCTTTTGT 1 chrVIII:214164-214348 ( 42) ATGAATAGCTTTTTTTTTTTTTTTTATTC 1 chrXII:329391-329631 ( 4) ACGGCATTTTTTCGTCTTTTTTTATCCGG 1 chrXII:932096-932536 ( 46) ATTTTATTATCCTCGTTTCTGTTTCTCTA 1 chrVII:185186-185939 ( 59) ATTTGTTGCTTGCGCTTCTTTTATCCTTT 1 chrXVI:559937-560293 ( 65) CTCTATTTATTTTTCTTTCTTCAACTTGC 1 chrVII:736181-736902 ( 60) GAGGAAGTAACTTTTTTTTTTTTTTTATA 1 chrIV:1467451-1469688 ( 28) ATTTAAACATATTTCTTTCGTGCTTCTTC 1 chrXVI:699847-700667 ( 66) GCATACTAAATTCCCCCTCTTTCTTCCTC 1 chrIV:1013419-1013966 ( 71) ACCGATAGTAAATTTTCTTCTTTTTTTCC 1 chrXI:490713-491378 ( 55) ACTTTTATAATTTTCTTATTATCTTTTCA 1 chrVII:784630-785188 ( 38) AATTACTTTATTCTTATCCCTCCACTCCT 1 chrX:348792-348892 ( 23) CTTTATATATCTTTTTCAATCTCTCTATC 1 chrVII:541709-542166 ( 55) ATTTATATTGACTTTACTACCTCTTTTTC 1 chrIV:434053-435022 ( 63) TTCTACATAATGTTATTATTTTATCTTCT 1 chrX:157439-157539 ( 52) TAGTGCTTTCTTTGTCCCATTTTATTATG 1 chrXIII:116958-119902 ( 33) TTTTCTGTCACTTCTTAACCTCCATTTCG 1 chrXII:521912-522431 ( 22) GTTTACGTCGACTGCCGCTGTTCATTCTC 1 chrV:207362-207887 ( 8) TTGTACATATAACTTTTTATTCTACTTTT 1 chrVI:101122-101553 ( 41) TCTCCTATCTAAATATTTCTGTTTTTCTT 1 chrIV:321614-321950 ( 44) ATTCACAATATTTTCATACCTTTACCTCC 1 chrVIII:48135-48674 ( 71) TACCGTGCCTCCTGATTCCCTTTTTCACC 1 chrXIV:575983-577518 ( 36) TTTCCTAGACCTTTACCACCTTTACCTCT 1 chrXVI:213051-215223 ( 45) CTTGTCTCTTAATGCCTCCTGTTTCTGTT 1 chrVII:405466-405922 ( 45) GTATACATTAACAGTCTATTTTTTCTTGA 1 chrV:490748-491948 ( 49) GCCTCATGTAATCTGTACCTTTCTCTACA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DTTTMYWTYWYYTTYTTYYTTTYTYTYYY MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 43200 bayes= 9.2507 E= 7.3e-048 -27 -165 58 37 -101 -6 -1326 111 -211 -77 2 101 -259 -23 -23 101 -16 132 -106 -101 -101 132 -1326 25 -6 -1326 -53 89 -192 2 -53 94 -60 52 -1326 76 -27 -91 -23 64 -83 41 -53 51 -175 77 -165 76 -211 -53 -1326 137 -1326 -42 2 111 -133 77 -191 70 -233 47 -423 111 -111 23 -423 101 -146 86 -1326 81 -52 58 -423 67 -1326 16 -223 127 -292 -265 -91 142 -491 -123 -142 144 -211 109 -1326 76 -46 -1326 -1326 133 -1326 105 -1326 97 -392 52 -1326 119 -122 86 -165 57 -1326 98 -14 54 -92 113 -106 8 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DTTTMYWTYWYYTTYTTYYTTTYTYTYYY MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 98 E= 7.3e-048 0.255102 0.061224 0.285714 0.397959 0.153061 0.183673 0.000000 0.663265 0.071429 0.112245 0.193878 0.622449 0.051020 0.163265 0.163265 0.622449 0.275510 0.479592 0.091837 0.153061 0.153061 0.479592 0.000000 0.367347 0.295918 0.000000 0.132653 0.571429 0.081633 0.193878 0.132653 0.591837 0.204082 0.275510 0.000000 0.520408 0.255102 0.102041 0.163265 0.479592 0.173469 0.255102 0.132653 0.438776 0.091837 0.326531 0.061224 0.520408 0.071429 0.132653 0.000000 0.795918 0.000000 0.142857 0.193878 0.663265 0.122449 0.326531 0.051020 0.500000 0.061224 0.265306 0.010204 0.663265 0.142857 0.224490 0.010204 0.622449 0.112245 0.346939 0.000000 0.540816 0.214286 0.285714 0.010204 0.489796 0.000000 0.214286 0.040816 0.744898 0.040816 0.030612 0.102041 0.826531 0.010204 0.081633 0.071429 0.836735 0.071429 0.408163 0.000000 0.520408 0.224490 0.000000 0.000000 0.775510 0.000000 0.397959 0.000000 0.602041 0.020408 0.275510 0.000000 0.704082 0.132653 0.346939 0.061224 0.459184 0.000000 0.377551 0.173469 0.448980 0.163265 0.418367 0.091837 0.326531 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DTTTMYWTYWYYTTYTTYYTTTYTYTYYY MEME-3 regular expression -------------------------------------------------------------------------------- [TGA]TTT[CA][CT][TA]T[TCA][TA][TC][TC]TT[TC][TC][TC][TC][TCA][TC]TT[TC][TA][TC][TC][TC][TC][CT] -------------------------------------------------------------------------------- Time 982.84 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:372846-373743 5.75e-01 100 chrVIII:237636-238361 8.83e-01 100 chrXV:159255-160142 7.56e-01 100 chrVII:328373-328987 6.59e-01 100 chrXI:457607-458982 2.48e-02 100 chrI:166172-166688 7.93e-01 100 chrIV:1467451-1469688 5.67e-02 27_[-3(2.09e-05)]_44 chrXVI:821600-824090 5.96e-01 100 chrXIII:758945-760159 1.11e-02 37_[+3(5.87e-06)]_34 chrVII:574788-575258 1.65e-01 100 chrVII:478990-482993 1.31e-01 100 chrXI:614851-615294 1.85e-01 100 chrIV:802541-803008 4.91e-07 14_[-1(1.35e-09)]_65 chrIII:151014-151607 4.24e-10 31_[-1(1.02e-09)]_15_[+2(9.24e-08)]_\ 4 chrXVI:452804-454322 7.71e-03 12_[-3(7.12e-06)]_59 chrIV:1175584-1176110 1.33e-08 31_[-2(4.21e-08)]_15_[+1(4.82e-08)]_\ 4 chrXII:92337-92833 1.49e-05 12_[-2(5.77e-09)]_59 chrV:42157-42626 6.97e-01 100 chrXIV:575983-577518 6.49e-02 35_[-3(6.31e-05)]_36 chrIV:1075155-1075748 8.61e-08 78_[-1(8.87e-11)]_1 chrXII:603373-604087 9.08e-01 100 chrII:164746-165836 1.49e-01 100 chrII:347402-347936 2.49e-04 38_[+1(4.82e-08)]_41 chrXII:48692-49115 2.69e-07 2_[-3(1.69e-11)]_69 chrXVI:213051-215223 1.00e-01 44_[-3(7.30e-05)]_27 chrVII:515861-518087 7.40e-02 100 chrXV:841598-842973 6.48e-02 100 chrXII:282592-283993 3.06e-01 100 chrVII:882423-884116 6.31e-01 100 chrXV:903465-906343 4.37e-01 100 chrXIII:278928-280550 6.78e-02 51_[-1(8.05e-05)]_28 chrV:305810-306922 7.34e-01 100 chrXVI:622244-622875 3.85e-04 38_[-1(5.83e-08)]_41 chrII:604050-607131 5.08e-04 34_[+3(9.61e-07)]_37 chrIV:974130-974945 8.58e-01 100 chrXV:796727-798841 2.61e-01 100 chrIV:1016950-1017542 2.83e-05 18_[-1(1.55e-09)]_61 chrXIII:878556-881132 2.70e-01 100 chrVII:319228-320141 3.34e-01 100 chrXII:855251-857604 4.34e-01 100 chrVIII:381374-383477 9.61e-02 100 chrXI:21315-21788 2.51e-04 13_[+3(2.61e-06)]_58 chrVII:436715-438290 8.68e-01 100 chrVIII:505813-506221 8.06e-01 100 chrXII:1012063-1012486 5.57e-02 4_[-1(5.19e-05)]_75 chrXIII:372172-372666 1.08e-01 100 chrXIV:374669-375199 4.83e-04 46_[+1(5.83e-08)]_33 chrXIV:738674-740139 7.82e-01 100 chrVII:533715-535199 8.57e-01 100 chrXVI:785640-786089 8.47e-01 100 chrXIII:251858-252976 7.82e-01 100 chrIX:248618-249446 3.15e-01 100 chrXV:758974-759599 2.56e-01 100 chrXIII:362941-363415 1.61e-03 24_[-3(2.47e-07)]_47 chrVII:989762-990438 9.93e-01 100 chrXII:198313-199713 5.30e-01 100 chrX:540868-540968 3.67e-01 100 chrVII:291688-291991 1.98e-02 38_[-3(8.60e-06)]_33 chrXVI:340339-340965 9.18e-02 100 chrVII:149718-149967 3.21e-01 100 chrII:36234-36849 8.02e-05 4_[+3(2.61e-06)]_27_[-2(5.14e-05)]_\ 11 chrXII:962765-963293 5.29e-12 [-1(4.82e-08)]_26_[+2(3.53e-11)]_24 chrXII:262794-264589 4.10e-02 100 chrXI:302667-303234 4.04e-04 17_[-2(5.05e-07)]_54 chrV:435611-436021 4.45e-04 29_[+2(9.24e-08)]_42 chrIV:1233321-1234283 7.70e-01 100 chrVII:405466-405922 3.11e-02 44_[+3(7.84e-05)]_27 chrXIII:498976-501356 7.18e-01 100 chrXIV:241390-241789 1.92e-01 100 chrXIII:253180-253775 2.75e-01 100 chrXII:712230-713586 6.79e-01 100 chrVIII:74782-76425 3.36e-01 100 chrXI:379692-380093 1.34e-01 100 chrIII:149463-150222 3.32e-01 100 chrXIII:168234-169057 9.12e-01 100 chrXVI:378662-378994 2.85e-01 100 chrV:461156-462397 1.30e-01 100 chrXII:645290-646293 2.40e-04 5_[+3(8.55e-07)]_1_[+3(4.54e-08)]_\ 36 chrIV:1359157-1361290 4.72e-01 100 chrXII:423722-425265 3.35e-01 100 chrVII:422886-423593 1.34e-01 100 chrXVI:572022-572750 1.66e-04 61_[+3(3.34e-08)]_10 chrVII:147923-149545 5.99e-01 100 chrIII:57442-59131 5.67e-01 100 chrVII:914781-915283 9.35e-01 100 chrXII:628143-628687 1.17e-05 17_[-2(7.19e-10)]_54 chrII:87845-88590 7.02e-01 100 chrXIII:90909-92128 3.14e-01 100 chrXV:1005495-1006065 3.64e-01 100 chrVIII:148953-149315 7.04e-01 100 chrVII:345831-346656 2.49e-01 100 chrXI:312414-314034 2.29e-01 100 chrXVI:66956-67508 1.57e-01 100 chrIV:434053-435022 8.00e-02 62_[+3(3.42e-05)]_9 chrXV:287822-288559 5.68e-01 100 chrVII:828414-828991 1.82e-04 78_[-1(1.58e-08)]_1 chrIII:168091-168542 6.38e-06 42_[-1(1.35e-09)]_37 chrXII:728297-729744 2.21e-01 100 chrXVI:818604-819839 5.43e-01 100 chrX:90031-90131 1.34e-03 19_[-3(1.44e-07)]_52 chrVII:260-953 4.42e-01 100 chrXII:299765-301305 7.07e-01 100 chrXVI:645167-646158 3.30e-03 21_[+1(9.30e-07)]_58 chrIII:82153-83568 9.94e-02 100 chrII:197247-197837 6.31e-15 1_[-2(4.78e-13)]_16_[+1(7.60e-10)]_\ 33 chrIII:77839-78925 1.29e-01 100 chrVIII:174628-175715 7.69e-01 100 chrXVI:927779-928127 3.60e-01 100 chrIV:216555-218079 6.68e-02 100 chrXV:252829-255104 8.86e-01 100 chrXIII:300868-303527 1.94e-01 100 chrIX:388110-389068 3.96e-01 100 chrVII:19764-20959 1.72e-01 100 chrI:81853-82318 3.00e-01 100 chrV:249768-250743 9.98e-01 100 chrIV:975884-977245 5.11e-01 100 chrXV:710124-710677 6.83e-03 40_[-1(7.52e-05)]_39 chrXIII:162969-164610 4.54e-01 100 chrIX:385314-387383 9.98e-03 54_[-3(5.33e-06)]_17 chrXV:594308-594658 8.63e-01 100 chrVII:876170-876761 1.60e-07 22_[+1(1.02e-09)]_57 chrXIII:797854-798237 7.02e-02 100 chrVIII:410936-411712 6.72e-01 100 chrXVI:880067-880570 1.28e-09 5_[-3(1.36e-06)]_1_[-1(7.60e-10)]_\ 44 chrVI:101122-101553 2.64e-02 40_[+3(4.33e-05)]_31 chrVII:736181-736902 5.14e-02 59_[-3(2.09e-05)]_12 chrXVI:66618-66797 9.06e-01 100 chrXIV:65950-66221 1.36e-01 100 chrXV:967985-968662 8.23e-01 100 chrXI:99019-102385 2.59e-03 20_[+2(5.05e-07)]_51 chrVII:794207-794559 8.98e-01 100 chrX:702859-702959 2.18e-02 13_[+2(7.16e-05)]_58 chrXII:793677-797516 5.90e-01 100 chrXII:521912-522431 5.78e-02 21_[+3(3.70e-05)]_50 chrXVI:794452-796029 4.00e-01 100 chrXIII:837726-838244 1.00e-04 52_[+1(1.00e-07)]_27 chrXIV:575165-575823 9.92e-01 100 chrIX:138000-139245 6.10e-04 42_[-3(5.97e-07)]_29 chrVII:765953-766817 7.98e-01 100 chrXII:167749-168242 1.53e-10 6_[-1(7.00e-08)]_24_[+2(3.41e-10)]_\ 20 chrXII:11254-11494 2.37e-01 100 chrV:469248-469658 2.01e-06 53_[-2(2.01e-10)]_18 chrXII:231943-234275 5.09e-01 100 chrXV:837230-837431 5.71e-01 100 chrX:745037-745137 1.55e-01 100 chrIX:68247-68994 9.50e-01 100 chrVII:730585-730748 3.60e-02 16_[-3(1.13e-05)]_55 chrXI:141696-143762 1.89e-01 100 chrIV:229432-231159 7.75e-01 100 chrIV:519656-520127 4.54e-04 55_[+3(3.90e-08)]_16 chrIV:132215-133598 5.30e-01 100 chrVIII:114156-116403 7.02e-01 100 chrXIII:731451-733594 5.68e-01 100 chrXIII:258998-259383 9.96e-11 25_[-1(7.00e-08)]_24_[+2(3.41e-10)]_\ 1 chrII:680359-682393 9.75e-02 69_[+2(7.64e-05)]_2 chrV:487204-487593 8.61e-01 100 chrVII:785388-785783 7.36e-01 100 chrX:390774-390874 7.23e-09 1_[-3(3.34e-08)]_29_[-1(4.82e-08)]_\ 20 chrIV:464804-466122 4.76e-03 12_[+3(1.69e-06)]_59 chrIV:218301-218724 1.17e-01 100 chrI:69874-70438 4.19e-07 68_[-3(2.11e-09)]_3 chrXIII:463345-463925 5.00e-04 11_[+1(5.30e-08)]_68 chrVII:254118-254732 2.83e-03 1_[+3(2.90e-06)]_70 chrIII:67556-68693 1.85e-01 100 chrXIII:267648-268867 8.28e-01 100 chrXII:673499-675141 9.75e-01 100 chrXIII:225298-226625 2.93e-01 100 chrVIII:400962-401405 1.20e-01 100 chrXI:108686-110446 8.95e-01 100 chrXV:281942-282545 2.56e-08 12_[+1(6.07e-11)]_67 chrX:525856-525956 6.47e-01 100 chrXV:300913-301501 2.54e-07 12_[+1(5.65e-09)]_67 chrXII:86881-87403 7.27e-01 100 chrXIV:392316-392743 5.85e-01 100 chrVIII:388631-389003 2.52e-01 100 chrXIV:662932-665555 4.07e-02 100 chrII:642855-643262 1.59e-08 6_[-1(1.09e-07)]_14_[+2(2.54e-08)]_\ 30 chrXIV:585362-586590 3.65e-01 100 chrX:663378-663478 5.39e-01 100 chrVII:255185-255698 4.35e-03 66_[+3(2.90e-06)]_5 chrII:88932-90123 2.69e-01 100 chrXVI:828743-829440 7.93e-01 100 chrVI:226297-226974 1.32e-03 21_[-3(1.44e-07)]_50 chrVIII:451163-453052 1.19e-01 100 chrI:180940-181527 1.39e-03 61_[+3(1.13e-05)]_10 chrIX:186502-188022 1.26e-03 4_[+3(4.67e-07)]_67 chrXI:382147-382511 5.39e-02 100 chrV:130783-131397 7.70e-06 49_[-1(1.35e-09)]_30 chrV:260237-262038 4.84e-01 100 chrXII:809047-814215 5.20e-01 100 chrXII:731300-732328 5.64e-01 100 chrIV:220963-222379 8.42e-01 100 chrIII:66-1038 3.85e-03 41_[+2(2.02e-06)]_30 chrXII:366041-366554 8.07e-01 100 chrII:326557-327139 5.59e-11 1_[-1(7.60e-10)]_16_[+2(7.03e-09)]_\ 33 chrVIII:358240-358765 1.71e-04 33_[-1(5.83e-08)]_46 chrXV:226442-226889 1.55e-11 3_[-1(6.07e-11)]_13_[+2(2.54e-08)]_\ 34 chrXI:158206-159747 1.11e-01 100 chrVIII:475476-475908 1.91e-06 71_[-1(8.87e-11)]_8 chrV:430965-432192 5.62e-01 100 chrIV:992683-993183 8.03e-01 100 chrXIV:107013-107492 6.78e-01 100 chrXIII:352086-352639 1.94e-07 29_[+1(5.83e-08)]_12_[+3(9.61e-07)]_\ 9 chrXIV:632400-632900 7.92e-06 7_[-2(2.99e-05)]_7_[+1(1.29e-07)]_\ 36 chrVII:784630-785188 7.38e-02 37_[-3(3.16e-05)]_34 chrXII:329391-329631 1.69e-02 3_[-3(1.62e-05)]_68 chrVII:185186-185939 3.92e-02 58_[-3(1.92e-05)]_13 chrX:607264-607364 2.14e-01 100 chrIV:1352298-1353441 5.62e-01 100 chrXIV:715383-716634 4.82e-01 100 chrXVI:575817-576517 8.97e-01 100 chrII:408366-409203 9.50e-01 100 chrXVI:519993-520827 8.63e-01 100 chrV:77488-79900 4.33e-01 100 chrXV:444598-446178 3.90e-01 100 chrXIII:183787-183972 2.75e-07 76_[-1(6.07e-11)]_3 chrVI:220778-222058 1.57e-01 100 chrXVI:431733-434391 1.54e-01 100 chrVI:157845-158413 8.48e-01 100 chrXV:438381-438974 2.88e-04 15_[-2(3.88e-08)]_56 chrXIII:872574-872952 8.96e-02 100 chrV:396192-396565 6.85e-01 100 chrXVI:678560-679903 9.16e-02 100 chrXVI:134555-134707 1.19e-02 42_[+3(3.22e-06)]_29 chrVI:167258-167725 1.00e-04 55_[+1(1.00e-07)]_24 chrXIV:104607-105114 2.87e-04 38_[+1(6.39e-08)]_41 chrVII:364018-364432 9.68e-05 7_[-3(1.07e-08)]_64 chrXII:932096-932536 4.42e-02 45_[-3(1.76e-05)]_26 chrVII:531409-532186 6.29e-01 100 chrIX:370220-370696 2.22e-05 51_[+1(1.55e-09)]_28 chrIX:126935-128797 6.51e-01 100 chrXV:1003891-1005281 4.95e-03 29_[+3(1.69e-06)]_42 chrVII:786989-788767 9.29e-01 100 chrXV:908423-909056 3.98e-01 100 chrIV:930648-931426 8.03e-01 100 chrVII:276986-278733 5.38e-01 100 chrXIII:433488-433793 4.09e-01 100 chrVII:726380-728198 9.12e-01 100 chrXIII:747697-748143 1.77e-08 29_[-1(1.58e-08)]_14_[+2(1.90e-07)]_\ 7 chrV:174736-174996 1.07e-01 100 chrIV:234178-235603 1.80e-01 100 chrII:350595-351138 6.55e-07 53_[+1(1.35e-09)]_26 chrXI:74419-74817 3.43e-06 55_[-2(4.40e-10)]_16 chrII:9366-9890 5.29e-12 4_[-2(3.53e-11)]_26_[+1(4.82e-08)]_\ 20 chrXV:619148-623661 8.78e-01 100 chrVII:541709-542166 2.82e-07 5_[+1(1.55e-09)]_28_[-3(3.42e-05)]_\ 17 chrXVI:775607-776071 2.50e-04 18_[+2(2.54e-08)]_53 chrVIII:466654-467291 4.83e-05 67_[-2(3.12e-09)]_4 chrIII:123341-123813 1.76e-09 57_[-1(1.12e-13)]_22 chrXI:230890-231739 8.53e-02 100 chrXII:59-219 3.96e-03 38_[-3(9.61e-07)]_33 chrIII:315608-316594 4.62e-01 100 chrXII:734566-735429 9.10e-01 100 chrV:66938-69611 8.45e-01 100 chrVII:23365-23566 6.46e-01 100 chrX:227751-227851 1.86e-01 100 chrXVI:768943-769499 4.16e-05 43_[-1(5.65e-09)]_36 chrXVI:425078-425949 2.29e-01 100 chrXII:88204-88446 1.86e-02 4_[+3(4.83e-06)]_67 chrXIII:306065-307157 1.07e-01 100 chrXV:677801-679146 7.81e-01 100 chrV:362086-362494 5.81e-01 100 chrVII:205304-206479 3.20e-01 100 chrXVI:172877-174106 5.58e-01 100 chrXIII:320950-321334 2.21e-05 62_[-1(1.58e-08)]_17 chrVII:930782-931689 2.29e-01 100 chrVI:162007-162377 6.87e-01 100 chrII:544510-545120 1.93e-01 100 chrIV:1305392-1305928 1.70e-10 19_[-2(3.41e-10)]_25_[+1(7.00e-08)]_\ 6 chrXVI:699847-700667 1.16e-03 37_[+1(5.37e-05)]_7_[+3(2.28e-05)]_\ 6 chrIV:385186-387797 9.31e-02 3_[-1(5.02e-05)]_76 chrXII:1028112-1028585 1.19e-03 27_[+3(7.60e-07)]_44 chrXIII:555814-558230 7.01e-03 8_[+3(1.89e-06)]_63 chrX:233693-233793 5.68e-08 6_[-2(8.12e-07)]_15_[+1(1.13e-08)]_\ 29 chrIV:322181-323618 4.33e-03 26_[-3(1.36e-06)]_45 chrVII:823342-823717 4.59e-12 2_[-2(2.01e-10)]_16_[+1(1.78e-09)]_\ 32 chrVII:877656-879030 2.02e-01 100 chrXIV:351506-352968 1.97e-03 46_[-3(5.29e-07)]_25 chrXIII:650735-652965 8.82e-02 100 chrXII:253119-255254 5.34e-01 100 chrXIV:525067-525294 8.67e-01 100 chrXV:228063-228594 8.42e-06 52_[-2(4.40e-10)]_19 chrXII:805402-807154 1.38e-01 100 chrVII:427624-427919 8.13e-01 100 chrXII:897684-899691 9.16e-01 100 chrVII:848656-848970 7.98e-01 100 chrX:517644-517744 1.58e-07 1_[-1(1.89e-06)]_14_[+2(1.64e-08)]_\ 35 chrXI:617617-619290 8.52e-01 100 chrIII:90858-91137 5.58e-02 100 chrIV:619704-620227 3.34e-04 61_[-1(6.39e-08)]_18 chrIX:382035-382416 2.35e-01 100 chrV:207362-207887 1.89e-02 7_[-3(4.33e-05)]_64 chrI:138956-139354 5.53e-06 46_[-2(5.77e-09)]_25 chrVII:110316-110786 3.91e-01 100 chrIX:182920-183105 2.15e-01 100 chrIV:884246-884616 6.76e-01 100 chrIII:295320-296045 6.85e-01 100 chrII:266189-266690 8.15e-05 32_[+1(6.39e-08)]_47 chrIV:1162422-1165742 6.76e-01 100 chrV:422764-425314 8.35e-01 100 chrXVI:74967-76747 5.28e-01 100 chrII:301126-301640 1.97e-01 100 chrIV:1013419-1013966 5.38e-02 70_[+3(2.47e-05)]_1 chrV:135134-136170 8.24e-01 100 chrXII:924268-925086 1.98e-01 100 chrXI:518660-521152 7.16e-03 55_[-2(5.68e-05)]_16 chrIV:83434-83828 5.68e-10 8_[+1(6.07e-11)]_15_[+3(1.36e-06)]_\ 27 chrXI:430726-431642 3.36e-01 100 chrXIII:754451-754881 9.05e-01 100 chrXI:248264-248711 8.81e-01 100 chrXIII:540323-540911 2.89e-01 100 chrVII:1003993-1004431 1.70e-05 53_[-2(3.12e-09)]_18 chrXVI:296996-297558 6.07e-02 100 chrII:226972-227344 2.87e-04 19_[+1(7.00e-08)]_60 chrXV:79720-80129 2.95e-01 100 chrXIV:217238-217729 7.12e-04 [+3(5.97e-07)]_71 chrXII:367975-371716 1.00e-01 100 chrXI:307876-308420 1.16e-05 53_[-1(1.78e-09)]_26 chrIV:578874-580896 5.28e-02 100 chrIX:83940-85178 6.58e-02 100 chrIV:129887-131009 4.66e-03 47_[+3(3.95e-06)]_24 chrVII:438569-439992 3.80e-01 100 chrXII:449141-450490 1.15e-01 52_[-2(7.89e-05)]_19 chrXIV:355432-355742 5.40e-01 100 chrXVI:404513-408144 1.35e-01 100 chrI:68279-68929 2.99e-03 57_[-3(4.83e-06)]_14 chrXII:65311-65737 5.19e-01 100 chrXVI:55759-56430 1.72e-01 100 chrXV:423750-425504 3.83e-01 100 chrVI:191300-191786 2.19e-04 27_[-1(4.15e-07)]_52 chrXV:216277-216736 1.71e-01 100 chrXIV:546555-547593 2.15e-05 69_[-2(5.77e-09)]_2 chrV:442998-443382 1.39e-07 69_[-1(7.60e-10)]_10 chrXI:219716-220141 3.26e-11 16_[-2(2.01e-10)]_15_[+1(1.58e-08)]_\ 19 chrXV:832217-832847 4.41e-01 100 chrIV:538848-539591 2.37e-01 100 chrXIV:102570-103211 6.25e-04 36_[+3(9.46e-08)]_35 chrXV:987077-989627 4.03e-01 100 chrXII:710537-710897 1.88e-03 35_[-3(9.44e-06)]_36 chrXV:110842-111209 1.81e-01 100 chrIV:411079-411668 2.02e-01 100 chrVII:397865-400168 2.60e-02 68_[+3(8.60e-06)]_3 chrXIV:88881-90251 4.32e-01 100 chrXIII:653544-654156 9.93e-01 100 chrXII:818498-819757 9.30e-01 100 chrXV:639094-639487 5.80e-01 100 chrXVI:718327-719661 2.42e-02 25_[-3(1.36e-05)]_46 chrIII:142118-143005 9.05e-04 53_[-3(2.47e-07)]_18 chrXII:727902-728125 6.19e-01 100 chrXIV:631551-632134 5.70e-10 61_[-1(1.12e-13)]_18 chrVII:323456-324880 1.37e-02 67_[+3(1.04e-05)]_4 chrX:542773-542873 4.89e-01 100 chrV:434388-435157 1.17e-01 100 chrV:53526-53980 1.66e-01 100 chrXV:866550-868323 1.20e-01 100 chrVIII:103554-105564 1.05e-01 100 chrXV:520321-520902 1.82e-01 100 chrXI:490713-491378 4.19e-06 16_[+1(6.39e-08)]_17_[+3(3.16e-05)]_\ 17 chrVII:440248-441025 3.20e-01 100 chrXV:391023-391975 5.41e-01 100 chrXIII:219239-221149 8.48e-01 100 chrX:523850-523950 9.07e-01 100 chrXV:504978-505498 2.18e-01 100 chrIV:946140-946640 9.15e-05 31_[+1(1.00e-07)]_48 chrVII:876965-877152 1.20e-01 100 chrXIII:378893-379631 3.54e-01 100 chrIV:644873-645379 1.68e-02 22_[-3(8.42e-05)]_49 chrXVI:338583-339433 1.27e-01 100 chrIV:1201473-1202130 4.74e-08 42_[+1(1.02e-09)]_37 chrXVI:209986-210737 7.69e-01 100 chrVII:483224-483812 6.45e-03 17_[+1(9.90e-07)]_62 chrIV:550876-551471 9.07e-01 100 chrIII:162113-164257 9.86e-04 25_[-3(1.25e-07)]_46 chrX:607895-607995 4.07e-03 48_[+3(4.83e-06)]_23 chrVI:95417-95949 1.83e-01 100 chrVIII:48135-48674 6.52e-02 70_[-3(5.86e-05)]_1 chrXII:97397-97878 3.70e-01 100 chrIV:568580-569355 5.30e-07 7_[+1(1.58e-08)]_72 chrIX:98118-100057 9.99e-01 100 chrXII:426915-427473 5.79e-04 30_[+1(5.30e-08)]_49 chrXIII:388277-388668 8.47e-02 13_[+1(4.10e-05)]_66 chrVII:771868-772296 3.47e-04 13_[+3(6.12e-08)]_11_[+3(2.91e-05)]_\ 18 chrXV:274459-274997 5.74e-06 2_[-2(4.12e-06)]_35_[+1(4.15e-07)]_\ 13 chrXII:214645-215064 3.70e-04 56_[-3(7.09e-08)]_15 chrIV:1354442-1356089 5.45e-01 100 chrXIII:586383-586891 3.71e-06 56_[-1(1.78e-09)]_23 chrVII:706281-707187 4.78e-01 100 chrXII:875095-875643 1.71e-04 56_[-2(3.88e-08)]_15 chrIII:13968-17347 5.09e-01 100 chrXI:513105-513626 1.98e-05 24_[-1(5.30e-08)]_55 chrVII:364910-366716 6.57e-01 100 chrIX:299972-300507 5.14e-07 46_[-1(1.02e-09)]_33 chrII:159824-160044 5.39e-01 100 chrXVI:810577-811128 2.45e-01 100 chrXII:605131-605993 8.45e-01 100 chrIII:176788-178838 8.75e-01 100 chrX:617702-617802 7.58e-02 53_[+1(4.85e-05)]_26 chrIV:1434396-1434917 9.47e-01 100 chrV:99901-100436 1.67e-07 14_[-2(1.64e-08)]_14_[+1(1.89e-06)]_\ 22 chrVIII:455028-456438 8.32e-02 100 chrXIV:568051-568629 8.46e-03 16_[-3(3.22e-06)]_55 chrVII:730937-731458 7.53e-04 34_[+1(1.29e-07)]_45 chrXV:881905-882453 6.57e-01 100 chrVII:661516-661953 2.07e-05 64_[-2(3.12e-09)]_7 chrX:195015-195115 7.69e-01 100 chrXV:353884-354305 8.36e-10 4_[-1(6.39e-08)]_15_[+2(1.81e-09)]_\ 31 chrV:117476-118320 2.35e-01 100 chrX:378228-378328 4.57e-12 19_[-2(2.01e-10)]_16_[+1(1.78e-09)]_\ 15 chrI:71781-73683 8.07e-01 100 chrVI:222913-225941 8.65e-02 100 chrIX:183278-183726 1.56e-08 32_[+2(4.78e-13)]_39 chrXV:571702-572235 2.03e-01 100 chrXII:903402-903719 5.10e-03 39_[+3(9.03e-05)]_32 chrXII:373696-374717 3.55e-02 100 chrXII:567553-568865 3.83e-01 100 chrXIV:518823-519131 7.22e-02 100 chrXII:780493-781882 9.27e-01 100 chrXIV:725872-726337 2.02e-02 60_[-3(9.44e-06)]_11 chrX:531542-531642 5.68e-10 10_[+1(6.07e-11)]_1_[+3(2.90e-06)]_\ 39 chrVII:986618-987642 8.67e-01 100 chrXV:925155-925432 4.78e-01 100 chrVII:426648-427433 8.63e-01 100 chrXIII:807789-808557 5.97e-04 34_[+3(6.12e-08)]_37 chrIV:721768-722146 4.11e-01 100 chrXI:578751-579354 3.35e-05 29_[+1(5.65e-09)]_50 chrXIV:330780-331092 9.82e-01 100 chrXII:636478-640223 1.15e-01 6_[+1(5.94e-05)]_73 chrXIV:198241-198504 2.98e-03 16_[+3(2.90e-06)]_55 chrVIII:119655-122700 4.20e-01 100 chrVII:779394-779952 3.69e-08 35_[+1(1.35e-09)]_13_[+3(7.12e-06)]_\ 2 chrXI:46546-47024 6.80e-10 7_[-1(6.36e-09)]_14_[+2(1.36e-08)]_\ 29 chrIV:125328-125696 1.14e-01 100 chrIV:599005-601496 1.82e-01 100 chrVII:1000274-1000627 3.35e-01 100 chrXIV:416435-418121 9.99e-01 100 chrII:405568-406356 5.30e-07 8_[+1(1.58e-08)]_71 chrVII:370392-371572 2.37e-01 100 chrII:167546-169708 9.74e-01 100 chrVIII:214164-214348 7.91e-03 41_[+3(1.62e-05)]_30 chrXVI:866490-866712 3.18e-01 100 chrVII:959287-960006 8.56e-01 100 chrVIII:47770-47953 4.80e-01 100 chrXV:487431-487735 8.39e-01 100 chrXV:901427-901801 4.83e-01 100 chrXII:687636-687911 6.60e-01 100 chrV:321208-323318 1.24e-01 41_[-2(7.89e-05)]_30 chrXV:231909-232482 8.36e-02 100 chrXIV:87341-87857 6.24e-01 100 chrIV:1449765-1451514 5.03e-01 100 chrIV:340184-341955 6.09e-02 100 chrII:473852-474362 4.46e-01 100 chrIV:116399-117914 6.31e-02 100 chrXI:202172-203310 3.36e-01 100 chrVII:648768-649393 1.70e-03 53_[-3(5.29e-07)]_18 chrI:141527-143638 6.26e-01 100 chrXV:671008-671552 8.62e-01 100 chrIV:1362077-1362639 3.49e-01 100 chrVII:738885-739600 2.87e-01 100 chrXV:113474-113882 9.21e-03 71_[-3(1.24e-05)] chrXII:784116-784712 1.50e-03 60_[+1(4.15e-07)]_19 chrVII:702844-704579 3.86e-03 21_[-3(1.89e-06)]_50 chrIV:1401246-1403451 3.42e-01 100 chrIV:488416-489176 1.52e-05 58_[-1(7.60e-10)]_21 chrVII:938992-939754 7.15e-01 100 chrXVI:39972-41071 3.41e-01 100 chrXIV:619693-620118 6.91e-01 100 chrVII:310461-312444 6.89e-01 100 chrVII:774114-774721 3.49e-05 25_[+1(1.58e-08)]_54 chrXIII:660936-662523 9.62e-01 100 chrXV:161016-161928 1.31e-01 100 chrXVI:502526-503286 5.47e-01 100 chrXIII:480376-480828 4.31e-06 76_[-1(1.02e-09)]_3 chrXII:656830-657209 1.99e-06 8_[+2(2.01e-10)]_63 chrXIV:442807-444842 9.06e-01 100 chrVIII:62542-62924 5.57e-01 100 chrXIV:602108-602583 6.79e-15 16_[-2(4.78e-13)]_16_[+1(7.60e-10)]_\ 18 chrXII:83918-84421 9.86e-01 100 chrXIII:296671-298918 5.16e-01 100 chrV:225434-225728 1.14e-03 20_[-3(2.81e-07)]_7_[-3(4.33e-05)]_\ 15 chrXIII:751303-752032 1.75e-02 54_[-3(5.33e-06)]_17 chrXVI:744084-744596 3.08e-04 36_[+1(9.30e-07)]_43 chrXII:837599-839408 3.46e-01 100 chrIV:1300060-1301327 2.22e-01 100 chrXIII:116958-119902 5.68e-02 32_[+3(3.70e-05)]_39 chrV:138431-141936 5.28e-01 100 chrVII:700206-701298 2.02e-05 25_[+1(8.05e-09)]_54 chrX:157439-157539 4.04e-02 51_[+3(3.70e-05)]_20 chrXII:1017674-1019426 7.66e-01 100 chrX:122780-122880 6.08e-01 100 chrXVI:640909-641789 7.49e-01 100 chrII:59492-61334 9.91e-01 100 chrXII:498280-499741 6.86e-01 100 chrXIII:131543-132109 7.20e-06 56_[-1(1.58e-08)]_23 chrII:415507-416124 9.84e-04 [+3(1.09e-07)]_71 chrXVI:302627-304645 4.10e-03 77_[+1(9.23e-06)]_2 chrII:477038-477766 2.88e-01 100 chrXIII:768166-768449 7.88e-01 100 chrVII:561275-561721 9.64e-02 100 chrXVI:559937-560293 3.86e-02 64_[+3(2.09e-05)]_7 chrII:44946-45366 5.79e-04 16_[-3(1.65e-07)]_55 chrX:415709-415809 2.16e-04 14_[-1(7.67e-08)]_65 chrXVI:689346-689872 3.97e-10 5_[-2(1.53e-10)]_24_[+1(9.30e-07)]_\ 21 chrV:490748-491948 9.68e-02 48_[-3(9.68e-05)]_23 chrXV:853983-854865 9.88e-02 100 chrXIV:493659-495750 3.68e-01 100 chrVIII:134084-135057 9.76e-01 100 chrII:181315-181638 7.38e-01 100 chrIV:980732-981217 1.13e-07 7_[-3(6.74e-07)]_21_[-1(7.00e-08)]_\ 22 chrIV:321614-321950 6.28e-02 43_[+3(5.04e-05)]_28 chrII:504522-504742 7.99e-01 100 chrXI:67681-69046 4.02e-01 100 chrXV:663468-664101 2.60e-01 100 chrV:441790-442655 8.29e-01 100 chrXI:558662-559488 4.50e-01 100 chrXVI:435540-436198 2.54e-01 100 chrVII:122057-122877 4.31e-01 100 chrXI:257782-260115 2.34e-03 69_[+3(3.63e-07)]_2 chrXI:333691-335014 2.55e-03 5_[-3(2.61e-06)]_66 chrVIII:296628-297285 3.24e-01 100 chrVIII:145780-146491 2.25e-02 10_[+3(4.83e-06)]_61 chrXIV:783518-784325 3.16e-02 100 chrXI:517156-518305 9.81e-01 100 chrII:444660-445297 6.20e-01 100 chrIV:1079939-1081043 6.54e-01 100 chrX:538016-538116 5.30e-01 100 chrXVI:188438-188963 2.69e-01 100 chrXII:201658-202824 4.09e-02 100 chrVIII:16556-18324 8.41e-03 68_[+3(7.12e-06)]_3 chrVII:609282-611482 5.98e-04 70_[+3(6.12e-08)]_1 chrXIV:301466-302300 6.15e-02 100 chrX:414759-414859 1.44e-07 40_[+1(1.02e-09)]_39 chrXI:364351-365289 7.90e-02 100 chrIV:9-344 2.41e-02 100 chrIII:29533-31178 9.32e-01 100 chrII:332279-333016 6.51e-01 100 chrX:354017-354117 3.22e-04 78_[+1(1.00e-07)]_1 chrXV:446772-447343 5.44e-01 100 chrVIII:125899-126317 9.84e-02 70_[+3(7.84e-05)]_1 chrV:363642-364505 3.50e-01 100 chrX:73384-73484 7.02e-01 100 chrXVI:242406-243360 4.97e-01 100 chrII:644936-645452 2.49e-05 65_[+1(1.55e-09)]_14 chrII:555760-558148 9.62e-01 100 chrVII:597846-601458 7.40e-01 100 chrXV:836400-837067 6.33e-02 100 chrXII:459626-460683 8.56e-03 [+3(1.24e-05)]_71 chrXIV:96012-96529 1.12e-06 28_[-1(1.35e-09)]_51 chrVIII:34378-36275 2.80e-01 100 chrV:438494-438993 4.32e-12 6_[-2(2.01e-10)]_16_[+1(1.78e-09)]_\ 28 chrXII:1051904-1052222 1.58e-06 65_[-1(7.60e-10)]_14 chrXI:83962-84470 2.34e-06 41_[-2(6.37e-10)]_30 chrXIII:352879-353155 1.58e-01 100 chrIV:1256785-1257290 2.10e-10 28_[-1(1.35e-12)]_14_[+2(6.93e-05)]_\ 8 chrXIII:572666-573192 1.33e-08 11_[-1(4.82e-08)]_15_[+2(4.21e-08)]_\ 24 chrVII:856675-857648 2.76e-01 100 chrVII:411832-412586 3.55e-01 100 chrXVI:731624-732302 2.33e-01 100 chrXII:975775-976190 3.36e-04 58_[-1(1.29e-07)]_21 chrIV:437553-438106 5.73e-06 45_[+1(7.00e-08)]_34 chrX:204543-204643 5.80e-04 33_[+1(5.30e-08)]_46 chrIV:1150680-1151206 2.07e-07 19_[+2(2.63e-10)]_52 chrXV:312333-313338 2.28e-01 100 chrV:60979-62158 1.56e-01 100 chrIV:1488395-1490803 1.26e-01 100 chrV:551019-551577 3.00e-06 44_[-1(7.60e-10)]_35 chrIV:416394-417259 1.57e-03 26_[-3(5.97e-07)]_45 chrIX:427244-427791 6.63e-01 100 chrXVI:856720-857425 1.49e-05 27_[+3(2.44e-08)]_44 chrIX:197310-197795 9.26e-01 100 chrXIV:61537-64556 3.33e-01 100 chrIV:490545-491264 1.39e-03 15_[-3(1.44e-07)]_56 chrXV:977065-981352 5.94e-01 100 chrXI:463042-463897 8.44e-01 100 chrXIV:498951-500865 3.91e-01 100 chrXIII:549895-553445 6.30e-01 100 chrXI:355289-356620 7.99e-01 100 chrXIII:504912-505255 1.54e-03 59_[-3(3.56e-06)]_12 chrV:354687-355389 9.06e-01 100 chrIV:667703-668214 6.31e-01 100 chrXII:404066-404740 8.75e-01 100 chrXIV:569618-570160 2.25e-06 35_[-1(7.60e-10)]_44 chrXV:339560-340780 2.22e-01 100 chrXV:770026-770573 7.42e-01 100 chrIV:835706-836383 2.91e-01 100 chrX:424277-424377 1.05e-07 39_[+2(3.53e-11)]_32 chrVI:30279-32410 7.14e-01 100 chrIX:174875-175374 5.89e-04 [+1(6.39e-08)]_79 chrXIII:290456-291199 2.44e-05 66_[+1(1.55e-09)]_13 chrIII:127572-127902 4.83e-10 28_[-2(4.40e-10)]_16_[+1(1.29e-07)]_\ 6 chrX:651194-651294 1.11e-01 100 chrIX:257357-258656 5.12e-01 100 chrXIV:560249-560867 9.48e-01 100 chrIV:1095137-1095673 5.43e-05 22_[-1(5.83e-08)]_57 chrX:348792-348892 2.05e-02 22_[-3(3.42e-05)]_49 chrV:85037-86955 5.37e-01 100 chrX:115559-115659 3.19e-01 100 chrXIV:418276-418497 6.30e-03 3_[+3(1.89e-06)]_34_[+3(9.68e-05)]_\ 5 chrX:391793-391893 1.70e-01 100 chrXV:514329-514742 5.92e-01 100 chrVII:845363-845961 8.94e-12 36_[-2(2.54e-08)]_13_[+1(6.07e-11)]_\ 1 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************