******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/AWRI1631--PHD1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrII:375956-376298 1.0000 100 chrVIII:173440-176216 1.0000 100 chrXV:24364-24625 1.0000 100 chrVII:148009-148638 1.0000 100 chrXI:307887-308415 1.0000 100 chrI:166173-166586 1.0000 100 chrIV:1278574-1279871 1.0000 100 chrXVI:828779-829482 1.0000 100 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chrVII:426933-427703 1.0000 100 chrIII:137821-139366 1.0000 100 chrII:326560-327103 1.0000 100 chrIV:591710-592118 1.0000 100 chrXIII:309684-310081 1.0000 100 chrXVI:701874-702326 1.0000 100 chrXII:656834-657204 1.0000 100 chrVII:576412-577196 1.0000 100 chrXIV:351659-353050 1.0000 100 chrXV:638890-639490 1.0000 100 chrI:190004-192163 1.0000 100 chrXIII:131601-132065 1.0000 100 chrXV:663556-664123 1.0000 100 chrXII:628201-628720 1.0000 100 chrXIV:392286-393004 1.0000 100 chrXV:903799-904847 1.0000 100 chrVIII:358291-358776 1.0000 100 chrVII:20322-20760 1.0000 100 chrXIII:320969-321327 1.0000 100 chrVII:531406-531816 1.0000 100 chrIV:321641-321964 1.0000 100 chrXII:440474-441677 1.0000 100 chrIII:299060-299385 1.0000 100 chrXII:1017670-1019403 1.0000 100 chrXII:374211-374724 1.0000 100 chrIV:1359205-1361204 1.0000 100 chrXI:381601-382481 1.0000 100 chrIX:177520-178241 1.0000 100 chrXIV:575094-576496 1.0000 100 chrXIII:305936-307404 1.0000 100 chrXV:881218-882453 1.0000 100 chrXIV:576672-577569 1.0000 100 chrXIV:662988-664067 1.0000 100 chrIV:129918-130992 1.0000 100 chrXII:92345-92717 1.0000 100 chrXIII:267274-268320 1.0000 100 chrV:77348-79986 1.0000 100 chrXII:515300-516932 1.0000 100 chrXIV:198244-199466 1.0000 100 chrXV:677372-679175 1.0000 100 chrV:23375-23870 1.0000 100 chrVIII:145458-146458 1.0000 100 chrVIII:374639-376051 1.0000 100 chrVII:227250-228715 1.0000 100 chrIV:546082-546411 1.0000 100 chrX:354047-354147 1.0000 100 chrXV:80355-81501 1.0000 100 chrXVI:649092-649946 1.0000 100 chrV:235364-237145 1.0000 100 chrXII:796360-796847 1.0000 100 chrXII:108169-108988 1.0000 100 chrXI:334067-334978 1.0000 100 chrVII:440497-440963 1.0000 100 chrVII:555172-557478 1.0000 100 chrXIV:783421-784325 1.0000 100 chrVII:319250-320132 1.0000 100 chrXV:836287-836981 1.0000 100 chrIV:519658-519960 1.0000 100 chrIX:388187-388817 1.0000 100 chrVII:938985-939736 1.0000 100 chrVII:648759-649357 1.0000 100 chrXIII:758977-759600 1.0000 100 chrIII:67-1050 1.0000 100 chrIV:1233475-1234103 1.0000 100 chrXI:379698-381411 1.0000 100 chrXII:369626-371396 1.0000 100 chrXIII:872400-872955 1.0000 100 chrXVI:66778-67509 1.0000 100 chrVI:19361-19900 1.0000 100 chrV:174607-175082 1.0000 100 chrXVI:108803-114966 1.0000 100 chrX:540973-541073 1.0000 100 chrIX:127494-130245 1.0000 100 chrXV:990150-990320 1.0000 100 chrV:99908-100338 1.0000 100 chrVII:968766-969412 1.0000 100 chrVII:702771-703945 1.0000 100 chrXIV:518829-519136 1.0000 100 chrXI:578767-579323 1.0000 100 chrVIII:114907-115683 1.0000 100 chrIV:1175620-1176065 1.0000 100 chrXII:167760-168210 1.0000 100 chrXII:837595-839776 1.0000 100 chrXV:670842-671694 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/AWRI1631--PHD1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/AWRI1631--PHD1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/AWRI1631--PHD1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.295 C 0.205 G 0.205 T 0.295 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/AWRI1631--PHD1/background): A 0.300 C 0.200 G 0.200 T 0.300 ******************************************************************************** ******************************************************************************** MOTIF MBSGGRATCGAACCSVKGAYCTYCN MEME-1 width = 25 sites = 65 llr = 1130 E-value = 1.3e-193 ******************************************************************************** -------------------------------------------------------------------------------- Motif MBSGGRATCGAACCSVKGAYCTYCN MEME-1 Description -------------------------------------------------------------------------------- Simplified A 3::2:55:::aa:113:27:1:122 pos.-specific C 644:::1:8:::a8541::673454 probability G 1457a52::a::::34571:111:2 matrix T :3:1::2a2::::21:3:2416422 bits 2.3 * * 2.1 * * * 1.9 * * * 1.6 * * **** Relative 1.4 * ****** Entropy 1.2 * ******* * * (25.1 bits) 0.9 *** ******* * * 0.7 ****** ******** ****** 0.5 ****** ***************** 0.2 ****** ****************** 0.0 ------------------------- Multilevel CCGGGAATCGAACCCCGGACCTCCC consensus AGCA GT T GGTATT CTAG sequence T A TA T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MBSGGRATCGAACCSVKGAYCTYCN MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------- chrIII:123316-123809 + 73 2.13e-14 GTGGGGCGAG CCGGGACTCGAACCCGGGACCTCCC GCA chrXIV:569648-570165 + 19 7.85e-12 AATGGTCTCT AGCGGGATCGAACCGCTGATCCCCG CGTTATTAGC chrV:443049-443376 + 48 7.85e-12 TATGGTCTCT AGCGGGATCGAACCGCTGATCCCCG CGTTATTAGC chrII:197261-197834 - 38 7.85e-12 AATGGTCTCT AGCGGGATCGAACCGCTGATCCCCG CGTTATTAGC chrXII:1051918-1052215 + 63 7.85e-12 AATGGTCTCT AGCGGGATCGAACCGCTGATCCCCG CGTTATTAGC chrIX:370220-370720 - 36 8.86e-11 TACTCCGATA CGGGGAGTCGAACCCCGGTCTCCAC GGTGAAAGCG chrVII:541714-542144 - 10 8.86e-11 CACTCCGATA CGGGGAGTCGAACCCCGGTCTCCAC GGTGAAAGC chrV:487114-487572 + 46 8.86e-11 TACTCCGATA CGGGGAGTCGAACCCCGGTCTCCAC GGTGAAAGCG chrXV:853661-854766 + 32 1.02e-10 ATTGGACGCA ACCGGAATCGAACCGATGACCTCTT CCTTGCAAGG chrIV:1075272-1075735 + 27 1.18e-10 AATGTTCCAA CCGAGGATCGAACTCGGGACCTTTG CCGTGTGAAG chrIV:645028-645365 + 15 1.36e-10 AAAGGTCCTA CCCGGATTCGAACCGGGGTTGTCCG GATCAAAACC chrVIII:133963-134770 - 44 1.36e-10 AAAGGTCCTA CCCGGATTCGAACCGGGGTTGTCCG GATCAAAACC chrIII:168152-168515 + 26 1.36e-10 AAAGGTCCTA CCCGGATTCGAACCGGGGTTGTCCG GATCAAAACC chrII:350605-351080 - 74 1.36e-10 TA CCCGGATTCGAACCGGGGTTGTCCG GATCAAAACC chrII:326560-327103 + 19 2.06e-10 TTTGATCCAA CCGAGGTTCGAACTCGGGATCTTCG CCGTGTAAAG chrV:130844-131350 + 43 2.36e-10 ATAGGTCTTA CCCGGATTCGAACCGGGGTTGTTCG GATCAAAACC chrXIV:96018-96512 + 34 3.08e-10 TTTGAGCGGT ACGAGAATCGAACCCGTGTCCCCAC CTTGGAAGGG chrVII:779393-779930 - 44 3.08e-10 CTTGAGCGGT ACGAGAATCGAACCCGTGTCCCCAC CTTGGAAGGG chrXV:464291-464827 - 10 3.50e-10 AAGGGGCGAG CTGGGAATTGAACCCAGGGCCTCTC GCATGCTTT chrV:435614-435990 + 8 3.99e-10 GCCCTGT AGGGGGCTCGAACCCCTAACCTTAT GATTAAGAGT chrIII:151116-151551 + 9 3.99e-10 AGCCCTGT AGGGGGCTCGAACCCCTAACCTTAT GATTAAGAGT chrX:414820-414920 - 51 3.99e-10 TTAGCCCTGT AGGGGGCTCGAACCCCTAACCTTAT GATTAAGAGT chrXI:578767-579323 - 33 5.14e-10 AACTCCTCAT AGGGGGCTCGAACCCCTGACATTTC GGTATCCTTG chrX:396611-396711 + 6 5.14e-10 GCAAG CCCGGAATCGAACCGGGGGCCCAAC GATGGCAACG chrXV:226443-226870 + 13 5.14e-10 TTTGCGCAAG CCCGGAATCGAACCGGGGGCCCAAC GATGGCAACG chrXVI:860166-860738 - 15 5.14e-10 TCTGCGCAAG CCCGGAATCGAACCGGGGGCCCAAC GATGGCAACG chrVII:115334-115720 - 74 5.14e-10 AT AGGGGGCTCGAACCCCTGACATTTC GGTATCCTTG chrXVI:768989-769467 + 37 5.14e-10 AACTCCTCAT AGGGGGCTCGAACCCCTGACATTTC GGTATCCTTG chrXIII:131601-132065 + 50 7.44e-10 AGCACTCACG ATGGGGGTCGAACCCATAATCTTCT GATTAGAAGT chrXIII:747744-748143 + 7 7.44e-10 CTCACG ATGGGGGTCGAACCCATAATCTTCT GATTAGAAGT chrXI:162242-162724 + 62 7.44e-10 AACACTCACG ATGGGGGTCGAACCCATAATCTTCT GATTAGAAGT chrII:405675-406232 - 14 7.44e-10 AGCACTCACG ATGGGGGTCGAACCCATAATCTTCT GATTAGAAGT chrVII:736198-736627 - 17 7.44e-10 AACACTCACG ATGGGGGTCGAACCCATAATCTTCT GATTAGAAGT chrXV:663556-664123 + 31 9.47e-10 AATGATTTCG CCCAGGATCGAACTGGGGACGTTCT GCGTGTTAAG chrXIII:586442-586916 + 15 9.47e-10 AATGATTTCG CCCAGGATCGAACTGGGGACGTTCT GCGTGTTAAG chrXI:307887-308415 + 51 9.47e-10 ATTGATTTCG CCCAGGATCGAACTGGGGACGTTCT GCGTGTTAAG chrVII:440497-440963 + 44 2.12e-09 TATGCGAATT CTGTGGATCGAACACAGGACCTCCA GATAACTTGA chrVIII:358291-358776 + 3 2.12e-09 TT CTGTGGATCGAACACAGGACCTCCA GATAACTTGA chrIV:1095140-1095632 + 42 2.12e-09 AATGCGAACT CTGTGGATCGAACACAGGACCTCCA GATATCTTGA chrII:36258-36644 - 55 2.12e-09 AATGCGAATT CTGTGGATCGAACACAGGACCTCCA GATGACTTGA chrXIV:104617-105109 - 32 2.36e-09 TATGCTTCCA ATCGGATTTGAACCGATGATCTCCA CATTACTAGT chrII:266220-266669 - 24 2.36e-09 AATGCTTCCA ATCGGATTTGAACCGATGATCTCCA CATTACTAGT chrXIII:320969-321327 + 57 8.21e-09 AATGGACGAG TCCGGAATCGAACCGGAGACCTCTC CCATGCTAAG chrIV:568708-569287 - 56 2.50e-08 TTCTCCGTGA CGGGGAATTGAACCCCGATCTGGCA CGCGACAAGC chrX:204555-204655 - 11 2.50e-08 ATCTCCGCGA CGGGGAATTGAACCCCGATCTGGCA CGCGACAAGC chrXII:426932-427425 - 43 2.50e-08 TTCTCCGCGA CGGGGAATTGAACCCCGATCTGGCA CGCGACAAGC chrXI:513057-513596 + 64 2.50e-08 ATCTCCGCGA CGGGGAATTGAACCCCGATCTGGCA CGCGACAAGC chrX:355195-355295 - 68 2.50e-08 CTCCGCGA CGGGGAATTGAACCCCGATCTGGCA CGCGACAAGC chrV:492200-492546 + 37 4.54e-08 TCCTTCCCCG CCAGGACTTGAACCTGGAATCTTCT GGTTCGTAGC chrIV:519658-519960 + 42 7.95e-08 CGGTTGTCCG CGCGAGTTCGAACCTCGCATCCTTC AATAACTTAT chrII:9385-9953 + 22 7.95e-08 CGGTTGTCCG CGCGAGTTCGAACCTCGCATCCTTC AGTATTTTTT chrX:424250-424350 - 10 7.95e-08 CGGTTGTCCG CGCGAGTTCGAACCTCGCATCCTTC AGTATTTTT chrXI:302701-303245 - 68 1.16e-07 TGAAACGG ACAGGAATTGAACCTGCAACCCTTC GATTGCAATC chrX:415739-415839 + 9 1.16e-07 TGAAACGG ACAGGAATTGAACCTGCAACCCTTC GATTGCAATC chrX:517652-517752 + 2 1.56e-07 G CTCGGTTTCGATCCGAGGACATCAG GGTTATGAGC chrIII:149714-150189 - 58 1.56e-07 AATAGCGCCG CTCGGTTTCGATCCGAGGACATCAG GGTTATGAGC chrVI:167251-167707 - 64 1.80e-07 TATCTCCCGG GGGCGAGTCGAACGCCCGATCTCAA GATTTCGTAG chrIV:946158-946644 - 17 1.80e-07 AATCTCCCGG GGGCGAGTCGAACGCCCGATCTCAA GATTTCGTAG chrVIII:466811-467329 - 9 2.38e-07 AATGCCACCT GCCAGAATTGAACTAGCGACCTTTG CATTACAA chrVII:730975-731429 - 26 2.54e-07 AACGACCCCA GTGAGGGTTGAACTCACGATCTTGC GATTAACAGT chrXIV:632436-632879 - 33 2.54e-07 AACGACCCCA GTGAGGGTTGAACTCACGATCTTGC GATTAACAGT chrII:642815-643242 + 37 4.04e-07 GAAGCTCGCA CTCAGGATCGAACTAAGGACCAACA GATTTGCAAT chrXVI:744110-744544 - 46 5.19e-07 TTTGCCACCT GTCAGAATTGAACTAACGACCTTTG CATTACAAGT chrXIII:362939-363329 - 19 9.96e-07 AATGCCATCT CCTAGAATCGAACCAGGGTTTCATC GGCCACAACG chrVII:483248-483744 - 36 1.31e-06 TGAAAACAAA CCCGGTCTCGAAGCGGAGATCCGGC GATAATTACC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MBSGGRATCGAACCSVKGAYCTYCN MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:123316-123809 2.1e-14 72_[+1]_3 chrXIV:569648-570165 7.8e-12 18_[+1]_57 chrV:443049-443376 7.8e-12 47_[+1]_28 chrII:197261-197834 7.8e-12 37_[-1]_38 chrXII:1051918-1052215 7.8e-12 62_[+1]_13 chrIX:370220-370720 8.9e-11 35_[-1]_40 chrVII:541714-542144 8.9e-11 9_[-1]_66 chrV:487114-487572 8.9e-11 45_[+1]_30 chrXV:853661-854766 1e-10 31_[+1]_44 chrIV:1075272-1075735 1.2e-10 26_[+1]_49 chrIV:645028-645365 1.4e-10 14_[+1]_61 chrVIII:133963-134770 1.4e-10 43_[-1]_32 chrIII:168152-168515 1.4e-10 25_[+1]_50 chrII:350605-351080 1.4e-10 73_[-1]_2 chrII:326560-327103 2.1e-10 18_[+1]_57 chrV:130844-131350 2.4e-10 42_[+1]_33 chrXIV:96018-96512 3.1e-10 33_[+1]_42 chrVII:779393-779930 3.1e-10 43_[-1]_32 chrXV:464291-464827 3.5e-10 9_[-1]_66 chrV:435614-435990 4e-10 7_[+1]_68 chrIII:151116-151551 4e-10 8_[+1]_67 chrX:414820-414920 4e-10 50_[-1]_25 chrXI:578767-579323 5.1e-10 32_[-1]_43 chrX:396611-396711 5.1e-10 5_[+1]_70 chrXV:226443-226870 5.1e-10 12_[+1]_63 chrXVI:860166-860738 5.1e-10 14_[-1]_61 chrVII:115334-115720 5.1e-10 73_[-1]_2 chrXVI:768989-769467 5.1e-10 36_[+1]_39 chrXIII:131601-132065 7.4e-10 49_[+1]_26 chrXIII:747744-748143 7.4e-10 6_[+1]_69 chrXI:162242-162724 7.4e-10 61_[+1]_14 chrII:405675-406232 7.4e-10 13_[-1]_62 chrVII:736198-736627 7.4e-10 16_[-1]_59 chrXV:663556-664123 9.5e-10 30_[+1]_45 chrXIII:586442-586916 9.5e-10 14_[+1]_61 chrXI:307887-308415 9.5e-10 50_[+1]_25 chrVII:440497-440963 2.1e-09 43_[+1]_32 chrVIII:358291-358776 2.1e-09 2_[+1]_73 chrIV:1095140-1095632 2.1e-09 41_[+1]_34 chrII:36258-36644 2.1e-09 54_[-1]_21 chrXIV:104617-105109 2.4e-09 31_[-1]_44 chrII:266220-266669 2.4e-09 23_[-1]_52 chrXIII:320969-321327 8.2e-09 56_[+1]_19 chrIV:568708-569287 2.5e-08 55_[-1]_20 chrX:204555-204655 2.5e-08 10_[-1]_65 chrXII:426932-427425 2.5e-08 42_[-1]_33 chrXI:513057-513596 2.5e-08 63_[+1]_12 chrX:355195-355295 2.5e-08 67_[-1]_8 chrV:492200-492546 4.5e-08 36_[+1]_39 chrIV:519658-519960 8e-08 41_[+1]_34 chrII:9385-9953 8e-08 21_[+1]_54 chrX:424250-424350 8e-08 9_[-1]_66 chrXI:302701-303245 1.2e-07 67_[-1]_8 chrX:415739-415839 1.2e-07 8_[+1]_67 chrX:517652-517752 1.6e-07 1_[+1]_74 chrIII:149714-150189 1.6e-07 57_[-1]_18 chrVI:167251-167707 1.8e-07 63_[-1]_12 chrIV:946158-946644 1.8e-07 16_[-1]_59 chrVIII:466811-467329 2.4e-07 8_[-1]_67 chrVII:730975-731429 2.5e-07 25_[-1]_50 chrXIV:632436-632879 2.5e-07 32_[-1]_43 chrII:642815-643242 4e-07 36_[+1]_39 chrXVI:744110-744544 5.2e-07 45_[-1]_30 chrXIII:362939-363329 1e-06 18_[-1]_57 chrVII:483248-483744 1.3e-06 35_[-1]_40 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MBSGGRATCGAACCSVKGAYCTYCN MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF MBSGGRATCGAACCSVKGAYCTYCN width=25 seqs=65 chrIII:123316-123809 ( 73) CCGGGACTCGAACCCGGGACCTCCC 1 chrXIV:569648-570165 ( 19) AGCGGGATCGAACCGCTGATCCCCG 1 chrV:443049-443376 ( 48) AGCGGGATCGAACCGCTGATCCCCG 1 chrII:197261-197834 ( 38) AGCGGGATCGAACCGCTGATCCCCG 1 chrXII:1051918-1052215 ( 63) AGCGGGATCGAACCGCTGATCCCCG 1 chrIX:370220-370720 ( 36) CGGGGAGTCGAACCCCGGTCTCCAC 1 chrVII:541714-542144 ( 10) CGGGGAGTCGAACCCCGGTCTCCAC 1 chrV:487114-487572 ( 46) CGGGGAGTCGAACCCCGGTCTCCAC 1 chrXV:853661-854766 ( 32) ACCGGAATCGAACCGATGACCTCTT 1 chrIV:1075272-1075735 ( 27) CCGAGGATCGAACTCGGGACCTTTG 1 chrIV:645028-645365 ( 15) CCCGGATTCGAACCGGGGTTGTCCG 1 chrVIII:133963-134770 ( 44) CCCGGATTCGAACCGGGGTTGTCCG 1 chrIII:168152-168515 ( 26) CCCGGATTCGAACCGGGGTTGTCCG 1 chrII:350605-351080 ( 74) CCCGGATTCGAACCGGGGTTGTCCG 1 chrII:326560-327103 ( 19) CCGAGGTTCGAACTCGGGATCTTCG 1 chrV:130844-131350 ( 43) CCCGGATTCGAACCGGGGTTGTTCG 1 chrXIV:96018-96512 ( 34) ACGAGAATCGAACCCGTGTCCCCAC 1 chrVII:779393-779930 ( 44) ACGAGAATCGAACCCGTGTCCCCAC 1 chrXV:464291-464827 ( 10) CTGGGAATTGAACCCAGGGCCTCTC 1 chrV:435614-435990 ( 8) AGGGGGCTCGAACCCCTAACCTTAT 1 chrIII:151116-151551 ( 9) AGGGGGCTCGAACCCCTAACCTTAT 1 chrX:414820-414920 ( 51) AGGGGGCTCGAACCCCTAACCTTAT 1 chrXI:578767-579323 ( 33) AGGGGGCTCGAACCCCTGACATTTC 1 chrX:396611-396711 ( 6) CCCGGAATCGAACCGGGGGCCCAAC 1 chrXV:226443-226870 ( 13) CCCGGAATCGAACCGGGGGCCCAAC 1 chrXVI:860166-860738 ( 15) CCCGGAATCGAACCGGGGGCCCAAC 1 chrVII:115334-115720 ( 74) AGGGGGCTCGAACCCCTGACATTTC 1 chrXVI:768989-769467 ( 37) AGGGGGCTCGAACCCCTGACATTTC 1 chrXIII:131601-132065 ( 50) ATGGGGGTCGAACCCATAATCTTCT 1 chrXIII:747744-748143 ( 7) ATGGGGGTCGAACCCATAATCTTCT 1 chrXI:162242-162724 ( 62) ATGGGGGTCGAACCCATAATCTTCT 1 chrII:405675-406232 ( 14) ATGGGGGTCGAACCCATAATCTTCT 1 chrVII:736198-736627 ( 17) ATGGGGGTCGAACCCATAATCTTCT 1 chrXV:663556-664123 ( 31) CCCAGGATCGAACTGGGGACGTTCT 1 chrXIII:586442-586916 ( 15) CCCAGGATCGAACTGGGGACGTTCT 1 chrXI:307887-308415 ( 51) CCCAGGATCGAACTGGGGACGTTCT 1 chrVII:440497-440963 ( 44) CTGTGGATCGAACACAGGACCTCCA 1 chrVIII:358291-358776 ( 3) CTGTGGATCGAACACAGGACCTCCA 1 chrIV:1095140-1095632 ( 42) CTGTGGATCGAACACAGGACCTCCA 1 chrII:36258-36644 ( 55) CTGTGGATCGAACACAGGACCTCCA 1 chrXIV:104617-105109 ( 32) ATCGGATTTGAACCGATGATCTCCA 1 chrII:266220-266669 ( 24) ATCGGATTTGAACCGATGATCTCCA 1 chrXIII:320969-321327 ( 57) TCCGGAATCGAACCGGAGACCTCTC 1 chrIV:568708-569287 ( 56) CGGGGAATTGAACCCCGATCTGGCA 1 chrX:204555-204655 ( 11) CGGGGAATTGAACCCCGATCTGGCA 1 chrXII:426932-427425 ( 43) CGGGGAATTGAACCCCGATCTGGCA 1 chrXI:513057-513596 ( 64) CGGGGAATTGAACCCCGATCTGGCA 1 chrX:355195-355295 ( 68) CGGGGAATTGAACCCCGATCTGGCA 1 chrV:492200-492546 ( 37) CCAGGACTTGAACCTGGAATCTTCT 1 chrIV:519658-519960 ( 42) CGCGAGTTCGAACCTCGCATCCTTC 1 chrII:9385-9953 ( 22) CGCGAGTTCGAACCTCGCATCCTTC 1 chrX:424250-424350 ( 10) CGCGAGTTCGAACCTCGCATCCTTC 1 chrXI:302701-303245 ( 68) ACAGGAATTGAACCTGCAACCCTTC 1 chrX:415739-415839 ( 9) ACAGGAATTGAACCTGCAACCCTTC 1 chrX:517652-517752 ( 2) CTCGGTTTCGATCCGAGGACATCAG 1 chrIII:149714-150189 ( 58) CTCGGTTTCGATCCGAGGACATCAG 1 chrVI:167251-167707 ( 64) GGGCGAGTCGAACGCCCGATCTCAA 1 chrIV:946158-946644 ( 17) GGGCGAGTCGAACGCCCGATCTCAA 1 chrVIII:466811-467329 ( 9) GCCAGAATTGAACTAGCGACCTTTG 1 chrVII:730975-731429 ( 26) GTGAGGGTTGAACTCACGATCTTGC 1 chrXIV:632436-632879 ( 33) GTGAGGGTTGAACTCACGATCTTGC 1 chrII:642815-643242 ( 37) CTCAGGATCGAACTAAGGACCAACA 1 chrXVI:744110-744544 ( 46) GTCAGAATTGAACTAACGACCTTTG 1 chrXIII:362939-363329 ( 19) CCTAGAATCGAACCAGGGTTTCATC 1 chrVII:483248-483744 ( 36) CCCGGTCTCGAAGCGGAGATCCGGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MBSGGRATCGAACCSVKGAYCTYCN MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 25 n= 45600 bayes= 10.205 E= 1.3e-193 17 147 -111 -428 -1267 89 82 -12 -270 111 135 -428 -59 -270 182 -229 -270 -1267 226 -1267 71 -1267 121 -270 67 -53 -11 -59 -1267 -1267 -1267 174 -1267 194 -1267 -38 -1267 -1267 232 -1267 174 -1267 -1267 -1267 169 -1267 -1267 -328 -1267 230 -370 -1267 -229 192 -270 -96 -229 135 76 -170 -4 82 82 -1267 -328 -70 143 4 -29 -211 182 -1267 121 -1267 -170 -29 -1267 155 -1267 47 -196 173 -70 -112 -428 55 -138 104 -196 106 -111 47 -38 130 -211 -38 -48 82 21 -59 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MBSGGRATCGAACCSVKGAYCTYCN MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 25 nsites= 65 E= 1.3e-193 0.338462 0.553846 0.092308 0.015385 0.000000 0.369231 0.353846 0.276923 0.046154 0.430769 0.507692 0.015385 0.200000 0.030769 0.707692 0.061538 0.046154 0.000000 0.953846 0.000000 0.492308 0.000000 0.461538 0.046154 0.476923 0.138462 0.184615 0.200000 0.000000 0.000000 0.000000 1.000000 0.000000 0.769231 0.000000 0.230769 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.969231 0.000000 0.000000 0.030769 0.000000 0.984615 0.015385 0.000000 0.061538 0.753846 0.030769 0.153846 0.061538 0.507692 0.338462 0.092308 0.292308 0.353846 0.353846 0.000000 0.030769 0.123077 0.538462 0.307692 0.246154 0.046154 0.707692 0.000000 0.692308 0.000000 0.061538 0.246154 0.000000 0.584615 0.000000 0.415385 0.076923 0.661538 0.123077 0.138462 0.015385 0.292308 0.076923 0.615385 0.076923 0.415385 0.092308 0.415385 0.230769 0.492308 0.046154 0.230769 0.215385 0.353846 0.230769 0.200000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MBSGGRATCGAACCSVKGAYCTYCN MEME-1 regular expression -------------------------------------------------------------------------------- [CA][CGT][GC][GA]G[AG][AT]T[CT]GAACC[CG][CGA][GT][GA][AT][CT]C[TC][CT][CAT][CGAT] -------------------------------------------------------------------------------- Time 353.05 secs. ******************************************************************************** ******************************************************************************** MOTIF TWACCACTRVRCYAHVNVVSC MEME-2 width = 21 sites = 59 llr = 830 E-value = 5.1e-094 ******************************************************************************** -------------------------------------------------------------------------------- Motif TWACCACTRVRCYAHVNVVSC MEME-2 Description -------------------------------------------------------------------------------- Simplified A 256:2a::534::a42323:2 pos.-specific C 2:3a7:7:13:a7:3323358 probability G :2::1:::346::::33444: matrix T 631:::3a::::3:31211:1 bits 2.3 * * 2.1 * * 1.9 * * 1.6 * * * * * Relative 1.4 * *** * * * Entropy 1.2 * *** **** * (20.3 bits) 0.9 ***** **** ** 0.7 ****** **** ** 0.5 * ************ ** 0.2 **************** **** 0.0 --------------------- Multilevel TAACCACTAGGCCAAGAGGCC consensus ATC T GAA T CCGCAG sequence C TACAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWACCACTRVRCYAHVNVVSC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXIV:96018-96512 + 77 3.57e-09 GGTGGGATGA TAACCACTACACTAACCGCCC ATG chrVII:779393-779930 - 5 3.57e-09 GGTGGGATGA TAACCACTACACTAACCGCCC GGGG chrXII:656834-657204 + 17 9.96e-09 GGGAGCGCGC TACCGACTACGCCACACGCCC AATTTTCTTG chrXII:92345-92717 - 67 1.36e-08 AGCGAGAATC ATACCACTAGACCACACGCCC TTATTAACTT chrXIV:546563-547709 - 8 1.36e-08 AGCGAGAATC ATACCACTAGACCACACGCCC GATTATT chrVI:101172-101561 - 60 1.36e-08 AGCGAGAATC ATACCACTAGACCACACGCCC GAATTATTGT chrIV:645028-645365 + 58 1.83e-08 CCGAAAGTGA TAACCACTACACTATAGGACC GTAACAACTG chrVIII:133963-134770 - 5 1.83e-08 CCGAAAGTGA TAACCACTACACTATAGGACC GGAA chrVII:794214-794561 - 80 1.83e-08 . TACCAACTGCGCCATGTGCCC GCAATCTATG chrII:642815-643242 + 80 1.83e-08 ATCTGCTGCG CTACCACTGCGCCATACGAGC chrIII:168152-168515 + 69 1.83e-08 CCGAAAGTGA TAACCACTACACTATAGGACC AGGACTTCTT chrXIII:808082-808535 + 39 1.83e-08 CCGAAAGTGA TAACCACTACACTATAGGACC TTTTTCTTCT chrXV:853661-854766 + 76 1.83e-08 GGAAGCGCGC TACCAACTGCGCCATGTGCCC TGAT chrXII:167760-168210 + 70 2.44e-08 TCTTTCGCCT TAACCACTCGGCCAAGTTGCC ATATGACTAT chrIV:437555-438082 - 4 2.44e-08 TCTTTCGCCT TAACCACTCGGCCAAGTTGCC TTA chrX:523776-523876 + 13 2.44e-08 TCTTTCGCCT TAACCACTCGGCCAAGTTGCC TTTAATCTCT chrXVI:744110-744544 - 7 3.66e-08 GTGCAACGCT CTACCACTAAGCTAAGGAGGC TTTTAC chrVII:1003981-1004421 - 65 3.66e-08 GTGCAACGCT CTACCACTAAGCTAAGGAGGC AAACCCTTGA chrVII:661506-661993 - 50 3.66e-08 GTGCAACGCT CTACCACTAAGCTAAGGAGGC AAATTTTTAC chrXIV:569648-570165 + 64 4.16e-08 ACGGTGCCTT AACCAACTGGGCCAAGAGACC ACTGTTATCT chrIX:183286-183718 + 41 4.16e-08 ACGGTGCCTT AACCAACTGGGCCAAGAGACC AGGAATTTGT chrXII:734629-734985 - 45 4.16e-08 ACGGTGCCTT AACCAACTGGGCCAAGAGACC AAACTTTGTT chrX:396611-396711 + 48 4.73e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC TTACTTTTGA chrVII:930860-931167 + 40 4.73e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC TCACTGATTA chrXV:226443-226870 + 55 4.73e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC TGAATTTCTT chrVI:162046-162373 - 69 4.73e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC TTGTTTTCTT chrII:350605-351080 - 35 6.84e-08 CCGAAAGTGA TAACCACTACACTATAAAACC CTTTTATTGA chrIV:1201522-1201996 - 41 7.70e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC TATTTATTTG chrV:435614-435990 + 52 7.70e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC TCTTATTGTT chrIII:151116-151551 + 53 7.70e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC TCTTTAATTA chrX:414820-414920 - 11 7.70e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC TAATTCGTTG chrX:424250-424350 + 72 9.70e-08 CTGCCGCCTT AGACCACTCGGCCAACCCTCC ATCTTATT chrXI:83970-84420 - 63 9.70e-08 CTGCCGCATT AGACCACTCGGCCAACCCTCC ATACAAATTT chrXII:962832-963298 + 20 9.70e-08 CTGCCGCCTT AGACCACTCGGCCAACCCTCC GTCGATAATA chrIV:1150724-1151124 + 47 1.35e-07 GGCATCGCCT TAACCACTCGGCCACTGGGAC TGAAACACTT chrXV:663556-664123 + 76 1.50e-07 CAGATGCCAT AACCGACTAGACCACGAAACC ACTA chrXIII:586442-586916 + 60 1.50e-07 CAGATGCCAT AACCGACTAGACCACGAAACC ATAGTAAGTT chrV:469276-469663 - 38 1.50e-07 CAGATGCCAT AACCGACTAGACCACGAAACC AATTATTTCT chrXII:592328-592839 + 66 1.67e-07 CTGACGCCTT AAACCACTCGGCCAAACTCCC ATTGTATGTT chrXIII:747744-748143 + 50 3.62e-07 GTCAGACGCG TTGCCATTACGCCACGCGAGC TAGTCATATG chrII:326560-327103 + 64 4.33e-07 GCGACGTCTT GAACCACTGGACCATTGGACC CGGAACTCGA chrVII:531406-531816 - 49 6.61e-07 GCGCCCATTC TGACCATTAAACTATCACGGA AGTAACTCGA chrVII:544412-544900 + 22 6.61e-07 GCGCCCATTC TGACCATTAAACTATCACGGA AGAAATATCT chrX:233741-233841 - 46 6.61e-07 CCAGACGCCG TGACCATTGGGCCACGAGGAA CAAGAATATA chrIV:568708-569287 - 17 6.61e-07 GCGCCCATTC TGACCATTAAACTATCACGGA AGAAACAAAG chrII:405675-406232 - 57 6.61e-07 GCGCCCATTC TGACCATTAAACTATCACGGA AGAAACAAAG chrXV:571726-572136 - 77 6.61e-07 TTC TGACCATTAAACTATCACGGA TTTTAATTGT chrXII:426932-427425 - 4 6.61e-07 GCGCCCATTC TGACCATTAAACTATCACGGA TAA chrVII:115334-115720 - 11 6.61e-07 CCGAACGCTC TACCAACTGAGCTAACAAGGA TGAGTTCTTC chrX:355195-355295 - 29 6.61e-07 GCGCCCATTC TGACCATTAAACTATCACGGA AGAAACAAAG chrV:99908-100338 - 60 9.06e-07 GCCCTGCGCG CTTCCACTGCGCCACGGCGCT TAGCCAACTT chrX:517652-517752 + 45 9.06e-07 GCCCTGCGCG CTTCCACTGCGCCACGGCGCT TAACTTTTAT chrIII:149714-150189 - 19 9.06e-07 GCCCTGCGCG CTTCCACTGCGCCACGGCGCT CAACATTACA chrXV:353917-354304 + 33 1.05e-06 TGTGGCGCCT TACCAACTTGGCCATAGAAGC AGTAAACCGT chrXIV:374628-375126 - 42 1.05e-06 TCTGGCGCTC TCCCAACTGAGCTAAGTCCGC TTATTTTTCT chrX:58993-59093 + 4 1.05e-06 CCT TACCAACTTGGCCATAGAAGC TTCTATTTTA chrVIII:358291-358776 + 66 1.73e-06 TCTGGCGCTC TCCCAACTGAGCTAAATCCGC TTACTATTTG chrVII:878498-879115 + 39 1.97e-06 GTCGAAAGCT CTACCATTGAGCCACCGCTTC ATCTTGAAAT chrVII:287166-287680 + 62 1.97e-06 GTCGAAAGCT CTACCATTGAGCCACCGCTTC ATCTTGAAAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWACCACTRVRCYAHVNVVSC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:96018-96512 3.6e-09 76_[+2]_3 chrVII:779393-779930 3.6e-09 4_[-2]_75 chrXII:656834-657204 1e-08 16_[+2]_63 chrXII:92345-92717 1.4e-08 66_[-2]_13 chrXIV:546563-547709 1.4e-08 7_[-2]_72 chrVI:101172-101561 1.4e-08 59_[-2]_20 chrIV:645028-645365 1.8e-08 57_[+2]_22 chrVIII:133963-134770 1.8e-08 4_[-2]_75 chrVII:794214-794561 1.8e-08 79_[-2] chrII:642815-643242 1.8e-08 79_[+2] chrIII:168152-168515 1.8e-08 68_[+2]_11 chrXIII:808082-808535 1.8e-08 38_[+2]_41 chrXV:853661-854766 1.8e-08 75_[+2]_4 chrXII:167760-168210 2.4e-08 69_[+2]_10 chrIV:437555-438082 2.4e-08 3_[-2]_76 chrX:523776-523876 2.4e-08 12_[+2]_67 chrXVI:744110-744544 3.7e-08 6_[-2]_73 chrVII:1003981-1004421 3.7e-08 64_[-2]_15 chrVII:661506-661993 3.7e-08 49_[-2]_30 chrXIV:569648-570165 4.2e-08 63_[+2]_16 chrIX:183286-183718 4.2e-08 40_[+2]_39 chrXII:734629-734985 4.2e-08 44_[-2]_35 chrX:396611-396711 4.7e-08 47_[+2]_32 chrVII:930860-931167 4.7e-08 39_[+2]_40 chrXV:226443-226870 4.7e-08 54_[+2]_25 chrVI:162046-162373 4.7e-08 68_[-2]_11 chrII:350605-351080 6.8e-08 34_[-2]_45 chrIV:1201522-1201996 7.7e-08 40_[-2]_39 chrV:435614-435990 7.7e-08 51_[+2]_28 chrIII:151116-151551 7.7e-08 52_[+2]_27 chrX:414820-414920 7.7e-08 10_[-2]_69 chrX:424250-424350 9.7e-08 71_[+2]_8 chrXI:83970-84420 9.7e-08 62_[-2]_17 chrXII:962832-963298 9.7e-08 19_[+2]_60 chrIV:1150724-1151124 1.3e-07 46_[+2]_33 chrXV:663556-664123 1.5e-07 75_[+2]_4 chrXIII:586442-586916 1.5e-07 59_[+2]_20 chrV:469276-469663 1.5e-07 37_[-2]_42 chrXII:592328-592839 1.7e-07 65_[+2]_14 chrXIII:747744-748143 3.6e-07 49_[+2]_30 chrII:326560-327103 4.3e-07 63_[+2]_16 chrVII:531406-531816 6.6e-07 48_[-2]_31 chrVII:544412-544900 6.6e-07 21_[+2]_58 chrX:233741-233841 6.6e-07 45_[-2]_34 chrIV:568708-569287 6.6e-07 16_[-2]_63 chrII:405675-406232 6.6e-07 56_[-2]_23 chrXV:571726-572136 6.6e-07 76_[-2]_3 chrXII:426932-427425 6.6e-07 3_[-2]_76 chrVII:115334-115720 6.6e-07 10_[-2]_69 chrX:355195-355295 6.6e-07 28_[-2]_51 chrV:99908-100338 9.1e-07 59_[-2]_20 chrX:517652-517752 9.1e-07 44_[+2]_35 chrIII:149714-150189 9.1e-07 18_[-2]_61 chrXV:353917-354304 1.1e-06 32_[+2]_47 chrXIV:374628-375126 1.1e-06 41_[-2]_38 chrX:58993-59093 1.1e-06 3_[+2]_76 chrVIII:358291-358776 1.7e-06 65_[+2]_14 chrVII:878498-879115 2e-06 38_[+2]_41 chrVII:287166-287680 2e-06 61_[+2]_18 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWACCACTRVRCYAHVNVVSC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TWACCACTRVRCYAHVNVVSC width=21 seqs=59 chrXIV:96018-96512 ( 77) TAACCACTACACTAACCGCCC 1 chrVII:779393-779930 ( 5) TAACCACTACACTAACCGCCC 1 chrXII:656834-657204 ( 17) TACCGACTACGCCACACGCCC 1 chrXII:92345-92717 ( 67) ATACCACTAGACCACACGCCC 1 chrXIV:546563-547709 ( 8) ATACCACTAGACCACACGCCC 1 chrVI:101172-101561 ( 60) ATACCACTAGACCACACGCCC 1 chrIV:645028-645365 ( 58) TAACCACTACACTATAGGACC 1 chrVIII:133963-134770 ( 5) TAACCACTACACTATAGGACC 1 chrVII:794214-794561 ( 80) TACCAACTGCGCCATGTGCCC 1 chrII:642815-643242 ( 80) CTACCACTGCGCCATACGAGC 1 chrIII:168152-168515 ( 69) TAACCACTACACTATAGGACC 1 chrXIII:808082-808535 ( 39) TAACCACTACACTATAGGACC 1 chrXV:853661-854766 ( 76) TACCAACTGCGCCATGTGCCC 1 chrXII:167760-168210 ( 70) TAACCACTCGGCCAAGTTGCC 1 chrIV:437555-438082 ( 4) TAACCACTCGGCCAAGTTGCC 1 chrX:523776-523876 ( 13) TAACCACTCGGCCAAGTTGCC 1 chrXVI:744110-744544 ( 7) CTACCACTAAGCTAAGGAGGC 1 chrVII:1003981-1004421 ( 65) CTACCACTAAGCTAAGGAGGC 1 chrVII:661506-661993 ( 50) CTACCACTAAGCTAAGGAGGC 1 chrXIV:569648-570165 ( 64) AACCAACTGGGCCAAGAGACC 1 chrIX:183286-183718 ( 41) AACCAACTGGGCCAAGAGACC 1 chrXII:734629-734985 ( 45) AACCAACTGGGCCAAGAGACC 1 chrX:396611-396711 ( 48) TTACCACTAAACCACTTGCGC 1 chrVII:930860-931167 ( 40) TTACCACTAAACCACTTGCGC 1 chrXV:226443-226870 ( 55) TTACCACTAAACCACTTGCGC 1 chrVI:162046-162373 ( 69) TTACCACTAAACCACTTGCGC 1 chrII:350605-351080 ( 35) TAACCACTACACTATAAAACC 1 chrIV:1201522-1201996 ( 41) TACCGATTGCGCCAACAAGGC 1 chrV:435614-435990 ( 52) TACCGATTGCGCCAACAAGGC 1 chrIII:151116-151551 ( 53) TACCGATTGCGCCAACAAGGC 1 chrX:414820-414920 ( 11) TACCGATTGCGCCAACAAGGC 1 chrX:424250-424350 ( 72) AGACCACTCGGCCAACCCTCC 1 chrXI:83970-84420 ( 63) AGACCACTCGGCCAACCCTCC 1 chrXII:962832-963298 ( 20) AGACCACTCGGCCAACCCTCC 1 chrIV:1150724-1151124 ( 47) TAACCACTCGGCCACTGGGAC 1 chrXV:663556-664123 ( 76) AACCGACTAGACCACGAAACC 1 chrXIII:586442-586916 ( 60) AACCGACTAGACCACGAAACC 1 chrV:469276-469663 ( 38) AACCGACTAGACCACGAAACC 1 chrXII:592328-592839 ( 66) AAACCACTCGGCCAAACTCCC 1 chrXIII:747744-748143 ( 50) TTGCCATTACGCCACGCGAGC 1 chrII:326560-327103 ( 64) GAACCACTGGACCATTGGACC 1 chrVII:531406-531816 ( 49) TGACCATTAAACTATCACGGA 1 chrVII:544412-544900 ( 22) TGACCATTAAACTATCACGGA 1 chrX:233741-233841 ( 46) TGACCATTGGGCCACGAGGAA 1 chrIV:568708-569287 ( 17) TGACCATTAAACTATCACGGA 1 chrII:405675-406232 ( 57) TGACCATTAAACTATCACGGA 1 chrXV:571726-572136 ( 77) TGACCATTAAACTATCACGGA 1 chrXII:426932-427425 ( 4) TGACCATTAAACTATCACGGA 1 chrVII:115334-115720 ( 11) TACCAACTGAGCTAACAAGGA 1 chrX:355195-355295 ( 29) TGACCATTAAACTATCACGGA 1 chrV:99908-100338 ( 60) CTTCCACTGCGCCACGGCGCT 1 chrX:517652-517752 ( 45) CTTCCACTGCGCCACGGCGCT 1 chrIII:149714-150189 ( 19) CTTCCACTGCGCCACGGCGCT 1 chrXV:353917-354304 ( 33) TACCAACTTGGCCATAGAAGC 1 chrXIV:374628-375126 ( 42) TCCCAACTGAGCTAAGTCCGC 1 chrX:58993-59093 ( 4) TACCAACTTGGCCATAGAAGC 1 chrVIII:358291-358776 ( 66) TCCCAACTGAGCTAAATCCGC 1 chrVII:878498-879115 ( 39) CTACCATTGAGCCACCGCTTC 1 chrVII:287166-287680 ( 62) CTACCATTGAGCCACCGCTTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWACCACTRVRCYAHVNVVSC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 48000 bayes= 9.57157 E= 5.1e-094 -45 -39 -356 102 71 -256 -10 -6 106 61 -356 -256 -1253 232 -1253 -1253 -82 180 -56 -1253 174 -1253 -1253 -1253 -1253 190 -1253 -24 -1253 -1253 -1253 174 71 -56 76 -314 10 69 83 -1253 50 -1253 153 -1253 -1253 232 -1253 -1253 -1253 173 -1253 18 174 -1253 -1253 -1253 31 69 -1253 2 -34 69 76 -156 18 3 44 -69 -34 53 103 -215 -15 35 96 -182 -314 135 108 -314 -98 200 -1253 -256 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWACCACTRVRCYAHVNVVSC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 59 E= 5.1e-094 0.220339 0.152542 0.016949 0.610169 0.491525 0.033898 0.186441 0.288136 0.627119 0.305085 0.016949 0.050847 0.000000 1.000000 0.000000 0.000000 0.169492 0.694915 0.135593 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.745763 0.000000 0.254237 0.000000 0.000000 0.000000 1.000000 0.491525 0.135593 0.338983 0.033898 0.322034 0.322034 0.355932 0.000000 0.423729 0.000000 0.576271 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.661017 0.000000 0.338983 1.000000 0.000000 0.000000 0.000000 0.372881 0.322034 0.000000 0.305085 0.237288 0.322034 0.338983 0.101695 0.338983 0.203390 0.271186 0.186441 0.237288 0.288136 0.406780 0.067797 0.271186 0.254237 0.389831 0.084746 0.033898 0.508475 0.423729 0.033898 0.152542 0.796610 0.000000 0.050847 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWACCACTRVRCYAHVNVVSC MEME-2 regular expression -------------------------------------------------------------------------------- [TA][AT][AC]CCA[CT]T[AG][GAC][GA]C[CT]A[ACT][GCA][AGC][GCA][GAC][CG]C -------------------------------------------------------------------------------- Time 677.20 secs. ******************************************************************************** ******************************************************************************** MOTIF RARAAAAARAAAAADAANAA MEME-3 width = 20 sites = 100 llr = 1008 E-value = 3.5e-042 ******************************************************************************** -------------------------------------------------------------------------------- Motif RARAAAAARAAAAADAANAA MEME-3 Description -------------------------------------------------------------------------------- Simplified A 3857769848a976488387 pos.-specific C 2::::2:::1::2:::1212 probability G 513121:24::112421312 matrix T ::21111:21:::23::31: bits 2.3 2.1 1.9 1.6 * Relative 1.4 * Entropy 1.2 ** ** (14.5 bits) 0.9 * ** *** ** 0.7 ** * ** **** ** * 0.5 ***** ******* ** ** 0.2 ***************** ** 0.0 -------------------- Multilevel GAAAAAAAAAAAAAAAAAAA consensus A G G TG G sequence C T T T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RARAAAAARAAAAADAANAA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------- chrX:607912-608012 - 76 3.99e-08 CATCT GATAAAAAAAAAATTAAAAA ACAATAATCT chrXII:369626-371396 - 21 4.76e-08 AAAACGCCAC CAAAAAAAAAAAAATAAAAG CCAATCCTCG chrIII:227771-230125 - 59 6.83e-08 TTGTTCCGAA AAAAAAAAAAAACGGAAAAA TATATTTTTT chrXV:1003937-1004965 - 78 1.55e-07 GAA CAGAAAAAAAAAATGAAGTA AAATATTGGA chrIII:78118-78879 + 63 1.81e-07 GCCGGTCAAG GAAAAAAAGAAACCAAAAAA AAATGCCGTG chrXIII:287477-287785 - 7 1.81e-07 GCGCCGTGAG GAGAAAAAGAAACTTAAAAG TGAAGC chrXVI:188354-189123 + 15 2.47e-07 GCCATCCCAT CAAAAAAAATAAAAAAAGAA AACCCTTGCA chrV:225437-225740 + 12 2.87e-07 TTTCTTTTTC CAGAAAAAGAAAGAAAAAAG CCGGCGGTCG chrXIV:759156-759740 + 58 2.87e-07 AAAAAGGGGA GAAAAAAAGAAAAGAAAGCC AGATCTTTCA chrXV:24364-24625 + 13 3.31e-07 ACGAATAATC GAAAATAAGAAAAGAACAAA GTAAATTTAG chrIV:541260-541906 + 23 3.83e-07 GAAGCACAAG AAGAATAAGAAAAAAGAAAA TCAGCAAGAA chrXIV:355232-355838 - 23 4.43e-07 ACAACTAAGT CAAAAGAAAAAAAGAGAGAA TTATTTTGCT chrXIII:145750-146294 - 38 4.43e-07 AGCAAAAAAG GTAAACAAGAAAAGGAAGAA AAGAACCCAG chrXII:449315-449837 - 70 6.70e-07 TAACGGATAT AAGAGCAGGAAAAAAAAAAA AGCAGGAGGC chrXI:513057-513596 + 34 7.68e-07 TTACAGGAGG AATAAAAAGCAAAATAAAAA ATCTCCGCGA chrII:642815-643242 + 10 8.77e-07 TTCAATAAG GATTGCAAAAAAAAAAAGAA GCTCGCACTC chrVII:856585-857816 - 72 8.77e-07 ACTTTTCAC GAAACAAAGAAAATGAAGTA CGCGTCTAGA chrVII:648759-649357 + 76 9.99e-07 AAGATCTTCG GATAAAAATAAAAAGAAGGC GATGA chrVI:136935-137679 + 64 9.99e-07 ATGAAGACGC GAATTAAAAAAAAATAATAA ACTGGTTCAT chrVII:771784-772263 - 76 9.99e-07 CGAAA GAAAAAAAGAAAAATACGGC TGAAATAGTG chrXV:438464-439042 - 72 1.14e-06 TTTATAGTG GGGAAAAAAGAAAAGAAGAG GATGGTACCC chrXIV:738841-739720 - 3 1.14e-06 ACACATTCTT GAGGGAAGGAAAAAGGAAAA AG chrXII:703642-704917 + 23 1.14e-06 AAGAAAAGGC GAAAAGAAAAAGAAAAAGTA TGTCCGCTAA chrVII:976974-977478 + 75 1.47e-06 GGAAATACTT CATATAAAAAAAAAGAATAC AATCAG chrXVI:338456-339190 + 52 1.47e-06 AAAAAATGAA GAGTAAAAAGAAAAAAATAA ATTTAGCGCC chrXVI:559949-560276 - 70 1.66e-06 CTTGCAAGTT GAAGAAAGAAAAATAAATAG AGCCAATTAT chrXIII:797745-798253 - 16 1.87e-06 AGCGTATAAT GGAAGAAAAAAAATGAATTA TCATATGTGC chrXII:1011622-1012718 + 42 2.12e-06 CCCCACTGGC GGGAAAAAGAAAAAGCACAC ACACAAACAA chrIV:1095140-1095632 + 20 2.12e-06 TGCGTCACTG GGAAAAAATAAAAATGCGAA CTCTGTGGAT chrIV:543540-543909 + 23 2.12e-06 ACACTGCCAA GAGAATAATTAAAAGAAAAA ACACCCCAAA chrXII:1028215-1028596 - 71 2.39e-06 AACGATTTTT GAAGGCAAGAAAAAAAATTA TGACCCATAC chrXI:431365-432486 + 12 2.68e-06 AAAGAGAGTC GTGAAAAATAAAATAAACAA TGTCCACCGA chrXIV:715970-716610 - 6 3.01e-06 ACGCCTTCAA AATAAAAAAAAGATGGACAA AAGAG chrVI:226344-227256 - 77 3.01e-06 ACAA AGAGACAGGAAAAAGAAAAA ATTATGGTGC chrIII:107142-107841 + 11 3.01e-06 GACGTTTCCT GAGTATAAGAAAAATAAGCA AAATAAGTAT chrXIII:362939-363329 + 67 3.38e-06 TTTTTTTTTC AAAGAAAAGAAAAAGGGAAG GCAACAAACG chrIX:426785-427870 - 25 3.38e-06 CTGAAAACCA GTGAAAAAAAAAAAGGCAAA AAGTTTTTTT chrXIII:625835-627086 - 38 3.38e-06 TATTCTCCGG GAAAAAAAGAAGAAACAAAG AGATCCCGAA chrIV:221324-222333 + 74 3.79e-06 AATATAAGAT GAAAACAGAAAACAAGCGAA ATTTCAA chrXIV:661982-662536 - 47 3.79e-06 CAAGAAGAAC AAGAACAAGAACAAGAACAA GAACAACAAA chrXIII:131601-132065 + 25 4.23e-06 AGCATATTCA AAAAAGAAGAAACAAAGCAC TCACGATGGG chrIX:210525-211246 + 53 4.23e-06 CTGCAATGAG AATGGAAAAAAAATTAAAAA AACTCACATA chrIX:370220-370720 - 70 4.23e-06 GAGCGGATAT GAAAAAAATAAAATAAACAT ACTCCGATAC chrXIV:632436-632879 - 62 4.23e-06 AAGACTATCT GAAATAAGAAAAAAAACGAC CCCAGTGAGG chrXIII:651559-653023 - 2 4.72e-06 CCTTTTTCAA AAAACCAAAAAAAGGAAAAG A chrIX:248519-249757 + 63 5.27e-06 TTGCTTTCTC GGGGAAAGGAAAAGGAGAAA GCCCGGATAA chrXIII:170065-171394 - 65 5.27e-06 AAGCGCAATC CAAAAGAAACAAAATGAAAA TCTAGTCAGG chrII:44990-45374 - 80 5.27e-06 T GAAAAAAAAAAAGAACCGAA TCTGGAAAGA chrII:592860-593442 + 27 5.87e-06 CAAACTGTAG AAAAAAAAGTAAGGAAATAA TTTATTTTTA chrXII:712290-712715 - 33 5.87e-06 GGAGCTTAAA AGTAACAAGAAACAAAATAG CAGTCATGCC chrV:492200-492546 + 10 5.87e-06 GAAAAAGTT GATTAAAAGAAAAATAATCC TTCCCCGCCA chrXV:619130-624444 - 2 5.87e-06 AATGTTTATT AATAAGTAGAAAAAGAATAC A chrXV:877416-878044 - 24 6.53e-06 TAATAAGCTA GAAAACAAAAAAGTTAACGA GCAAAATCGT chrXV:109321-110681 - 39 6.53e-06 AACTAAAGAT GATAAAAATAAAATTAGGTA AGAAACCTTA chrXV:79751-80159 - 66 6.53e-06 AATGACTGCT GAGACAAAAAAAGAAAGCAA CTCCATGTAA chrIX:177520-178241 - 48 7.25e-06 CCAGAGCCAA GAGATGAGAAAAAATACGAA ATGCGCAGGA chrVIII:466811-467329 - 50 8.05e-06 AAATAAGAAC AAAGGGAAAAAAAATAATAC CGGTATAATG chrX:703244-703344 - 7 8.05e-06 CAGTTCAGCA GGAAATAAACAAATAAACAA ACATTA chrXIV:576672-577569 - 73 8.92e-06 GTACATGA AATAATAAAAAACCGAAAAA TGCATACATA chrXV:110850-111495 + 26 8.92e-06 TTTTAGCTCT AAAATAAAACAAAATAAGAG AAAGATAAAA chrII:604109-607137 - 9 8.92e-06 ACCCATTTTC AAATGAAATAAAAATGACAA AGTAAAAT chrVII:323423-325115 - 3 8.92e-06 TGAATGTGGG AAGAAAAGGAAAGGAAAATA AG chrXV:287415-288563 - 46 8.92e-06 ATGAGTACTA GAGAAGAGAAAAAAAAATAT TCTACAAAGA chrXII:1029154-1030325 - 22 8.92e-06 CCGTTCTTCA AAGAGAAAGAAGCGGACAAA TATTGCTTCA chrXVI:134998-135864 + 57 8.92e-06 TTGTCGATGG GATAAAGGTAAAAAGAACAA CGTAATTAAA chrXVI:810586-811453 - 46 9.87e-06 AGTAAGCGGC CAAAACGAAAAAAGTAATAA TCCTAAATTG chrXVI:627289-627772 - 78 9.87e-06 TTA AAATGAAAAAAAAGAAACTA TACAACCCAC chrIV:1236379-1238412 - 36 1.09e-05 TTGTAACTAT CATAATAAAAAAATGAAGCG ATGCACTCAT chrXII:796360-796847 + 9 1.20e-05 TGCAGTAC CAGGACAAGAAGCTAAAAAA AAAGCTCTGT chrXI:381601-382481 + 60 1.20e-05 AGTGACCTAG CAGTAGAGGAAACAGAATAC AATGCAGTAC chrXII:722729-723110 - 69 1.20e-05 ACGACGTAAG GAGAAGAAAAAGCGGGAAAC GGATTTCTCG chrVII:541714-542144 - 42 1.61e-05 CTCTTTTTCA AGAGGTAAGAAAAAGAACAC TCCGATACGG chrV:194797-195220 + 15 1.61e-05 GCATACTGCA CCGAAAAAAAAAGTTAATAA GCAGCAGGAT chrXVI:900946-902035 - 45 1.94e-05 GAATGGACCA GAAAGTAATGAAAAGGATAA GGTTATTGGC chrIV:322458-323601 + 12 1.94e-05 ATGCTTAAAT CAATTAAATAAAAATAATAC TCATTTTATA chrXIII:320969-321327 + 36 2.13e-05 TAGTTAGCCA AAAAAATAAAAAATGGACGA GTCCGGAATC chrXIII:225141-225905 - 81 2.13e-05 . GAAAAATAAAAAATAGAATG TACGGATGTA chrXIV:102590-103164 - 43 2.55e-05 GAAGTAAAGC AGTTAAAGGAAAAGAGAGAA ACTACATTCT chrIII:30258-31017 + 48 2.79e-05 CGATTCTCGA CAAATAAAGAAAAAGGCGCG TTTAAAGACT chrVII:938985-939736 + 68 3.05e-05 ATATATATAC CGAAACAAGAAAATGAGTTC TATATATTTG chrIII:299060-299385 - 44 3.05e-05 ACGTTTTGCC AAGATAAATTAAAAAGAGAA CGTGCATATG chrIV:1161464-1164777 + 63 3.32e-05 GTTTCTGGCA CAAAGAAGAAAACGTAGAAG TAGGCGAAAA chrXV:383037-383481 - 8 3.32e-05 GTAGAAAATA CATAGTAAGAAACGAAATTA TATCATA chrVII:555172-557478 - 8 3.62e-05 AACGTCTATT GAAAACAAATAATAAAAAAA TTTGTTA chrII:680099-682511 + 64 3.62e-05 GCAGCGCCAC CAGAAAAAGAAGACGAGCGA AGAAATCAAC chrV:435614-435990 - 81 3.62e-05 . CATAAGAATCAGAAAAACAA CAATAAGAGC chrXVI:699847-700555 - 48 3.95e-05 AGAAAATCTG GAAGAGTAAAAAAGGAGTAG AAACATTTTG chrXI:578767-579323 - 66 4.29e-05 ATTGAACGCC GAATCTAAAAAAGTAAAGAA CTCCTCATAG chrXIV:560508-560815 + 62 4.29e-05 TTTTGAATAG GAATGATGGAAAAAAAATTA TGCTTCCAAT chrXII:374211-374724 - 81 5.06e-05 . GCAAACAATAAAGATAAGTA AAGTTAACGA chrXIV:444429-444758 + 44 5.06e-05 CCGAAATATT GAAATTAAGCAAAACAATAA TGTACGGATT chrVI:19361-19900 + 53 5.49e-05 CTTATATTTC CGGAAAAAAAAGCTTAAAGA TAAAAGGTTA chrVII:794214-794561 - 20 5.95e-05 CGTTACGTAT AAAAAATATTAAATGAACAG ATCCACACTC chrXIV:217242-217542 + 40 6.44e-05 TACTAAGACG GAAGACAAAAAGATGACGCG CAACGCGAAA chrVII:876193-878325 + 2 6.44e-05 A CAGTGGAAGAAACCGAGGAA GATACAGTGG chrXII:1051918-1052215 + 35 7.53e-05 CCCATTATTT ACTTAAAGTAAAAAAAATAA TGGTCTCTAG chrIV:490738-492607 - 64 8.13e-05 TTCTATTAGT CGTAACAATAAACATGCTAA GAATTCAATA chrVII:426933-427703 - 18 1.02e-04 CAATGTCGTG GATAAATAAGAGCTGAATAA TACTTCTTCA chrVI:101172-101561 - 27 1.02e-04 TTATTGTTGC GTTAATAAGAAAAACAGAAA TATTTAGATA chrXVI:941924-942844 - 62 1.36e-04 TTCATTAATG AGAAGATATAAACATACTAA ATATTAACAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RARAAAAARAAAAADAANAA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:607912-608012 4e-08 75_[-3]_5 chrXII:369626-371396 4.8e-08 20_[-3]_60 chrIII:227771-230125 6.8e-08 58_[-3]_22 chrXV:1003937-1004965 1.5e-07 77_[-3]_3 chrIII:78118-78879 1.8e-07 62_[+3]_18 chrXIII:287477-287785 1.8e-07 6_[-3]_74 chrXVI:188354-189123 2.5e-07 14_[+3]_66 chrV:225437-225740 2.9e-07 11_[+3]_69 chrXIV:759156-759740 2.9e-07 57_[+3]_23 chrXV:24364-24625 3.3e-07 12_[+3]_68 chrIV:541260-541906 3.8e-07 22_[+3]_58 chrXIV:355232-355838 4.4e-07 22_[-3]_58 chrXIII:145750-146294 4.4e-07 37_[-3]_43 chrXII:449315-449837 6.7e-07 69_[-3]_11 chrXI:513057-513596 7.7e-07 33_[+3]_47 chrII:642815-643242 8.8e-07 9_[+3]_71 chrVII:856585-857816 8.8e-07 71_[-3]_9 chrVII:648759-649357 1e-06 75_[+3]_5 chrVI:136935-137679 1e-06 63_[+3]_17 chrVII:771784-772263 1e-06 75_[-3]_5 chrXV:438464-439042 1.1e-06 71_[-3]_9 chrXIV:738841-739720 1.1e-06 2_[-3]_78 chrXII:703642-704917 1.1e-06 22_[+3]_58 chrVII:976974-977478 1.5e-06 74_[+3]_6 chrXVI:338456-339190 1.5e-06 51_[+3]_29 chrXVI:559949-560276 1.7e-06 69_[-3]_11 chrXIII:797745-798253 1.9e-06 15_[-3]_65 chrXII:1011622-1012718 2.1e-06 41_[+3]_39 chrIV:1095140-1095632 2.1e-06 19_[+3]_61 chrIV:543540-543909 2.1e-06 22_[+3]_58 chrXII:1028215-1028596 2.4e-06 70_[-3]_10 chrXI:431365-432486 2.7e-06 11_[+3]_69 chrXIV:715970-716610 3e-06 5_[-3]_75 chrVI:226344-227256 3e-06 76_[-3]_4 chrIII:107142-107841 3e-06 10_[+3]_70 chrXIII:362939-363329 3.4e-06 66_[+3]_14 chrIX:426785-427870 3.4e-06 24_[-3]_56 chrXIII:625835-627086 3.4e-06 37_[-3]_43 chrIV:221324-222333 3.8e-06 73_[+3]_7 chrXIV:661982-662536 3.8e-06 46_[-3]_34 chrXIII:131601-132065 4.2e-06 24_[+3]_56 chrIX:210525-211246 4.2e-06 52_[+3]_28 chrIX:370220-370720 4.2e-06 69_[-3]_11 chrXIV:632436-632879 4.2e-06 61_[-3]_19 chrXIII:651559-653023 4.7e-06 1_[-3]_79 chrIX:248519-249757 5.3e-06 62_[+3]_18 chrXIII:170065-171394 5.3e-06 64_[-3]_16 chrII:44990-45374 5.3e-06 79_[-3]_1 chrII:592860-593442 5.9e-06 26_[+3]_54 chrXII:712290-712715 5.9e-06 32_[-3]_48 chrV:492200-492546 5.9e-06 9_[+3]_71 chrXV:619130-624444 5.9e-06 1_[-3]_79 chrXV:877416-878044 6.5e-06 23_[-3]_57 chrXV:109321-110681 6.5e-06 38_[-3]_42 chrXV:79751-80159 6.5e-06 65_[-3]_15 chrIX:177520-178241 7.3e-06 47_[-3]_33 chrVIII:466811-467329 8e-06 49_[-3]_31 chrX:703244-703344 8e-06 6_[-3]_74 chrXIV:576672-577569 8.9e-06 72_[-3]_8 chrXV:110850-111495 8.9e-06 25_[+3]_55 chrII:604109-607137 8.9e-06 8_[-3]_72 chrVII:323423-325115 8.9e-06 2_[-3]_78 chrXV:287415-288563 8.9e-06 45_[-3]_35 chrXII:1029154-1030325 8.9e-06 21_[-3]_59 chrXVI:134998-135864 8.9e-06 56_[+3]_24 chrXVI:810586-811453 9.9e-06 45_[-3]_35 chrXVI:627289-627772 9.9e-06 77_[-3]_3 chrIV:1236379-1238412 1.1e-05 35_[-3]_45 chrXII:796360-796847 1.2e-05 8_[+3]_72 chrXI:381601-382481 1.2e-05 59_[+3]_21 chrXII:722729-723110 1.2e-05 68_[-3]_12 chrVII:541714-542144 1.6e-05 41_[-3]_39 chrV:194797-195220 1.6e-05 14_[+3]_66 chrXVI:900946-902035 1.9e-05 44_[-3]_36 chrIV:322458-323601 1.9e-05 11_[+3]_69 chrXIII:320969-321327 2.1e-05 35_[+3]_45 chrXIII:225141-225905 2.1e-05 80_[-3] chrXIV:102590-103164 2.6e-05 42_[-3]_38 chrIII:30258-31017 2.8e-05 47_[+3]_33 chrVII:938985-939736 3e-05 67_[+3]_13 chrIII:299060-299385 3e-05 43_[-3]_37 chrIV:1161464-1164777 3.3e-05 62_[+3]_18 chrXV:383037-383481 3.3e-05 7_[-3]_73 chrVII:555172-557478 3.6e-05 7_[-3]_73 chrII:680099-682511 3.6e-05 63_[+3]_17 chrV:435614-435990 3.6e-05 80_[-3] chrXVI:699847-700555 3.9e-05 47_[-3]_33 chrXI:578767-579323 4.3e-05 65_[-3]_15 chrXIV:560508-560815 4.3e-05 61_[+3]_19 chrXII:374211-374724 5.1e-05 80_[-3] chrXIV:444429-444758 5.1e-05 43_[+3]_37 chrVI:19361-19900 5.5e-05 52_[+3]_28 chrVII:794214-794561 6e-05 19_[-3]_61 chrXIV:217242-217542 6.4e-05 39_[+3]_41 chrVII:876193-878325 6.4e-05 1_[+3]_79 chrXII:1051918-1052215 7.5e-05 34_[+3]_46 chrIV:490738-492607 8.1e-05 63_[-3]_17 chrVII:426933-427703 0.0001 17_[-3]_63 chrVI:101172-101561 0.0001 26_[-3]_54 chrXVI:941924-942844 0.00014 61_[-3]_19 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RARAAAAARAAAAADAANAA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RARAAAAARAAAAADAANAA width=20 seqs=100 chrX:607912-608012 ( 76) GATAAAAAAAAAATTAAAAA 1 chrXII:369626-371396 ( 21) CAAAAAAAAAAAAATAAAAG 1 chrIII:227771-230125 ( 59) AAAAAAAAAAAACGGAAAAA 1 chrXV:1003937-1004965 ( 78) CAGAAAAAAAAAATGAAGTA 1 chrIII:78118-78879 ( 63) GAAAAAAAGAAACCAAAAAA 1 chrXIII:287477-287785 ( 7) GAGAAAAAGAAACTTAAAAG 1 chrXVI:188354-189123 ( 15) CAAAAAAAATAAAAAAAGAA 1 chrV:225437-225740 ( 12) CAGAAAAAGAAAGAAAAAAG 1 chrXIV:759156-759740 ( 58) GAAAAAAAGAAAAGAAAGCC 1 chrXV:24364-24625 ( 13) GAAAATAAGAAAAGAACAAA 1 chrIV:541260-541906 ( 23) AAGAATAAGAAAAAAGAAAA 1 chrXIV:355232-355838 ( 23) CAAAAGAAAAAAAGAGAGAA 1 chrXIII:145750-146294 ( 38) GTAAACAAGAAAAGGAAGAA 1 chrXII:449315-449837 ( 70) AAGAGCAGGAAAAAAAAAAA 1 chrXI:513057-513596 ( 34) AATAAAAAGCAAAATAAAAA 1 chrII:642815-643242 ( 10) GATTGCAAAAAAAAAAAGAA 1 chrVII:856585-857816 ( 72) GAAACAAAGAAAATGAAGTA 1 chrVII:648759-649357 ( 76) GATAAAAATAAAAAGAAGGC 1 chrVI:136935-137679 ( 64) GAATTAAAAAAAAATAATAA 1 chrVII:771784-772263 ( 76) GAAAAAAAGAAAAATACGGC 1 chrXV:438464-439042 ( 72) GGGAAAAAAGAAAAGAAGAG 1 chrXIV:738841-739720 ( 3) GAGGGAAGGAAAAAGGAAAA 1 chrXII:703642-704917 ( 23) GAAAAGAAAAAGAAAAAGTA 1 chrVII:976974-977478 ( 75) CATATAAAAAAAAAGAATAC 1 chrXVI:338456-339190 ( 52) GAGTAAAAAGAAAAAAATAA 1 chrXVI:559949-560276 ( 70) GAAGAAAGAAAAATAAATAG 1 chrXIII:797745-798253 ( 16) GGAAGAAAAAAAATGAATTA 1 chrXII:1011622-1012718 ( 42) GGGAAAAAGAAAAAGCACAC 1 chrIV:1095140-1095632 ( 20) GGAAAAAATAAAAATGCGAA 1 chrIV:543540-543909 ( 23) GAGAATAATTAAAAGAAAAA 1 chrXII:1028215-1028596 ( 71) GAAGGCAAGAAAAAAAATTA 1 chrXI:431365-432486 ( 12) GTGAAAAATAAAATAAACAA 1 chrXIV:715970-716610 ( 6) AATAAAAAAAAGATGGACAA 1 chrVI:226344-227256 ( 77) AGAGACAGGAAAAAGAAAAA 1 chrIII:107142-107841 ( 11) GAGTATAAGAAAAATAAGCA 1 chrXIII:362939-363329 ( 67) AAAGAAAAGAAAAAGGGAAG 1 chrIX:426785-427870 ( 25) GTGAAAAAAAAAAAGGCAAA 1 chrXIII:625835-627086 ( 38) GAAAAAAAGAAGAAACAAAG 1 chrIV:221324-222333 ( 74) GAAAACAGAAAACAAGCGAA 1 chrXIV:661982-662536 ( 47) AAGAACAAGAACAAGAACAA 1 chrXIII:131601-132065 ( 25) AAAAAGAAGAAACAAAGCAC 1 chrIX:210525-211246 ( 53) AATGGAAAAAAAATTAAAAA 1 chrIX:370220-370720 ( 70) GAAAAAAATAAAATAAACAT 1 chrXIV:632436-632879 ( 62) GAAATAAGAAAAAAAACGAC 1 chrXIII:651559-653023 ( 2) AAAACCAAAAAAAGGAAAAG 1 chrIX:248519-249757 ( 63) GGGGAAAGGAAAAGGAGAAA 1 chrXIII:170065-171394 ( 65) CAAAAGAAACAAAATGAAAA 1 chrII:44990-45374 ( 80) GAAAAAAAAAAAGAACCGAA 1 chrII:592860-593442 ( 27) AAAAAAAAGTAAGGAAATAA 1 chrXII:712290-712715 ( 33) AGTAACAAGAAACAAAATAG 1 chrV:492200-492546 ( 10) GATTAAAAGAAAAATAATCC 1 chrXV:619130-624444 ( 2) AATAAGTAGAAAAAGAATAC 1 chrXV:877416-878044 ( 24) GAAAACAAAAAAGTTAACGA 1 chrXV:109321-110681 ( 39) GATAAAAATAAAATTAGGTA 1 chrXV:79751-80159 ( 66) GAGACAAAAAAAGAAAGCAA 1 chrIX:177520-178241 ( 48) GAGATGAGAAAAAATACGAA 1 chrVIII:466811-467329 ( 50) AAAGGGAAAAAAAATAATAC 1 chrX:703244-703344 ( 7) GGAAATAAACAAATAAACAA 1 chrXIV:576672-577569 ( 73) AATAATAAAAAACCGAAAAA 1 chrXV:110850-111495 ( 26) AAAATAAAACAAAATAAGAG 1 chrII:604109-607137 ( 9) AAATGAAATAAAAATGACAA 1 chrVII:323423-325115 ( 3) AAGAAAAGGAAAGGAAAATA 1 chrXV:287415-288563 ( 46) GAGAAGAGAAAAAAAAATAT 1 chrXII:1029154-1030325 ( 22) AAGAGAAAGAAGCGGACAAA 1 chrXVI:134998-135864 ( 57) GATAAAGGTAAAAAGAACAA 1 chrXVI:810586-811453 ( 46) CAAAACGAAAAAAGTAATAA 1 chrXVI:627289-627772 ( 78) AAATGAAAAAAAAGAAACTA 1 chrIV:1236379-1238412 ( 36) CATAATAAAAAAATGAAGCG 1 chrXII:796360-796847 ( 9) CAGGACAAGAAGCTAAAAAA 1 chrXI:381601-382481 ( 60) CAGTAGAGGAAACAGAATAC 1 chrXII:722729-723110 ( 69) GAGAAGAAAAAGCGGGAAAC 1 chrVII:541714-542144 ( 42) AGAGGTAAGAAAAAGAACAC 1 chrV:194797-195220 ( 15) CCGAAAAAAAAAGTTAATAA 1 chrXVI:900946-902035 ( 45) GAAAGTAATGAAAAGGATAA 1 chrIV:322458-323601 ( 12) CAATTAAATAAAAATAATAC 1 chrXIII:320969-321327 ( 36) AAAAAATAAAAAATGGACGA 1 chrXIII:225141-225905 ( 81) GAAAAATAAAAAATAGAATG 1 chrXIV:102590-103164 ( 43) AGTTAAAGGAAAAGAGAGAA 1 chrIII:30258-31017 ( 48) CAAATAAAGAAAAAGGCGCG 1 chrVII:938985-939736 ( 68) CGAAACAAGAAAATGAGTTC 1 chrIII:299060-299385 ( 44) AAGATAAATTAAAAAGAGAA 1 chrIV:1161464-1164777 ( 63) CAAAGAAGAAAACGTAGAAG 1 chrXV:383037-383481 ( 8) CATAGTAAGAAACGAAATTA 1 chrVII:555172-557478 ( 8) GAAAACAAATAATAAAAAAA 1 chrII:680099-682511 ( 64) CAGAAAAAGAAGACGAGCGA 1 chrV:435614-435990 ( 81) CATAAGAATCAGAAAAACAA 1 chrXVI:699847-700555 ( 48) GAAGAGTAAAAAAGGAGTAG 1 chrXI:578767-579323 ( 66) GAATCTAAAAAAGTAAAGAA 1 chrXIV:560508-560815 ( 62) GAATGATGGAAAAAAAATTA 1 chrXII:374211-374724 ( 81) GCAAACAATAAAGATAAGTA 1 chrXIV:444429-444758 ( 44) GAAATTAAGCAAAACAATAA 1 chrVI:19361-19900 ( 53) CGGAAAAAAAAGCTTAAAGA 1 chrVII:794214-794561 ( 20) AAAAAATATTAAATGAACAG 1 chrXIV:217242-217542 ( 40) GAAGACAAAAAGATGACGCG 1 chrVII:876193-878325 ( 2) CAGTGGAAGAAACCGAGGAA 1 chrXII:1051918-1052215 ( 35) ACTTAAAGTAAAAAAAATAA 1 chrIV:490738-492607 ( 64) CGTAACAATAAACATGCTAA 1 chrVII:426933-427703 ( 18) GATAAATAAGAGCTGAATAA 1 chrVI:101172-101561 ( 27) GTTAATAAGAAAAACAGAAA 1 chrXVI:941924-942844 ( 62) AGAAGATATAAACATACTAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RARAAAAARAAAAADAANAA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 48600 bayes= 9.41275 E= 3.5e-042 -10 14 132 -1329 140 -273 -51 -291 76 -1329 49 -52 130 -1329 -74 -110 122 -232 -23 -174 92 -23 -62 -121 158 -1329 -332 -191 148 -1329 -32 -1329 55 -1329 96 -82 148 -174 -232 -232 174 -1329 -1329 -1329 155 -432 -86 -1329 126 -15 -115 -490 87 -232 -23 -32 30 -332 85 -26 140 -273 -15 -1329 134 -62 -86 -1329 0 -23 43 -21 132 -174 -174 -121 114 -41 -23 -391 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RARAAAAARAAAAADAANAA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 100 E= 3.5e-042 0.280000 0.220000 0.500000 0.000000 0.790000 0.030000 0.140000 0.040000 0.510000 0.000000 0.280000 0.210000 0.740000 0.000000 0.120000 0.140000 0.700000 0.040000 0.170000 0.090000 0.570000 0.170000 0.130000 0.130000 0.900000 0.000000 0.020000 0.080000 0.840000 0.000000 0.160000 0.000000 0.440000 0.000000 0.390000 0.170000 0.840000 0.060000 0.040000 0.060000 1.000000 0.000000 0.000000 0.000000 0.880000 0.010000 0.110000 0.000000 0.720000 0.180000 0.090000 0.010000 0.550000 0.040000 0.170000 0.240000 0.370000 0.020000 0.360000 0.250000 0.790000 0.030000 0.180000 0.000000 0.760000 0.130000 0.110000 0.000000 0.300000 0.170000 0.270000 0.260000 0.750000 0.060000 0.060000 0.130000 0.660000 0.150000 0.170000 0.020000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RARAAAAARAAAAADAANAA MEME-3 regular expression -------------------------------------------------------------------------------- [GAC]A[AGT]AAAAA[AG]AAAA[AT][AGT]AA[AGT]AA -------------------------------------------------------------------------------- Time 995.73 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:375956-376298 2.02e-01 100 chrVIII:173440-176216 9.70e-01 100 chrXV:24364-24625 3.12e-03 12_[+3(3.31e-07)]_68 chrVII:148009-148638 1.57e-01 100 chrXI:307887-308415 3.56e-06 50_[+1(9.47e-10)]_25 chrI:166173-166586 6.11e-01 100 chrIV:1278574-1279871 3.94e-01 100 chrXVI:828779-829482 3.52e-02 74_[-1(3.89e-05)]_1 chrXIII:753018-755073 5.73e-01 100 chrVII:478968-482891 7.39e-01 100 chrVII:364903-366720 7.81e-01 100 chrXI:431365-432486 1.30e-04 11_[+3(2.68e-06)]_42_[-2(5.18e-05)]_\ 6 chrIV:543540-543909 1.01e-02 22_[+3(2.12e-06)]_58 chrIII:107142-107841 8.54e-03 16_[+3(2.12e-06)]_64 chrXVI:425255-425638 8.94e-01 100 chrIV:946158-946644 6.63e-04 16_[-1(1.80e-07)]_59 chrXII:11237-11498 1.27e-01 100 chrIX:257339-258280 8.31e-02 100 chrXIV:568054-568922 9.52e-01 100 chrIV:758773-759646 6.89e-01 100 chrXII:449315-449837 3.24e-03 69_[-3(6.70e-07)]_11 chrIX:254201-254585 8.19e-01 100 chrII:266220-266669 5.70e-07 23_[-1(2.36e-09)]_52 chrXI:517198-518361 8.31e-01 100 chrXVI:134998-135864 1.89e-02 56_[+3(8.92e-06)]_24 chrVII:370777-371530 8.21e-01 100 chrXV:710122-710582 3.99e-01 100 chrXII:201670-202685 5.42e-01 100 chrVII:876193-878325 1.07e-01 1_[+3(6.44e-05)]_79 chrXV:842336-842962 1.44e-01 100 chrXIII:219729-221144 3.62e-01 100 chrV:85069-86998 5.63e-01 100 chrXVI:585662-587661 5.90e-01 100 chrII:408600-408964 4.94e-02 100 chrIV:550888-551547 8.03e-01 100 chrXV:619130-624444 8.50e-03 1_[-3(5.87e-06)]_79 chrIV:601152-601514 7.62e-01 100 chrXIII:826332-826933 9.92e-01 100 chrVI:222886-225853 7.90e-01 100 chrXII:780512-781863 4.64e-01 100 chrVIII:148942-149275 3.93e-01 100 chrX:520360-520460 8.90e-01 100 chrVII:277042-278740 2.26e-01 100 chrVIII:381438-382508 3.03e-01 100 chrXII:950113-950296 7.87e-03 100 chrXIII:296726-298850 7.62e-01 100 chrXIV:240826-241851 9.84e-01 100 chrXIV:675623-676046 2.78e-01 100 chrI:222887-223078 9.93e-01 100 chrXVI:768989-769467 9.38e-08 36_[+1(5.14e-10)]_39 chrXIII:161917-162683 5.59e-02 100 chrIV:1361861-1362747 7.87e-01 100 chrXV:514331-514768 2.41e-01 100 chrXIII:287477-287785 1.04e-03 6_[-3(1.81e-07)]_74 chrVII:919827-920266 2.86e-01 100 chrII:87833-88575 5.24e-01 100 chrX:355195-355295 1.39e-08 28_[-2(6.61e-07)]_18_[-1(2.50e-08)]_\ 8 chrVI:162046-162373 2.80e-04 68_[-2(4.73e-08)]_11 chrXVI:303100-304349 5.94e-01 100 chrVI:63985-65368 9.86e-01 100 chrXI:354379-356503 2.63e-01 100 chrXII:897685-899762 2.65e-01 100 chrXII:97588-97860 2.77e-01 100 chrXI:38753-39334 2.16e-01 100 chrV:152071-153303 2.75e-01 100 chrIV:721008-722880 2.28e-01 100 chrVII:115334-115720 2.89e-09 10_[-2(6.61e-07)]_42_[-1(5.14e-10)]_\ 2 chrXIII:388300-388670 9.72e-01 100 chrXIV:104617-105109 4.21e-06 31_[-1(2.36e-09)]_44 chrXIII:145750-146294 2.87e-03 37_[-3(4.43e-07)]_43 chrXII:592328-592839 2.05e-04 65_[+2(1.67e-07)]_14 chrVII:999865-1000653 4.80e-01 100 chrXI:108684-110153 4.72e-01 100 chrXI:617708-619311 5.75e-01 100 chrXII:1029154-1030325 3.82e-03 21_[-3(8.92e-06)]_59 chrXVI:302643-302901 6.33e-01 100 chrV:191941-192656 2.98e-01 100 chrXII:447851-448848 3.27e-01 100 chrIV:884269-884582 9.08e-01 100 chrXII:231778-234254 2.51e-01 100 chrII:36258-36644 2.16e-05 54_[-1(2.12e-09)]_21 chrXVI:502452-503314 8.61e-01 100 chrV:492200-492546 2.35e-07 9_[+3(5.87e-06)]_7_[+1(4.54e-08)]_\ 39 chrXIV:661982-662536 1.09e-02 40_[-3(3.79e-06)]_40 chrVII:779393-779930 7.89e-13 4_[-2(3.57e-09)]_18_[-1(3.08e-10)]_\ 32 chrXII:423710-424808 8.79e-01 100 chrII:44990-45374 1.01e-02 79_[-3(5.27e-06)]_1 chrXII:954236-954799 4.50e-02 71_[-2(3.88e-05)]_8 chrXV:925200-925439 2.82e-01 100 chrVIII:34376-36304 2.45e-01 100 chrVI:167251-167707 7.84e-05 63_[-1(1.80e-07)]_12 chrXI:21302-21824 1.61e-01 100 chrXV:1003937-1004965 1.06e-03 1_[-3(4.72e-06)]_56_[-3(1.55e-07)]_\ 3 chrVII:774152-774731 5.56e-02 100 chrXV:159240-160730 6.20e-01 100 chrVII:677831-678049 6.43e-01 100 chrXVI:280518-282969 7.98e-01 100 chrXII:603425-604011 4.45e-01 100 chrXVI:821626-822393 6.19e-01 100 chrVIII:293324-293506 4.46e-01 100 chrV:422688-425460 8.12e-01 100 chrXII:86925-87203 8.21e-01 100 chrXVI:622045-622841 1.42e-01 100 chrXIII:91072-92096 7.26e-01 100 chrXII:369194-369457 4.74e-02 15_[-2(7.08e-05)]_64 chrII:504516-505269 6.71e-02 100 chrVII:1048834-1050703 3.54e-02 100 chrXVI:930678-931036 2.48e-01 100 chrXIII:101234-101629 7.75e-01 100 chrXV:79751-80159 1.87e-02 65_[-3(6.53e-06)]_15 chrXIII:170065-171394 2.48e-02 64_[-3(5.27e-06)]_16 chrIV:1355714-1356023 8.57e-01 100 chrV:396165-396596 4.10e-01 100 chrVI:95392-95958 4.03e-01 100 chrIX:255041-256927 9.12e-01 100 chrXVI:941924-942844 1.18e-01 100 chrXV:479627-481137 8.81e-02 100 chrXII:962832-963298 1.64e-04 19_[+2(9.70e-08)]_60 chrIV:1300448-1301334 7.32e-01 100 chrXV:391451-391987 5.98e-01 100 chrVII:661506-661993 3.04e-04 49_[-2(3.66e-08)]_30 chrXIII:651559-653023 1.68e-02 1_[-3(4.72e-06)]_79 chrVIII:76069-76403 8.69e-01 100 chrIV:368587-369191 3.39e-01 100 chrIII:227771-230125 5.24e-04 58_[-3(6.83e-08)]_22 chrVII:405467-405773 5.90e-01 100 chrXV:989800-989979 8.16e-01 100 chrXIII:797745-798253 2.02e-03 15_[-3(1.87e-06)]_65 chrXV:853661-854766 1.37e-11 31_[+1(1.02e-10)]_19_[+2(1.83e-08)]_\ 4 chrX:414820-414920 2.05e-10 10_[-2(7.70e-08)]_19_[-1(3.99e-10)]_\ 25 chrVII:533805-535180 1.16e-01 100 chrX:293688-293788 8.47e-02 80_[+3(3.62e-05)] chrXII:611427-612142 8.72e-01 100 chrXII:234563-234921 2.30e-01 100 chrXVI:775366-776043 3.92e-02 60_[+3(4.66e-05)]_20 chrXIII:653184-653882 1.14e-01 100 chrXIV:426853-427347 2.01e-01 100 chrIV:835755-836315 2.38e-01 100 chrVII:411845-412564 1.77e-01 100 chrXI:385133-385487 8.59e-01 100 chrXI:282657-284807 9.29e-01 100 chrV:41632-42663 6.87e-01 100 chrXI:513057-513596 9.55e-08 33_[+3(7.68e-07)]_10_[+1(2.50e-08)]_\ 12 chrI:28106-28948 6.27e-01 100 chrX:290899-290999 3.02e-01 100 chrXIII:625835-627086 2.12e-03 37_[-3(3.38e-06)]_43 chrVII:345842-346676 4.75e-01 100 chrX:415739-415839 6.78e-04 8_[+1(1.16e-07)]_67 chrX:744963-745063 7.37e-01 100 chrVII:951358-951729 1.87e-01 100 chrXIV:6618-7468 3.27e-01 100 chrII:301108-302147 2.53e-01 100 chrXIII:480383-480820 5.88e-01 100 chrXII:1051918-1052215 2.61e-09 34_[+3(7.53e-05)]_8_[+1(7.85e-12)]_\ 13 chrVIII:74712-75894 6.21e-01 100 chrIX:426785-427870 1.48e-02 22_[-3(2.39e-06)]_58 chrVII:422916-423505 9.56e-01 100 chrVIII:451223-453138 2.91e-01 100 chrXVI:406142-406793 5.67e-01 100 chrXII:426932-427425 1.33e-08 3_[-2(6.61e-07)]_18_[-1(2.50e-08)]_\ 33 chrVII:959309-959645 3.64e-01 100 chrXIII:282864-283439 5.19e-01 100 chrV:377771-380210 8.18e-01 100 chrVI:226344-227256 1.66e-03 76_[-3(3.01e-06)]_4 chrIV:1095140-1095632 1.09e-08 19_[+3(2.12e-06)]_2_[+1(2.12e-09)]_\ 34 chrIV:357200-357841 9.50e-02 100 chrXII:1002279-1003357 1.87e-01 100 chrVII:1003981-1004421 1.58e-04 64_[-2(3.66e-08)]_15 chrX:360201-360301 4.23e-01 100 chrXV:31043-31206 2.16e-02 32_[+1(1.18e-05)]_43 chrVIII:554008-554734 4.99e-01 100 chrXV:109321-110681 9.23e-03 38_[-3(6.53e-06)]_42 chrXI:302701-303245 7.37e-04 67_[-1(1.16e-07)]_8 chrXIV:103368-103599 4.46e-01 100 chrVII:986511-987824 3.81e-01 100 chrXIV:560508-560815 3.92e-02 61_[+3(4.29e-05)]_19 chrX:204555-204655 2.59e-04 10_[-1(2.50e-08)]_65 chrXIV:417580-418251 2.25e-01 100 chrX:139183-139283 7.62e-01 100 chrV:321955-323355 6.25e-01 100 chrIII:15232-16812 1.64e-01 100 chrXVI:860166-860738 2.04e-06 14_[-1(5.14e-10)]_61 chrIII:82383-82688 1.16e-01 100 chrIII:149714-150189 6.84e-07 18_[-2(9.06e-07)]_18_[-1(1.56e-07)]_\ 18 chrIV:309763-310181 4.74e-01 100 chrXV:571726-572136 2.66e-04 76_[-2(6.61e-07)]_3 chrX:607912-608012 1.28e-04 75_[-3(3.99e-08)]_5 chrI:71773-73701 7.92e-01 100 chrX:136058-136158 9.80e-01 100 chrXII:522205-523677 2.78e-01 100 chrIV:83437-83999 2.59e-01 100 chrVII:736198-736627 2.57e-06 16_[-1(7.44e-10)]_59 chrXII:734629-734985 2.47e-04 44_[-2(4.16e-08)]_35 chrIV:915103-916301 7.33e-01 100 chrXVI:55875-56417 1.08e-01 100 chrVII:914819-915537 3.85e-01 100 chrXIV:725767-726338 8.62e-01 100 chrX:348793-348893 4.21e-01 100 chrIV:1345235-1346083 4.41e-01 100 chrX:115781-115881 1.14e-01 100 chrXIV:763924-764485 4.66e-01 100 chrXIII:808082-808535 7.75e-05 38_[+2(1.83e-08)]_41 chrIV:382015-384781 7.06e-03 68_[+1(4.02e-05)]_7 chrXIV:444429-444758 9.04e-02 43_[+3(5.06e-05)]_37 chrVII:287166-287680 1.64e-03 61_[+2(1.97e-06)]_18 chrXI:457869-458929 8.54e-01 100 chrV:194797-195220 2.68e-02 14_[+3(1.61e-05)]_66 chrVIII:521899-522477 9.42e-01 100 chrVII:149108-149483 7.43e-01 100 chrXIV:525072-525257 5.06e-01 100 chrIII:315617-316592 6.91e-01 100 chrXII:805380-807122 6.62e-01 100 chrIV:117153-117930 1.30e-01 40_[-1(8.08e-05)]_35 chrIII:295324-296023 6.45e-01 100 chrXV:226443-226870 1.61e-10 12_[+1(5.14e-10)]_17_[+2(4.73e-08)]_\ 25 chrXII:818506-819172 7.20e-01 100 chrIII:262571-262995 7.79e-01 100 chrXVI:338456-339190 6.54e-03 51_[+3(1.47e-06)]_29 chrIV:806228-806495 6.25e-01 100 chrXV:216282-216719 3.59e-01 100 chrXIII:549632-552016 8.56e-01 100 chrII:405675-406232 5.40e-10 13_[-1(7.44e-10)]_18_[-2(6.61e-07)]_\ 23 chrXVI:608242-608555 9.88e-01 100 chrIV:568708-569287 1.39e-08 16_[-2(6.61e-07)]_18_[-1(2.50e-08)]_\ 20 chrVIII:504752-505539 6.00e-01 100 chrXIII:760452-763150 2.87e-01 100 chrV:305825-306926 2.20e-01 100 chrXII:636718-640051 7.34e-01 100 chrV:550874-551560 7.32e-01 100 chrII:415571-416209 6.10e-01 100 chrVII:56398-58881 1.32e-02 46_[+2(7.81e-06)]_33 chrXV:877416-878044 7.29e-03 23_[-3(6.53e-06)]_57 chrVII:205327-206480 7.49e-01 100 chrII:256205-257916 3.09e-01 100 chrXII:47490-49245 6.49e-01 100 chrV:266149-268117 7.00e-01 100 chrIV:392522-393740 9.63e-01 100 chrVI:180652-181238 4.46e-01 100 chrXIII:352112-353320 1.49e-01 100 chrXIII:914885-915721 6.22e-01 100 chrXI:142941-143369 2.17e-01 100 chrXI:313193-314001 2.53e-01 100 chrX:58993-59093 4.35e-03 3_[+2(1.05e-06)]_76 chrV:434392-434978 9.94e-01 100 chrXV:347423-348144 4.50e-01 100 chrV:487114-487572 2.65e-07 45_[+1(8.86e-11)]_30 chrXVI:731626-732301 4.91e-01 100 chrVII:856585-857816 1.43e-03 71_[-3(8.77e-07)]_9 chrXV:407576-408225 4.92e-02 41_[+3(9.45e-05)]_39 chrIV:1450730-1451450 8.00e-01 100 chrX:651921-652021 8.31e-02 100 chrXI:261125-262128 5.18e-01 100 chrXII:262212-263957 2.79e-01 100 chrXII:921100-922887 3.28e-01 100 chrIX:197395-197802 1.29e-01 100 chrVII:1011092-1011575 9.89e-01 100 chrXVI:692851-695456 2.46e-01 100 chrIII:177017-178806 5.89e-01 100 chrIII:78118-78879 1.69e-03 30_[-3(2.33e-05)]_12_[+3(1.81e-07)]_\ 18 chrIV:118449-118857 5.43e-01 100 chrXV:383037-383481 8.24e-02 7_[-3(3.32e-05)]_73 chrIX:97231-97600 8.59e-01 100 chrXV:986915-989634 3.10e-02 59_[+2(7.08e-05)]_20 chrIV:218309-218792 1.09e-01 100 chrIV:490738-492607 1.23e-01 63_[-3(8.13e-05)]_17 chrVII:291715-291910 1.02e-01 100 chrII:350605-351080 9.87e-11 34_[-2(6.84e-08)]_18_[-1(1.36e-10)]_\ 2 chrIV:1086843-1087404 1.44e-01 100 chrXIV:374628-375126 6.20e-05 41_[-2(1.05e-06)]_38 chrXVI:627289-627772 5.09e-03 77_[-3(9.87e-06)]_3 chrXI:230359-231740 4.99e-01 100 chrXII:645809-646282 3.83e-01 100 chrXIII:225141-225905 3.04e-02 80_[-3(2.13e-05)] chrVII:976974-977478 5.84e-04 74_[+3(1.47e-06)]_6 chrXV:1053802-1054469 9.96e-01 100 chrIV:1269904-1271045 1.79e-01 100 chrIX:394230-395760 4.32e-01 100 chrIV:578881-580658 9.51e-01 100 chrXIII:253289-253639 7.04e-01 100 chrIII:151116-151551 3.00e-10 8_[+1(3.99e-10)]_19_[+2(7.70e-08)]_\ 27 chrXIV:102590-103164 7.16e-02 42_[-3(2.55e-05)]_38 chrXIV:632436-632879 1.62e-07 32_[-1(2.54e-07)]_4_[-3(4.23e-06)]_\ 19 chrXII:281959-282344 4.68e-01 100 chrVII:730975-731429 1.35e-04 25_[-1(2.54e-07)]_50 chrXII:416125-416284 7.05e-02 100 chrVII:10253-10412 6.11e-01 100 chrIV:1150724-1151124 6.28e-04 46_[+2(1.35e-07)]_33 chrX:517652-517752 3.53e-07 1_[+1(1.56e-07)]_18_[+2(9.06e-07)]_\ 35 chrVII:185377-185797 2.86e-01 100 chrIII:30258-31017 2.98e-02 47_[+3(2.79e-05)]_33 chrIX:183286-183718 4.21e-04 40_[+2(4.16e-08)]_39 chrVI:101172-101561 3.60e-06 59_[-2(1.36e-08)]_20 chrII:88946-90058 9.43e-01 100 chrIV:9-338 2.48e-01 100 chrVII:541714-542144 7.79e-09 9_[-1(8.86e-11)]_7_[-3(1.61e-05)]_\ 39 chrV:469276-469663 8.66e-04 37_[-2(1.50e-07)]_42 chrXII:459604-460748 4.28e-01 100 chrXV:487449-487781 4.95e-01 100 chrXV:353917-354304 3.81e-03 32_[+2(1.05e-06)]_47 chrXIV:715970-716610 1.35e-02 5_[-3(3.01e-06)]_32_[-3(8.77e-05)]_\ 23 chrXV:968014-968558 9.72e-01 100 chrX:523776-523876 6.28e-05 12_[+2(2.44e-08)]_67 chrV:66617-69590 5.08e-01 100 chrVIII:50248-50905 9.86e-01 100 chrVII:110311-110773 6.90e-01 100 chrIV:1352013-1353385 5.87e-01 100 chrXII:64875-66060 2.96e-01 100 chrV:435614-435990 2.54e-12 7_[+1(3.99e-10)]_19_[+2(7.70e-08)]_\ 8_[-3(3.62e-05)] chrXIII:279937-280434 3.04e-02 100 chrVIII:512169-512455 7.32e-01 100 chrIX:332703-333270 3.02e-01 100 chrVII:438557-438989 5.47e-01 100 chrIX:248519-249757 1.86e-02 62_[+3(5.27e-06)]_18 chrXII:1028215-1028596 5.39e-03 70_[-3(2.39e-06)]_10 chrIV:766117-766488 5.06e-01 100 chrIV:980714-981166 2.80e-01 100 chrXI:83970-84420 4.31e-04 62_[-2(9.70e-08)]_17 chrVIII:562394-562580 9.44e-01 100 chrX:703244-703344 2.81e-02 6_[-3(8.05e-06)]_74 chrIV:1433590-1433762 6.25e-01 100 chrIII:168152-168515 2.63e-11 25_[+1(1.36e-10)]_18_[+2(1.83e-08)]_\ 11 chrXII:36652-37344 7.88e-01 100 chrXI:162242-162724 9.15e-06 61_[+1(7.44e-10)]_14 chrXIII:747744-748143 2.69e-10 6_[+1(7.44e-10)]_18_[+2(3.62e-07)]_\ 30 chrXVI:188354-189123 2.09e-04 14_[+3(2.47e-07)]_66 chrIV:1433944-1434914 5.82e-01 100 chrIV:599481-600342 3.31e-01 100 chrXV:901358-901650 1.93e-01 100 chrIX:138073-139349 5.12e-01 100 chrXIV:330802-331656 5.85e-02 5_[-1(4.77e-05)]_70 chrIV:1443810-1444110 3.98e-01 100 chrXIII:887055-889382 1.84e-01 100 chrIV:216574-218063 2.33e-01 100 chrII:413769-415304 3.27e-01 100 chrXV:392138-392490 1.21e-01 100 chrVIII:466811-467329 3.25e-06 8_[-1(2.38e-07)]_16_[-3(8.05e-06)]_\ 31 chrXIII:431678-432609 1.38e-01 100 chrXV:759772-760208 5.14e-01 100 chrIX:370220-370720 1.41e-09 35_[-1(8.86e-11)]_9_[-3(4.23e-06)]_\ 11 chrIV:1161464-1164777 3.41e-02 62_[+3(3.32e-05)]_18 chrII:431326-431599 6.81e-01 100 chrXII:759084-759329 7.82e-01 100 chrIII:123316-123809 6.42e-10 72_[+1(2.13e-14)]_3 chrXIII:119295-119882 8.27e-01 100 chrVII:384092-385035 8.20e-01 100 chrXV:252895-253633 6.07e-01 100 chrXVI:644324-646217 2.73e-01 100 chrX:18840-18940 6.93e-01 100 chrVII:738809-739687 7.92e-01 100 chrXIV:172599-174686 9.77e-01 100 chrV:241923-242644 1.84e-01 100 chrIV:1236379-1238412 3.06e-02 35_[-3(1.09e-05)]_45 chrII:642815-643242 1.33e-11 9_[+3(8.77e-07)]_7_[+1(4.04e-07)]_\ 18_[+2(1.83e-08)] chrVII:878498-879115 1.26e-03 38_[+2(1.97e-06)]_41 chrXV:444610-446238 1.05e-01 100 chrXII:712290-712715 1.07e-02 32_[-3(5.87e-06)]_48 chrIV:229564-231775 6.46e-02 100 chrVII:483248-483744 3.86e-03 35_[-1(1.31e-06)]_40 chrXVI:699847-700555 4.07e-02 47_[-3(3.95e-05)]_33 chrXIV:759156-759740 5.56e-04 57_[+3(2.87e-07)]_23 chrXII:521877-522032 4.00e-01 100 chrXV:758973-759589 5.44e-01 100 chrXV:92732-94785 7.96e-01 100 chrIV:322458-323601 5.25e-02 11_[+3(1.94e-05)]_69 chrVII:794214-794561 1.32e-06 19_[-3(5.95e-05)]_40_[-2(1.83e-08)] chrIV:221324-222333 5.62e-03 73_[+3(3.79e-06)]_7 chrXVI:810586-811453 3.26e-03 45_[-3(9.87e-06)]_35 chrXVI:39723-40657 6.46e-01 100 chrXIV:493706-495774 9.64e-01 100 chrVI:55012-55890 1.74e-01 100 chrXV:287415-288563 4.27e-03 45_[-3(8.92e-06)]_35 chrV:354690-355368 3.65e-01 100 chrIX:316133-318516 5.46e-01 100 chrVIII:455127-456262 7.77e-01 100 chrVII:930860-931167 3.21e-04 39_[+2(4.73e-08)]_40 chrII:90265-90455 3.86e-01 100 chrX:227705-227805 7.84e-01 100 chrXIV:585488-586521 9.46e-01 100 chrX:233741-233841 2.56e-03 45_[-2(6.61e-07)]_34 chrX:545411-545511 9.14e-01 100 chrII:370883-371172 7.71e-01 100 chrX:396611-396711 1.61e-10 5_[+1(5.14e-10)]_17_[+2(4.73e-08)]_\ 32 chrXIV:546563-547709 1.20e-05 7_[-2(1.36e-08)]_72 chrIV:975905-977191 1.25e-01 100 chrXV:866354-868116 8.07e-01 100 chrXII:950493-953998 2.33e-01 100 chrIV:125327-126096 8.77e-01 100 chrII:181157-181680 2.29e-01 100 chrXII:703642-704917 5.39e-03 22_[+3(1.14e-06)]_58 chrVIII:379405-379921 7.69e-01 100 chrVII:515852-518966 9.12e-01 100 chrI:141525-143624 1.48e-01 100 chrX:120456-120556 1.09e-01 100 chrXVI:744110-744544 6.74e-08 6_[-2(3.66e-08)]_18_[-1(5.19e-07)]_\ 30 chrX:662705-662805 2.19e-01 100 chrXI:463328-463823 1.91e-02 36_[+1(8.91e-05)]_39 chrII:164659-165897 6.57e-01 100 chrIV:1461477-1461843 5.19e-02 100 chrVIII:235802-236866 2.22e-01 100 chrIV:411059-411704 7.13e-01 100 chrI:182201-183136 8.98e-01 100 chrXVI:559949-560276 5.32e-03 69_[-3(1.66e-06)]_11 chrV:362224-362503 3.46e-01 100 chrV:61057-62146 1.16e-01 100 chrXIII:661118-662466 3.39e-01 100 chrVIII:103523-105521 4.04e-01 100 chrVII:323423-325115 3.69e-02 2_[-3(8.92e-06)]_78 chrIV:132688-132969 6.76e-01 100 chrXIV:301060-302315 5.90e-01 100 chrIV:306678-307653 7.57e-01 100 chrVII:364202-364434 5.42e-01 100 chrXV:28377-29580 8.80e-01 100 chrXI:364531-365198 6.11e-01 100 chrVIII:133963-134770 2.70e-11 4_[-2(1.83e-08)]_18_[-1(1.36e-10)]_\ 32 chrX:424250-424350 5.14e-08 9_[-1(7.95e-08)]_37_[+2(9.70e-08)]_\ 8 chrXIII:552507-553182 5.01e-01 100 chrXI:98872-100091 9.34e-01 100 chrXIV:61967-64532 9.64e-01 100 chrVII:544412-544900 4.10e-03 21_[+2(6.61e-07)]_58 chrXIII:873852-874325 1.72e-01 100 chrXV:464291-464827 2.33e-07 9_[-1(3.50e-10)]_66 chrXVI:794455-794820 3.08e-01 100 chrXII:1011622-1012718 1.08e-02 41_[+3(2.12e-06)]_39 chrIV:45196-46157 5.54e-01 100 chrV:490870-491954 9.76e-01 100 chrVII:771784-772263 3.69e-03 75_[-3(9.99e-07)]_5 chrX:453347-453447 4.22e-01 100 chrII:391392-391904 9.20e-01 100 chrV:335479-336538 8.60e-02 100 chrXII:722729-723110 1.19e-02 68_[-3(1.20e-05)]_12 chrVI:136935-137679 4.37e-03 63_[+3(9.99e-07)]_17 chrII:372100-374921 1.12e-01 100 chrXV:1027859-1029101 2.81e-01 100 chrXVI:74932-76758 3.32e-01 100 chrXIII:362939-363329 1.19e-05 18_[-1(9.96e-07)]_1_[-3(5.06e-05)]_\ 2_[+3(3.38e-06)]_14 chrXII:241612-242040 4.11e-01 100 chrXII:567893-568358 8.35e-01 100 chrIV:541260-541906 1.26e-03 22_[+3(3.83e-07)]_58 chrVI:157905-158182 7.32e-01 100 chrXVI:900946-902035 7.96e-03 44_[-3(1.94e-05)]_36 chrII:604109-607137 2.04e-02 8_[-3(8.92e-06)]_72 chrXV:110850-111495 2.56e-02 25_[+3(8.92e-06)]_55 chrVII:397913-398557 5.00e-01 100 chrVII:310474-312600 9.22e-01 100 chrIV:555397-556685 2.60e-01 100 chrXVI:920845-921521 5.97e-01 100 chrXIV:239985-240279 4.61e-01 100 chrVII:436583-438272 6.03e-01 100 chrII:592860-593442 3.48e-03 26_[+3(5.87e-06)]_54 chrVII:828433-828966 8.32e-01 100 chrVII:206729-206953 6.68e-01 100 chrXIV:738841-739720 5.24e-03 2_[-3(1.14e-06)]_78 chrXII:252970-255236 9.00e-01 100 chrXII:198358-199767 5.67e-01 100 chrXI:7754-8268 3.21e-01 100 chrX:26181-26281 6.96e-01 100 chrXV:438464-439042 1.07e-09 2_[-1(5.14e-10)]_44_[-3(1.14e-06)]_\ 9 chrVIII:121935-122639 4.90e-01 100 chrIV:1075272-1075735 2.29e-08 26_[+1(1.18e-10)]_49 chrXIII:504931-505242 6.12e-01 100 chrXV:779371-781029 9.24e-01 100 chrXIV:96018-96512 1.33e-11 33_[+1(3.08e-10)]_18_[+2(3.57e-09)]_\ 3 chrV:441807-442678 7.69e-01 100 chrV:135203-136035 2.35e-01 100 chrII:60817-61245 5.24e-01 100 chrV:130844-131350 1.47e-07 42_[+1(2.36e-10)]_33 chrXI:518651-521235 5.98e-01 100 chrXI:140679-142583 9.04e-01 100 chrIV:645028-645365 2.97e-11 14_[+1(1.36e-10)]_18_[+2(1.83e-08)]_\ 22 chrIV:234186-234683 8.46e-01 100 chrII:197261-197834 2.87e-08 37_[-1(7.85e-12)]_38 chrXII:348058-348708 1.00e+00 100 chrXII:416582-417093 4.65e-01 100 chrII:680099-682511 9.29e-02 63_[+3(3.62e-05)]_17 chrV:249773-250538 1.85e-02 52_[+1(5.45e-05)]_23 chrV:225437-225740 2.47e-03 11_[+3(2.87e-07)]_69 chrII:9385-9953 1.72e-04 21_[+1(7.95e-08)]_54 chrIX:210525-211246 1.10e-02 52_[+3(4.23e-06)]_28 chrX:223725-223825 8.33e-01 100 chrIII:141957-142972 4.19e-02 100 chrIV:340174-341648 2.36e-01 100 chrIV:437555-438082 2.46e-05 3_[-2(2.44e-08)]_76 chrX:265350-265450 7.65e-01 100 chrV:443049-443376 3.53e-08 47_[+1(7.85e-12)]_28 chrXIV:217242-217542 1.21e-01 39_[+3(6.44e-05)]_41 chrXVI:819303-820211 1.26e-01 100 chrII:378814-379289 7.94e-01 100 chrIV:1468762-1469141 9.11e-01 100 chrXIV:355232-355838 2.47e-04 22_[-3(4.43e-07)]_58 chrIV:1201522-1201996 6.97e-04 40_[-2(7.70e-08)]_39 chrXV:167991-168456 5.39e-01 100 chrX:606017-606117 5.50e-01 100 chrVII:787069-788711 7.30e-01 100 chrXVI:371079-372854 1.84e-01 100 chrXV:908430-909192 3.42e-01 100 chrXIV:776557-777174 4.54e-01 100 chrIX:338767-339057 9.79e-01 100 chrVII:624990-625826 8.79e-01 100 chrXVI:172888-174125 2.19e-01 100 chrXVI:378625-378999 4.42e-01 100 chrXVI:575180-575957 5.19e-01 100 chrXVI:450790-453244 2.98e-01 100 chrXIII:183790-183964 2.22e-01 100 chrVII:989723-990720 7.35e-01 100 chrVIII:296680-297253 6.36e-01 100 chrVI:220802-222090 4.33e-02 22_[-2(7.08e-05)]_57 chrV:53491-53922 2.71e-01 100 chrXIII:67319-68069 9.65e-01 100 chrI:68233-69271 6.35e-01 100 chrXI:811-1032 8.68e-01 100 chrXIV:721146-723172 6.26e-01 100 chrXIV:569648-570165 3.32e-12 18_[+1(7.85e-12)]_20_[+2(4.16e-08)]_\ 16 chrXIII:586442-586916 8.18e-10 14_[+1(9.47e-10)]_20_[+2(1.50e-07)]_\ 20 chrI:81900-82331 8.09e-01 100 chrII:702114-702628 9.35e-01 100 chrV:431025-431904 7.43e-01 100 chrVII:426933-427703 7.71e-02 100 chrIII:137821-139366 4.08e-02 100 chrII:326560-327103 8.43e-10 18_[+1(2.06e-10)]_20_[+2(4.33e-07)]_\ 16 chrIV:591710-592118 7.22e-02 100 chrXIII:309684-310081 2.82e-01 100 chrXVI:701874-702326 7.80e-01 100 chrXII:656834-657204 7.74e-05 16_[+2(9.96e-09)]_63 chrVII:576412-577196 8.05e-01 100 chrXIV:351659-353050 3.21e-01 100 chrXV:638890-639490 9.91e-01 100 chrI:190004-192163 5.93e-01 100 chrXIII:131601-132065 2.22e-08 24_[+3(4.23e-06)]_5_[+1(7.44e-10)]_\ 26 chrXV:663556-664123 8.18e-10 30_[+1(9.47e-10)]_20_[+2(1.50e-07)]_\ 4 chrXII:628201-628720 9.85e-01 100 chrXIV:392286-393004 4.17e-01 100 chrXV:903799-904847 2.19e-01 100 chrVIII:358291-358776 6.70e-09 2_[+1(2.12e-09)]_38_[+2(1.73e-06)]_\ 14 chrVII:20322-20760 5.65e-01 100 chrXIII:320969-321327 5.83e-07 35_[+3(2.13e-05)]_1_[+1(8.21e-09)]_\ 19 chrVII:531406-531816 7.99e-04 48_[-2(6.61e-07)]_31 chrIV:321641-321964 2.89e-01 100 chrXII:440474-441677 2.64e-01 100 chrIII:299060-299385 5.39e-02 43_[-3(3.05e-05)]_37 chrXII:1017670-1019403 3.57e-01 100 chrXII:374211-374724 7.70e-02 80_[-3(5.06e-05)] chrIV:1359205-1361204 6.20e-01 100 chrXI:381601-382481 3.11e-02 59_[+3(1.20e-05)]_21 chrIX:177520-178241 1.67e-02 17_[-3(9.45e-05)]_10_[-3(7.25e-06)]_\ 33 chrXIV:575094-576496 7.55e-01 100 chrXIII:305936-307404 1.82e-01 100 chrXV:881218-882453 9.03e-01 100 chrXIV:576672-577569 3.69e-02 72_[-3(8.92e-06)]_8 chrXIV:662988-664067 6.46e-01 100 chrIV:129918-130992 5.33e-02 100 chrXII:92345-92717 1.06e-04 66_[-2(1.36e-08)]_13 chrXIII:267274-268320 7.19e-01 100 chrV:77348-79986 7.38e-01 100 chrXII:515300-516932 7.24e-01 100 chrXIV:198244-199466 8.84e-01 100 chrXV:677372-679175 2.47e-01 100 chrV:23375-23870 1.77e-01 100 chrVIII:145458-146458 2.10e-03 58_[+2(1.29e-05)]_21 chrVIII:374639-376051 9.62e-01 100 chrVII:227250-228715 3.07e-01 100 chrIV:546082-546411 4.98e-01 100 chrX:354047-354147 6.90e-02 100 chrXV:80355-81501 8.80e-01 100 chrXVI:649092-649946 8.86e-01 100 chrV:235364-237145 1.83e-01 100 chrXII:796360-796847 3.85e-03 8_[+3(1.20e-05)]_72 chrXII:108169-108988 8.48e-01 100 chrXI:334067-334978 4.51e-01 100 chrVII:440497-440963 5.87e-06 43_[+1(2.12e-09)]_32 chrVII:555172-557478 7.16e-02 7_[-3(3.62e-05)]_73 chrXIV:783421-784325 7.57e-02 100 chrVII:319250-320132 2.05e-01 100 chrXV:836287-836981 9.76e-01 100 chrIV:519658-519960 5.96e-05 41_[+1(7.95e-08)]_34 chrIX:388187-388817 1.77e-01 100 chrVII:938985-939736 2.19e-02 67_[+3(3.05e-05)]_13 chrVII:648759-649357 4.33e-04 75_[+3(9.99e-07)]_5 chrXIII:758977-759600 3.27e-01 100 chrIII:67-1050 1.67e-02 43_[+2(1.78e-05)]_36 chrIV:1233475-1234103 8.00e-01 100 chrXI:379698-381411 7.22e-01 100 chrXII:369626-371396 2.59e-04 20_[-3(4.76e-08)]_60 chrXIII:872400-872955 2.56e-01 100 chrXVI:66778-67509 1.91e-01 100 chrVI:19361-19900 1.26e-01 52_[+3(5.49e-05)]_28 chrV:174607-175082 3.17e-01 100 chrXVI:108803-114966 1.71e-01 100 chrX:540973-541073 6.56e-01 100 chrIX:127494-130245 9.55e-02 100 chrXV:990150-990320 5.18e-01 100 chrV:99908-100338 2.52e-03 59_[-2(9.06e-07)]_20 chrVII:968766-969412 9.46e-02 100 chrVII:702771-703945 2.36e-01 100 chrXIV:518829-519136 2.33e-01 100 chrXI:578767-579323 8.15e-08 32_[-1(5.14e-10)]_8_[-3(4.29e-05)]_\ 15 chrVIII:114907-115683 2.52e-01 100 chrIV:1175620-1176065 1.64e-02 36_[-2(3.07e-05)]_43 chrXII:167760-168210 3.89e-05 69_[+2(2.44e-08)]_10 chrXII:837595-839776 5.31e-01 100 chrXV:670842-671694 9.49e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************