******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/AWRI1631--CUP9/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrII:301186-301931 1.0000 100 chrVIII:34388-36156 1.0000 100 chrXV:28406-30848 1.0000 100 chrVI:221761-222064 1.0000 100 chrXI:74413-74855 1.0000 100 chrI:142150-143676 1.0000 100 chrIV:1256852-1257293 1.0000 100 chrXVI:821620-822223 1.0000 100 chrXIII:549711-551194 1.0000 100 chrVII:405467-405909 1.0000 100 chrVII:319246-320125 1.0000 100 chrXI:219577-220111 1.0000 100 chrIV:570856-573458 1.0000 100 chrIII:127574-127904 1.0000 100 chrXVI:303089-304350 1.0000 100 chrIV:976098-976472 1.0000 100 chrXI:382206-382449 1.0000 100 chrIX:231825-232352 1.0000 100 chrXIV:546579-547357 1.0000 100 chrIV:884265-884637 1.0000 100 chrXII:253887-255092 1.0000 100 chrII:87914-88589 1.0000 100 chrII:255050-255751 1.0000 100 chrXI:325977-327582 1.0000 100 chrXVI:55859-56426 1.0000 100 chrVII:328383-329211 1.0000 100 chrXV:677916-679134 1.0000 100 chrXI:578748-579586 1.0000 100 chrVII:766139-766458 1.0000 100 chrXV:779695-780978 1.0000 100 chrXII:1017717-1019421 1.0000 100 chrV:61047-62175 1.0000 100 chrXVI:559939-560288 1.0000 100 chrII:478967-479575 1.0000 100 chrIV:619697-620229 1.0000 100 chrXV:619635-624452 1.0000 100 chrIV:835768-836253 1.0000 100 chrXIII:726969-731141 1.0000 100 chrVI:180662-181255 1.0000 100 chrXII:687646-687828 1.0000 100 chrVIII:103260-105521 1.0000 100 chrX:422670-422770 1.0000 100 chrVII:255210-255655 1.0000 100 chrVIII:174731-175729 1.0000 100 chrXII:783910-784513 1.0000 100 chrXIII:168190-169043 1.0000 100 chrXIV:172641-174652 1.0000 100 chrXIV:631712-632141 1.0000 100 chrVII:364017-364411 1.0000 100 chrXVI:768996-769482 1.0000 100 chrXII:962813-963311 1.0000 100 chrIV:1450733-1451629 1.0000 100 chrXV:520627-520910 1.0000 100 chrXIII:162961-164365 1.0000 100 chrVII:806172-807759 1.0000 100 chrXI:431889-432345 1.0000 100 chrX:353995-354095 1.0000 100 chrVI:157848-158479 1.0000 100 chrXVI:209999-210556 1.0000 100 chrVI:53232-54420 1.0000 100 chrXI:202348-203304 1.0000 100 chrXII:737784-738888 1.0000 100 chrXI:519545-521073 1.0000 100 chrX:651920-652020 1.0000 100 chrV:176894-177456 1.0000 100 chrIV:980741-981219 1.0000 100 chrVII:121891-122843 1.0000 100 chrXIII:302845-303170 1.0000 100 chrXIV:88935-89935 1.0000 100 chrXII:975705-976189 1.0000 100 chrXII:426866-427503 1.0000 100 chrVII:914852-915958 1.0000 100 chrXI:21287-21800 1.0000 100 chrIII:107151-107772 1.0000 100 chrXII:919523-921526 1.0000 100 chrIII:137755-139010 1.0000 100 chrV:270402-270668 1.0000 100 chrXII:366024-366549 1.0000 100 chrIV:1150730-1151181 1.0000 100 chrXII:48706-49252 1.0000 100 chrVII:185489-185912 1.0000 100 chrXVI:406213-407816 1.0000 100 chrVI:31124-31457 1.0000 100 chrXIV:628233-629044 1.0000 100 chrII:266201-266705 1.0000 100 chrXII:282606-283969 1.0000 100 chrII:45613-46705 1.0000 100 chrXII:837646-839406 1.0000 100 chrXV:901450-901646 1.0000 100 chrVII:989854-990688 1.0000 100 chrVI:210458-210933 1.0000 100 chrX:663647-663747 1.0000 100 chrXV:978808-979159 1.0000 100 chrIV:358089-358514 1.0000 100 chrXV:161148-161945 1.0000 100 chrVII:702813-703232 1.0000 100 chrXVI:188366-189073 1.0000 100 chrXII:459601-460728 1.0000 100 chrXVI:819319-819851 1.0000 100 chrVIII:237752-238282 1.0000 100 chrV:461898-462114 1.0000 100 chrII:256238-257260 1.0000 100 chrXVI:581704-582302 1.0000 100 chrIII:11091-11539 1.0000 100 chrXII:242190-243537 1.0000 100 chrIII:72-1024 1.0000 100 chrIV:411243-411668 1.0000 100 chrXVI:927834-928036 1.0000 100 chrIII:316232-316591 1.0000 100 chrXV:110850-111208 1.0000 100 chrXII:1051915-1052220 1.0000 100 chrIX:99637-100078 1.0000 100 chrV:469249-469727 1.0000 100 chrII:415571-415896 1.0000 100 chrIX:427272-427770 1.0000 100 chrIV:600708-602392 1.0000 100 chrXV:505037-505486 1.0000 100 chrXII:897710-899735 1.0000 100 chrIX:68264-69561 1.0000 100 chrXV:409095-409929 1.0000 100 chrVII:726934-728613 1.0000 100 chrXIII:551361-553191 1.0000 100 chrVIII:119713-121685 1.0000 100 chrXVI:879123-880571 1.0000 100 chrV:362122-362466 1.0000 100 chrVII:531421-531800 1.0000 100 chrXV:976280-976750 1.0000 100 chrXIII:747738-748188 1.0000 100 chrXV:842364-842943 1.0000 100 chrX:454269-454369 1.0000 100 chrVII:648759-649390 1.0000 100 chrX:391815-391915 1.0000 100 chrXII:592309-592992 1.0000 100 chrXII:198366-199735 1.0000 100 chrIV:578822-580733 1.0000 100 chrXIII:586418-587125 1.0000 100 chrXIV:499156-500754 1.0000 100 chrIV:1278624-1279052 1.0000 100 chrVII:541714-542180 1.0000 100 chrII:81454-83803 1.0000 100 chrXI:282814-284968 1.0000 100 chrV:249776-250539 1.0000 100 chrXI:457571-458987 1.0000 100 chrXV:663522-664252 1.0000 100 chrIV:1162583-1164761 1.0000 100 chrXIII:572620-573181 1.0000 100 chrVII:479176-482930 1.0000 100 chrX:520433-520533 1.0000 100 chrXI:7802-8266 1.0000 100 chrVII:986619-987155 1.0000 100 chrXIV:6822-7006 1.0000 100 chrIV:76894-77085 1.0000 100 chrXIII:431903-432356 1.0000 100 chrII:392950-395326 1.0000 100 chrVIII:145727-146459 1.0000 100 chrV:250696-250892 1.0000 100 chrVII:599347-601394 1.0000 100 chrVIII:555104-555432 1.0000 100 chrXVI:338480-339115 1.0000 100 chrXII:424085-424540 1.0000 100 chrVII:1004037-1004420 1.0000 100 chrXIII:259016-259443 1.0000 100 chrIII:142164-142989 1.0000 100 chrII:6875-7104 1.0000 100 chrXII:1002294-1003371 1.0000 100 chrXII:366768-366943 1.0000 100 chrXII:947236-948220 1.0000 100 chrVIII:62522-62934 1.0000 100 chrIV:220927-222369 1.0000 100 chrXV:113472-113884 1.0000 100 chrX:157467-157567 1.0000 100 chrIV:488482-489101 1.0000 100 chrII:181342-181660 1.0000 100 chrII:612024-613923 1.0000 100 chrI:65836-67497 1.0000 100 chrXIV:576683-577692 1.0000 100 chrX:396522-396622 1.0000 100 chrXIV:518820-519138 1.0000 100 chrX:374203-374303 1.0000 100 chrIX:177571-178197 1.0000 100 chrXII:875180-875646 1.0000 100 chrXVI:822723-824204 1.0000 100 chrV:435632-436010 1.0000 100 chrII:477032-477747 1.0000 100 chrIV:520742-521181 1.0000 100 chrIV:1328855-1330046 1.0000 100 chrIV:1401026-1403470 1.0000 100 chrIX:255092-257115 1.0000 100 chrIX:391794-391997 1.0000 100 chrIV:1175611-1176101 1.0000 100 chrXII:440442-441704 1.0000 100 chrVII:857097-857644 1.0000 100 chrXII:780507-781881 1.0000 100 chrXI:558556-559459 1.0000 100 chrII:197176-197832 1.0000 100 chrVII:1057157-1057455 1.0000 100 chrXV:80372-81460 1.0000 100 chrX:517648-517748 1.0000 100 chrVIII:125915-126308 1.0000 100 chrV:85118-86933 1.0000 100 chrXV:92827-94782 1.0000 100 chrXIII:837695-838200 1.0000 100 chrXIII:23993-25522 1.0000 100 chrXIV:568052-568662 1.0000 100 chrVII:544289-544917 1.0000 100 chrIII:163440-164237 1.0000 100 chrV:492204-492553 1.0000 100 chrX:227729-227829 1.0000 100 chrVII:440464-441168 1.0000 100 chrXIV:585435-586514 1.0000 100 chrXVI:435504-436198 1.0000 100 chrXII:855757-857630 1.0000 100 chrXVI:371201-373007 1.0000 100 chrIV:359360-359785 1.0000 100 chrXV:287780-288426 1.0000 100 chrIV:915186-916263 1.0000 100 chrV:396748-397932 1.0000 100 chrXVI:282056-282971 1.0000 100 chrV:354675-355370 1.0000 100 chrXV:281834-282625 1.0000 100 chrIV:1233329-1234223 1.0000 100 chrX:745027-745127 1.0000 100 chrXVI:622178-622843 1.0000 100 chrXV:979723-981227 1.0000 100 chrV:362707-363281 1.0000 100 chrXIII:768179-768439 1.0000 100 chrVI:162010-162380 1.0000 100 chrXII:712272-712708 1.0000 100 chrVII:277034-278710 1.0000 100 chrIV:568668-569282 1.0000 100 chrIV:1359194-1361216 1.0000 100 chrXV:899934-901240 1.0000 100 chrVII:545109-546024 1.0000 100 chrXV:778596-779454 1.0000 100 chrIV:1180271-1181041 1.0000 100 chrII:44799-45363 1.0000 100 chrXIII:225355-226641 1.0000 100 chrI:182156-183175 1.0000 100 chrXIII:420290-420858 1.0000 100 chrXIV:104609-105200 1.0000 100 chrXI:355877-356497 1.0000 100 chrXI:490751-491204 1.0000 100 chrX:414767-414867 1.0000 100 chrVII:147955-149561 1.0000 100 chrXV:423877-424622 1.0000 100 chrVII:287086-287776 1.0000 100 chrXVI:744069-744640 1.0000 100 chrV:51832-53155 1.0000 100 chrXV:505698-506774 1.0000 100 chrX:531569-531669 1.0000 100 chrXI:158233-159654 1.0000 100 chrIV:1305406-1305841 1.0000 100 chrV:117198-118327 1.0000 100 chrVI:95470-95911 1.0000 100 chrIV:386065-387643 1.0000 100 chrVIII:375416-376071 1.0000 100 chrXVI:701868-702321 1.0000 100 chrXVI:280554-281901 1.0000 100 chrXI:312369-314023 1.0000 100 chrXII:1028173-1028561 1.0000 100 chrXV:464282-464659 1.0000 100 chrV:53525-53937 1.0000 100 chrIV:1013423-1013923 1.0000 100 chrXV:1025719-1026057 1.0000 100 chrXII:1029114-1030182 1.0000 100 chrVII:726109-726755 1.0000 100 chrIV:555387-556622 1.0000 100 chrIV:758774-759645 1.0000 100 chrV:311720-312294 1.0000 100 chrXVI:648933-650084 1.0000 100 chrVI:222874-224144 1.0000 100 chrV:135185-136199 1.0000 100 chrXIII:306156-307192 1.0000 100 chrIX:183305-183699 1.0000 100 chrV:166831-167613 1.0000 100 chrVII:555113-556696 1.0000 100 chrVII:695588-697202 1.0000 100 chrXIV:61340-64529 1.0000 100 chrXIII:362945-363372 1.0000 100 chrXI:430798-431644 1.0000 100 chrXIV:374683-375123 1.0000 100 chrXV:79765-80117 1.0000 100 chrXII:521893-522399 1.0000 100 chrIX:248514-249290 1.0000 100 chrXII:628134-628954 1.0000 100 chrV:235071-237136 1.0000 100 chrX:58683-58783 1.0000 100 chrXI:100421-106788 1.0000 100 chrIV:802571-803010 1.0000 100 chrXII:374204-374720 1.0000 100 chrVII:290-2206 1.0000 100 chrXIV:575109-576140 1.0000 100 chrV:487109-487605 1.0000 100 chrV:441775-442652 1.0000 100 chrVII:968878-969089 1.0000 100 chrIV:118431-118861 1.0000 100 chrIX:394806-395639 1.0000 100 chrXV:671065-671465 1.0000 100 chrXV:487440-487750 1.0000 100 chrIV:645009-645368 1.0000 100 chrIV:437534-438113 1.0000 100 chrXI:161987-162734 1.0000 100 chrXII:1011725-1012506 1.0000 100 chrX:73394-73494 1.0000 100 chrXII:673502-674634 1.0000 100 chrXI:46719-47021 1.0000 100 chrXII:370552-371202 1.0000 100 chrIV:434036-435119 1.0000 100 chrIV:1488935-1489944 1.0000 100 chrIV:1362358-1362572 1.0000 100 chrXIII:267654-268270 1.0000 100 chrVII:959952-961694 1.0000 100 chrXVI:93367-94366 1.0000 100 chrXIII:195937-196301 1.0000 100 chrXIV:619735-620035 1.0000 100 chrXIII:861212-861388 1.0000 100 chrXI:517789-518069 1.0000 100 chrX:540782-540882 1.0000 100 chrI:141560-141922 1.0000 100 chrXIV:493696-495031 1.0000 100 chrVI:167250-167688 1.0000 100 chrVII:706944-707180 1.0000 100 chrXI:618732-619290 1.0000 100 chrVI:136641-137703 1.0000 100 chrIV:125303-126021 1.0000 100 chrIX:96814-97577 1.0000 100 chrVII:254106-254707 1.0000 100 chrXV:925188-925435 1.0000 100 chrXV:228004-228548 1.0000 100 chrVII:730956-731435 1.0000 100 chrXIV:783530-784324 1.0000 100 chrIV:916565-917073 1.0000 100 chrV:363671-364481 1.0000 100 chrIX:254206-254554 1.0000 100 chrXV:594310-594648 1.0000 100 chrX:538016-538116 1.0000 100 chrIV:1086784-1087347 1.0000 100 chrXV:866529-868106 1.0000 100 chrV:430999-431957 1.0000 100 chrXIV:632406-632938 1.0000 100 chrII:59547-61299 1.0000 100 chrVII:823342-823696 1.0000 100 chrXIII:732022-733382 1.0000 100 chrXIII:320981-321332 1.0000 100 chrXII:498297-500231 1.0000 100 chrIV:928581-930280 1.0000 100 chrXVI:689392-689841 1.0000 100 chrIII:168107-168541 1.0000 100 chrIV:216759-218079 1.0000 100 chrXIV:525070-525269 1.0000 100 chrXV:877802-877992 1.0000 100 chrX:115608-115708 1.0000 100 chrIV:519659-519909 1.0000 100 chrIV:946146-946648 1.0000 100 chrII:168403-169646 1.0000 100 chrIV:1491988-1492358 1.0000 100 chrXV:380667-381102 1.0000 100 chrX:703261-703361 1.0000 100 chrXVI:731909-732313 1.0000 100 chrXV:226446-226894 1.0000 100 chrV:438517-439013 1.0000 100 chrVIII:554119-554716 1.0000 100 chrXV:348780-349246 1.0000 100 chrIII:292735-292997 1.0000 100 chrV:99887-100337 1.0000 100 chrIV:667669-668207 1.0000 100 chrXVI:810582-811263 1.0000 100 chrXVI:134948-135836 1.0000 100 chrIX:23453-25298 1.0000 100 chrXV:1027790-1029100 1.0000 100 chrVII:779410-779921 1.0000 100 chrVII:856680-856930 1.0000 100 chrI:138975-139363 1.0000 100 chrVII:876153-878187 1.0000 100 chrII:326531-327158 1.0000 100 chrXV:92069-92427 1.0000 100 chrII:9358-9995 1.0000 100 chrVII:788324-788735 1.0000 100 chrIV:1300008-1301334 1.0000 100 chrXI:518892-519202 1.0000 100 chrV:305813-307457 1.0000 100 chrXI:379693-380748 1.0000 100 chrII:350606-351041 1.0000 100 chrVII:345866-346639 1.0000 100 chrXV:960896-963204 1.0000 100 chrXIII:296623-298878 1.0000 100 chrXV:988698-989458 1.0000 100 chrXII:522582-523711 1.0000 100 chrII:644966-645423 1.0000 100 chrVIII:475483-475906 1.0000 100 chrIV:229441-230946 1.0000 100 chrXIII:378858-379617 1.0000 100 chrIII:90867-91088 1.0000 100 chrXVI:775639-776095 1.0000 100 chrXII:64963-65894 1.0000 100 chrVII:624889-625500 1.0000 100 chrX:139121-139221 1.0000 100 chrIV:129709-130982 1.0000 100 chrX:348846-348946 1.0000 100 chrII:604080-607131 1.0000 100 chrVIII:147622-148762 1.0000 100 chrVII:411870-412576 1.0000 100 chrVII:828397-828970 1.0000 100 chrXV:444645-446212 1.0000 100 chrXIV:302625-303866 1.0000 100 chrIX:300005-300498 1.0000 100 chrX:378214-378314 1.0000 100 chrVII:115329-115737 1.0000 100 chrIV:1016948-1017513 1.0000 100 chrIV:720628-721608 1.0000 100 chrXI:302703-303244 1.0000 100 chrXV:353892-354300 1.0000 100 chrX:606084-606184 1.0000 100 chrVII:561461-561709 1.0000 100 chrIV:541203-541908 1.0000 100 chrXIV:241406-241853 1.0000 100 chrVIII:504759-505569 1.0000 100 chrXIV:569698-570147 1.0000 100 chrIX:138561-139141 1.0000 100 chrVIII:505824-506212 1.0000 100 chrVI:155493-156272 1.0000 100 chrIII:123369-123810 1.0000 100 chrVII:878582-879049 1.0000 100 chrXV:252853-254086 1.0000 100 chrXI:810-1053 1.0000 100 chrXIII:808019-808547 1.0000 100 chrX:617707-617807 1.0000 100 chrXIII:754458-755464 1.0000 100 chrXII:544031-545712 1.0000 100 chrXIII:222574-223903 1.0000 100 chrVIII:556604-556767 1.0000 100 chrIII:14481-16923 1.0000 100 chrXVI:172882-174100 1.0000 100 chrXVI:214912-215104 1.0000 100 chrIV:1161514-1162378 1.0000 100 chrV:42140-42647 1.0000 100 chrIV:1301808-1302605 1.0000 100 chrXIV:413585-416253 1.0000 100 chrXI:38753-39219 1.0000 100 chrXVI:860130-860683 1.0000 100 chrIV:1441454-1442965 1.0000 100 chrXI:83976-84442 1.0000 100 chrIV:538846-539268 1.0000 100 chrIX:370217-370661 1.0000 100 chrV:299259-301442 1.0000 100 chrXII:88195-88442 1.0000 100 chrXIV:771816-772388 1.0000 100 chrVIII:381439-382770 1.0000 100 chrXV:853985-854794 1.0000 100 chrXIV:392334-392717 1.0000 100 chrV:288149-288748 1.0000 100 chrX:424273-424373 1.0000 100 chrXII:951042-953642 1.0000 100 chrIV:465199-465519 1.0000 100 chrVI:64012-65383 1.0000 100 chrVIII:451356-453044 1.0000 100 chrI:28592-28901 1.0000 100 chrXIV:495204-495940 1.0000 100 chrIV:340252-341635 1.0000 100 chrIV:1351888-1353400 1.0000 100 chrXV:968106-968418 1.0000 100 chrXIV:715952-716642 1.0000 100 chrII:444743-445374 1.0000 100 chrXII:231966-234239 1.0000 100 chrIV:410150-410785 1.0000 100 chrXIV:444459-444806 1.0000 100 chrXII:809854-815747 1.0000 100 chrXII:656835-657208 1.0000 100 chrIV:1461459-1461841 1.0000 100 chrII:642863-643252 1.0000 100 chrIV:381718-384805 1.0000 100 chrIV:83433-83821 1.0000 100 chrXIII:145798-146274 1.0000 100 chrV:138452-140898 1.0000 100 chrVIII:214140-214352 1.0000 100 chrXII:262843-264054 1.0000 100 chrIX:323989-324376 1.0000 100 chrX:172746-172846 1.0000 100 chrV:550966-551577 1.0000 100 chrIV:599808-600173 1.0000 100 chrXVI:692846-695034 1.0000 100 chrXV:407599-408225 1.0000 100 chrXIV:96076-96528 1.0000 100 chrXIII:91384-92089 1.0000 100 chrX:523874-523974 1.0000 100 chrI:166174-166598 1.0000 100 chrV:130831-131368 1.0000 100 chrX:510620-510720 1.0000 100 chrIV:490586-491248 1.0000 100 chrXVI:520020-520527 1.0000 100 chrII:395599-397904 1.0000 100 chrVII:736200-736875 1.0000 100 chrXIII:914914-915377 1.0000 100 chrXVI:451747-453214 1.0000 100 chrXVI:75036-75287 1.0000 100 chrVII:364890-366720 1.0000 100 chrVII:483381-483652 1.0000 100 chrIV:913942-914850 1.0000 100 chrX:608322-608422 1.0000 100 chrII:405648-406244 1.0000 100 chrXVI:678892-679313 1.0000 100 chrXI:67808-68395 1.0000 100 chrXII:713151-713529 1.0000 100 chrXV:571739-572142 1.0000 100 chrXII:369662-370276 1.0000 100 chrVIII:410999-411730 1.0000 100 chrVII:920960-921755 1.0000 100 chrIX:325743-326216 1.0000 100 chrVII:930868-931652 1.0000 100 chrXV:1003956-1004997 1.0000 100 chrXII:97582-97845 1.0000 100 chrVII:700402-701237 1.0000 100 chrXIV:602099-602563 1.0000 100 chrVIII:148977-149264 1.0000 100 chrXI:614791-615208 1.0000 100 chrXV:159221-160191 1.0000 100 chrXII:611433-612031 1.0000 100 chrVII:205288-206311 1.0000 100 chrXV:1029255-1029509 1.0000 100 chrVII:533845-535176 1.0000 100 chrIX:380165-380883 1.0000 100 chrVI:226391-226960 1.0000 100 chrVII:422861-423350 1.0000 100 chrXIII:161956-162695 1.0000 100 chrXV:274478-274985 1.0000 100 chrVII:794184-794557 1.0000 100 chrXII:167738-168257 1.0000 100 chrXI:99778-99982 1.0000 100 chrVII:397938-398156 1.0000 100 chrXIII:625828-627507 1.0000 100 chrXV:340130-340602 1.0000 100 chrX:355183-355283 1.0000 100 chrXIII:650701-652970 1.0000 100 chrVIII:388678-389002 1.0000 100 chrXI:333626-334975 1.0000 100 chrXV:216287-216707 1.0000 100 chrXV:160347-160724 1.0000 100 chrXI:513183-513616 1.0000 100 chrXI:140656-141483 1.0000 100 chrVI:191057-191775 1.0000 100 chrIV:1269921-1271058 1.0000 100 chrV:434384-435158 1.0000 100 chrX:415768-415868 1.0000 100 chrXI:307943-308510 1.0000 100 chrII:167551-168212 1.0000 100 chrV:378007-379219 1.0000 100 chrXIII:499029-500764 1.0000 100 chrX:390819-390919 1.0000 100 chrVII:401412-401614 1.0000 100 chrVII:738889-739582 1.0000 100 chrIII:295316-296031 1.0000 100 chrVIII:133968-135049 1.0000 100 chrX:607910-608010 1.0000 100 chrII:544624-544793 1.0000 100 chrXV:300891-301481 1.0000 100 chrXII:734582-734983 1.0000 100 chrVIII:382932-383633 1.0000 100 chrIV:525622-527366 1.0000 100 chrIX:141811-142510 1.0000 100 chrXII:636683-640002 1.0000 100 chrIV:992683-993215 1.0000 100 chrXIV:721210-723197 1.0000 100 chrVII:882344-884069 1.0000 100 chrXII:731174-732303 1.0000 100 chrIV:491460-492610 1.0000 100 chrXII:448475-448858 1.0000 100 chrXII:704327-704572 1.0000 100 chrV:23438-23821 1.0000 100 chrIX:174864-175513 1.0000 100 chrXV:167972-168472 1.0000 100 chrXIV:301489-302313 1.0000 100 chrXV:710125-710744 1.0000 100 chrXIV:102576-103258 1.0000 100 chrIII:81982-82685 1.0000 100 chrI:180951-181509 1.0000 100 chrVIII:296705-297255 1.0000 100 chrIX:210516-210954 1.0000 100 chrIII:149585-150201 1.0000 100 chrII:413763-415306 1.0000 100 chrV:322054-323431 1.0000 100 chrXIII:463327-464017 1.0000 100 chrVIII:115967-116406 1.0000 100 chrX:204543-204643 1.0000 100 chrXII:921678-923179 1.0000 100 chrX:651215-651315 1.0000 100 chrXIII:407905-408801 1.0000 100 chrIX:197341-197826 1.0000 100 chrIX:25926-26370 1.0000 100 chrXVI:404514-405991 1.0000 100 chrXIV:283131-283469 1.0000 100 chrXV:903970-904650 1.0000 100 chrXV:832352-832815 1.0000 100 chrVII:438574-439935 1.0000 100 chrVI:31791-32235 1.0000 100 chrII:592356-593473 1.0000 100 chrXV:797007-797549 1.0000 100 chrX:120302-120402 1.0000 100 chrXIII:480388-480828 1.0000 100 chrVIII:358291-358804 1.0000 100 chrXIV:330484-331073 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/AWRI1631--CUP9/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/AWRI1631--CUP9/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/AWRI1631--CUP9/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.302 C 0.198 G 0.198 T 0.302 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/AWRI1631--CUP9/background): A 0.309 C 0.191 G 0.191 T 0.309 ******************************************************************************** ******************************************************************************** MOTIF VSSGGRDTCGAACCSSSGAYCYYMN MEME-1 width = 25 sites = 74 llr = 1323 E-value = 5.5e-247 ******************************************************************************** -------------------------------------------------------------------------------- Motif VSSGGRDTCGAACCSSSGAYCYYMN MEME-1 Description -------------------------------------------------------------------------------- Simplified A 3:13:54:::aa::12:26:::143 pos.-specific C 544:::2:8:::a7533:1663553 probability G 3457a52::a::::34581131::3 matrix T :2::::3a2::::3112:2315412 bits 2.4 * * * 2.2 * * * 1.9 * * * 1.7 * * **** * Relative 1.4 * ****** * Entropy 1.2 ** ******* * (25.8 bits) 1.0 **** ******* * 0.7 ****** ******** ** ** 0.5 ****** *********** ***** 0.2 ****** ***************** 0.0 ------------------------- Multilevel CCGGGAATCGAACCCGGGACCTCCC consensus AGCA GT T TGCC TTGCTAA sequence G T G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VSSGGRDTCGAACCSSSGAYCYYMN MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------- chrIII:123369-123810 + 46 1.02e-15 GTGGGGCGAG CCGGGACTCGAACCCGGGACCTCCC GCACCCTAAG chrXII:448475-448858 + 42 1.80e-11 GAAGGTCCTA CCCGGATTCGAACCGGGGTTGTCCG GATCAAAACC chrIII:168107-168541 + 35 1.80e-11 AAAGGTCCTA CCCGGATTCGAACCGGGGTTGTCCG GATCAAAACC chrIV:645009-645368 + 23 1.80e-11 AAAGGTCCTA CCCGGATTCGAACCGGGGTTGTCCG GATCAAAACC chrVII:401412-401614 + 72 3.02e-11 TACTCCGATA CGGGGAGTCGAACCCCGGTCTCCAC GGTG chrXI:140656-141483 + 7 3.02e-11 CCGATA CGGGGAGTCGAACCCCGGTCTCCAC GGTGAAAGCG chrIX:370217-370661 - 67 3.02e-11 ACTCCGATA CGGGGAGTCGAACCCCGGTCTCCAC GGTGAAAGCG chrIV:1016948-1017513 + 35 3.02e-11 AACTCCGAAG CGGGGAGTCGAACCCCGGTCTCCAC GGTGAGAACG chrII:644966-645423 - 62 3.02e-11 AACTCCGATA CGGGGAGTCGAACCCCGGTCTCCAC GGTGAAAGCG chrV:487109-487605 + 32 3.02e-11 TACTCCGATA CGGGGAGTCGAACCCCGGTCTCCAC GGTGAAAGCG chrV:176894-177456 - 13 3.02e-11 TACTCCGATA CGGGGAGTCGAACCCCGGTCTCCAC GGTGAAAGCG chrII:326531-327158 + 6 3.57e-11 TCCAA CCGAGGTTCGAACTCGGGATCTTCG CCGTGTAAAG chrIV:488482-489101 + 64 3.57e-11 TCTGATCCAA CCGAGGTTCGAACTCGGGATCTTCG CCGTGTAAAG chrIX:210516-210954 - 21 4.95e-11 TATGGTCTCT AGCGGGATCGAACCGCTGATCCCCG CGTTATTAGC chrXIV:602099-602563 - 72 4.95e-11 CTCT AGCGGGATCGAACCGCTGATCCCCG CGTTATTAGC chrV:130831-131368 + 41 4.95e-11 ATAGGTCTTA CCCGGATTCGAACCGGGGTTGTTCG GATCAAAACC chrV:550966-551577 + 72 4.95e-11 AATGGTCTCT AGCGGGATCGAACCGCTGATCCCCG CGTT chrXIV:569698-570147 + 3 4.95e-11 CT AGCGGGATCGAACCGCTGATCCCCG CGTTATTAGC chrXII:1051915-1052220 + 62 4.95e-11 AATGGTCTCT AGCGGGATCGAACCGCTGATCCCCG CGTTATTAGC chrXVI:819319-819851 - 35 4.95e-11 AATGGTCTCT AGCGGGATCGAACCGCTGATCCCCG CGTTATTAGC chrVIII:475483-475906 + 70 1.07e-10 AATGTTCCAA CCGAGGATCGAACTCGGGACCTTTG CCGTGT chrIV:83433-83821 - 9 1.25e-10 CTTGCGCAAG CCCGGAATCGAACCGGGGGCCCAAC GATGGCAA chrXVI:860130-860683 - 61 1.25e-10 TCTGCGCAAG CCCGGAATCGAACCGGGGGCCCAAC GATGGCAACG chrX:531569-531669 - 10 1.25e-10 ACTGCGCAAG CCCGGAATCGAACCGGGGGCCCAAC GATGGCAAC chrXV:281834-282625 - 23 1.25e-10 AATGCGCAAG CCCGGAATCGAACCGGGGGCCCAAC GATGGCAACG chrX:396522-396622 + 22 1.25e-10 AATGCGCAAG CCCGGAATCGAACCGGGGGCCCAAC GATGGCAACG chrVII:779410-779921 - 40 1.67e-10 CTTGAGCGGT ACGAGAATCGAACCCGTGTCCCCAC CTTGGAAGGG chrX:378214-378314 - 60 2.21e-10 ATTGATTTCG CCCAGGATCGAACTGGGGACGTTCT GCGTGTTAAG chrV:438517-439013 - 26 2.21e-10 ATTGATTTCG CCCAGGATCGAACTGGGGACGTTCT GCGTGTTAAG chrVII:823342-823696 - 54 2.21e-10 AATGATTTCG CCCAGGATCGAACTGGGGACGTTCT GCGTGTTAAG chrXIII:420290-420858 + 72 2.21e-10 AATGATTTCG CCCAGGATCGAACTGGGGACGTTCT GCGT chrV:469249-469727 - 60 2.21e-10 AATGATTTCG CCCAGGATCGAACTGGGGACGTTCT GCGTGTTAAG chrXIII:808019-808547 + 21 3.33e-10 GAAGGTCCCA CCCGGATTCGAACTGGGGTTGTTCG GATCAGAACC chrXIII:480388-480828 + 71 1.32e-09 GAAGCCCTGT AGGGGGCTCGAACCCCTAACCTTAT GATTA chrVI:226391-226960 + 71 1.32e-09 TAAGCCCTGT AGGGGGCTCGAACCCCTAACCTTAT GATTA chrIX:300005-300498 + 35 1.32e-09 ATAGCCCTGT AGGGGGCTCGAACCCCTAACCTTAT GATTAAGAGT chrVII:185489-185912 + 72 1.32e-09 ATAGCCCTGT AGGGGGCTCGAACCCCTAACCTTAT GATT chrXV:300891-301481 - 30 1.86e-09 AGGGGGCGAG CTGGGAATTGAACCCAGGGCCTCTC GCATGCTTTG chrXIII:195937-196301 + 7 1.86e-09 GGCGAG CTGGGAATTGAACCCAGGGCCTCTC GCATGCTTTG chrX:390819-390919 + 9 2.32e-09 TGCTCCAG GGGAGGTTCGAACTCTCGACCTTCA GATTATGAGA chrIV:1175611-1176101 - 63 2.32e-09 AATGCTCCAG GGGAGGTTCGAACTCTCGACCTTCA GATTATGAGA chrXIII:572620-573181 + 41 2.32e-09 TGTGCTCCAG GGGAGGTTCGAACTCTCGACCTTCA GATTATGAGA chrX:422670-422770 - 66 2.32e-09 TGTGCTCCAG GGGAGGTTCGAACTCTCGACCTTCA GATTATGAGA chrIV:884265-884637 - 60 2.59e-09 AGTGCTCGAG GTGGGGTTTGAACCCACGACGGTCG CGTTGCTTTT chrVII:115329-115737 - 68 7.22e-09 CTCCTCAT AGGGGGCTCGAACCCCTGACATTTC GGTATCCTTG chrXVI:768996-769482 + 26 7.22e-09 AACTCCTCAT AGGGGGCTCGAACCCCTGACATTTC GGTATCCTTG chrXV:353892-354300 + 3 1.16e-08 CA ATCGGATTTGAACCGATGATCTCCA CATTACTAGT chrII:266201-266705 - 15 1.16e-08 AATGCTTCCA ATCGGATTTGAACCGATGATCTCCA CATTACTAGT chrII:405648-406244 - 21 1.39e-08 AGCACTCACG ATGGGGGTCGAACCCATAATCTTCT GATTAGAAGT chrX:374203-374303 + 27 1.39e-08 AGCACTCACG ATGGGGGTCGAACCCATAATCTTCT GATTAGAAGT chrIV:946146-946648 - 21 2.53e-08 AATCTCCCGG GGGCGAGTCGAACGCCCGATCTCAA GATTTCGTAG chrVI:167250-167688 - 74 2.53e-08 GG GGGCGAGTCGAACGCCCGATCTCAA GATTTCGTAG chrV:492204-492553 + 32 2.99e-08 TCCTTCCCCG CCAGGACTTGAACCTGGAATCTTCT GGTTCGTAGC chrIV:619697-620229 + 64 2.99e-08 ATCTTCCCCG CCAGGACTTGAACCTGGAATCTTCT GGTTCGTAGC chrX:204543-204643 - 24 3.51e-08 ATCTCCGCGA CGGGGAATTGAACCCCGATCTGGCA CGCGACAAGC chrVII:544289-544917 + 32 3.51e-08 ATCTCCGCGA CGGGGAATTGAACCCCGATCTGGCA CGCGACAAGC chrXII:426866-427503 - 37 3.51e-08 TTCTCCGCGA CGGGGAATTGAACCCCGATCTGGCA CGCGACAAGC chrXIII:320981-321332 + 49 3.79e-08 AATGGACGAG TCCGGAATCGAACCGGAGACCTCTC CCATGCTAAG chrXII:167738-168257 + 5 4.10e-08 AACT GCAGGACTCGAACCTGCGCGGGCAA AGCCCAAAAG chrIV:437534-438113 - 48 4.10e-08 GACGACAACT GCAGGACTCGAACCTGCGCGGGCAA AGCCCAAAAG chrIV:980741-981219 + 52 4.10e-08 AACGACAACT GCAGGACTCGAACCTGCGCGGGCAA AGCCCAAAAG chrII:9358-9995 - 8 4.78e-08 ACTGAAGGAT GCGAGGTTCGAACTCGCGCGGACAA CCGTCCA chrIV:519659-519909 - 60 4.78e-08 ATTGAAGGAT GCGAGGTTCGAACTCGCGCGGACAA CCGTCCAACA chrXIV:374683-375123 - 74 6.44e-08 CT CTGTGGATCGAACACAGGACCTCCA GATGACTTGA chrXI:302703-303244 - 68 8.57e-08 TGAAACGG ACAGGAATTGAACCTGCAACCCTTC GATTGCAATC chrXIV:632406-632938 - 18 8.57e-08 AACGACCCCA GTGAGGGTTGAACTCACGATCTTGC GATTAACAGT chrVII:730956-731435 - 33 8.57e-08 AACGACCCCA GTGAGGGTTGAACTCACGATCTTGC GATTAACAGT chrIII:127574-127904 - 68 8.57e-08 CGACCCCA GTGAGGGTTGAACTCACGATCTTGC GATTAACAGT chrV:288149-288748 + 53 1.13e-07 AACGACACCA GCAGGATTTGAACCAGCGCGGGCAG AGCCCAACAG chrXVI:689392-689841 - 48 1.13e-07 TACGACACCA GCAGGATTTGAACCAGCGCGGGCAG AGCCCAACAG chrIX:248514-249290 - 47 1.13e-07 AACGACACCA GCAGGATTTGAACCAGCGCGGGCAG AGCCCAACAG chrII:642863-643252 + 8 2.12e-07 GCTCGCA CTCAGGATCGAACTAAGGACCAACA GATTTGCAAT chrXVI:744069-744640 - 19 2.68e-07 TTTGCCACCT GTCAGAATTGAACTAACGACCTTTG CATTACAAGT chrXV:274478-274985 - 60 3.75e-07 TGCGTCACAG ACAGGATTCGAACCTGCGCAGGTAA AACCCAATGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VSSGGRDTCGAACCSSSGAYCYYMN MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:123369-123810 1e-15 45_[+1]_30 chrXII:448475-448858 1.8e-11 41_[+1]_34 chrIII:168107-168541 1.8e-11 34_[+1]_41 chrIV:645009-645368 1.8e-11 22_[+1]_53 chrVII:401412-401614 3e-11 71_[+1]_4 chrXI:140656-141483 3e-11 6_[+1]_69 chrIX:370217-370661 3e-11 66_[-1]_9 chrIV:1016948-1017513 3e-11 34_[+1]_41 chrII:644966-645423 3e-11 61_[-1]_14 chrV:487109-487605 3e-11 31_[+1]_44 chrV:176894-177456 3e-11 12_[-1]_63 chrII:326531-327158 3.6e-11 5_[+1]_70 chrIV:488482-489101 3.6e-11 63_[+1]_12 chrIX:210516-210954 5e-11 20_[-1]_55 chrXIV:602099-602563 5e-11 71_[-1]_4 chrV:130831-131368 5e-11 40_[+1]_35 chrV:550966-551577 5e-11 71_[+1]_4 chrXIV:569698-570147 5e-11 2_[+1]_73 chrXII:1051915-1052220 5e-11 61_[+1]_14 chrXVI:819319-819851 5e-11 34_[-1]_41 chrVIII:475483-475906 1.1e-10 69_[+1]_6 chrIV:83433-83821 1.2e-10 8_[-1]_67 chrXVI:860130-860683 1.2e-10 60_[-1]_15 chrX:531569-531669 1.2e-10 9_[-1]_66 chrXV:281834-282625 1.2e-10 22_[-1]_53 chrX:396522-396622 1.2e-10 21_[+1]_54 chrVII:779410-779921 1.7e-10 39_[-1]_36 chrX:378214-378314 2.2e-10 59_[-1]_16 chrV:438517-439013 2.2e-10 25_[-1]_50 chrVII:823342-823696 2.2e-10 53_[-1]_22 chrXIII:420290-420858 2.2e-10 71_[+1]_4 chrV:469249-469727 2.2e-10 59_[-1]_16 chrXIII:808019-808547 3.3e-10 20_[+1]_55 chrXIII:480388-480828 1.3e-09 70_[+1]_5 chrVI:226391-226960 1.3e-09 70_[+1]_5 chrIX:300005-300498 1.3e-09 34_[+1]_41 chrVII:185489-185912 1.3e-09 71_[+1]_4 chrXV:300891-301481 1.9e-09 29_[-1]_46 chrXIII:195937-196301 1.9e-09 6_[+1]_69 chrX:390819-390919 2.3e-09 8_[+1]_67 chrIV:1175611-1176101 2.3e-09 62_[-1]_13 chrXIII:572620-573181 2.3e-09 40_[+1]_35 chrX:422670-422770 2.3e-09 65_[-1]_10 chrIV:884265-884637 2.6e-09 59_[-1]_16 chrVII:115329-115737 7.2e-09 67_[-1]_8 chrXVI:768996-769482 7.2e-09 25_[+1]_50 chrXV:353892-354300 1.2e-08 2_[+1]_73 chrII:266201-266705 1.2e-08 14_[-1]_61 chrII:405648-406244 1.4e-08 20_[-1]_55 chrX:374203-374303 1.4e-08 26_[+1]_49 chrIV:946146-946648 2.5e-08 20_[-1]_55 chrVI:167250-167688 2.5e-08 73_[-1]_2 chrV:492204-492553 3e-08 31_[+1]_44 chrIV:619697-620229 3e-08 63_[+1]_12 chrX:204543-204643 3.5e-08 23_[-1]_52 chrVII:544289-544917 3.5e-08 31_[+1]_44 chrXII:426866-427503 3.5e-08 36_[-1]_39 chrXIII:320981-321332 3.8e-08 48_[+1]_27 chrXII:167738-168257 4.1e-08 4_[+1]_71 chrIV:437534-438113 4.1e-08 47_[-1]_28 chrIV:980741-981219 4.1e-08 51_[+1]_24 chrII:9358-9995 4.8e-08 7_[-1]_68 chrIV:519659-519909 4.8e-08 59_[-1]_16 chrXIV:374683-375123 6.4e-08 73_[-1]_2 chrXI:302703-303244 8.6e-08 67_[-1]_8 chrXIV:632406-632938 8.6e-08 17_[-1]_58 chrVII:730956-731435 8.6e-08 32_[-1]_43 chrIII:127574-127904 8.6e-08 67_[-1]_8 chrV:288149-288748 1.1e-07 52_[+1]_23 chrXVI:689392-689841 1.1e-07 47_[-1]_28 chrIX:248514-249290 1.1e-07 46_[-1]_29 chrII:642863-643252 2.1e-07 7_[+1]_68 chrXVI:744069-744640 2.7e-07 18_[-1]_57 chrXV:274478-274985 3.7e-07 59_[-1]_16 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VSSGGRDTCGAACCSSSGAYCYYMN MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF VSSGGRDTCGAACCSSSGAYCYYMN width=25 seqs=74 chrIII:123369-123810 ( 46) CCGGGACTCGAACCCGGGACCTCCC 1 chrXII:448475-448858 ( 42) CCCGGATTCGAACCGGGGTTGTCCG 1 chrIII:168107-168541 ( 35) CCCGGATTCGAACCGGGGTTGTCCG 1 chrIV:645009-645368 ( 23) CCCGGATTCGAACCGGGGTTGTCCG 1 chrVII:401412-401614 ( 72) CGGGGAGTCGAACCCCGGTCTCCAC 1 chrXI:140656-141483 ( 7) CGGGGAGTCGAACCCCGGTCTCCAC 1 chrIX:370217-370661 ( 67) CGGGGAGTCGAACCCCGGTCTCCAC 1 chrIV:1016948-1017513 ( 35) CGGGGAGTCGAACCCCGGTCTCCAC 1 chrII:644966-645423 ( 62) CGGGGAGTCGAACCCCGGTCTCCAC 1 chrV:487109-487605 ( 32) CGGGGAGTCGAACCCCGGTCTCCAC 1 chrV:176894-177456 ( 13) CGGGGAGTCGAACCCCGGTCTCCAC 1 chrII:326531-327158 ( 6) CCGAGGTTCGAACTCGGGATCTTCG 1 chrIV:488482-489101 ( 64) CCGAGGTTCGAACTCGGGATCTTCG 1 chrIX:210516-210954 ( 21) AGCGGGATCGAACCGCTGATCCCCG 1 chrXIV:602099-602563 ( 72) AGCGGGATCGAACCGCTGATCCCCG 1 chrV:130831-131368 ( 41) CCCGGATTCGAACCGGGGTTGTTCG 1 chrV:550966-551577 ( 72) AGCGGGATCGAACCGCTGATCCCCG 1 chrXIV:569698-570147 ( 3) AGCGGGATCGAACCGCTGATCCCCG 1 chrXII:1051915-1052220 ( 62) AGCGGGATCGAACCGCTGATCCCCG 1 chrXVI:819319-819851 ( 35) AGCGGGATCGAACCGCTGATCCCCG 1 chrVIII:475483-475906 ( 70) CCGAGGATCGAACTCGGGACCTTTG 1 chrIV:83433-83821 ( 9) CCCGGAATCGAACCGGGGGCCCAAC 1 chrXVI:860130-860683 ( 61) CCCGGAATCGAACCGGGGGCCCAAC 1 chrX:531569-531669 ( 10) CCCGGAATCGAACCGGGGGCCCAAC 1 chrXV:281834-282625 ( 23) CCCGGAATCGAACCGGGGGCCCAAC 1 chrX:396522-396622 ( 22) CCCGGAATCGAACCGGGGGCCCAAC 1 chrVII:779410-779921 ( 40) ACGAGAATCGAACCCGTGTCCCCAC 1 chrX:378214-378314 ( 60) CCCAGGATCGAACTGGGGACGTTCT 1 chrV:438517-439013 ( 26) CCCAGGATCGAACTGGGGACGTTCT 1 chrVII:823342-823696 ( 54) CCCAGGATCGAACTGGGGACGTTCT 1 chrXIII:420290-420858 ( 72) CCCAGGATCGAACTGGGGACGTTCT 1 chrV:469249-469727 ( 60) CCCAGGATCGAACTGGGGACGTTCT 1 chrXIII:808019-808547 ( 21) CCCGGATTCGAACTGGGGTTGTTCG 1 chrXIII:480388-480828 ( 71) AGGGGGCTCGAACCCCTAACCTTAT 1 chrVI:226391-226960 ( 71) AGGGGGCTCGAACCCCTAACCTTAT 1 chrIX:300005-300498 ( 35) AGGGGGCTCGAACCCCTAACCTTAT 1 chrVII:185489-185912 ( 72) AGGGGGCTCGAACCCCTAACCTTAT 1 chrXV:300891-301481 ( 30) CTGGGAATTGAACCCAGGGCCTCTC 1 chrXIII:195937-196301 ( 7) CTGGGAATTGAACCCAGGGCCTCTC 1 chrX:390819-390919 ( 9) GGGAGGTTCGAACTCTCGACCTTCA 1 chrIV:1175611-1176101 ( 63) GGGAGGTTCGAACTCTCGACCTTCA 1 chrXIII:572620-573181 ( 41) GGGAGGTTCGAACTCTCGACCTTCA 1 chrX:422670-422770 ( 66) GGGAGGTTCGAACTCTCGACCTTCA 1 chrIV:884265-884637 ( 60) GTGGGGTTTGAACCCACGACGGTCG 1 chrVII:115329-115737 ( 68) AGGGGGCTCGAACCCCTGACATTTC 1 chrXVI:768996-769482 ( 26) AGGGGGCTCGAACCCCTGACATTTC 1 chrXV:353892-354300 ( 3) ATCGGATTTGAACCGATGATCTCCA 1 chrII:266201-266705 ( 15) ATCGGATTTGAACCGATGATCTCCA 1 chrII:405648-406244 ( 21) ATGGGGGTCGAACCCATAATCTTCT 1 chrX:374203-374303 ( 27) ATGGGGGTCGAACCCATAATCTTCT 1 chrIV:946146-946648 ( 21) GGGCGAGTCGAACGCCCGATCTCAA 1 chrVI:167250-167688 ( 74) GGGCGAGTCGAACGCCCGATCTCAA 1 chrV:492204-492553 ( 32) CCAGGACTTGAACCTGGAATCTTCT 1 chrIV:619697-620229 ( 64) CCAGGACTTGAACCTGGAATCTTCT 1 chrX:204543-204643 ( 24) CGGGGAATTGAACCCCGATCTGGCA 1 chrVII:544289-544917 ( 32) CGGGGAATTGAACCCCGATCTGGCA 1 chrXII:426866-427503 ( 37) CGGGGAATTGAACCCCGATCTGGCA 1 chrXIII:320981-321332 ( 49) TCCGGAATCGAACCGGAGACCTCTC 1 chrXII:167738-168257 ( 5) GCAGGACTCGAACCTGCGCGGGCAA 1 chrIV:437534-438113 ( 48) GCAGGACTCGAACCTGCGCGGGCAA 1 chrIV:980741-981219 ( 52) GCAGGACTCGAACCTGCGCGGGCAA 1 chrII:9358-9995 ( 8) GCGAGGTTCGAACTCGCGCGGACAA 1 chrIV:519659-519909 ( 60) GCGAGGTTCGAACTCGCGCGGACAA 1 chrXIV:374683-375123 ( 74) CTGTGGATCGAACACAGGACCTCCA 1 chrXI:302703-303244 ( 68) ACAGGAATTGAACCTGCAACCCTTC 1 chrXIV:632406-632938 ( 18) GTGAGGGTTGAACTCACGATCTTGC 1 chrVII:730956-731435 ( 33) GTGAGGGTTGAACTCACGATCTTGC 1 chrIII:127574-127904 ( 68) GTGAGGGTTGAACTCACGATCTTGC 1 chrV:288149-288748 ( 53) GCAGGATTTGAACCAGCGCGGGCAG 1 chrXVI:689392-689841 ( 48) GCAGGATTTGAACCAGCGCGGGCAG 1 chrIX:248514-249290 ( 47) GCAGGATTTGAACCAGCGCGGGCAG 1 chrII:642863-643252 ( 8) CTCAGGATCGAACTAAGGACCAACA 1 chrXVI:744069-744640 ( 19) GTCAGAATTGAACTAACGACCTTTG 1 chrXV:274478-274985 ( 60) ACAGGATTCGAACCTGCGCAGGTAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VSSGGRDTCGAACCSSSGAYCYYMN MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 25 n= 45600 bayes= 10.1392 E= 5.5e-247 -27 131 43 -451 -1285 122 99 -82 -119 88 143 -1285 -19 -282 185 -451 -1285 -1285 239 -1285 81 -1285 127 -1285 29 -23 -1 -19 -1285 -1285 -1285 169 -1285 199 -1285 -35 -1285 -1285 239 -1285 169 -1285 -1285 -1285 169 -1285 -1285 -1285 -1285 239 -1285 -1285 -451 185 -282 -19 -219 143 77 -171 -82 77 122 -252 -451 57 131 -43 -93 -1285 213 -1285 88 -65 -101 -52 -451 154 -82 7 -351 157 50 -119 -293 50 -36 81 -193 127 -223 44 29 131 -223 -152 -27 70 43 -82 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VSSGGRDTCGAACCSSSGAYCYYMN MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 25 nsites= 74 E= 5.5e-247 0.256757 0.472973 0.256757 0.013514 0.000000 0.445946 0.378378 0.175676 0.135135 0.351351 0.513514 0.000000 0.270270 0.027027 0.689189 0.013514 0.000000 0.000000 1.000000 0.000000 0.540541 0.000000 0.459459 0.000000 0.378378 0.162162 0.189189 0.270270 0.000000 0.000000 0.000000 1.000000 0.000000 0.756757 0.000000 0.243243 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.013514 0.689189 0.027027 0.270270 0.067568 0.513514 0.324324 0.094595 0.175676 0.324324 0.445946 0.054054 0.013514 0.283784 0.472973 0.229730 0.162162 0.000000 0.837838 0.000000 0.567568 0.121622 0.094595 0.216216 0.013514 0.554054 0.108108 0.324324 0.027027 0.567568 0.270270 0.135135 0.040541 0.270270 0.148649 0.540541 0.081081 0.459459 0.040541 0.418919 0.378378 0.472973 0.040541 0.108108 0.256757 0.310811 0.256757 0.175676 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VSSGGRDTCGAACCSSSGAYCYYMN MEME-1 regular expression -------------------------------------------------------------------------------- [CAG][CG][GC][GA]G[AG][AT]T[CT]GAAC[CT][CG][GC][GCT]G[AT][CT][CG][TC][CT][CA][CAG] -------------------------------------------------------------------------------- Time 353.54 secs. ******************************************************************************** ******************************************************************************** MOTIF TRGYYYAGTGGKTWRARSS MEME-2 width = 19 sites = 80 llr = 1095 E-value = 1.1e-143 ******************************************************************************** -------------------------------------------------------------------------------- Motif TRGYYYAGTGGKTWRARSS MEME-2 Description -------------------------------------------------------------------------------- Simplified A :4:::1a2:1::26463:: pos.-specific C :::553:::1::2:12:54 probability G :6a:22:8:6a41:32635 matrix T a::534::a3:66421121 bits 2.4 * * 2.2 * * 1.9 * * 1.7 * * ** * Relative 1.4 * * *** * Entropy 1.2 *** *** * (19.7 bits) 1.0 **** *** ** * 0.7 ***** ****** * *** 0.5 ***** ****** * *** 0.2 ******************* 0.0 ------------------- Multilevel TGGCCTAGTGGTTAAAGCG consensus A TTC T GCTGCAGC sequence GG T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRGYYYAGTGGKTWRARSS MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------- chrXII:167738-168257 - 53 3.15e-10 TATGGCAACT TGGCCGAGTGGTTAAGGCG AAAGATTAGA chrXVI:689392-689841 + 6 3.15e-10 CACTA TGGCCGAGTGGTTAAGGCG ACAGACTTGA chrIV:437534-438113 + 6 3.15e-10 CAACT TGGCCGAGTGGTTAAGGCG AAAGATTAGA chrIX:248514-249290 + 5 3.15e-10 ACTA TGGCCGAGTGGTTAAGGCG ACAGACTTGA chrIV:1305406-1305841 + 64 3.15e-10 TAAGGCAACT TGGCCGAGTGGTTAAGGCG AAAGATTAGA chrXIII:259016-259443 - 35 3.15e-10 TATGGCAACT TGGCCGAGTGGTTAAGGCG AAAGATTAGA chrIV:1150730-1151181 - 11 3.15e-10 TCAGTCCCAG TGGCCGAGTGGTTAAGGCG ATGCCTGCTA chrX:617707-617807 + 49 7.11e-10 AATGGGAGTT TGGCCGAGTGGTTTAAGGC GTCAGATTTA chrX:424273-424373 - 48 2.29e-09 GATGGAGGGT TGGCCGAGTGGTCTAAGGC GGCAGACTTA chrIV:519659-519909 + 16 2.29e-09 TACGGAGGGT TGGCCGAGTGGTCTAAGGC GGCAGACTTA chrXII:962813-963311 - 18 2.29e-09 GACGGAGGGT TGGCCGAGTGGTCTAAGGC GGCAGACTTA chrXII:734582-734983 + 77 3.51e-09 TTTGGTCTCT TGGCCCAGTTGGTTAAGGC ACCGT chrXIV:602099-602563 + 38 3.51e-09 AATGGTCTCT TGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXIV:569698-570147 - 43 3.51e-09 AGTGGTCTCT TGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrIX:183305-183699 - 36 3.51e-09 CCTGGTCTCT TGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrII:197176-197832 + 47 3.51e-09 CAAGGTCTCT TGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXVI:819319-819851 + 1 3.51e-09 . TGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrVII:115329-115737 + 12 9.07e-09 TCATCCTTGT TAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrIV:359360-359785 + 62 9.07e-09 TCATCCTTGT TAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXII:875180-875646 + 20 9.07e-09 TCATCCTTGT TAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXII:656835-657208 - 10 1.53e-08 ATTGGGCGTG TGGCGTAGTCGGTAGCGCG CTCCCTTAG chrVIII:115967-116406 - 18 2.47e-08 AGAGCTTCTA TGGCCAAGTTGGTAAGGCG CCACACTAGT chrXV:353892-354300 - 42 2.47e-08 ACTGCTTCTA TGGCCAAGTTGGTAAGGCG CCACACTAGT chrIII:127574-127904 + 34 3.88e-08 AATGACTCCA TGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXI:74413-74855 + 47 3.88e-08 TTAGACTCCA TGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXI:83976-84442 + 56 7.72e-08 TATGGAGGGT TGGCCGAGTGGTCTAATGC GGCAGACTTA chrVIII:358291-358804 - 47 1.27e-07 TAAGCGGATT TAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXIV:374683-375123 + 23 1.27e-07 TAAGCGGACT TAGCTCAGTTGGGAGAGCG CCAGACTGAA chrVII:440464-441168 - 16 1.27e-07 TATGCGGATT TAGCTCAGTTGGGAGAGCG CCAGACTGAA chrIX:300005-300498 - 74 2.03e-07 AGCCTTGT TGGCGCAATCGGTAGCGCG TATGACTCTT chrV:435632-436010 - 28 2.03e-07 AGAGCCTTGT TGGCGCAATCGGTAGCGCG TATGACTCTT chrXV:340130-340602 - 30 2.27e-07 CTGTTCCTCG TGGCCCAATGGTCACGGCG TCTGGCTACG chrXI:490751-491204 + 48 2.27e-07 TTGTTCCTCG TGGCCCAATGGTCACGGCG TCTGGCTACG chrV:492204-492553 - 71 2.27e-07 CTATTCCTCG TGGCCCAATGGTCACGGCG TCTGGCTACG chrXI:307943-308510 - 16 3.11e-07 AGTGGTTTCG TGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXVI:860130-860683 + 30 3.11e-07 CAAGCGCAAG TGGTTTAGTGGTAAAATCC AACGTTGCCA chrX:378214-378314 + 26 3.11e-07 ATAGGTTTCG TGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXV:226446-226894 - 36 3.11e-07 TCAGCGCAAG TGGTTTAGTGGTAAAATCC AACGTTGCCA chrVII:823342-823696 + 20 3.11e-07 AGTGGTTTCG TGGTCTAGTCGGTTATGGC ATCTGCTTAA chrX:396522-396622 - 59 3.11e-07 TAAGCGCAAG TGGTTTAGTGGTAAAATCC AACGTTGCCA chrXV:663522-664252 - 23 3.11e-07 AGTGGTTTCG TGGTCTAGTCGGTTATGGC ATCTGCTTAA chrV:469249-469727 + 26 3.11e-07 ATTGGTTTCG TGGTCTAGTCGGTTATGGC ATCTGCTTAA chrX:390819-390919 - 48 3.82e-07 AGTGCTTCAG TAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrIV:1175611-1176101 + 30 3.82e-07 AAAGCTTCAG TAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrXIII:572620-573181 - 80 3.82e-07 AG TAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrX:422670-422770 + 33 3.82e-07 TATGCTTCAG TAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrVII:422861-423350 + 44 4.21e-07 AGTGGTTGTT TGGCCGAGCGGTCTAAGGC GCCTGATTCA chrIV:1256852-1257293 - 32 4.21e-07 TTAGCGAAAG TGGTTCAGTGGTTAGAATT CATGCTTCCC chrVI:167250-167688 + 25 6.14e-07 CGACTCTCGG TAGCCAAGTTGGTTTAAGG CGCAAGACTG chrXIII:837695-838200 + 38 6.14e-07 TGACTCTCGG TAGCCAAGTTGGTTTAAGG CGCAAGACTG chrVI:210458-210933 - 37 6.14e-07 CGACTCTCGG TAGCCAAGTTGGTTTAAGG CGCAAGACTG chrX:353995-354095 + 58 6.14e-07 TCACTCTCGG TAGCCAAGTTGGTTTAAGG CGCAAGACTG chrI:138975-139363 + 40 6.72e-07 TACGGGCGTG TGGTCTAGTGGTATGATTC TCGCTTTGGG chrXIII:195937-196301 - 76 6.72e-07 GGCGTG TGGTCTAGTGGTATGATTC TCGCTTTGGG chrXV:464282-464659 + 37 6.72e-07 CAAGGGCGTG TGGTCTAGTGGTATGATTC TCGCTTTGGG chrIII:72-1024 - 49 6.72e-07 GGGTAAGCGG TAGTGGAGTTGGATACGGG TAATTGGAGG chrXIV:96076-96528 - 35 8.01e-07 CATGGGCGGT TAGTGTAGTGGTTATCATC CCACCCTTCC chrVII:779410-779921 + 8 8.01e-07 GGGCGGT TAGTGTAGTGGTTATCATC CCACCCTTCC chrXV:110850-111208 - 29 8.01e-07 CCCGGGCGGT TAGTGTAGTGGTTATCATC CCACCCTTCC chrXII:448475-448858 - 80 8.72e-07 TA TAGTGTAGTGGTTATCACT TTCGGTTTTG chrV:130831-131368 - 79 8.72e-07 TTA TAGTGTAGTGGTTATCACT TTCGGTTTTG chrXIII:808019-808547 - 59 8.72e-07 AAAGGTCCTA TAGTGTAGTGGTTATCACT TTCGGTTCTG chrII:350606-351041 + 61 8.72e-07 AAGGGTTTTA TAGTGTAGTGGTTATCACT TTCGGTTTTG chrIII:168107-168541 - 73 8.72e-07 CTGGTCCTA TAGTGTAGTGGTTATCACT TTCGGTTTTG chrIV:645009-645368 - 61 8.72e-07 TACGGTCCTA TAGTGTAGTGGTTATCACT TTCGGTTTTG chrIV:802571-803010 - 37 8.72e-07 GTCGGTCCTA TAGTGTAGTGGTTATCACT TTCGGTTTTG chrIV:520742-521181 + 68 8.72e-07 TAGGGTCCTA TAGTGTAGTGGTTATCACT TTCGGTTTTG chrXI:513183-513616 - 29 1.76e-06 CGTTCCGTGA TAGTTTAATGGTCAGAATG GGCGCTTGTC chrX:355183-355283 + 46 1.76e-06 TCTTCCGTGA TAGTTTAATGGTCAGAATG GGCGCTTGTC chrXV:571739-572142 + 75 1.76e-06 AAATCCGTGA TAGTTTAATGGTCAGAATG GGCGCTT chrII:405648-406244 + 71 1.76e-06 TCTTCCGTGA TAGTTTAATGGTCAGAATG GGCGCTTGTC chrIV:568668-569282 + 46 1.76e-06 TCTTCCGTGA TAGTTTAATGGTCAGAATG GGCGCTTGTC chrVII:544289-544917 - 70 1.76e-06 TCTTCCGTGA TAGTTTAATGGTCAGAATG GGCGCTTGTC chrVII:531421-531800 + 57 1.76e-06 ACTTCCGTGA TAGTTTAATGGTCAGAATG GGCGCTTGTC chrXII:426866-427503 + 5 1.76e-06 GTGA TAGTTTAATGGTCAGAATG GGCGCTTGTC chrVIII:556604-556767 + 26 2.03e-06 AGGGTAATGG TAGTGGAGTTGGATATGGG TAATTGGAGG chrII:326531-327158 - 46 2.03e-06 CCGGGTCCAA TGGTCCAGTGGTTCAAGAC GTCGCCTTTA chrIII:316232-316591 + 60 4.56e-06 GGGAGTGGTA TGGTTGAGTGGGGCAGGGT AACGAGTGGG chrXIV:631712-632141 - 16 6.58e-06 ACCGGGCGTG TGGTCTAGAGGTATGATTC TCGCTTAGGG chrXVI:188366-189073 + 74 6.91e-06 GAAGGAGAAC TGGTGTAGAGGTTTCCGGT CTTAATGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRGYYYAGTGGKTWRARSS MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:167738-168257 3.1e-10 52_[-2]_29 chrXVI:689392-689841 3.1e-10 5_[+2]_76 chrIV:437534-438113 3.1e-10 5_[+2]_76 chrIX:248514-249290 3.1e-10 4_[+2]_77 chrIV:1305406-1305841 3.1e-10 63_[+2]_18 chrXIII:259016-259443 3.1e-10 34_[-2]_47 chrIV:1150730-1151181 3.1e-10 10_[-2]_71 chrX:617707-617807 7.1e-10 48_[+2]_33 chrX:424273-424373 2.3e-09 47_[-2]_34 chrIV:519659-519909 2.3e-09 15_[+2]_66 chrXII:962813-963311 2.3e-09 17_[-2]_64 chrXII:734582-734983 3.5e-09 76_[+2]_5 chrXIV:602099-602563 3.5e-09 37_[+2]_44 chrXIV:569698-570147 3.5e-09 42_[-2]_39 chrIX:183305-183699 3.5e-09 35_[-2]_46 chrII:197176-197832 3.5e-09 46_[+2]_35 chrXVI:819319-819851 3.5e-09 [+2]_81 chrVII:115329-115737 9.1e-09 11_[+2]_70 chrIV:359360-359785 9.1e-09 61_[+2]_20 chrXII:875180-875646 9.1e-09 19_[+2]_62 chrXII:656835-657208 1.5e-08 9_[-2]_72 chrVIII:115967-116406 2.5e-08 17_[-2]_64 chrXV:353892-354300 2.5e-08 41_[-2]_40 chrIII:127574-127904 3.9e-08 33_[+2]_48 chrXI:74413-74855 3.9e-08 46_[+2]_35 chrXI:83976-84442 7.7e-08 55_[+2]_26 chrVIII:358291-358804 1.3e-07 46_[-2]_35 chrXIV:374683-375123 1.3e-07 22_[+2]_59 chrVII:440464-441168 1.3e-07 15_[-2]_66 chrIX:300005-300498 2e-07 73_[-2]_8 chrV:435632-436010 2e-07 27_[-2]_54 chrXV:340130-340602 2.3e-07 29_[-2]_52 chrXI:490751-491204 2.3e-07 47_[+2]_34 chrV:492204-492553 2.3e-07 70_[-2]_11 chrXI:307943-308510 3.1e-07 15_[-2]_66 chrXVI:860130-860683 3.1e-07 29_[+2]_52 chrX:378214-378314 3.1e-07 25_[+2]_56 chrXV:226446-226894 3.1e-07 35_[-2]_46 chrVII:823342-823696 3.1e-07 19_[+2]_62 chrX:396522-396622 3.1e-07 58_[-2]_23 chrXV:663522-664252 3.1e-07 22_[-2]_59 chrV:469249-469727 3.1e-07 25_[+2]_56 chrX:390819-390919 3.8e-07 47_[-2]_34 chrIV:1175611-1176101 3.8e-07 29_[+2]_52 chrXIII:572620-573181 3.8e-07 79_[-2]_2 chrX:422670-422770 3.8e-07 32_[+2]_49 chrVII:422861-423350 4.2e-07 43_[+2]_38 chrIV:1256852-1257293 4.2e-07 31_[-2]_50 chrVI:167250-167688 6.1e-07 24_[+2]_57 chrXIII:837695-838200 6.1e-07 37_[+2]_44 chrVI:210458-210933 6.1e-07 36_[-2]_45 chrX:353995-354095 6.1e-07 57_[+2]_24 chrI:138975-139363 6.7e-07 39_[+2]_42 chrXIII:195937-196301 6.7e-07 75_[-2]_6 chrXV:464282-464659 6.7e-07 36_[+2]_45 chrIII:72-1024 6.7e-07 48_[-2]_33 chrXIV:96076-96528 8e-07 34_[-2]_47 chrVII:779410-779921 8e-07 7_[+2]_74 chrXV:110850-111208 8e-07 28_[-2]_53 chrXII:448475-448858 8.7e-07 79_[-2]_2 chrV:130831-131368 8.7e-07 78_[-2]_3 chrXIII:808019-808547 8.7e-07 58_[-2]_23 chrII:350606-351041 8.7e-07 60_[+2]_21 chrIII:168107-168541 8.7e-07 72_[-2]_9 chrIV:645009-645368 8.7e-07 60_[-2]_21 chrIV:802571-803010 8.7e-07 36_[-2]_45 chrIV:520742-521181 8.7e-07 67_[+2]_14 chrXI:513183-513616 1.8e-06 28_[-2]_53 chrX:355183-355283 1.8e-06 45_[+2]_36 chrXV:571739-572142 1.8e-06 74_[+2]_7 chrII:405648-406244 1.8e-06 70_[+2]_11 chrIV:568668-569282 1.8e-06 45_[+2]_36 chrVII:544289-544917 1.8e-06 69_[-2]_12 chrVII:531421-531800 1.8e-06 56_[+2]_25 chrXII:426866-427503 1.8e-06 4_[+2]_77 chrVIII:556604-556767 2e-06 25_[+2]_56 chrII:326531-327158 2e-06 45_[-2]_36 chrIII:316232-316591 4.6e-06 59_[+2]_22 chrXIV:631712-632141 6.6e-06 15_[-2]_66 chrXVI:188366-189073 6.9e-06 73_[+2]_8 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRGYYYAGTGGKTWRARSS MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TRGYYYAGTGGKTWRARSS width=19 seqs=80 chrXII:167738-168257 ( 53) TGGCCGAGTGGTTAAGGCG 1 chrXVI:689392-689841 ( 6) TGGCCGAGTGGTTAAGGCG 1 chrIV:437534-438113 ( 6) TGGCCGAGTGGTTAAGGCG 1 chrIX:248514-249290 ( 5) TGGCCGAGTGGTTAAGGCG 1 chrIV:1305406-1305841 ( 64) TGGCCGAGTGGTTAAGGCG 1 chrXIII:259016-259443 ( 35) TGGCCGAGTGGTTAAGGCG 1 chrIV:1150730-1151181 ( 11) TGGCCGAGTGGTTAAGGCG 1 chrX:617707-617807 ( 49) TGGCCGAGTGGTTTAAGGC 1 chrX:424273-424373 ( 48) TGGCCGAGTGGTCTAAGGC 1 chrIV:519659-519909 ( 16) TGGCCGAGTGGTCTAAGGC 1 chrXII:962813-963311 ( 18) TGGCCGAGTGGTCTAAGGC 1 chrXII:734582-734983 ( 77) TGGCCCAGTTGGTTAAGGC 1 chrXIV:602099-602563 ( 38) TGGCCCAGTTGGTTAAGGC 1 chrXIV:569698-570147 ( 43) TGGCCCAGTTGGTTAAGGC 1 chrIX:183305-183699 ( 36) TGGCCCAGTTGGTTAAGGC 1 chrII:197176-197832 ( 47) TGGCCCAGTTGGTTAAGGC 1 chrXVI:819319-819851 ( 1) TGGCCCAGTTGGTTAAGGC 1 chrVII:115329-115737 ( 12) TAGCTCAGTTGGTAGAGCG 1 chrIV:359360-359785 ( 62) TAGCTCAGTTGGTAGAGCG 1 chrXII:875180-875646 ( 20) TAGCTCAGTTGGTAGAGCG 1 chrXII:656835-657208 ( 10) TGGCGTAGTCGGTAGCGCG 1 chrVIII:115967-116406 ( 18) TGGCCAAGTTGGTAAGGCG 1 chrXV:353892-354300 ( 42) TGGCCAAGTTGGTAAGGCG 1 chrIII:127574-127904 ( 34) TGGCCAAGTTGGTTAAGGC 1 chrXI:74413-74855 ( 47) TGGCCAAGTTGGTTAAGGC 1 chrXI:83976-84442 ( 56) TGGCCGAGTGGTCTAATGC 1 chrVIII:358291-358804 ( 47) TAGCTCAGTTGGGAGAGCG 1 chrXIV:374683-375123 ( 23) TAGCTCAGTTGGGAGAGCG 1 chrVII:440464-441168 ( 16) TAGCTCAGTTGGGAGAGCG 1 chrIX:300005-300498 ( 74) TGGCGCAATCGGTAGCGCG 1 chrV:435632-436010 ( 28) TGGCGCAATCGGTAGCGCG 1 chrXV:340130-340602 ( 30) TGGCCCAATGGTCACGGCG 1 chrXI:490751-491204 ( 48) TGGCCCAATGGTCACGGCG 1 chrV:492204-492553 ( 71) TGGCCCAATGGTCACGGCG 1 chrXI:307943-308510 ( 16) TGGTCTAGTCGGTTATGGC 1 chrXVI:860130-860683 ( 30) TGGTTTAGTGGTAAAATCC 1 chrX:378214-378314 ( 26) TGGTCTAGTCGGTTATGGC 1 chrXV:226446-226894 ( 36) TGGTTTAGTGGTAAAATCC 1 chrVII:823342-823696 ( 20) TGGTCTAGTCGGTTATGGC 1 chrX:396522-396622 ( 59) TGGTTTAGTGGTAAAATCC 1 chrXV:663522-664252 ( 23) TGGTCTAGTCGGTTATGGC 1 chrV:469249-469727 ( 26) TGGTCTAGTCGGTTATGGC 1 chrX:390819-390919 ( 48) TAGCTCAGTAGGAAGAGCG 1 chrIV:1175611-1176101 ( 30) TAGCTCAGTAGGAAGAGCG 1 chrXIII:572620-573181 ( 80) TAGCTCAGTAGGAAGAGCG 1 chrX:422670-422770 ( 33) TAGCTCAGTAGGAAGAGCG 1 chrVII:422861-423350 ( 44) TGGCCGAGCGGTCTAAGGC 1 chrIV:1256852-1257293 ( 32) TGGTTCAGTGGTTAGAATT 1 chrVI:167250-167688 ( 25) TAGCCAAGTTGGTTTAAGG 1 chrXIII:837695-838200 ( 38) TAGCCAAGTTGGTTTAAGG 1 chrVI:210458-210933 ( 37) TAGCCAAGTTGGTTTAAGG 1 chrX:353995-354095 ( 58) TAGCCAAGTTGGTTTAAGG 1 chrI:138975-139363 ( 40) TGGTCTAGTGGTATGATTC 1 chrXIII:195937-196301 ( 76) TGGTCTAGTGGTATGATTC 1 chrXV:464282-464659 ( 37) TGGTCTAGTGGTATGATTC 1 chrIII:72-1024 ( 49) TAGTGGAGTTGGATACGGG 1 chrXIV:96076-96528 ( 35) TAGTGTAGTGGTTATCATC 1 chrVII:779410-779921 ( 8) TAGTGTAGTGGTTATCATC 1 chrXV:110850-111208 ( 29) TAGTGTAGTGGTTATCATC 1 chrXII:448475-448858 ( 80) TAGTGTAGTGGTTATCACT 1 chrV:130831-131368 ( 79) TAGTGTAGTGGTTATCACT 1 chrXIII:808019-808547 ( 59) TAGTGTAGTGGTTATCACT 1 chrII:350606-351041 ( 61) TAGTGTAGTGGTTATCACT 1 chrIII:168107-168541 ( 73) TAGTGTAGTGGTTATCACT 1 chrIV:645009-645368 ( 61) TAGTGTAGTGGTTATCACT 1 chrIV:802571-803010 ( 37) TAGTGTAGTGGTTATCACT 1 chrIV:520742-521181 ( 68) TAGTGTAGTGGTTATCACT 1 chrXI:513183-513616 ( 29) TAGTTTAATGGTCAGAATG 1 chrX:355183-355283 ( 46) TAGTTTAATGGTCAGAATG 1 chrXV:571739-572142 ( 75) TAGTTTAATGGTCAGAATG 1 chrII:405648-406244 ( 71) TAGTTTAATGGTCAGAATG 1 chrIV:568668-569282 ( 46) TAGTTTAATGGTCAGAATG 1 chrVII:544289-544917 ( 70) TAGTTTAATGGTCAGAATG 1 chrVII:531421-531800 ( 57) TAGTTTAATGGTCAGAATG 1 chrXII:426866-427503 ( 5) TAGTTTAATGGTCAGAATG 1 chrVIII:556604-556767 ( 26) TAGTGGAGTTGGATATGGG 1 chrII:326531-327158 ( 46) TGGTCCAGTGGTTCAAGAC 1 chrIII:316232-316591 ( 60) TGGTTGAGTGGGGCAGGGT 1 chrXIV:631712-632141 ( 16) TGGTCTAGAGGTATGATTC 1 chrXVI:188366-189073 ( 74) TGGTGTAGAGGTTTCCGGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRGYYYAGTGGKTWRARSS MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 19 n= 49200 bayes= 10.2066 E= 1.1e-143 -1297 -1297 -1297 169 50 -1297 156 -1297 -1297 -1297 239 -1297 -1297 149 -1297 58 -1297 139 16 -10 -163 59 7 42 169 -1297 -1297 -1297 -93 -1297 213 -1297 -363 -393 -1297 164 -263 -93 159 -17 -1297 -1297 239 -1297 -1297 -1297 120 86 -93 7 -193 93 96 -293 -1297 28 50 -193 77 -72 86 7 -23 -204 -4 -1297 165 -163 -462 124 82 -63 -1297 97 135 -117 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRGYYYAGTGGKTWRARSS MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 19 nsites= 80 E= 1.1e-143 0.000000 0.000000 0.000000 1.000000 0.437500 0.000000 0.562500 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.537500 0.000000 0.462500 0.000000 0.500000 0.212500 0.287500 0.100000 0.287500 0.200000 0.412500 1.000000 0.000000 0.000000 0.000000 0.162500 0.000000 0.837500 0.000000 0.025000 0.012500 0.000000 0.962500 0.050000 0.100000 0.575000 0.275000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.437500 0.562500 0.162500 0.200000 0.050000 0.587500 0.600000 0.025000 0.000000 0.375000 0.437500 0.050000 0.325000 0.187500 0.562500 0.200000 0.162500 0.075000 0.300000 0.000000 0.600000 0.100000 0.012500 0.450000 0.337500 0.200000 0.000000 0.375000 0.487500 0.137500 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TRGYYYAGTGGKTWRARSS MEME-2 regular expression -------------------------------------------------------------------------------- T[GA]G[CT][CTG][TCG]AGT[GT]G[TG][TC][AT][AG][AC][GA][CGT][GC] -------------------------------------------------------------------------------- Time 862.26 secs. ******************************************************************************** ******************************************************************************** MOTIF TNHWTTTTTTTYTTYTTTTYT MEME-3 width = 21 sites = 98 llr = 1018 E-value = 1.9e-050 ******************************************************************************** -------------------------------------------------------------------------------- Motif TNHWTTTTTTTYTTYTTTTYT MEME-3 Description -------------------------------------------------------------------------------- Simplified A 1333:1:::111::131::11 pos.-specific C :331:22212231:3:23152 probability G 23:2::::::::1:::1:112 matrix T 7244a88898768a6777725 bits 2.4 2.2 1.9 1.7 Relative 1.4 * * * Entropy 1.2 * * * (15.0 bits) 1.0 * *** ** 0.7 * ******* ** * ** 0.5 * *************** 0.2 *** ***************** 0.0 --------------------- Multilevel TGTTTTTTTTTTTTTTTTTCT consensus GACA CC CC CA C TG sequence CA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TNHWTTTTTTTYTTYTTTTYT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXII:704327-704572 + 50 3.18e-10 ACTTTTTTTT TCATTTTTTTTTTTCTTTTCT CCTCCATCTA chrII:415571-415896 + 79 5.49e-09 ATAAAGTTTT TCCTTTTTTTTTTTTTTTTTC T chrX:58683-58783 - 79 1.33e-08 T TAATTTTTTTTTTTTTTTTTT TTTCACGCTC chrXIV:444459-444806 + 66 1.66e-08 CGTAGAAAAT TGACTTTTTTTTTTTTTTTGT TATTTTCTGT chrIV:928581-930280 - 68 2.46e-08 AACGCTTGAG TGCTTTTTTTTTTTCATTTCA AACAAGAATA chrII:478967-479575 - 49 4.37e-08 AGCAGCTTTT TCCATTTTTTTTTTTTTTGTT TCAAGTAACG chrXVI:678892-679313 + 14 5.23e-08 TACTTTAAAG TATTTTCTTTCTTTTTTTTCC TGCTACTTAC chrXIV:568052-568662 - 1 5.23e-08 GAGTATTAAT GCATTTTTTTTTTTTATCTCC chrVIII:214140-214352 + 61 8.83e-08 CATGAATAGC TTTTTTTTTTTTTTTTATTCG AAATCTGGGG chrVII:736200-736875 - 65 1.44e-07 GTGGAGGAAG TAACTTTTTTTTTTTTTTTAT AAATTTATAC chrXV:1003956-1004997 + 56 1.97e-07 AATATTTTAC TTCATTTTTTTTTTCTGTTCT CGCTTGGCTT chrII:44799-45363 + 38 1.97e-07 AATATTGTTG GGCTTTCCTTTTTTTTTTCCT TCCACGTCTA chrXVI:338480-339115 - 77 2.66e-07 AAT TTATTTTTTTCTTTTTACTCT TCATTTTTTT chrIX:248514-249290 + 80 3.56e-07 GCTGGTGTCG TTATTTTTTTTTTTTTATTTT chrIV:1488935-1489944 + 44 4.10e-07 CCTTCCAACA TATTTTTTTTCCTTCTTTGGT CCCTTCAAGG chrXII:1011725-1012506 + 31 4.10e-07 TCTTGCTGTT TCTTTTTCTTTGTTTTCTTCT CCAATCCTTG chrXIII:362945-363372 - 45 4.10e-07 TGTCGTTTGT TGCCTTCCCTTTTTCTTTTCT TTGAAAAAAA chrIV:1016948-1017513 - 10 4.72e-07 TCCCCGCTTC GGAGTTTCTTTTTTATTTTCT AGAAAAATT chrVII:706944-707180 - 29 4.72e-07 TTTTTTTGAA GATGTTCTTTTTTTTTTTTTG GGCCTCATTA chrXI:158233-159654 - 10 6.19e-07 TTAGTAAACT TCCTTTTTTCTCCTCATCTCG GTGCAGAAT chrVII:364017-364411 - 19 6.19e-07 TAATTGGCTT TATTTTCTTCTCTTTTTTTTC ACATGCGCAG chrIV:358089-358514 + 23 7.06e-07 TGTACACCAA GGTATTTTTTTTTTTACTTGG CAGATCTGCA chrVI:226391-226960 - 46 8.05e-07 CCCCCTACAG GGCTTATCTCTTTTTTTCTCT AACAAAAAAA chrXIII:145798-146274 + 19 8.05e-07 CCCTTCTGGG TTCTTTTCTTCCTTTTCTTGT TTACCTTTTT chrVII:695588-697202 - 13 8.05e-07 CTTTTCTTGT TCCTTTTCTTGTTTCTTTTCT TGTTCTTCCT chrXVI:188366-189073 - 37 8.05e-07 CTTCTGCAAG GGTTTTCTTTTTTTATTTTTT TTGATGGGAT chrXII:1028173-1028561 + 15 1.18e-06 CTTCATGTCC TACCTTTTTTCCTTCTTTCTT CCTTGTCTTA chrIV:1301808-1302605 + 58 1.50e-06 TACTTCACGT TATATTCTTTTTTTTTACTGT TGCAGCAAAT chrVII:401412-401614 - 2 1.69e-06 TCCGTGAAGA AAATTTTTTTTCTTCATTTCG G chrXI:355877-356497 + 6 1.69e-06 TTTTC TTCTTTTGTTTTTTTATTTCG ATATTTAGTT chrVII:1057157-1057455 + 20 1.69e-06 ATTTGTTGCA TGATTTTTCTCTTTTATTTAT TTATATGTTG chrXI:67808-68395 - 45 1.91e-06 AGTTATTTTC TATATTTTTATTTTTTTTTTG CCACTGACCA chrII:395599-397904 + 3 1.91e-06 CG TCAGTTTCCTCCTTTTCTTCT TGGACTTCTG chrIV:83433-83821 + 46 2.14e-06 TGCGCAAGTT TAATTTTTTTTCTTTTTCCAC ATTGTTTTCC chrIX:138561-139141 + 45 2.40e-06 AGGAAGTATT TACTTTTTCTTCTTCTTTACT ATGGAAATAG chrXVI:810582-811263 - 36 2.40e-06 CGCGATACTA GATTTTTTTTTATTTATTTAT TTCTGAACTT chrVII:544289-544917 - 5 2.40e-06 CCCGTCGCGG AGATTTTTTTCTTTTTCTGCT CTTC chrXVI:821620-822223 + 30 2.69e-06 ATTCTGATTC TTTTTTCTTTCATTCTTTTGT TGTTTTTGAC chrIV:541203-541908 - 47 3.00e-06 TTGCTGATTT TCTTTTTTCTTATTCTTCTTG TGCTTCATCC chrX:531569-531669 + 40 3.00e-06 CCGGGCTTGC GCAGTTTCTTTTCTTTTTTTC TGGAAAATAA chrXIII:320981-321332 - 24 3.35e-06 TCCGGACTCG TCCATTTTTTATTTTTTTGGC TAACTAACCC chrV:51832-53155 - 13 3.73e-06 GATTATACCC TCCGTTTTTTTGTTTTTTCAT TTTTATCATT chrXIV:632406-632938 + 47 4.16e-06 CCTCACTGGG GTCGTTTTTTTTCTTATTTCA GATAGTCTTG chrXIV:575109-576140 - 34 4.16e-06 TATAAAGCGG GAATTTTTTTTTTTCTATGCA TTTAGACTGG chrIV:434036-435119 + 44 4.62e-06 GTTATTATTT TATCTTCTTTCCTTTTATGCG TTGTCATTCA chrXVI:559939-560288 + 74 4.62e-06 TGGCTCTATT TATTTTTCTTTCTTCAACTTG CAAGAG chrIX:231825-232352 + 32 4.62e-06 CATTACAGCA GTACTTTTTTTTTTATTCTTT CCAACCCTGG chrX:348846-348946 + 74 5.13e-06 AATTTCGATG GAAATTTTTATCTTCATTTCG ATAGTA chrVII:147955-149561 + 71 5.13e-06 ATGGGCGACT TCCTTCTTTTTCTTTAGTTAG TGTGAACTC chrVI:221761-222064 - 13 5.13e-06 CCTTTCCGGC TCCAACTTTCTTTTTTTTTCG AAAATGATGA chrXIII:914914-915377 - 49 5.68e-06 ATATCGCAAG GGTTTTTTTCTTTTGTCTTAT TCGAGTAATT chrIV:490586-491248 - 8 5.68e-06 ATGCTATATT TAATTCTTCTTTTTCTTGTCT TTACTAG chrVII:121891-122843 + 22 5.68e-06 CCCCTACAGG GCTATTCTTTTTTTGTTCTAT ATGAACAGAG chrXIV:715952-716642 + 2 6.29e-06 G TCCATCTTTTTTTTATTTTGA AGGCGTGTAA chrVIII:147622-148762 - 78 6.29e-06 GC TCACTTTTTCCTGTCTCCTCT AACTTTTCTG chrXV:380667-381102 - 60 6.95e-06 AATCTATGTA TGTGATTTTTTCTTTATTCCT TAAAGGAGGA chrIX:177571-178197 + 44 6.95e-06 TCCTGCGCAT TTCGTATTTTTTCTCATCTCT TGGCTCTGGA chrXIII:747738-748188 + 57 6.95e-06 GAGCTAGTCA TATGTTTCTTTCGTCTTTTTC ATCTGATGAC chrI:180951-181509 + 74 8.47e-06 CTTAGCAACC ATTATTTTTTCTTTTTCCTCC TATACT chrXI:333626-334975 - 54 8.47e-06 ATATGTAACC TCTCTCTCTTTTTTCTCTGCA TCAACTTTTT chrVIII:388678-389002 - 78 8.47e-06 TA TAATTTTTTCACTTTTTTGTT CTTTGCAAGA chrXV:79765-80117 + 76 8.47e-06 GTGTTTACAT GGAGTTGCTTTCTTTTTTTGT CTCA chrXI:578748-579586 - 13 8.47e-06 ATTTCAGTTC TAACTTCCTTCCTTTTCTTTC ACTATTAATT chrXII:713151-713529 - 29 9.32e-06 ACATACTAAC TGCTTTTCTTTTTTCCGTTCG AAAAAAAAAA chrXI:21287-21800 + 30 1.03e-05 ACGACTCCAA TGATTTCTTCTTTTCACCCTT TGAACGGCCG chrX:172746-172846 - 75 1.24e-05 GGTCT TGTATTTTTATCTTATTCTTG ATTGTAGAAA chrIV:1086784-1087347 + 71 1.24e-05 CTTAATTGTG TGTATTCTTCCTTTTTGGTCT TTAGTCTCT chrVI:31124-31457 - 10 1.24e-05 AACGTTCTGA GACGTTTCTTTTTTTTTCAGG ACGCCACCC chrXIV:102576-103258 + 4 1.48e-05 GTT TCTCTCTTTTCCTTTAACTGC TTTACTTCTC chrVII:533845-535176 - 21 1.48e-05 TACTAACAAG TATGTTTTTACTTTTTACTTT ATCATAGAAC chrVIII:148977-149264 + 55 1.62e-05 AGAAAGGATG TCAATATTTCTTTTTTACGCG GAAGGTTATA chrXVI:768996-769482 - 1 1.77e-05 CCCCCTATGA GGAGTTCTTTACTTTTTTGCA chrVII:541714-542180 + 23 1.94e-05 CCCGTATCGG AGTGTTCTTTTTCTTACCTCT TGAAAAAGAG chrIII:107151-107772 - 40 1.94e-05 ATACTTATTT TGCTTATTTTTCTTATACTCA GGAAACGTCA chrXIV:413585-416253 + 59 2.11e-05 TAAAATTTTC TCCATTTTTTTATTGATTTTA TTATTTTTTG chrVII:876153-878187 - 24 2.11e-05 TTTCTTCCAC TGTATCTTCTTCGTCTTCTGT ATCTTCCTCT chrVII:986619-987155 - 57 2.11e-05 GTTTGCCTTC GGTATCCCTTTCCTTTCTGCT GTCAATTCTT chrVIII:125915-126308 + 54 2.50e-05 TCCGTACACC TACATCTTTACATTTTTTGCT GTTGCACCTA chrVII:648759-649390 - 59 2.50e-05 TGTTTTCATC GCCTTCTTTTTATTTTTATCC GAAGATCTTT chrXVI:55859-56426 - 55 2.50e-05 TCCGTTTCAA TTAATTTTTTTCCCCATCTCT CATTATATGG chrIV:1450733-1451629 + 65 2.72e-05 CCAAGAAAGT TTAATTTCTCTCCTTATTTGC CGTTTCTATC chrVII:726934-728613 + 54 3.48e-05 TGTACCTTAA TGTATCTCTTTATTCTTCCAG AAAGTTCCTT chrXV:677916-679134 + 69 3.48e-05 TGAAATTCTC GTCTTTCTTCCTTTTTTGTAC ATTTACATCT chrV:288149-288748 - 31 3.77e-05 AAATCCTGCT GGTGTCGTTTTTTTTATTGTT AGAGGTGCCT chrIX:255092-257115 - 53 3.77e-05 AGATTGAATC TTCCTTTTTTATTTCTGTGTT AAATTCTCTA chrXIII:586418-587125 - 45 3.77e-05 CAAAGTTTTC GGAATTTTTATATTTAATTCC TAACATGTTT chrII:87914-88589 + 59 4.08e-05 ATAACAATAT TGCTTTTTTTCTCTGACTTTA ACTAATCGTT chrIX:174864-175513 + 32 4.41e-05 AAAAGATTAT TGTATCTTTTATGTTTTGTCT GGAAAAACAT chrVII:411870-412576 - 7 4.41e-05 TTGGTAGTTG TCCTACTTTCCGTTCTTTTCG TCTTTT chrII:256238-257260 - 65 4.76e-05 TATTTTATTG TGTTTTTGTTCGTTTTTTACT AAAACTGATG chrIV:340252-341635 - 32 5.14e-05 CATAAGCTTA TATTTATTTCCTTTTAACTTC GATAGTCGAA chrXV:423877-424622 - 1 5.14e-05 GAAAAGCTCT TGACTTTTTCTCGCTATCTCG chrXIII:225355-226641 - 18 5.97e-05 TATCGTCATA TGTTTTCTTTAACTTATTTAT TGTATGACTT chrV:166831-167613 - 5 6.92e-05 CTCCTTCTTG TGTGTCTTTCTTTTCACCCGA TACA chrXII:521893-522399 - 2 7.43e-05 GGAAACTCTT TCTCTACTTTCATTCATTTAG A chrXVI:520020-520527 + 37 8.57e-05 CGTTAATTAT ATCATACTTCTCTTCTCCTCT CGTAAAATCG chrII:9358-9995 - 73 1.05e-04 CTGCAAT TGCATTTCCCTATTATTCTAG TTAATAGTAC chrVII:624889-625500 + 55 1.56e-04 CTACCTTTAG TCCATATTTTCTTCTATTACC AGATCCCATC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TNHWTTTTTTTYTTYTTTTYT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:704327-704572 3.2e-10 49_[+3]_30 chrII:415571-415896 5.5e-09 78_[+3]_1 chrX:58683-58783 1.3e-08 78_[-3]_1 chrXIV:444459-444806 1.7e-08 65_[+3]_14 chrIV:928581-930280 2.5e-08 67_[-3]_12 chrII:478967-479575 4.4e-08 48_[-3]_31 chrXVI:678892-679313 5.2e-08 13_[+3]_66 chrXIV:568052-568662 5.2e-08 [-3]_79 chrVIII:214140-214352 8.8e-08 60_[+3]_19 chrVII:736200-736875 1.4e-07 64_[-3]_15 chrXV:1003956-1004997 2e-07 55_[+3]_24 chrII:44799-45363 2e-07 37_[+3]_42 chrXVI:338480-339115 2.7e-07 76_[-3]_3 chrIX:248514-249290 3.6e-07 79_[+3] chrIV:1488935-1489944 4.1e-07 43_[+3]_36 chrXII:1011725-1012506 4.1e-07 30_[+3]_49 chrXIII:362945-363372 4.1e-07 44_[-3]_35 chrIV:1016948-1017513 4.7e-07 9_[-3]_70 chrVII:706944-707180 4.7e-07 28_[-3]_51 chrXI:158233-159654 6.2e-07 9_[-3]_70 chrVII:364017-364411 6.2e-07 18_[-3]_61 chrIV:358089-358514 7.1e-07 22_[+3]_57 chrVI:226391-226960 8e-07 45_[-3]_34 chrXIII:145798-146274 8e-07 18_[+3]_61 chrVII:695588-697202 8e-07 12_[-3]_67 chrXVI:188366-189073 8e-07 36_[-3]_43 chrXII:1028173-1028561 1.2e-06 14_[+3]_65 chrIV:1301808-1302605 1.5e-06 57_[+3]_22 chrVII:401412-401614 1.7e-06 1_[-3]_78 chrXI:355877-356497 1.7e-06 5_[+3]_74 chrVII:1057157-1057455 1.7e-06 19_[+3]_60 chrXI:67808-68395 1.9e-06 44_[-3]_35 chrII:395599-397904 1.9e-06 2_[+3]_77 chrIV:83433-83821 2.1e-06 45_[+3]_34 chrIX:138561-139141 2.4e-06 44_[+3]_35 chrXVI:810582-811263 2.4e-06 35_[-3]_44 chrVII:544289-544917 2.4e-06 4_[-3]_75 chrXVI:821620-822223 2.7e-06 29_[+3]_50 chrIV:541203-541908 3e-06 46_[-3]_33 chrX:531569-531669 3e-06 39_[+3]_40 chrXIII:320981-321332 3.4e-06 23_[-3]_56 chrV:51832-53155 3.7e-06 12_[-3]_67 chrXIV:632406-632938 4.2e-06 46_[+3]_33 chrXIV:575109-576140 4.2e-06 33_[-3]_46 chrIV:434036-435119 4.6e-06 43_[+3]_36 chrXVI:559939-560288 4.6e-06 73_[+3]_6 chrIX:231825-232352 4.6e-06 31_[+3]_48 chrX:348846-348946 5.1e-06 73_[+3]_6 chrVII:147955-149561 5.1e-06 70_[+3]_9 chrVI:221761-222064 5.1e-06 12_[-3]_67 chrXIII:914914-915377 5.7e-06 48_[-3]_31 chrIV:490586-491248 5.7e-06 7_[-3]_72 chrVII:121891-122843 5.7e-06 21_[+3]_58 chrXIV:715952-716642 6.3e-06 1_[+3]_78 chrVIII:147622-148762 6.3e-06 77_[-3]_2 chrXV:380667-381102 7e-06 59_[-3]_20 chrIX:177571-178197 7e-06 43_[+3]_36 chrXIII:747738-748188 7e-06 56_[+3]_23 chrI:180951-181509 8.5e-06 73_[+3]_6 chrXI:333626-334975 8.5e-06 53_[-3]_26 chrVIII:388678-389002 8.5e-06 77_[-3]_2 chrXV:79765-80117 8.5e-06 75_[+3]_4 chrXI:578748-579586 8.5e-06 12_[-3]_67 chrXII:713151-713529 9.3e-06 28_[-3]_51 chrXI:21287-21800 1e-05 29_[+3]_50 chrX:172746-172846 1.2e-05 74_[-3]_5 chrIV:1086784-1087347 1.2e-05 70_[+3]_9 chrVI:31124-31457 1.2e-05 9_[-3]_70 chrXIV:102576-103258 1.5e-05 3_[+3]_76 chrVII:533845-535176 1.5e-05 20_[-3]_59 chrVIII:148977-149264 1.6e-05 54_[+3]_25 chrXVI:768996-769482 1.8e-05 [-3]_79 chrVII:541714-542180 1.9e-05 22_[+3]_57 chrIII:107151-107772 1.9e-05 39_[-3]_40 chrXIV:413585-416253 2.1e-05 58_[+3]_21 chrVII:876153-878187 2.1e-05 23_[-3]_56 chrVII:986619-987155 2.1e-05 56_[-3]_23 chrVIII:125915-126308 2.5e-05 53_[+3]_26 chrVII:648759-649390 2.5e-05 58_[-3]_21 chrXVI:55859-56426 2.5e-05 54_[-3]_25 chrIV:1450733-1451629 2.7e-05 64_[+3]_15 chrVII:726934-728613 3.5e-05 53_[+3]_26 chrXV:677916-679134 3.5e-05 68_[+3]_11 chrV:288149-288748 3.8e-05 30_[-3]_49 chrIX:255092-257115 3.8e-05 52_[-3]_27 chrXIII:586418-587125 3.8e-05 44_[-3]_35 chrII:87914-88589 4.1e-05 58_[+3]_21 chrIX:174864-175513 4.4e-05 31_[+3]_48 chrVII:411870-412576 4.4e-05 6_[-3]_73 chrII:256238-257260 4.8e-05 64_[-3]_15 chrIV:340252-341635 5.1e-05 31_[-3]_48 chrXV:423877-424622 5.1e-05 [-3]_79 chrXIII:225355-226641 6e-05 17_[-3]_62 chrV:166831-167613 6.9e-05 4_[-3]_75 chrXII:521893-522399 7.4e-05 1_[-3]_78 chrXVI:520020-520527 8.6e-05 36_[+3]_43 chrII:9358-9995 0.00011 72_[-3]_7 chrVII:624889-625500 0.00016 54_[+3]_25 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TNHWTTTTTTTYTTYTTTTYT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TNHWTTTTTTTYTTYTTTTYT width=21 seqs=98 chrXII:704327-704572 ( 50) TCATTTTTTTTTTTCTTTTCT 1 chrII:415571-415896 ( 79) TCCTTTTTTTTTTTTTTTTTC 1 chrX:58683-58783 ( 79) TAATTTTTTTTTTTTTTTTTT 1 chrXIV:444459-444806 ( 66) TGACTTTTTTTTTTTTTTTGT 1 chrIV:928581-930280 ( 68) TGCTTTTTTTTTTTCATTTCA 1 chrII:478967-479575 ( 49) TCCATTTTTTTTTTTTTTGTT 1 chrXVI:678892-679313 ( 14) TATTTTCTTTCTTTTTTTTCC 1 chrXIV:568052-568662 ( 1) GCATTTTTTTTTTTTATCTCC 1 chrVIII:214140-214352 ( 61) TTTTTTTTTTTTTTTTATTCG 1 chrVII:736200-736875 ( 65) TAACTTTTTTTTTTTTTTTAT 1 chrXV:1003956-1004997 ( 56) TTCATTTTTTTTTTCTGTTCT 1 chrII:44799-45363 ( 38) GGCTTTCCTTTTTTTTTTCCT 1 chrXVI:338480-339115 ( 77) TTATTTTTTTCTTTTTACTCT 1 chrIX:248514-249290 ( 80) TTATTTTTTTTTTTTTATTTT 1 chrIV:1488935-1489944 ( 44) TATTTTTTTTCCTTCTTTGGT 1 chrXII:1011725-1012506 ( 31) TCTTTTTCTTTGTTTTCTTCT 1 chrXIII:362945-363372 ( 45) TGCCTTCCCTTTTTCTTTTCT 1 chrIV:1016948-1017513 ( 10) GGAGTTTCTTTTTTATTTTCT 1 chrVII:706944-707180 ( 29) GATGTTCTTTTTTTTTTTTTG 1 chrXI:158233-159654 ( 10) TCCTTTTTTCTCCTCATCTCG 1 chrVII:364017-364411 ( 19) TATTTTCTTCTCTTTTTTTTC 1 chrIV:358089-358514 ( 23) GGTATTTTTTTTTTTACTTGG 1 chrVI:226391-226960 ( 46) GGCTTATCTCTTTTTTTCTCT 1 chrXIII:145798-146274 ( 19) TTCTTTTCTTCCTTTTCTTGT 1 chrVII:695588-697202 ( 13) TCCTTTTCTTGTTTCTTTTCT 1 chrXVI:188366-189073 ( 37) GGTTTTCTTTTTTTATTTTTT 1 chrXII:1028173-1028561 ( 15) TACCTTTTTTCCTTCTTTCTT 1 chrIV:1301808-1302605 ( 58) TATATTCTTTTTTTTTACTGT 1 chrVII:401412-401614 ( 2) AAATTTTTTTTCTTCATTTCG 1 chrXI:355877-356497 ( 6) TTCTTTTGTTTTTTTATTTCG 1 chrVII:1057157-1057455 ( 20) TGATTTTTCTCTTTTATTTAT 1 chrXI:67808-68395 ( 45) TATATTTTTATTTTTTTTTTG 1 chrII:395599-397904 ( 3) TCAGTTTCCTCCTTTTCTTCT 1 chrIV:83433-83821 ( 46) TAATTTTTTTTCTTTTTCCAC 1 chrIX:138561-139141 ( 45) TACTTTTTCTTCTTCTTTACT 1 chrXVI:810582-811263 ( 36) GATTTTTTTTTATTTATTTAT 1 chrVII:544289-544917 ( 5) AGATTTTTTTCTTTTTCTGCT 1 chrXVI:821620-822223 ( 30) TTTTTTCTTTCATTCTTTTGT 1 chrIV:541203-541908 ( 47) TCTTTTTTCTTATTCTTCTTG 1 chrX:531569-531669 ( 40) GCAGTTTCTTTTCTTTTTTTC 1 chrXIII:320981-321332 ( 24) TCCATTTTTTATTTTTTTGGC 1 chrV:51832-53155 ( 13) TCCGTTTTTTTGTTTTTTCAT 1 chrXIV:632406-632938 ( 47) GTCGTTTTTTTTCTTATTTCA 1 chrXIV:575109-576140 ( 34) GAATTTTTTTTTTTCTATGCA 1 chrIV:434036-435119 ( 44) TATCTTCTTTCCTTTTATGCG 1 chrXVI:559939-560288 ( 74) TATTTTTCTTTCTTCAACTTG 1 chrIX:231825-232352 ( 32) GTACTTTTTTTTTTATTCTTT 1 chrX:348846-348946 ( 74) GAAATTTTTATCTTCATTTCG 1 chrVII:147955-149561 ( 71) TCCTTCTTTTTCTTTAGTTAG 1 chrVI:221761-222064 ( 13) TCCAACTTTCTTTTTTTTTCG 1 chrXIII:914914-915377 ( 49) GGTTTTTTTCTTTTGTCTTAT 1 chrIV:490586-491248 ( 8) TAATTCTTCTTTTTCTTGTCT 1 chrVII:121891-122843 ( 22) GCTATTCTTTTTTTGTTCTAT 1 chrXIV:715952-716642 ( 2) TCCATCTTTTTTTTATTTTGA 1 chrVIII:147622-148762 ( 78) TCACTTTTTCCTGTCTCCTCT 1 chrXV:380667-381102 ( 60) TGTGATTTTTTCTTTATTCCT 1 chrIX:177571-178197 ( 44) TTCGTATTTTTTCTCATCTCT 1 chrXIII:747738-748188 ( 57) TATGTTTCTTTCGTCTTTTTC 1 chrI:180951-181509 ( 74) ATTATTTTTTCTTTTTCCTCC 1 chrXI:333626-334975 ( 54) TCTCTCTCTTTTTTCTCTGCA 1 chrVIII:388678-389002 ( 78) TAATTTTTTCACTTTTTTGTT 1 chrXV:79765-80117 ( 76) GGAGTTGCTTTCTTTTTTTGT 1 chrXI:578748-579586 ( 13) TAACTTCCTTCCTTTTCTTTC 1 chrXII:713151-713529 ( 29) TGCTTTTCTTTTTTCCGTTCG 1 chrXI:21287-21800 ( 30) TGATTTCTTCTTTTCACCCTT 1 chrX:172746-172846 ( 75) TGTATTTTTATCTTATTCTTG 1 chrIV:1086784-1087347 ( 71) TGTATTCTTCCTTTTTGGTCT 1 chrVI:31124-31457 ( 10) GACGTTTCTTTTTTTTTCAGG 1 chrXIV:102576-103258 ( 4) TCTCTCTTTTCCTTTAACTGC 1 chrVII:533845-535176 ( 21) TATGTTTTTACTTTTTACTTT 1 chrVIII:148977-149264 ( 55) TCAATATTTCTTTTTTACGCG 1 chrXVI:768996-769482 ( 1) GGAGTTCTTTACTTTTTTGCA 1 chrVII:541714-542180 ( 23) AGTGTTCTTTTTCTTACCTCT 1 chrIII:107151-107772 ( 40) TGCTTATTTTTCTTATACTCA 1 chrXIV:413585-416253 ( 59) TCCATTTTTTTATTGATTTTA 1 chrVII:876153-878187 ( 24) TGTATCTTCTTCGTCTTCTGT 1 chrVII:986619-987155 ( 57) GGTATCCCTTTCCTTTCTGCT 1 chrVIII:125915-126308 ( 54) TACATCTTTACATTTTTTGCT 1 chrVII:648759-649390 ( 59) GCCTTCTTTTTATTTTTATCC 1 chrXVI:55859-56426 ( 55) TTAATTTTTTTCCCCATCTCT 1 chrIV:1450733-1451629 ( 65) TTAATTTCTCTCCTTATTTGC 1 chrVII:726934-728613 ( 54) TGTATCTCTTTATTCTTCCAG 1 chrXV:677916-679134 ( 69) GTCTTTCTTCCTTTTTTGTAC 1 chrV:288149-288748 ( 31) GGTGTCGTTTTTTTTATTGTT 1 chrIX:255092-257115 ( 53) TTCCTTTTTTATTTCTGTGTT 1 chrXIII:586418-587125 ( 45) GGAATTTTTATATTTAATTCC 1 chrII:87914-88589 ( 59) TGCTTTTTTTCTCTGACTTTA 1 chrIX:174864-175513 ( 32) TGTATCTTTTATGTTTTGTCT 1 chrVII:411870-412576 ( 7) TCCTACTTTCCGTTCTTTTCG 1 chrII:256238-257260 ( 65) TGTTTTTGTTCGTTTTTTACT 1 chrIV:340252-341635 ( 32) TATTTATTTCCTTTTAACTTC 1 chrXV:423877-424622 ( 1) TGACTTTTTCTCGCTATCTCG 1 chrXIII:225355-226641 ( 18) TGTTTTCTTTAACTTATTTAT 1 chrV:166831-167613 ( 5) TGTGTCTTTCTTTTCACCCGA 1 chrXII:521893-522399 ( 2) TCTCTACTTTCATTCATTTAG 1 chrXVI:520020-520527 ( 37) ATCATACTTCTCTTCTCCTCT 1 chrII:9358-9995 ( 73) TGCATTTCCCTATTATTCTAG 1 chrVII:624889-625500 ( 55) TCCATATTTTCTTCTATTACC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TNHWTTTTTTTYTTYTTTTYT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 48000 bayes= 9.40294 E= 1.9e-050 -260 -1326 30 121 -28 42 78 -92 -6 82 -1326 25 -22 -52 -22 50 -334 -1326 -1326 165 -192 -32 -1326 131 -1326 10 -322 133 -1326 10 -322 133 -1326 -122 -1326 157 -234 -5 -1326 129 -234 36 -422 114 -146 58 -222 86 -1326 -90 -190 145 -1326 -264 -1326 165 -211 68 -222 91 -6 -422 -1326 117 -122 -22 -190 108 -492 63 -222 108 -292 -122 -42 125 -122 133 -42 -34 -160 -14 23 69 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TNHWTTTTTTTYTTYTTTTYT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 98 E= 1.9e-050 0.051020 0.000000 0.234694 0.714286 0.255102 0.255102 0.326531 0.163265 0.295918 0.336735 0.000000 0.367347 0.265306 0.132653 0.163265 0.438776 0.030612 0.000000 0.000000 0.969388 0.081633 0.153061 0.000000 0.765306 0.000000 0.204082 0.020408 0.775510 0.000000 0.204082 0.020408 0.775510 0.000000 0.081633 0.000000 0.918367 0.061224 0.183673 0.000000 0.755102 0.061224 0.244898 0.010204 0.683673 0.112245 0.285714 0.040816 0.561224 0.000000 0.102041 0.051020 0.846939 0.000000 0.030612 0.000000 0.969388 0.071429 0.306122 0.040816 0.581633 0.295918 0.010204 0.000000 0.693878 0.132653 0.163265 0.051020 0.653061 0.010204 0.295918 0.040816 0.653061 0.040816 0.081633 0.142857 0.734694 0.132653 0.479592 0.142857 0.244898 0.102041 0.173469 0.224490 0.500000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TNHWTTTTTTTYTTYTTTTYT MEME-3 regular expression -------------------------------------------------------------------------------- [TG][GAC][TCA][TA]TT[TC][TC]TT[TC][TC]TT[TC][TA]T[TC]T[CT][TG] -------------------------------------------------------------------------------- Time 1174.27 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:301186-301931 5.24e-01 100 chrVIII:34388-36156 4.02e-02 100 chrXV:28406-30848 1.61e-01 100 chrVI:221761-222064 6.37e-03 12_[-3(5.13e-06)]_67 chrXI:74413-74855 3.43e-04 46_[+2(3.88e-08)]_35 chrI:142150-143676 7.12e-02 8_[-2(8.16e-05)]_73 chrIV:1256852-1257293 1.25e-03 31_[-2(4.21e-07)]_50 chrXVI:821620-822223 1.47e-02 29_[+3(2.69e-06)]_50 chrXIII:549711-551194 5.92e-01 100 chrVII:405467-405909 5.89e-01 100 chrVII:319246-320125 3.28e-01 100 chrXI:219577-220111 9.25e-01 100 chrIV:570856-573458 8.83e-01 100 chrIII:127574-127904 7.56e-09 33_[+2(3.88e-08)]_15_[-1(8.57e-08)]_\ 8 chrXVI:303089-304350 5.55e-01 100 chrIV:976098-976472 8.25e-02 100 chrXI:382206-382449 2.80e-01 100 chrIX:231825-232352 9.15e-03 31_[+3(4.62e-06)]_48 chrXIV:546579-547357 6.08e-01 100 chrIV:884265-884637 4.00e-06 59_[-1(2.59e-09)]_16 chrXII:253887-255092 1.19e-01 100 chrII:87914-88589 3.94e-02 58_[+3(4.08e-05)]_21 chrII:255050-255751 4.32e-01 100 chrXI:325977-327582 1.51e-01 100 chrXVI:55859-56426 3.00e-02 54_[-3(2.50e-05)]_25 chrVII:328383-329211 8.03e-01 100 chrXV:677916-679134 7.27e-02 68_[+3(3.48e-05)]_11 chrXI:578748-579586 4.95e-03 12_[-3(8.47e-06)]_67 chrVII:766139-766458 3.75e-01 100 chrXV:779695-780978 5.38e-01 100 chrXII:1017717-1019421 3.26e-01 100 chrV:61047-62175 2.02e-01 100 chrXVI:559939-560288 9.99e-03 73_[+3(4.62e-06)]_6 chrII:478967-479575 1.61e-04 5_[-3(2.50e-05)]_22_[-3(4.37e-08)]_\ 31 chrIV:619697-620229 2.37e-04 63_[+1(2.99e-08)]_12 chrXV:619635-624452 5.53e-01 100 chrIV:835768-836253 6.32e-01 100 chrXIII:726969-731141 8.81e-01 100 chrVI:180662-181255 1.06e-06 73_[+1(1.25e-10)]_2 chrXII:687646-687828 9.54e-01 100 chrVIII:103260-105521 3.92e-01 100 chrX:422670-422770 6.34e-09 32_[+2(3.82e-07)]_14_[-1(2.32e-09)]_\ 10 chrVII:255210-255655 2.51e-01 100 chrVIII:174731-175729 3.33e-01 100 chrXII:783910-784513 8.62e-01 100 chrXIII:168190-169043 6.41e-01 100 chrXIV:172641-174652 6.65e-01 100 chrXIV:631712-632141 3.70e-03 15_[-2(6.58e-06)]_66 chrVII:364017-364411 2.13e-03 18_[-3(6.19e-07)]_61 chrXVI:768996-769482 6.23e-07 [-3(1.77e-05)]_4_[+1(7.22e-09)]_50 chrXII:962813-963311 1.74e-07 17_[-2(2.29e-09)]_64 chrIV:1450733-1451629 7.29e-02 64_[+3(2.72e-05)]_15 chrXV:520627-520910 5.57e-01 100 chrXIII:162961-164365 5.92e-01 100 chrVII:806172-807759 6.23e-01 100 chrXI:431889-432345 1.51e-01 100 chrX:353995-354095 2.32e-03 57_[+2(6.14e-07)]_24 chrVI:157848-158479 8.61e-01 100 chrXVI:209999-210556 5.44e-01 100 chrVI:53232-54420 3.94e-01 100 chrXI:202348-203304 5.77e-01 100 chrXII:737784-738888 1.88e-01 100 chrXI:519545-521073 3.34e-01 100 chrX:651920-652020 4.86e-01 100 chrV:176894-177456 8.17e-07 12_[-1(3.02e-11)]_63 chrIV:980741-981219 4.52e-05 51_[+1(4.10e-08)]_24 chrVII:121891-122843 7.36e-04 21_[+3(5.68e-06)]_58 chrXIII:302845-303170 4.61e-02 60_[-1(8.50e-05)]_15 chrXIV:88935-89935 8.25e-01 100 chrXII:975705-976189 8.96e-01 100 chrXII:426866-427503 1.07e-07 4_[+2(1.76e-06)]_13_[-1(3.51e-08)]_\ 39 chrVII:914852-915958 4.80e-01 100 chrXI:21287-21800 2.17e-03 29_[+3(1.03e-05)]_50 chrIII:107151-107772 6.88e-02 39_[-3(1.94e-05)]_40 chrXII:919523-921526 3.64e-01 100 chrIII:137755-139010 1.63e-01 9_[-2(9.43e-05)]_72 chrV:270402-270668 9.93e-01 100 chrXII:366024-366549 9.54e-01 100 chrIV:1150730-1151181 4.35e-06 10_[-2(3.15e-10)]_71 chrXII:48706-49252 2.04e-01 100 chrVII:185489-185912 1.51e-06 71_[+1(1.32e-09)]_4 chrXVI:406213-407816 8.55e-01 100 chrVI:31124-31457 2.49e-02 9_[-3(1.24e-05)]_14_[-3(4.76e-05)]_\ 35 chrXIV:628233-629044 8.32e-01 100 chrII:266201-266705 9.12e-06 14_[-1(1.16e-08)]_61 chrXII:282606-283969 1.70e-01 100 chrII:45613-46705 1.76e-01 100 chrXII:837646-839406 8.87e-01 100 chrXV:901450-901646 5.31e-01 100 chrVII:989854-990688 3.27e-02 45_[-3(5.97e-05)]_34 chrVI:210458-210933 3.51e-03 36_[-2(6.14e-07)]_45 chrX:663647-663747 4.23e-01 100 chrXV:978808-979159 4.63e-01 100 chrIV:358089-358514 2.92e-03 22_[+3(7.06e-07)]_57 chrXV:161148-161945 4.44e-01 100 chrVII:702813-703232 1.30e-01 100 chrXVI:188366-189073 1.49e-05 36_[-3(8.05e-07)]_16_[+2(6.91e-06)]_\ 8 chrXII:459601-460728 5.87e-01 100 chrXVI:819319-819851 1.93e-12 [+2(3.51e-09)]_15_[-1(4.95e-11)]_41 chrVIII:237752-238282 8.21e-01 100 chrV:461898-462114 3.65e-01 100 chrII:256238-257260 4.85e-02 64_[-3(4.76e-05)]_15 chrXVI:581704-582302 4.79e-01 100 chrIII:11091-11539 5.01e-01 100 chrXII:242190-243537 8.02e-01 100 chrIII:72-1024 3.75e-03 48_[-2(6.72e-07)]_33 chrIV:411243-411668 4.76e-01 100 chrXVI:927834-928036 2.37e-01 100 chrIII:316232-316591 1.81e-03 59_[+2(4.56e-06)]_22 chrXV:110850-111208 3.50e-03 28_[-2(8.01e-07)]_53 chrXII:1051915-1052220 2.46e-08 61_[+1(4.95e-11)]_14 chrIX:99637-100078 9.11e-01 100 chrV:469249-469727 6.41e-10 25_[+2(3.11e-07)]_15_[-1(2.21e-10)]_\ 16 chrII:415571-415896 2.85e-05 78_[+3(5.49e-09)]_1 chrIX:427272-427770 2.31e-01 100 chrIV:600708-602392 2.60e-02 100 chrXV:505037-505486 5.51e-01 100 chrXII:897710-899735 6.38e-01 100 chrIX:68264-69561 9.97e-01 100 chrXV:409095-409929 2.34e-01 100 chrVII:726934-728613 6.30e-02 53_[+3(3.48e-05)]_26 chrXIII:551361-553191 9.78e-01 100 chrVIII:119713-121685 7.47e-01 100 chrXVI:879123-880571 8.64e-01 100 chrV:362122-362466 6.90e-01 100 chrVII:531421-531800 4.38e-04 56_[+2(1.76e-06)]_25 chrXV:976280-976750 9.58e-02 100 chrXIII:747738-748188 2.86e-03 56_[+3(6.95e-06)]_23 chrXV:842364-842943 1.26e-01 100 chrX:454269-454369 8.37e-01 100 chrVII:648759-649390 4.34e-02 58_[-3(2.50e-05)]_21 chrX:391815-391915 9.30e-01 100 chrXII:592309-592992 4.39e-01 100 chrXII:198366-199735 3.67e-01 100 chrIV:578822-580733 9.90e-01 100 chrXIII:586418-587125 8.22e-02 44_[-3(3.77e-05)]_35 chrXIV:499156-500754 9.77e-01 100 chrIV:1278624-1279052 4.69e-01 100 chrVII:541714-542180 3.05e-02 22_[+3(1.94e-05)]_57 chrII:81454-83803 1.63e-01 100 chrXI:282814-284968 1.59e-03 100 chrV:249776-250539 3.96e-02 50_[+1(9.50e-05)]_25 chrXI:457571-458987 4.87e-01 100 chrXV:663522-664252 1.68e-03 22_[-2(3.11e-07)]_59 chrIV:1162583-1164761 8.28e-01 100 chrXIII:572620-573181 4.56e-09 40_[+1(2.32e-09)]_14_[-2(3.82e-07)]_\ 2 chrVII:479176-482930 3.31e-01 100 chrX:520433-520533 3.93e-01 100 chrXI:7802-8266 5.24e-01 100 chrVII:986619-987155 1.22e-02 56_[-3(2.11e-05)]_23 chrXIV:6822-7006 4.37e-02 6_[-2(7.87e-05)]_75 chrIV:76894-77085 7.14e-01 100 chrXIII:431903-432356 2.08e-01 100 chrII:392950-395326 1.15e-01 100 chrVIII:145727-146459 3.74e-01 100 chrV:250696-250892 9.51e-01 100 chrVII:599347-601394 2.01e-01 100 chrVIII:555104-555432 4.32e-01 100 chrXVI:338480-339115 1.26e-03 76_[-3(2.66e-07)]_3 chrXII:424085-424540 8.55e-01 100 chrVII:1004037-1004420 3.61e-01 100 chrXIII:259016-259443 4.38e-06 34_[-2(3.15e-10)]_47 chrIII:142164-142989 2.08e-01 100 chrII:6875-7104 9.18e-01 100 chrXII:1002294-1003371 9.25e-02 100 chrXII:366768-366943 7.98e-01 100 chrXII:947236-948220 5.31e-01 100 chrVIII:62522-62934 5.13e-01 100 chrIV:220927-222369 5.14e-01 100 chrXV:113472-113884 2.15e-01 100 chrX:157467-157567 6.89e-02 100 chrIV:488482-489101 3.07e-07 63_[+1(3.57e-11)]_12 chrII:181342-181660 6.73e-01 100 chrII:612024-613923 7.45e-01 100 chrI:65836-67497 8.22e-01 100 chrXIV:576683-577692 2.50e-01 100 chrX:396522-396622 3.83e-10 21_[+1(1.25e-10)]_12_[-2(3.11e-07)]_\ 23 chrXIV:518820-519138 3.38e-01 100 chrX:374203-374303 3.08e-05 26_[+1(1.39e-08)]_49 chrIX:177571-178197 1.14e-02 43_[+3(6.95e-06)]_36 chrXII:875180-875646 5.99e-10 19_[+2(9.07e-09)]_37_[-1(7.22e-09)] chrXVI:822723-824204 4.64e-01 100 chrV:435632-436010 2.07e-04 27_[-2(2.03e-07)]_54 chrII:477032-477747 9.01e-02 100 chrIV:520742-521181 2.04e-04 67_[+2(8.72e-07)]_14 chrIV:1328855-1330046 9.72e-02 100 chrIV:1401026-1403470 7.89e-02 100 chrIX:255092-257115 1.36e-02 58_[-3(2.30e-05)]_21 chrIX:391794-391997 6.31e-01 100 chrIV:1175611-1176101 6.01e-09 29_[+2(3.82e-07)]_14_[-1(2.32e-09)]_\ 13 chrXII:440442-441704 9.18e-01 100 chrVII:857097-857644 1.92e-02 65_[+1(4.71e-05)]_10 chrXII:780507-781881 7.59e-01 100 chrXI:558556-559459 6.90e-01 100 chrII:197176-197832 8.04e-06 46_[+2(3.51e-09)]_35 chrVII:1057157-1057455 7.55e-03 19_[+3(1.69e-06)]_60 chrXV:80372-81460 5.24e-01 100 chrX:517648-517748 8.43e-02 [+1(4.56e-05)]_75 chrVIII:125915-126308 3.98e-02 53_[+3(2.50e-05)]_26 chrV:85118-86933 6.28e-01 100 chrXV:92827-94782 6.08e-01 100 chrXIII:837695-838200 1.86e-03 37_[+2(6.14e-07)]_44 chrXIII:23993-25522 7.44e-01 100 chrXIV:568052-568662 4.99e-04 [-3(5.23e-08)]_79 chrVII:544289-544917 2.51e-10 4_[-3(2.40e-06)]_6_[+1(3.51e-08)]_\ 13_[-2(1.76e-06)]_12 chrIII:163440-164237 5.87e-01 100 chrV:492204-492553 1.54e-09 31_[+1(2.99e-08)]_14_[-2(2.27e-07)]_\ 11 chrX:227729-227829 7.13e-01 100 chrVII:440464-441168 2.12e-04 15_[-2(1.27e-07)]_66 chrXIV:585435-586514 4.79e-01 100 chrXVI:435504-436198 8.06e-01 100 chrXII:855757-857630 2.34e-01 100 chrXVI:371201-373007 6.65e-01 100 chrIV:359360-359785 4.04e-05 61_[+2(9.07e-09)]_20 chrXV:287780-288426 8.59e-02 100 chrIV:915186-916263 8.20e-01 100 chrV:396748-397932 6.29e-01 100 chrXVI:282056-282971 8.82e-01 100 chrV:354675-355370 6.92e-07 [-1(3.02e-11)]_75 chrXV:281834-282625 9.46e-07 22_[-1(1.25e-10)]_53 chrIV:1233329-1234223 8.79e-01 100 chrX:745027-745127 8.74e-01 100 chrXVI:622178-622843 4.13e-01 100 chrXV:979723-981227 3.18e-01 100 chrV:362707-363281 6.57e-01 100 chrXIII:768179-768439 9.68e-01 100 chrVI:162010-162380 4.64e-01 100 chrXII:712272-712708 5.46e-01 100 chrVII:277034-278710 2.51e-01 100 chrIV:568668-569282 8.10e-04 45_[+2(1.76e-06)]_36 chrIV:1359194-1361216 4.84e-01 100 chrXV:899934-901240 4.50e-02 48_[-2(1.47e-05)]_33 chrVII:545109-546024 4.95e-02 16_[+3(7.43e-05)]_63 chrXV:778596-779454 9.54e-01 100 chrIV:1180271-1181041 8.63e-01 100 chrII:44799-45363 4.60e-04 37_[+3(1.97e-07)]_42 chrXIII:225355-226641 9.63e-02 17_[-3(5.97e-05)]_62 chrI:182156-183175 8.69e-01 100 chrXIII:420290-420858 1.47e-06 71_[+1(2.21e-10)]_4 chrXIV:104609-105200 2.26e-01 100 chrXI:355877-356497 1.02e-02 5_[+3(1.69e-06)]_74 chrXI:490751-491204 2.66e-04 47_[+2(2.27e-07)]_34 chrX:414767-414867 2.88e-01 100 chrVII:147955-149561 1.88e-02 70_[+3(5.13e-06)]_9 chrXV:423877-424622 1.61e-02 [-3(5.14e-05)]_79 chrVII:287086-287776 4.38e-01 100 chrXVI:744069-744640 4.96e-05 18_[-1(2.68e-07)]_57 chrV:51832-53155 1.30e-02 12_[-3(3.73e-06)]_67 chrXV:505698-506774 5.13e-01 100 chrX:531569-531669 2.95e-09 9_[-1(1.25e-10)]_5_[+3(3.00e-06)]_\ 40 chrXI:158233-159654 2.09e-03 9_[-3(6.19e-07)]_70 chrIV:1305406-1305841 1.69e-06 63_[+2(3.15e-10)]_18 chrV:117198-118327 4.22e-01 100 chrVI:95470-95911 5.62e-01 100 chrIV:386065-387643 5.77e-01 100 chrVIII:375416-376071 2.66e-01 100 chrXVI:701868-702321 3.89e-01 100 chrXVI:280554-281901 2.94e-01 100 chrXI:312369-314023 1.42e-01 100 chrXII:1028173-1028561 3.15e-03 14_[+3(1.18e-06)]_65 chrXV:464282-464659 2.00e-04 36_[+2(6.72e-07)]_45 chrV:53525-53937 4.77e-01 100 chrIV:1013423-1013923 4.23e-01 100 chrXV:1025719-1026057 9.63e-01 100 chrXII:1029114-1030182 4.61e-01 100 chrVII:726109-726755 7.77e-01 100 chrIV:555387-556622 6.21e-02 43_[+2(9.43e-05)]_38 chrIV:758774-759645 4.72e-01 100 chrV:311720-312294 2.50e-06 73_[+1(2.08e-09)]_2 chrXVI:648933-650084 5.05e-01 100 chrVI:222874-224144 7.25e-01 100 chrV:135185-136199 9.25e-01 100 chrXIII:306156-307192 8.12e-02 100 chrIX:183305-183699 2.21e-05 35_[-2(3.51e-09)]_46 chrV:166831-167613 1.25e-01 4_[-3(6.92e-05)]_75 chrVII:555113-556696 4.47e-01 100 chrVII:695588-697202 3.63e-03 12_[-3(8.05e-07)]_[-3(6.95e-06)]_46 chrXIV:61340-64529 4.36e-01 100 chrXIII:362945-363372 5.30e-04 44_[-3(4.10e-07)]_35 chrXI:430798-431644 2.94e-01 100 chrXIV:374683-375123 6.76e-09 22_[+2(1.27e-07)]_32_[-1(6.44e-08)]_\ 2 chrXV:79765-80117 2.45e-02 75_[+3(8.47e-06)]_4 chrXII:521893-522399 1.00e-01 1_[-3(7.43e-05)]_78 chrIX:248514-249290 3.73e-14 4_[+2(3.15e-10)]_23_[-1(1.13e-07)]_\ 8_[+3(3.56e-07)] chrXII:628134-628954 4.46e-01 100 chrV:235071-237136 1.51e-01 100 chrX:58683-58783 2.18e-05 78_[-3(1.33e-08)]_1 chrXI:100421-106788 3.04e-01 100 chrIV:802571-803010 1.50e-05 36_[-2(8.72e-07)]_45 chrXII:374204-374720 5.14e-01 100 chrVII:290-2206 4.55e-01 100 chrXIV:575109-576140 9.86e-03 33_[-3(4.16e-06)]_46 chrV:487109-487605 8.57e-08 31_[+1(3.02e-11)]_44 chrV:441775-442652 9.86e-01 100 chrVII:968878-969089 4.52e-01 100 chrIV:118431-118861 9.29e-01 100 chrIX:394806-395639 7.40e-01 100 chrXV:671065-671465 7.17e-01 100 chrXV:487440-487750 6.98e-01 100 chrIV:645009-645368 1.10e-10 22_[+1(1.80e-11)]_13_[-2(8.72e-07)]_\ 21 chrIV:437534-438113 6.54e-11 5_[+2(3.15e-10)]_23_[-1(4.10e-08)]_\ 28 chrXI:161987-162734 7.44e-01 100 chrXII:1011725-1012506 1.71e-03 30_[+3(4.10e-07)]_49 chrX:73394-73494 3.86e-02 100 chrXII:673502-674634 9.08e-02 100 chrXI:46719-47021 4.04e-01 100 chrXII:370552-371202 8.85e-01 100 chrIV:434036-435119 1.26e-02 43_[+3(4.62e-06)]_36 chrIV:1488935-1489944 1.98e-03 43_[+3(4.10e-07)]_36 chrIV:1362358-1362572 7.11e-01 100 chrXIII:267654-268270 6.78e-01 100 chrVII:959952-961694 5.18e-01 100 chrXVI:93367-94366 3.00e-01 100 chrXIII:195937-196301 1.24e-09 6_[+1(1.86e-09)]_44_[-2(6.72e-07)]_\ 6 chrXIV:619735-620035 3.18e-01 100 chrXIII:861212-861388 1.90e-01 100 chrXI:517789-518069 9.39e-01 100 chrX:540782-540882 2.64e-01 100 chrI:141560-141922 8.82e-01 100 chrXIV:493696-495031 8.74e-01 100 chrVI:167250-167688 9.98e-08 24_[+2(6.14e-07)]_30_[-1(2.53e-08)]_\ 2 chrVII:706944-707180 3.71e-03 28_[-3(4.72e-07)]_51 chrXI:618732-619290 2.23e-03 22_[-2(4.77e-05)]_59 chrVI:136641-137703 8.38e-01 100 chrIV:125303-126021 1.18e-01 100 chrIX:96814-97577 6.37e-01 100 chrVII:254106-254707 6.22e-01 100 chrXV:925188-925435 4.97e-01 100 chrXV:228004-228548 9.45e-01 100 chrVII:730956-731435 1.84e-04 32_[-1(8.57e-08)]_43 chrXIV:783530-784324 3.57e-02 100 chrIV:916565-917073 3.71e-01 100 chrV:363671-364481 2.38e-01 100 chrIX:254206-254554 4.44e-01 100 chrXV:594310-594648 9.16e-01 100 chrX:538016-538116 7.00e-01 100 chrIV:1086784-1087347 3.56e-02 70_[+3(1.24e-05)]_9 chrXV:866529-868106 9.44e-01 100 chrV:430999-431957 9.98e-01 100 chrXIV:632406-632938 4.22e-07 17_[-1(8.57e-08)]_4_[+3(4.16e-06)]_\ 33 chrII:59547-61299 8.89e-02 65_[-2(2.67e-05)]_16 chrVII:823342-823696 6.41e-10 19_[+2(3.11e-07)]_15_[-1(2.21e-10)]_\ 22 chrXIII:732022-733382 1.96e-01 100 chrXIII:320981-321332 6.19e-07 23_[-3(3.35e-06)]_4_[+1(3.79e-08)]_\ 27 chrXII:498297-500231 5.97e-02 100 chrIV:928581-930280 1.68e-04 67_[-3(2.46e-08)]_12 chrXVI:689392-689841 3.04e-10 5_[+2(3.15e-10)]_23_[-1(1.13e-07)]_\ 28 chrIII:168107-168541 1.10e-10 34_[+1(1.80e-11)]_13_[-2(8.72e-07)]_\ 9 chrIV:216759-218079 1.04e-01 100 chrXIV:525070-525269 6.65e-01 100 chrXV:877802-877992 3.51e-01 100 chrX:115608-115708 4.16e-03 38_[-2(5.41e-05)]_43 chrIV:519659-519909 1.00e-09 15_[+2(2.29e-09)]_25_[-1(4.78e-08)]_\ 16 chrIV:946146-946648 1.34e-04 20_[-1(2.53e-08)]_55 chrII:168403-169646 6.66e-01 100 chrIV:1491988-1492358 7.47e-01 100 chrXV:380667-381102 6.72e-03 59_[-3(6.95e-06)]_20 chrX:703261-703361 5.80e-01 100 chrXVI:731909-732313 6.07e-01 100 chrXV:226446-226894 8.53e-04 35_[-2(3.11e-07)]_46 chrV:438517-439013 1.79e-06 25_[-1(2.21e-10)]_50 chrVIII:554119-554716 3.49e-01 100 chrXV:348780-349246 6.23e-01 100 chrIII:292735-292997 7.43e-01 100 chrV:99887-100337 6.00e-01 100 chrIV:667669-668207 6.82e-01 100 chrXVI:810582-811263 2.67e-03 35_[-3(2.40e-06)]_44 chrXVI:134948-135836 7.53e-02 100 chrIX:23453-25298 9.22e-01 100 chrXV:1027790-1029100 3.63e-02 100 chrVII:779410-779921 1.68e-10 7_[+2(8.01e-07)]_13_[-1(1.67e-10)]_\ 36 chrVII:856680-856930 3.07e-01 100 chrI:138975-139363 6.11e-05 39_[+2(6.72e-07)]_42 chrVII:876153-878187 3.61e-02 23_[-3(2.11e-05)]_56 chrII:326531-327158 6.48e-10 5_[+1(3.57e-11)]_15_[-2(2.03e-06)]_\ 36 chrXV:92069-92427 4.85e-01 100 chrII:9358-9995 5.98e-06 7_[-1(4.78e-08)]_68 chrVII:788324-788735 7.44e-01 100 chrIV:1300008-1301334 8.64e-01 100 chrXI:518892-519202 5.33e-01 100 chrV:305813-307457 1.27e-01 100 chrXI:379693-380748 4.65e-01 100 chrII:350606-351041 1.17e-03 60_[+2(8.72e-07)]_21 chrVII:345866-346639 6.56e-01 100 chrXV:960896-963204 3.61e-01 100 chrXIII:296623-298878 7.64e-01 100 chrXV:988698-989458 6.86e-01 100 chrXII:522582-523711 4.22e-01 100 chrII:644966-645423 3.14e-07 61_[-1(3.02e-11)]_14 chrVIII:475483-475906 2.78e-07 69_[+1(1.07e-10)]_6 chrIV:229441-230946 5.63e-01 100 chrXIII:378858-379617 6.80e-01 100 chrIII:90867-91088 2.04e-02 12_[-1(4.71e-05)]_63 chrXVI:775639-776095 9.71e-01 100 chrXII:64963-65894 1.89e-01 100 chrVII:624889-625500 7.85e-02 100 chrX:139121-139221 9.83e-01 100 chrIV:129709-130982 8.26e-01 100 chrX:348846-348946 2.02e-02 73_[+3(5.13e-06)]_6 chrII:604080-607131 1.40e-01 100 chrVIII:147622-148762 1.15e-02 77_[-3(6.29e-06)]_2 chrVII:411870-412576 6.31e-02 6_[-3(4.41e-05)]_73 chrVII:828397-828970 5.21e-01 100 chrXV:444645-446212 8.83e-01 100 chrXIV:302625-303866 9.36e-01 100 chrIX:300005-300498 1.97e-10 34_[+1(1.32e-09)]_14_[-2(2.03e-07)]_\ 8 chrX:378214-378314 6.41e-10 25_[+2(3.11e-07)]_15_[-1(2.21e-10)]_\ 16 chrVII:115329-115737 6.04e-10 11_[+2(9.07e-09)]_37_[-1(7.22e-09)]_\ 8 chrIV:1016948-1017513 4.94e-11 9_[-3(4.72e-07)]_4_[+1(3.02e-11)]_\ 41 chrIV:720628-721608 4.96e-02 100 chrXI:302703-303244 1.50e-04 67_[-1(8.57e-08)]_8 chrXV:353892-354300 9.43e-10 2_[+1(1.16e-08)]_14_[-2(2.47e-08)]_\ 40 chrX:606084-606184 1.13e-01 100 chrVII:561461-561709 7.54e-01 100 chrIV:541203-541908 1.14e-02 46_[-3(3.00e-06)]_33 chrXIV:241406-241853 6.11e-01 100 chrVIII:504759-505569 2.85e-01 100 chrXIV:569698-570147 8.28e-13 2_[+1(4.95e-11)]_15_[-2(3.51e-09)]_\ 39 chrIX:138561-139141 8.27e-03 44_[+3(2.40e-06)]_35 chrVIII:505824-506212 4.52e-01 100 chrVI:155493-156272 4.35e-01 100 chrIII:123369-123810 6.37e-11 45_[+1(1.02e-15)]_30 chrVII:878582-879049 4.08e-01 100 chrXV:252853-254086 5.85e-02 100 chrXI:810-1053 5.56e-01 100 chrXIII:808019-808547 1.70e-09 20_[+1(3.33e-10)]_13_[-2(8.72e-07)]_\ 23 chrX:617707-617807 4.79e-06 48_[+2(7.11e-10)]_33 chrXIII:754458-755464 8.62e-01 100 chrXII:544031-545712 1.50e-01 100 chrXIII:222574-223903 2.52e-01 100 chrVIII:556604-556767 1.06e-02 25_[+2(2.03e-06)]_56 chrIII:14481-16923 6.87e-01 100 chrXVI:172882-174100 9.45e-01 100 chrXVI:214912-215104 7.74e-01 100 chrIV:1161514-1162378 2.61e-01 100 chrV:42140-42647 4.09e-01 100 chrIV:1301808-1302605 3.77e-03 57_[+3(1.50e-06)]_22 chrXIV:413585-416253 6.04e-02 58_[+3(2.11e-05)]_21 chrXI:38753-39219 8.36e-01 100 chrXVI:860130-860683 3.95e-10 29_[+2(3.11e-07)]_12_[-1(1.25e-10)]_\ 15 chrIV:1441454-1442965 6.65e-01 100 chrXI:83976-84442 1.42e-04 55_[+2(7.72e-08)]_26 chrIV:538846-539268 6.69e-01 100 chrIX:370217-370661 7.07e-08 66_[-1(3.02e-11)]_9 chrV:299259-301442 6.94e-01 100 chrXII:88195-88442 1.83e-01 100 chrXIV:771816-772388 2.24e-02 51_[-1(2.12e-05)]_24 chrVIII:381439-382770 7.68e-01 100 chrXV:853985-854794 7.40e-01 100 chrXIV:392334-392717 9.73e-01 100 chrV:288149-288748 6.09e-06 30_[-3(3.77e-05)]_1_[+1(1.13e-07)]_\ 23 chrX:424273-424373 3.29e-06 47_[-2(2.29e-09)]_34 chrXII:951042-953642 5.18e-01 100 chrIV:465199-465519 4.46e-01 100 chrVI:64012-65383 4.99e-01 100 chrVIII:451356-453044 8.59e-01 100 chrI:28592-28901 6.76e-01 100 chrXIV:495204-495940 8.25e-01 100 chrIV:340252-341635 4.25e-02 31_[-3(5.14e-05)]_48 chrIV:1351888-1353400 4.39e-01 100 chrXV:968106-968418 3.18e-01 100 chrXIV:715952-716642 1.14e-02 1_[+3(6.29e-06)]_78 chrII:444743-445374 1.93e-01 100 chrXII:231966-234239 5.56e-01 100 chrIV:410150-410785 1.32e-05 1_[-1(3.79e-08)]_74 chrXIV:444459-444806 1.93e-04 65_[+3(1.66e-08)]_14 chrXII:809854-815747 3.99e-01 100 chrXII:656835-657208 1.32e-04 9_[-2(1.53e-08)]_72 chrIV:1461459-1461841 2.75e-01 100 chrII:642863-643252 4.72e-04 7_[+1(2.12e-07)]_68 chrIV:381718-384805 2.15e-02 23_[+2(3.08e-05)]_58 chrIV:83433-83821 2.16e-09 8_[-1(1.25e-10)]_12_[+3(2.14e-06)]_\ 34 chrXIII:145798-146274 3.82e-04 18_[+3(8.05e-07)]_61 chrV:138452-140898 7.50e-01 100 chrVIII:214140-214352 3.72e-04 60_[+3(8.83e-08)]_19 chrXII:262843-264054 8.67e-01 100 chrIX:323989-324376 1.13e-01 100 chrX:172746-172846 4.06e-02 74_[-3(1.24e-05)]_5 chrV:550966-551577 3.87e-07 71_[+1(4.95e-11)]_4 chrIV:599808-600173 9.76e-03 25_[+1(5.83e-05)]_50 chrXVI:692846-695034 9.37e-01 100 chrXV:407599-408225 8.02e-01 100 chrXIV:96076-96528 2.86e-03 34_[-2(8.01e-07)]_17_[+2(2.45e-05)]_\ 11 chrXIII:91384-92089 2.20e-02 67_[+1(8.50e-05)]_8 chrX:523874-523974 1.72e-06 [-2(3.15e-10)]_81 chrI:166174-166598 1.10e-01 100 chrV:130831-131368 5.16e-11 40_[+1(4.95e-11)]_13_[-2(8.72e-07)]_\ 3 chrX:510620-510720 9.99e-01 100 chrIV:490586-491248 2.29e-02 7_[-3(5.68e-06)]_72 chrXVI:520020-520527 1.03e-01 36_[+3(8.57e-05)]_43 chrII:395599-397904 3.95e-03 2_[+3(1.91e-06)]_77 chrVII:736200-736875 1.52e-03 64_[-3(1.44e-07)]_15 chrXIII:914914-915377 1.40e-02 48_[-3(5.68e-06)]_31 chrXVI:451747-453214 3.08e-01 100 chrXVI:75036-75287 8.55e-02 100 chrVII:364890-366720 6.54e-01 100 chrVII:483381-483652 9.37e-02 100 chrIV:913942-914850 6.16e-01 100 chrX:608322-608422 1.09e-01 100 chrII:405648-406244 3.48e-08 20_[-1(1.39e-08)]_25_[+2(1.76e-06)]_\ 11 chrXVI:678892-679313 2.09e-04 13_[+3(5.23e-08)]_66 chrXI:67808-68395 4.74e-03 44_[-3(1.91e-06)]_35 chrXII:713151-713529 4.11e-02 28_[-3(9.32e-06)]_51 chrXV:571739-572142 3.95e-03 74_[+2(1.76e-06)]_7 chrXII:369662-370276 3.62e-01 100 chrVIII:410999-411730 4.40e-01 100 chrVII:920960-921755 9.09e-01 100 chrIX:325743-326216 5.56e-01 100 chrVII:930868-931652 4.26e-01 100 chrXV:1003956-1004997 9.23e-04 55_[+3(1.97e-07)]_24 chrXII:97582-97845 5.79e-01 100 chrVII:700402-701237 3.42e-01 100 chrXIV:602099-602563 6.74e-13 37_[+2(3.51e-09)]_15_[-1(4.95e-11)]_\ 4 chrVIII:148977-149264 5.97e-03 54_[+3(1.62e-05)]_25 chrXI:614791-615208 1.23e-01 100 chrXV:159221-160191 4.39e-02 7_[+2(2.67e-05)]_74 chrXII:611433-612031 9.57e-01 100 chrVII:205288-206311 5.34e-01 100 chrXV:1029255-1029509 5.76e-01 100 chrVII:533845-535176 5.03e-02 20_[-3(1.48e-05)]_59 chrIX:380165-380883 9.85e-01 100 chrVI:226391-226960 3.67e-09 45_[-3(8.05e-07)]_4_[+1(1.32e-09)]_\ 5 chrVII:422861-423350 2.86e-03 43_[+2(4.21e-07)]_38 chrXIII:161956-162695 5.68e-01 100 chrXV:274478-274985 1.70e-03 59_[-1(3.75e-07)]_16 chrVII:794184-794557 9.45e-01 100 chrXII:167738-168257 7.69e-11 4_[+1(4.10e-08)]_23_[-2(3.15e-10)]_\ 29 chrXI:99778-99982 9.09e-01 100 chrVII:397938-398156 6.32e-01 100 chrXIII:625828-627507 9.24e-01 100 chrXV:340130-340602 3.60e-04 29_[-2(2.27e-07)]_52 chrX:355183-355283 8.10e-04 45_[+2(1.76e-06)]_36 chrXIII:650701-652970 6.84e-01 100 chrVIII:388678-389002 1.35e-03 77_[-3(8.47e-06)]_2 chrXI:333626-334975 2.35e-02 53_[-3(8.47e-06)]_26 chrXV:216287-216707 7.06e-01 100 chrXV:160347-160724 7.56e-01 100 chrXI:513183-513616 2.34e-03 28_[-2(1.76e-06)]_53 chrXI:140656-141483 5.95e-08 6_[+1(3.02e-11)]_69 chrVI:191057-191775 1.72e-01 100 chrIV:1269921-1271058 1.54e-01 100 chrV:434384-435158 9.04e-01 100 chrX:415768-415868 1.18e-01 100 chrXI:307943-308510 2.19e-03 15_[-2(3.11e-07)]_66 chrII:167551-168212 4.20e-01 100 chrV:378007-379219 7.24e-01 100 chrXIII:499029-500764 2.91e-01 100 chrX:390819-390919 3.77e-09 8_[+1(2.32e-09)]_14_[-2(3.82e-07)]_\ 34 chrVII:401412-401614 4.24e-10 1_[-3(1.69e-06)]_49_[+1(3.02e-11)]_\ 4 chrVII:738889-739582 9.24e-01 100 chrIII:295316-296031 5.40e-01 100 chrVIII:133968-135049 4.54e-01 100 chrX:607910-608010 3.00e-02 66_[+3(7.98e-05)]_13 chrII:544624-544793 7.71e-01 100 chrXV:300891-301481 8.68e-06 29_[-1(1.86e-09)]_46 chrXII:734582-734983 3.83e-05 76_[+2(3.51e-09)]_5 chrVIII:382932-383633 8.19e-02 100 chrIV:525622-527366 9.79e-01 100 chrIX:141811-142510 1.69e-01 59_[+3(9.19e-05)]_20 chrXII:636683-640002 1.07e-01 10_[-1(5.16e-05)]_65 chrIV:992683-993215 8.04e-01 100 chrXIV:721210-723197 7.96e-01 100 chrVII:882344-884069 7.83e-01 100 chrXII:731174-732303 8.10e-01 100 chrIV:491460-492610 4.36e-01 100 chrXII:448475-448858 6.84e-11 41_[+1(1.80e-11)]_13_[-2(8.72e-07)]_\ 2 chrXII:704327-704572 1.60e-06 49_[+3(3.18e-10)]_30 chrV:23438-23821 2.83e-01 100 chrIX:174864-175513 1.27e-01 31_[+3(4.41e-05)]_48 chrXV:167972-168472 1.87e-01 100 chrXIV:301489-302313 2.93e-01 100 chrXV:710125-710744 7.83e-02 100 chrXIV:102576-103258 2.61e-02 3_[+3(1.48e-05)]_76 chrIII:81982-82685 7.74e-02 100 chrI:180951-181509 3.77e-04 41_[-1(4.71e-05)]_7_[+3(8.47e-06)]_\ 6 chrVIII:296705-297255 9.88e-01 100 chrIX:210516-210954 3.59e-07 20_[-1(4.95e-11)]_55 chrIII:149585-150201 1.37e-01 100 chrII:413763-415306 9.02e-01 100 chrV:322054-323431 5.10e-01 100 chrXIII:463327-464017 9.50e-01 100 chrVIII:115967-116406 2.15e-04 17_[-2(2.47e-08)]_64 chrX:204543-204643 1.43e-04 23_[-1(3.51e-08)]_52 chrXII:921678-923179 8.97e-01 100 chrX:651215-651315 5.92e-01 100 chrXIII:407905-408801 2.54e-01 100 chrIX:197341-197826 6.68e-01 100 chrIX:25926-26370 2.67e-01 100 chrXVI:404514-405991 8.90e-01 100 chrXIV:283131-283469 3.93e-01 100 chrXV:903970-904650 1.95e-02 100 chrXV:832352-832815 4.67e-01 100 chrVII:438574-439935 1.99e-01 100 chrVI:31791-32235 2.25e-01 100 chrII:592356-593473 4.77e-01 100 chrXV:797007-797549 8.84e-01 100 chrX:120302-120402 5.02e-01 100 chrXIII:480388-480828 1.08e-05 70_[+1(1.32e-09)]_5 chrVIII:358291-358804 3.30e-04 46_[-2(1.27e-07)]_35 chrXIV:330484-331073 6.18e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************