Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.011496 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.05411 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.068043 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.012148 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background Finished invoke: name: bg status: 0 time: 0.00926 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 585.171191 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/seqs-shuffled Finished invoke: name: dreme status: 0 time: 55.042952 Invoking: centrimo -seqlen 296 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.181702 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.317348 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background -primary GSBBNBDTRGYBYAGTGGK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.287774 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background -primary SGGRATCGAACCSVKGWYCYY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.279997 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background -primary TTWWACAYCCRTACATYW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.262568 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background -primary BTAAGGCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.184804 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background -primary ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.18546 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background -primary CTATCACR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.194563 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background -primary GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.175336 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background -primary CACGGTGM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.186192 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background -primary AAGTGRT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.160561 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background -primary AAGCGWGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.1869 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background -primary CTCTCSCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.160503 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background -primary CACGCGAS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.162901 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background -primary CTGAGCTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.181318 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background -primary TTGTTGWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.162809 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background --motif GSBBNBDTRGYBYAGTGGK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa Finished invoke: name: fimo1 status: 0 time: 0.163639 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background --motif SGGRATCGAACCSVKGWYCYY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa Finished invoke: name: fimo2 status: 0 time: 0.16876 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background --motif TTWWACAYCCRTACATYW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa Finished invoke: name: fimo3 status: 0 time: 0.170186 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background --motif BTAAGGCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa Finished invoke: name: fimo4 status: 0 time: 0.081803 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background --motif ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa Finished invoke: name: fimo5 status: 0 time: 0.076887 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background --motif CTATCACR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa Finished invoke: name: fimo6 status: 0 time: 0.077179 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background --motif GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa Finished invoke: name: fimo7 status: 0 time: 0.077146 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background --motif CACGGTGM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa Finished invoke: name: fimo8 status: 0 time: 0.078812 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background --motif AAGTGRT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa Finished invoke: name: fimo9 status: 0 time: 0.075775 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background --motif AAGCGWGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa Finished invoke: name: fimo10 status: 0 time: 0.080004 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background --motif CTCTCSCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa Finished invoke: name: fimo11 status: 0 time: 0.076811 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background --motif CACGCGAS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa Finished invoke: name: fimo12 status: 0 time: 0.075081 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background --motif CTGAGCTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa Finished invoke: name: fimo13 status: 0 time: 0.074549 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/background --motif TTGTTGWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/YJM789--YRR1.fa Finished invoke: name: fimo14 status: 0 time: 0.075221 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--YRR1/summary.tsv Finished invoke: name: summary status: 0 time: 0.164212 Done