Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.086207 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.065904 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.092239 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.028667 Invoking: fasta-subsample /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/seqs-centered 600 -rest /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/seqs-discarded -seed 1 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/seqs-sampled Finished invoke: name: sample_seqs status: 0 time: 0.082506 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background Finished invoke: name: bg status: 0 time: 0.025715 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 649.568055 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/seqs-shuffled Finished invoke: name: dreme status: 0 time: 119.842358 Invoking: centrimo -seqlen 630 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.516762 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.699083 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -primary WGSYYBNKTGGCSYAGTGGKTARVGSS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.423945 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -primary CTHWTAATCHKRAGRTYMKGGGTTCGANY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.288336 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -primary AADATGTACGGRTGTAAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.324128 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -primary CAKCWTC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.384704 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -primary CTTCHA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.475489 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -primary WTACCR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.483653 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -primary CSAACCAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.211692 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -primary GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.219249 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -primary CGCCTTAR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.201683 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -primary GVTGCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.287748 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -primary CSAAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.467371 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -primary CSGCTAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.226666 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -primary ATTTAGCM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.185494 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -primary CCTTAGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.233327 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -primary AATAYTAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.211865 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/spamo_out_16 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -primary AYCGATGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.237465 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/spamo_out_17 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -primary ACCAMTAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: spamo17 status: 0 time: 0.232188 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/spamo_out_18 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -primary TTTTGGW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: spamo18 status: 0 time: 0.532813 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/spamo_out_19 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -primary ATCRGAAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: spamo19 status: 0 time: 0.223507 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/spamo_out_20 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background -primary SATCGTGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml Finished invoke: name: spamo20 status: 0 time: 0.20312 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background --motif WGSYYBNKTGGCSYAGTGGKTARVGSS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa Finished invoke: name: fimo1 status: 0 time: 0.514658 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background --motif CTHWTAATCHKRAGRTYMKGGGTTCGANY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa Finished invoke: name: fimo2 status: 0 time: 0.536586 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background --motif AADATGTACGGRTGTAAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa Finished invoke: name: fimo3 status: 0 time: 0.543575 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background --motif CAKCWTC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa Finished invoke: name: fimo4 status: 0 time: 0.442291 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background --motif CTTCHA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa Finished invoke: name: fimo5 status: 0 time: 0.389136 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background --motif WTACCR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa Finished invoke: name: fimo6 status: 0 time: 0.371187 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background --motif CSAACCAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa Finished invoke: name: fimo7 status: 0 time: 0.410958 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background --motif GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa Finished invoke: name: fimo8 status: 0 time: 0.42732 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background --motif CGCCTTAR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa Finished invoke: name: fimo9 status: 0 time: 0.394046 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background --motif GVTGCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa Finished invoke: name: fimo10 status: 0 time: 0.414706 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background --motif CSAAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa Finished invoke: name: fimo11 status: 0 time: 0.366875 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background --motif CSGCTAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa Finished invoke: name: fimo12 status: 0 time: 0.389244 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background --motif ATTTAGCM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa Finished invoke: name: fimo13 status: 0 time: 0.402259 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background --motif CCTTAGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa Finished invoke: name: fimo14 status: 0 time: 0.404051 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background --motif AATAYTAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa Finished invoke: name: fimo15 status: 0 time: 0.441546 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/fimo_out_16 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background --motif AYCGATGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa Finished invoke: name: fimo16 status: 0 time: 0.408087 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/fimo_out_17 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background --motif ACCAMTAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa Finished invoke: name: fimo17 status: 0 time: 0.416145 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/fimo_out_18 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background --motif TTTTGGW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa Finished invoke: name: fimo18 status: 0 time: 0.393123 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/fimo_out_19 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background --motif ATCRGAAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa Finished invoke: name: fimo19 status: 0 time: 0.423877 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/fimo_out_20 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/background --motif SATCGTGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/YJM789--THP2.fa Finished invoke: name: fimo20 status: 0 time: 0.427575 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--THP2/summary.tsv Finished invoke: name: summary status: 0 time: 0.457595 Done