******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--SWR1/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrIX:316222-316529 1.0000 100 chrXII:460473-460668 1.0000 100 chrXII:796495-796765 1.0000 100 chrII:477107-477380 1.0000 100 chrXV:168065-168332 1.0000 100 chrV:305858-306127 1.0000 100 chrXII:459654-459887 1.0000 100 chrII:332401-332666 1.0000 100 chrXIII:551441-551737 1.0000 100 chrXII:922205-922460 1.0000 100 chrXII:713235-713494 1.0000 100 chrVII:149188-149445 1.0000 100 chrIV:117241-117503 1.0000 100 chrXV:216338-216585 1.0000 100 chrXII:781527-781782 1.0000 100 chrXV:1028783-1029027 1.0000 100 chrVIII:382992-383256 1.0000 100 chrIV:1359478-1359732 1.0000 100 chrXVI:731995-732250 1.0000 100 chrII:415548-415800 1.0000 100 chrVIII:75035-75291 1.0000 100 chrVII:534874-535143 1.0000 100 chrII:592960-593208 1.0000 100 chrXVI:700025-700277 1.0000 100 chrIII:163548-163785 1.0000 100 chrXI:618875-619116 1.0000 100 chrXV:505178-505423 1.0000 100 chrVIII:125987-126242 1.0000 100 chrV:140561-140810 1.0000 100 chrIV:1401299-1401546 1.0000 100 chrX:73463-73703 1.0000 100 chrVII:788411-788654 1.0000 100 chrXV:866633-866871 1.0000 100 chrXIII:225423-225665 1.0000 100 chrXIV:63194-63399 1.0000 100 chrIV:130661-130884 1.0000 100 chrV:53608-53844 1.0000 100 chrIV:1301015-1301252 1.0000 100 chrVII:649028-649277 1.0000 100 chrXV:79825-80061 1.0000 100 chrVIII:505879-506111 1.0000 100 chrV:396263-396506 1.0000 100 chrVII:310572-310814 1.0000 100 chrIX:99728-99948 1.0000 100 chrXII:673925-674152 1.0000 100 chrVII:277101-277331 1.0000 100 chrII:605804-606034 1.0000 100 chrX:90142-90378 1.0000 100 chrXII:241704-241940 1.0000 100 chrXI:302800-303037 1.0000 100 chrXIV:495284-495475 1.0000 100 chrIV:1175714-1175953 1.0000 100 chrX:542921-543163 1.0000 100 chrX:422832-423062 1.0000 100 chrII:89694-89903 1.0000 100 chrV:423160-423399 1.0000 100 chrIV:341341-341561 1.0000 100 chrXVI:769191-769409 1.0000 100 chrVI:65055-65268 1.0000 100 chrVII:661628-661853 1.0000 100 chrXVI:744175-744429 1.0000 100 chrVII:254232-254477 1.0000 100 chrIII:227823-228041 1.0000 100 chrXV:93004-93219 1.0000 100 chrX:391017-391244 1.0000 100 chrIV:308083-308317 1.0000 100 chrX:617803-618020 1.0000 100 chrV:138546-138782 1.0000 100 chrXIII:732101-732326 1.0000 100 chrX:415936-416142 1.0000 100 chrX:703332-703565 1.0000 100 chrXIII:379308-379518 1.0000 100 chrII:45070-45281 1.0000 100 chrXIII:808205-808437 1.0000 100 chrVII:555416-555636 1.0000 100 chrXIII:837807-838034 1.0000 100 chrXVI:622546-622761 1.0000 100 chrXII:167953-168154 1.0000 100 chrVII:287307-287562 1.0000 100 chrXVI:406290-406482 1.0000 100 chrXII:366134-366351 1.0000 100 chrVII:412255-412482 1.0000 100 chrX:424435-424636 1.0000 100 chrIV:222045-222248 1.0000 100 chrXII:797070-797270 1.0000 100 chrX:75440-75636 1.0000 100 chrXII:448599-448812 1.0000 100 chrVII:878741-878933 1.0000 100 chrVI:137437-137651 1.0000 100 chrVII:541738-541965 1.0000 100 chrVIII:132990-133233 1.0000 100 chrXIII:145972-146221 1.0000 100 chrVII:1004135-1004324 1.0000 100 chrXI:158305-158515 1.0000 100 chrXII:897777-897983 1.0000 100 chrXV:354044-354232 1.0000 100 chrX:355238-355444 1.0000 100 chrIV:1017172-1017385 1.0000 100 chrVI:157925-158128 1.0000 100 chrXV:300978-301182 1.0000 100 chrVIII:388911-389107 1.0000 100 chrV:431253-431471 1.0000 100 chrXV:226604-226796 1.0000 100 chrXIII:572858-573060 1.0000 100 chrX:651344-651540 1.0000 100 chrIV:1075420-1075657 1.0000 100 chrV:177001-177206 1.0000 100 chrVI:210615-210820 1.0000 100 chrIX:248721-248922 1.0000 100 chrXIII:754499-754679 1.0000 100 chrX:157510-157715 1.0000 100 chrII:197380-197574 1.0000 100 chrXII:605327-605535 1.0000 100 chrXII:793791-793997 1.0000 100 chrIII:142688-142884 1.0000 100 chrXV:228217-228409 1.0000 100 chrIV:359479-359669 1.0000 100 chrIX:325653-325854 1.0000 100 chrII:60937-61177 1.0000 100 chrVIII:103974-104165 1.0000 100 chrXIII:362990-363176 1.0000 100 chrXI:379580-379749 1.0000 100 chrXII:592502-592692 1.0000 100 chrII:36270-36480 1.0000 100 chrVII:823395-823576 1.0000 100 chrVII:731023-731246 1.0000 100 chrIV:1135714-1135901 1.0000 100 chrVII:726488-726682 1.0000 100 chrIX:300225-300411 1.0000 100 chrXIII:131785-132001 1.0000 100 chrXV:779789-779998 1.0000 100 chrXVI:689455-689675 1.0000 100 chrXVI:435872-436066 1.0000 100 chrVI:221822-222000 1.0000 100 chrIV:437669-437859 1.0000 100 chrX:59093-59281 1.0000 100 chrX:414859-415036 1.0000 100 chrIX:257433-257612 1.0000 100 chrXVI:210187-210375 1.0000 100 chrVII:205413-205596 1.0000 100 chrXVI:520250-520449 1.0000 100 chrVII:736234-736426 1.0000 100 chrVIII:62674-62848 1.0000 100 chrVII:438647-438830 1.0000 100 chrVII:828683-828906 1.0000 100 chrVIII:116083-116285 1.0000 100 chrIII:168291-168483 1.0000 100 chrX:115930-116116 1.0000 100 chrVI:167333-167516 1.0000 100 chrVIII:237832-238036 1.0000 100 chrXIV:241457-241660 1.0000 100 chrXIII:372404-372585 1.0000 100 chrXVI:76440-76614 1.0000 100 chrXIV:96201-96401 1.0000 100 chrXIV:104727-104899 1.0000 100 chrXIII:259177-259355 1.0000 100 chrVII:328511-328718 1.0000 100 chrVII:700543-700751 1.0000 100 chrXVI:860266-860440 1.0000 100 chrVI:162113-162301 1.0000 100 chrXIV:102610-102791 1.0000 100 chrVIII:475676-475865 1.0000 100 chrIV:992728-992893 1.0000 100 chrXI:308141-308314 1.0000 100 chrVI:95591-95754 1.0000 100 chrVII:440692-440913 1.0000 100 chrIII:90805-91010 1.0000 100 chrVI:191522-191702 1.0000 100 chrVIII:134207-134435 1.0000 100 chrXVI:56134-56339 1.0000 100 chrV:469360-469544 1.0000 100 chrVII:700961-701157 1.0000 100 chrII:226979-227167 1.0000 100 chrIV:83451-83626 1.0000 100 chrIV:488750-488962 1.0000 100 chrII:266310-266476 1.0000 100 chrII:326787-326991 1.0000 100 chrXV:274551-274757 1.0000 100 chrV:354833-355010 1.0000 100 chrXII:427016-427207 1.0000 100 chrXI:490844-491041 1.0000 100 chrXVI:775772-775940 1.0000 100 chrV:441885-442100 1.0000 100 chrXIII:290708-290897 1.0000 100 chrXII:734698-734889 1.0000 100 chrXI:578872-579132 1.0000 100 chrXI:108832-109001 1.0000 100 chrXII:784270-784437 1.0000 100 chrVII:115382-115573 1.0000 100 chrI:139074-139237 1.0000 100 chrII:645059-645246 1.0000 100 chrVII:366184-366355 1.0000 100 chrXIII:296859-297043 1.0000 100 chrIII:127613-127801 1.0000 100 chrXVI:819431-819619 1.0000 100 chrXIV:442923-443090 1.0000 100 chrXIV:568039-568204 1.0000 100 chrV:288399-288621 1.0000 100 chrIV:520877-521041 1.0000 100 chrII:604211-604378 1.0000 100 chrXIII:586589-586778 1.0000 100 chrX:524002-524188 1.0000 100 chrV:131092-131274 1.0000 100 chrX:538484-538659 1.0000 100 chrXI:162406-162624 1.0000 100 chrXI:141003-141172 1.0000 100 chrIX:324301-324481 1.0000 100 chrIV:1201650-1201827 1.0000 100 chrXII:374238-374467 1.0000 100 chrXIII:196097-196273 1.0000 100 chrVII:845545-845749 1.0000 100 chrIII:151282-151447 1.0000 100 chrII:350714-350885 1.0000 100 chrXII:932256-932412 1.0000 100 chrV:61886-62050 1.0000 100 chrVII:110584-110765 1.0000 100 chrIV:1150869-1151045 1.0000 100 chrXV:571847-572041 1.0000 100 chrI:166185-166382 1.0000 100 chrXII:1028316-1028487 1.0000 100 chrV:86509-86686 1.0000 100 chrVIII:358492-358661 1.0000 100 chrXI:46748-46919 1.0000 100 chrX:378260-378433 1.0000 100 chrIV:411354-411526 1.0000 100 chrIV:1095378-1095576 1.0000 100 chrXV:663780-663952 1.0000 100 chrXII:818531-818710 1.0000 100 chrIV:1305526-1305682 1.0000 100 chrVII:422977-423148 1.0000 100 chrXII:628358-628566 1.0000 100 chrXV:438547-438725 1.0000 100 chrVII:876298-876454 1.0000 100 chrX:233832-234006 1.0000 100 chrXVI:810585-810757 1.0000 100 chrX:354158-354358 1.0000 100 chrIX:197485-197676 1.0000 100 chrVII:774238-774390 1.0000 100 chrVII:739047-739204 1.0000 100 chrX:204632-204792 1.0000 100 chrIX:68285-68443 1.0000 100 chrIII:149801-149983 1.0000 100 chrXV:288148-288300 1.0000 100 chrX:396719-396889 1.0000 100 chrII:405787-405941 1.0000 100 chrVI:180955-181137 1.0000 100 chrVII:779514-779679 1.0000 100 chrVII:531529-531676 1.0000 100 chrXVI:880293-880472 1.0000 100 chrXII:875286-875454 1.0000 100 chrXII:1019138-1019289 1.0000 100 chrXIII:747903-748075 1.0000 100 chrV:135406-135579 1.0000 100 chrIX:183437-183616 1.0000 100 chrXIV:632498-632672 1.0000 100 chrXI:219797-219960 1.0000 100 chrXII:962998-963141 1.0000 100 chrXIII:480624-480778 1.0000 100 chrXVI:560217-560327 1.0000 100 chrXII:498597-498748 1.0000 100 chrIX:370303-370462 1.0000 100 chrV:435736-435894 1.0000 100 chrVII:122182-122304 1.0000 100 chrXIII:420573-420740 1.0000 100 chrXIII:463471-463630 1.0000 100 chrV:100019-100159 1.0000 100 chrXV:113719-113874 1.0000 100 chrIV:434268-434399 1.0000 100 chrV:487293-487455 1.0000 100 chrXI:74542-74690 1.0000 100 chrIV:619937-620100 1.0000 100 chrXV:594337-594470 1.0000 100 chrV:438608-438766 1.0000 100 chrXIII:168738-168878 1.0000 100 chrIV:358184-358302 1.0000 100 chrXII:214892-215018 1.0000 100 chrVII:544591-544708 1.0000 100 chrX:374506-374651 1.0000 100 chrXVI:378737-378886 1.0000 100 chrI:82040-82156 1.0000 100 chrXVI:188707-188839 1.0000 100 chrXIII:504755-504891 1.0000 100 chrIX:336358-336530 1.0000 100 chrVII:857454-857565 1.0000 100 chrIII:178409-178513 1.0000 100 chrXV:678961-679101 1.0000 100 chrIV:802694-802830 1.0000 100 chrXII:656964-657066 1.0000 100 chrXV:710088-710225 1.0000 100 chrX:531754-531890 1.0000 100 chrV:312048-312191 1.0000 100 chrVII:794346-794481 1.0000 100 chrII:347503-347658 1.0000 100 chrV:443187-443329 1.0000 100 chrXIV:560653-560786 1.0000 100 chrXV:282042-282176 1.0000 100 chrXII:48867-49010 1.0000 100 chrVII:930959-931124 1.0000 100 chrVIII:149027-149164 1.0000 100 chrXI:431456-431579 1.0000 100 chrIX:254340-254442 1.0000 100 chrXI:513353-513479 1.0000 100 chrXVI:338858-338991 1.0000 100 chrXV:978952-979045 1.0000 93 chrVII:185715-185796 1.0000 81 chrVIII:466947-467058 1.0000 100 chrXVI:572127-572403 1.0000 100 chrXIII:321173-321296 1.0000 100 chrIV:1352470-1352604 1.0000 100 chrIV:568798-568900 1.0000 100 chrXV:94571-94679 1.0000 100 chrX:517736-518012 1.0000 100 chrXV:976401-976493 1.0000 92 chrXI:458523-458615 1.0000 92 chrIV:579154-579283 1.0000 100 chrXIII:91807-92083 1.0000 100 chrXIV:374702-374978 1.0000 100 chrIV:1450931-1451207 1.0000 100 chrIV:519680-519778 1.0000 98 chrXIV:444566-444659 1.0000 93 chrIII:123454-123730 1.0000 100 chrXII:1052084-1052182 1.0000 98 chrXV:110960-111087 1.0000 100 chrXIII:224078-224354 1.0000 100 chrII:9412-9688 1.0000 100 chrXIV:631888-631989 1.0000 100 chrIV:490988-491264 1.0000 100 chrIV:946322-946598 1.0000 100 chrXV:1025771-1026047 1.0000 100 chrXVI:302700-302976 1.0000 100 chrIV:667840-668116 1.0000 100 chrXVI:360069-360345 1.0000 100 chrVII:405414-405690 1.0000 100 chrX:607876-608152 1.0000 100 chrVI:226579-226855 1.0000 100 chrXII:262814-263090 1.0000 100 chrXV:712413-712689 1.0000 100 chrII:181363-181639 1.0000 100 chrIV:229513-229789 1.0000 100 chrIII:308712-308988 1.0000 100 chrXI:84067-84343 1.0000 100 chrXIV:547047-547323 1.0000 100 chrIV:1461567-1461843 1.0000 100 chrVII:706949-707225 1.0000 100 chrV:551295-551384 1.0000 89 chrXVI:794485-794761 1.0000 100 chrIII:295410-295489 1.0000 79 chrXV:487431-487707 1.0000 100 chrIV:217241-217517 1.0000 100 chrXII:232557-232833 1.0000 100 chrXII:975876-976152 1.0000 100 chrXIV:726020-726296 1.0000 100 chrXV:1004063-1004339 1.0000 100 chrVII:319775-320051 1.0000 100 chrVIII:146006-146282 1.0000 100 chrV:362187-362463 1.0000 100 chrXV:464344-464620 1.0000 100 chrXIV:330819-331095 1.0000 100 chrXVI:281606-281882 1.0000 100 chrX:76212-76488 1.0000 100 chrV:434400-434676 1.0000 100 chrXV:738288-738564 1.0000 100 chrXII:522161-522437 1.0000 100 chrIX:210621-210897 1.0000 100 chrXV:854051-854327 1.0000 100 chrXII:899172-899448 1.0000 100 chrXII:283352-283628 1.0000 100 chrX:228090-228366 1.0000 100 chrXII:348279-348555 1.0000 100 chrVII:311170-311446 1.0000 100 chrIV:1059538-1059814 1.0000 100 chrXII:369267-369543 1.0000 100 chrXII:838249-838525 1.0000 100 chrII:406623-406899 1.0000 100 chrVII:673551-673827 1.0000 100 chrXIV:500344-500620 1.0000 100 chrX:139476-139752 1.0000 100 chrVIII:175098-175374 1.0000 100 chrXIII:252344-252620 1.0000 100 chrIV:210270-210546 1.0000 100 chrXII:898619-898895 1.0000 100 chrV:67266-67542 1.0000 100 chrXIII:146992-147268 1.0000 100 chrIX:373479-373755 1.0000 100 chrX:542027-542303 1.0000 100 chrXIV:577188-577464 1.0000 100 chrIV:645029-645305 1.0000 100 chrXIV:64271-64547 1.0000 100 chrXII:637190-637466 1.0000 100 chrIX:24866-25142 1.0000 100 chrXII:939850-940126 1.0000 100 chrXIV:493984-494260 1.0000 100 chrXV:159529-159805 1.0000 100 chrXII:282566-282842 1.0000 100 chrXIV:46557-46833 1.0000 100 chrXV:327126-327402 1.0000 100 chrXVI:71207-71483 1.0000 100 chrIV:1115064-1115340 1.0000 100 chrXVI:120894-121170 1.0000 100 chrXIII:702236-702512 1.0000 100 chrII:88936-89212 1.0000 100 chrXII:637401-637677 1.0000 100 chrII:89177-89453 1.0000 100 chrIX:25066-25342 1.0000 100 chrXVI:71416-71692 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--SWR1/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--SWR1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--SWR1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 405 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 40415 N= 405 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.306 C 0.194 G 0.194 T 0.306 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--SWR1/background): A 0.306 C 0.194 G 0.194 T 0.306 ******************************************************************************** ******************************************************************************** MOTIF SSCYYWAMCMACTRVGCCAHVVRVS MEME-1 width = 25 sites = 167 llr = 2444 E-value = 3.8e-494 ******************************************************************************** -------------------------------------------------------------------------------- Motif SSCYYWAMCMACTRVGCCAHVVRVS MEME-1 Description -------------------------------------------------------------------------------- Simplified A 21111365:39::433::a333441 pos.-specific C 546331:5a5:8:12:a7:432124 probability G 45121:11:1:::357::::33444 matrix T ::25563::::2a1:::3:222111 bits 2.4 * * 2.1 * * 1.9 * * 1.7 * * * * Relative 1.4 * *** * * Entropy 1.2 * *** **** (21.1 bits) 0.9 * *** **** 0.7 *** ** *** ***** 0.5 *** * ****** ****** * * 0.2 ************************* 0.0 ------------------------- Multilevel CGCTTTACCCACTAGGCCACGGGGG consensus GC CCATA A T GAA T ACAAAC sequence C TAC C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCYYWAMCMACTRVGCCAHVVRVS MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------- chrV:551295-551384 + 38 7.78e-11 TTAGCACGGT GCCTTAACCAACTGGGCCAAGAGAC CTGTAATCTG chrXII:1052084-1052182 + 35 7.78e-11 TTAGCACGGT GCCTTAACCAACTGGGCCAAGAGAC CATGAAAAGG chrV:443187-443329 + 42 7.78e-11 TTAGCACGGT GCCTTAACCAACTGGGCCAAGAGAC CAAATTTTAA chrIX:183437-183616 + 12 7.78e-11 TTAGCACGGT GCCTTAACCAACTGGGCCAAGAGAC CAGGAATTTG chrXVI:880293-880472 + 12 7.78e-11 TTAGCACGGT GCCTTAACCAACTGGGCCAAGAGAC CATTATATTG chrVII:739047-739204 - 48 7.78e-11 TTAGCACGGT GCCTTAACCAACTGGGCCAAGAGAC CTATTTTTTT chrXVI:819431-819619 - 55 7.78e-11 TTAGCACGGT GCCTTAACCAACTGGGCCAAGAGAC CATTCTATTG chrXII:734698-734889 - 60 7.78e-11 TTAGCACGGT GCCTTAACCAACTGGGCCAAGAGAC CAAACTTTGT chrII:197380-197574 - 68 7.78e-11 AGCACGGT GCCTTAACCAACTGGGCCAAGAGAC CTTGATTACT chrXIII:321173-321296 + 10 2.81e-10 CTAAGGGAG CGCGCTACCGACTACGCCACACGCC CGATTTGTAT chrXII:656964-657066 + 16 2.81e-10 GCTAAGGGAG CGCGCTACCGACTACGCCACACGCC CAATTTTCTT chrXI:219797-219960 - 68 2.81e-10 TAAGGGAG CGCGCTACCGACTACGCCACACGCC CTATTTACTG chrIV:1150869-1151045 + 9 3.43e-10 GCAGGCAT CGCCTTAACCACTCGGCCACTGGGA CTGAAACACT chrXII:784270-784437 - 52 3.43e-10 TAGCAGGCAT CGCCTTAACCACTCGGCCACTGGGA CGGTTGAACA chrXV:274551-274757 - 70 3.43e-10 GGGCAT CGCCTTAACCACTCGGCCACTGGGA CACGATTACT chrVI:191522-191702 + 26 3.43e-10 AGCAGGGCAT CGCCTTAACCACTCGGCCACTGGGA CAGAATCTCT chrXIV:560653-560786 + 71 6.12e-10 ACTAGTGTGG CGCCTTACCAACTTGGCCATAGAAG CCCGT chrVII:794346-794481 - 55 6.12e-10 GCAAGGGAAG CGCGCTACCAACTGCGCCATGTGCC CGCAATCTAT chrXII:214892-215018 + 25 6.12e-10 GCAAGGGAAG CGCGCTACCAACTGCGCCATGTGCC CTAAAACGCG chrIV:434268-434399 + 28 6.12e-10 ACTAGTGTGG CGCCTTACCAACTTGGCCATAGAAG CTTCTGATTT chrXV:113719-113874 - 57 6.12e-10 ACTAGTGTGG CGCCTTACCAACTTGGCCATAGAAG CTAAATCTCT chrI:166185-166382 - 35 6.12e-10 GCAAGGGAAG CGCGCTACCAACTGCGCCATGTGCC CAACTCATTA chrII:266310-266476 - 36 6.12e-10 ACTAGTGTGG CGCCTTACCAACTTGGCCATAGAAG CAGTTTTTGA chrXIV:104727-104899 - 43 6.12e-10 ACTAGTGTGG CGCCTTACCAACTTGGCCATAGAAG CTCAGAACTT chrVIII:116083-116285 + 20 6.12e-10 ACTAGTGTGG CGCCTTACCAACTTGGCCATAGAAG CTCTATTAGT chrX:59093-59281 + 10 6.12e-10 CTAGTGTGG CGCCTTACCAACTTGGCCATAGAAG CTTCTATTTT chrIX:325653-325854 - 46 6.12e-10 ACTAGTGTGG CGCCTTACCAACTTGGCCATAGAAG CTCGTATTTT chrXII:875286-875454 - 57 7.37e-10 AAAAGCCGAA CGCTCTACCAACTGAGCTAACAAGG ATGAGTTCTT chrXV:438547-438725 - 58 7.37e-10 AAAAGCCGAA CGCTCTACCAACTGAGCTAACAAGG ATGAGTTCTT chrVII:115382-115573 - 62 7.37e-10 AAAAGCCGAA CGCTCTACCAACTGAGCTAACAAGG ATGAGTTCTT chrXI:578872-579132 - 14 7.37e-10 AAAAGCCGAA CGCTCTACCAACTGAGCTAACAAGG ATGAGTTCTT chrVII:700961-701157 + 14 7.37e-10 AAAAGCCGAA CGCTCTACCAACTGAGCTAACAAGG ATGAGTTCTT chrIV:359479-359669 - 54 7.37e-10 AAAAGCCGAA CGCTCTACCAACTGAGCTAACAAGG ATGAGTTCTT chrXVI:769191-769409 + 27 7.37e-10 AAAAGCCGAA CGCTCTACCAACTGAGCTAACAAGG ATGAGTTCTT chrV:288399-288621 + 39 2.13e-09 TCAAGTCTGT CGCCTTAACCACTCGGCCATAGTGC CTATCATTAT chrXVI:689455-689675 - 51 2.13e-09 TCAAGTCTGT CGCCTTAACCACTCGGCCATAGTGC CCAAAATAAT chrIII:227823-228041 - 61 2.13e-09 TCGAGTCTCT CGCCTTAACCACTCGGCCATAGTGC CATTTCGATT chrV:86509-86686 - 58 2.51e-09 TCTAATCTTT CGCCTTAACCACTCGGCCAAGTTGC CATAACTCAT chrX:524002-524188 + 23 2.51e-09 TCTAATCTTT CGCCTTAACCACTCGGCCAAGTTGC CTTTAATCTC chrII:226979-227167 - 53 2.51e-09 TCTAATCTTT CGCCTTAACCACTCGGCCAAGTTGC CTCGTTTTAC chrIV:437669-437859 - 59 2.51e-09 TCTAATCTTT CGCCTTAACCACTCGGCCAAGTTGC CTTACTAATG chrXII:605327-605535 + 26 2.51e-09 ATAAGCACGA AGCTCTAACCACTGAGCTACACGAG CATTTTCGAA chrVIII:132990-133233 + 21 2.51e-09 TCTAATCTTT CGCCTTAACCACTCGGCCAAGTTGC CACTTATTAT chrVI:226579-226855 + 68 3.48e-09 AAGAGTCATA CGCGCTACCGATTGCGCCAACAAGG CATTTTAA chrIV:1352470-1352604 + 26 3.48e-09 AAGAGTCATA CGCGCTACCGATTGCGCCAACAAGG CTATTTCGTT chrVII:185715-185796 + 46 3.48e-09 AAGAGTCATA CGCGCTACCGATTGCGCCAACAAGG CTATTTCGTT chrV:435736-435894 + 34 3.48e-09 AAGAGTCATA CGCGCTACCGATTGCGCCAACAAGG CTCTTATTGT chrXIII:480624-480778 + 17 3.48e-09 AAGAGTCATA CGCGCTACCGATTGCGCCAACAAGG CTACTTATTG chrV:135406-135579 + 30 3.48e-09 AAGAGTCATA CGCGCTACCGATTGCGCCAACAAGG CTTTTTTCTT chrVII:876298-876454 - 69 3.48e-09 AGTCATA CGCGCTACCGATTGCGCCAACAAGG CTATTCTATT chrIII:151282-151447 + 17 3.48e-09 AAGAGTCATA CGCGCTACCGATTGCGCCAACAAGG CTCTTTAATT chrIV:1201650-1201827 - 63 3.48e-09 AAGAGTCATA CGCGCTACCGATTGCGCCAACAAGG CTATTTATTT chrX:414859-415036 - 70 3.48e-09 GTCATA CGCGCTACCGATTGCGCCAACAAGG CTAATTCGTT chrIX:300225-300411 + 7 3.48e-09 GTCATA CGCGCTACCGATTGCGCCAACAAGG CTATTTCGTT chrXII:975876-976152 + 67 7.54e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATGGAGT CTTTTATTT chrXI:74542-74690 - 59 7.54e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATGGAGT CTAATTGCTA chrXIV:632498-632672 - 65 7.54e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATGGAGT CACTTTAAAT chrXVI:810585-810757 - 56 7.54e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATGGAGT CGCAAATAAT chrIII:127613-127801 - 60 7.54e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATGGAGT CATTTTATCT chrXIV:102610-102791 - 67 7.54e-09 CAGTCGCAC GCCTTAACCAACTTGGCCATGGAGT CTTATAATAT chrVII:731023-731246 - 54 7.54e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATGGAGT CTTTTTGACT chrXV:228217-228409 - 69 7.54e-09 GTCGCAC GCCTTAACCAACTTGGCCATGGAGT CTAATATTTT chrVI:137437-137651 + 40 7.54e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATGGAGT CAGTCACTTT chrXII:592502-592692 + 47 1.35e-08 TAAATCTGAC GCCTTAAACCACTCGGCCAAACTCC CATTGTATGT chrX:617803-618020 - 59 1.35e-08 TAAATCTGAC GCCTTAAACCACTCGGCCAAACTCC CATTGTTTGT chrV:438608-438766 - 64 2.03e-08 TTAAGCAGAT GCCATAACCGACTAGACCACGAAAC CTAATTTGTT chrXIII:420573-420740 + 30 2.03e-08 TTAAGCAGAT GCCATAACCGACTAGACCACGAAAC CTGTTATTTG chrXV:663780-663952 + 44 2.03e-08 TTAAGCAGAT GCCATAACCGACTAGACCACGAAAC CACTATTTGT chrX:378260-378433 - 65 2.03e-08 TTAAGCAGAT GCCATAACCGACTAGACCACGAAAC CTATTAATTT chrXIII:586589-586778 + 51 2.03e-08 TTAAGCAGAT GCCATAACCGACTAGACCACGAAAC CATAGTAAGT chrV:469360-469544 - 56 2.03e-08 TTAAGCAGAT GCCATAACCGACTAGACCACGAAAC CAATTATTTC chrXI:308141-308314 + 15 2.03e-08 TTAAGCAGAT GCCATAACCGACTAGACCACGAAAC CACTTAATTG chrXIII:372404-372585 + 49 2.03e-08 TTAAGCAGAT GCCATAACCGACTAGACCACGAAAC CAGGTTTTAT chrVII:823395-823576 - 48 2.03e-08 TTAAGCAGAT GCCATAACCGACTAGACCACGAAAC CACTCTTATT chrXI:379580-379749 - 67 2.03e-08 TAAGCAGAT GCCATAACCGACTAGACCACGAAAC CTATTAATCT chrVII:412255-412482 + 24 2.03e-08 TTAAGCAGAT GCCATAACCGACTAGACCACGAAAC CAGTTTTTTG chrIV:619937-620100 + 48 2.33e-08 CGTAGCCAGA CGCCGTGACCATTGGGCCACGAGGA ACAAGATTTC chrX:233832-234006 - 71 2.33e-08 CCAGA CGCCGTGACCATTGGGCCACGAGGA ACAAGAATAT chrXII:374238-374467 - 54 2.33e-08 CGTAGCCAGA CGCCGTGACCATTGGGCCACGAGGA ACAAGATTTA chrXV:976401-976493 - 21 5.64e-08 ATGAGACTGA CGCTCTTCCTACTGAGCTACTGAAG CGCACAAAAT chrXIII:572858-573060 + 21 5.64e-08 ATGAGACTGA CGCTCTTCCTACTGAGCTACTGAAG CTGTCTGTTA chrX:391017-391244 + 10 5.64e-08 TGAGACTGA CGCTCTTCCTACTGAGCTACTGAAG CACTATTTCT chrX:422832-423062 - 41 5.64e-08 ATGAGACTGA CGCTCTTCCTACTGAGCTACTGAAG CATACAAAGG chrIV:1175714-1175953 - 47 5.64e-08 ATGAGACTGA CGCTCTTCCTACTGAGCTACTGAAG CTTTGTTTTG chrXI:84067-84343 - 54 6.36e-08 TAAGTCTGCC GCCTTAGACCACTCGGCCAACCCTC CATACAAATT chrIV:519680-519778 - 64 6.36e-08 TAAGTCTGCC GCCTTAGACCACTCGGCCAACCCTC CGTAAAATCA chrXII:962998-963141 + 11 6.36e-08 TAAGTCTGCC GCCTTAGACCACTCGGCCAACCCTC CGTCGATAAT chrX:424435-424636 + 5 6.36e-08 TGCC GCCTTAGACCACTCGGCCAACCCTC CATCTTATTT chrXI:458523-458615 - 35 9.02e-08 TGAATCAGGC GCCTTAGACCGCTCGGCCAAACAAC CACTTATTTG chrXVI:572127-572403 - 55 9.02e-08 TGGCAACGTT GGATTTTACCACTAAACCACTTGCG CGAAGTATTG chrVII:930959-931124 + 7 9.02e-08 AACGTT GGATTTTACCACTAAACCACTTGCG CTTACTGATT chrX:531754-531890 - 57 9.02e-08 TGGCAACGTT GGATTTTACCACTAAACCACTTGCG CTCACTAATT chrVII:857454-857565 + 7 9.02e-08 TCAGGC GCCTTAGACCGCTCGGCCAAACAAC CACTTATTTG chrVI:180955-181137 + 23 9.02e-08 TGGCAACGTT GGATTTTACCACTAAACCACTTGCG CTTATTTCTT chrX:396719-396889 + 17 9.02e-08 TGGCAACGTT GGATTTTACCACTAAACCACTTGCG CTTACTTTTG chrIV:1095378-1095576 + 9 9.02e-08 CAGTCTGG CGCTCTCCCAACTGAGCTAAGTCCG CTAACATAAG chrV:61886-62050 + 17 9.02e-08 TGGCAACGTT GGATTTTACCACTAAACCACTTGCG CTTACTATTT chrVII:845545-845749 - 53 9.02e-08 TGGCAACGTT GGATTTTACCACTAAACCACTTGCG CTTGTTATTT chrXIV:442923-443090 - 51 9.02e-08 TGAATCAGGC GCCTTAGACCGCTCGGCCAAACAAC CACTTATTTG chrIV:83451-83626 - 61 9.02e-08 TGGCAACGTT GGATTTTACCACTAAACCACTTGCG CTAAGTGAAC chrIII:90805-91010 - 3 9.02e-08 TGAATCAGGC GCCTTAGACCGCTCGGCCAAACAAC CA chrIV:992728-992893 - 73 9.02e-08 GTT GGATTTTACCACTAAACCACTTGCG CTCACAATTG chrVI:162113-162301 - 72 9.02e-08 CGTT GGATTTTACCACTAAACCACTTGCG CTTGTTTTCT chrVII:205413-205596 - 68 9.02e-08 AATCAGGC GCCTTAGACCGCTCGGCCAAACAAC CACTTATTTG chrIII:142688-142884 + 10 9.02e-08 GGCAACGTT GGATTTTACCACTAAACCACTTGCG CTAGTAATCT chrXV:226604-226796 + 6 9.02e-08 ACGTT GGATTTTACCACTAAACCACTTGCG CTGAATTTCT chrXV:464344-464620 - 19 1.26e-07 CCCAAAGCGA GAATCATACCACTAGACCACACGCC CTTGTTAACT chrXIII:196097-196273 + 10 1.26e-07 CCAAAGCGA GAATCATACCACTAGACCACACGCC CTTGTGAACT chrXIV:568039-568204 - 45 1.26e-07 CCCAAAGCGA GAATCATACCACTAGACCACACGCC CGATTATTTT chrI:139074-139237 - 48 1.26e-07 CCCAAAGCGA GAATCATACCACTAGACCACACGCC CGTACTAATT chrVIII:388911-389107 + 11 1.26e-07 CCCAAAGCGA GAATCATACCACTAGACCACACGCC CATGTATCTG chrXV:300978-301182 - 68 1.26e-07 CAAAGCGA GAATCATACCACTAGACCACACGCC CGATCTTTTC chrXVI:560217-560327 + 42 1.74e-07 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAATCCG CTCAATTTCT chrVIII:358492-358661 + 18 1.74e-07 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAATCCG CTTACTATTT chrVII:440692-440913 + 30 1.74e-07 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAATCCG CATATATTTT chrVIII:237832-238036 + 30 1.74e-07 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAATCCG CTTACTATTT chrVI:157925-158128 + 6 1.74e-07 TCTGG CGCTCTCCCAACTGAGCTAAATCCG CTTCTATTTA chrVIII:466947-467058 - 39 2.89e-07 TACAAGTGCA ACGCTCTACCACTAAGCTAAGGAGG CTAAAAATAC chrVII:1004135-1004324 - 38 2.89e-07 TACAAGTGCA ACGCTCTACCACTAAGCTAAGGAGG CAAACCCTTG chrXVI:744175-744429 - 33 2.89e-07 TACAAGTGCA ACGCTCTACCACTAAGCTAAGGAGG CTTTTACACT chrVII:661628-661853 - 60 2.89e-07 TACAAGTGCA ACGCTCTACCACTAAGCTAAGGAGG CAAATTTTTA chrXV:594337-594470 + 47 3.51e-07 GGGAAGCATA AATTCTAACCACTGAACCACTTGCG CGTTTCAATC chrXIII:168738-168878 - 38 3.86e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACCGAGA GTGACTATTT chrXV:288148-288300 - 19 3.86e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACCGAGA GAAGCTATTT chrX:354158-354358 - 37 3.86e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACCGAGA GTGATAAATG chrVI:167333-167516 - 64 3.86e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACCGAGA GTCGTTTTTG chrVI:210615-210820 + 15 3.86e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACCGAGA GTCGTTTTTG chrXIII:837807-838034 - 59 3.86e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACCGAGA GTCAATTAAC chrX:542921-543163 + 27 3.86e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACCGAGA GTATTTAATT chrX:374506-374651 + 24 1.01e-06 TAGAAGTCAG ACGCGTTGCCATTACGCCACGCGAG CTACTATTTG chrII:405787-405941 - 65 1.01e-06 TAGAAGTCAG ACGCGTTGCCATTACGCCACGCGAG CTACTATTTG chrXI:162406-162624 + 68 1.01e-06 TAGAAGTCAG ACGCGTTGCCATTACGCCACGCGAG CTAATATT chrVII:828683-828906 + 25 1.01e-06 TAGAAGTCAG ACGCGTTGCCATTACGCCACGCGAG CTACTGTTTG chrVII:736234-736426 - 61 1.01e-06 TAGAAGTCAG ACGCGTTGCCATTACGCCACGCGAG CTATTGAAAT chrXIII:131785-132001 + 28 1.01e-06 TAGAAGTCAG ACGCGTTGCCATTACGCCACGCGAG CTAAATTTCT chrV:138546-138782 - 53 1.01e-06 TAGAAGTCAG ACGCGTTGCCATTACGCCACGCGAG CATTATTTAT chrXV:110960-111087 + 35 1.10e-06 GGAAGGGTGG GATGATAACCACTACACTAACCGCC CGGGTTAATT chrIV:802694-802830 + 65 1.10e-06 CAAAACCGAA AGTGATAACCACTACACTATAGGAC CGACAATTCA chrVII:779514-779679 - 71 1.10e-06 GGTGG GATGATAACCACTACACTAACCGCC CGGGGTTAAC chrIV:520877-521041 - 64 1.10e-06 CAAAACCGAA AGTGATAACCACTACACTATAGGAC CCTAAAATGG chrVIII:134207-134435 - 51 1.10e-06 CAAAACCGAA AGTGATAACCACTACACTATAGGAC CGGAACTTAC chrXIV:96201-96401 + 36 1.10e-06 GGAAGGGTGG GATGATAACCACTACACTAACCGCC CATGTGTTGG chrIII:168291-168483 + 10 1.10e-06 AAAACCGAA AGTGATAACCACTACACTATAGGAC CAGGACTTCT chrV:431253-431471 + 29 1.10e-06 AAAAAATGCG CACCTTTACCGCTAGCCCAAGAGGG CACTACAAAA chrXII:448599-448812 + 41 1.10e-06 CAAAACCGAA AGTGATAACCACTACACTATAGGAC CGGAACTTCT chrXIII:808205-808437 + 21 1.10e-06 CAGAACCGAA AGTGATAACCACTACACTATAGGAC CTTTTTCTTC chrX:538484-538659 - 35 1.50e-06 TAGGAGGGAG ACGCGTTACCATTACGCCAACGGAA CCAACTTGGT chrIV:488750-488962 + 39 1.50e-06 TAAAGGCGAC GTCTTGAACCACTGGACCATTGGAC CGGAAACCCA chrXVI:775772-775940 + 5 2.17e-06 TCTG CTGCGCTACCACTGCGCCATACGAG CTTTTGAATT chrXVI:435872-436066 + 20 2.17e-06 TTGCAATCTG CTGCGCTACCACTGCGCCATACGAG CTTTTGTTGT chrXI:513353-513479 + 12 3.27e-06 GACAAGCGCC CATTCTGACCATTAAACTATCACGG AACGTTATTT chrVII:544591-544708 + 24 3.27e-06 GACAAGCGCC CATTCTGACCATTAAACTATCACGG AAGAAATATC chrXIII:463471-463630 - 55 3.27e-06 GACAAGCGCC CATTCTGACCATTAAACTATCACGG ACAAATTTCT chrVII:531529-531676 - 59 3.27e-06 GACAAGCGCC CATTCTGACCATTAAACTATCACGG AAGTAACTCG chrXV:571847-572041 - 65 3.27e-06 GACAAGCGCC CATTCTGACCATTAAACTATCACGG ATTTTAATTG chrIX:324301-324481 + 8 3.27e-06 AAGCGCC CATTCTGACCATTAAACTATCACGG AATATTAGAT chrXII:427016-427207 - 72 3.27e-06 CGCC CATTCTGACCATTAAACTATCACGG ATAAGAAACA chrXIV:631888-631989 + 4 4.76e-06 CGA GAATCATACCTCTAGACCACACGCC CGGTAGAAGT chrXII:818531-818710 - 40 7.13e-06 CGGAAGAATG CATGCTAACCATTGCACTAGAGGAG CATAATAAAT chrXII:459654-459887 - 27 1.08e-05 AGTTTCGCGT ATGGTCACCCACTACACTACTCGGT CAGGCTCTTA chrXVI:56134-56339 + 63 1.37e-05 TTGGAGTCGA AAGCTCTACCATTGAGCCACCGCTT CAACTATTGT chrVII:287307-287562 + 46 1.37e-05 TTGGAGTCGA AAGCTCTACCATTGAGCCACCGCTT CATCTTGAAA chrXIII:379308-379518 + 20 1.37e-05 TTGGAGTCGA AAGCTCTACCATTGAGCCACCGCTT CAACTTTTAT chrX:415936-416142 + 22 1.37e-05 TTGGAGTCGA AAGCTCTACCATTGAGCCACCGCTT CAACTTTTGT chrXI:302800-303037 - 51 1.37e-05 TTGGAGTCGA AAGCTCTACCATTGAGCCACCGCTT CATCTTGGAA chrVIII:475676-475865 + 33 1.50e-05 GTGAAGGCAA CGTGATAGCCGCTACACTATTGGAA CAGACTTTTA chrIV:1075420-1075657 + 31 1.50e-05 GTGAAGGCAA CGTGATAGCCGCTACACTATTGGAA CAATATTACG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCYYWAMCMACTRVGCCAHVVRVS MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrV:551295-551384 7.8e-11 37_[+1]_27 chrXII:1052084-1052182 7.8e-11 34_[+1]_39 chrV:443187-443329 7.8e-11 41_[+1]_34 chrIX:183437-183616 7.8e-11 11_[+1]_64 chrXVI:880293-880472 7.8e-11 11_[+1]_64 chrVII:739047-739204 7.8e-11 47_[-1]_28 chrXVI:819431-819619 7.8e-11 54_[-1]_21 chrXII:734698-734889 7.8e-11 59_[-1]_16 chrII:197380-197574 7.8e-11 67_[-1]_8 chrXIII:321173-321296 2.8e-10 9_[+1]_66 chrXII:656964-657066 2.8e-10 15_[+1]_60 chrXI:219797-219960 2.8e-10 67_[-1]_8 chrIV:1150869-1151045 3.4e-10 8_[+1]_67 chrXII:784270-784437 3.4e-10 51_[-1]_24 chrXV:274551-274757 3.4e-10 69_[-1]_6 chrVI:191522-191702 3.4e-10 25_[+1]_50 chrXIV:560653-560786 6.1e-10 70_[+1]_5 chrVII:794346-794481 6.1e-10 54_[-1]_21 chrXII:214892-215018 6.1e-10 24_[+1]_51 chrIV:434268-434399 6.1e-10 27_[+1]_48 chrXV:113719-113874 6.1e-10 56_[-1]_19 chrI:166185-166382 6.1e-10 34_[-1]_41 chrII:266310-266476 6.1e-10 35_[-1]_40 chrXIV:104727-104899 6.1e-10 42_[-1]_33 chrVIII:116083-116285 6.1e-10 19_[+1]_56 chrX:59093-59281 6.1e-10 9_[+1]_66 chrIX:325653-325854 6.1e-10 45_[-1]_30 chrXII:875286-875454 7.4e-10 56_[-1]_19 chrXV:438547-438725 7.4e-10 57_[-1]_18 chrVII:115382-115573 7.4e-10 61_[-1]_14 chrXI:578872-579132 7.4e-10 13_[-1]_62 chrVII:700961-701157 7.4e-10 13_[+1]_62 chrIV:359479-359669 7.4e-10 53_[-1]_22 chrXVI:769191-769409 7.4e-10 26_[+1]_49 chrV:288399-288621 2.1e-09 38_[+1]_37 chrXVI:689455-689675 2.1e-09 50_[-1]_25 chrIII:227823-228041 2.1e-09 60_[-1]_15 chrV:86509-86686 2.5e-09 57_[-1]_18 chrX:524002-524188 2.5e-09 22_[+1]_53 chrII:226979-227167 2.5e-09 52_[-1]_23 chrIV:437669-437859 2.5e-09 58_[-1]_17 chrXII:605327-605535 2.5e-09 25_[+1]_50 chrVIII:132990-133233 2.5e-09 20_[+1]_55 chrVI:226579-226855 3.5e-09 67_[+1]_8 chrIV:1352470-1352604 3.5e-09 25_[+1]_50 chrVII:185715-185796 3.5e-09 45_[+1]_11 chrV:435736-435894 3.5e-09 33_[+1]_42 chrXIII:480624-480778 3.5e-09 16_[+1]_59 chrV:135406-135579 3.5e-09 29_[+1]_46 chrVII:876298-876454 3.5e-09 68_[-1]_7 chrIII:151282-151447 3.5e-09 16_[+1]_59 chrIV:1201650-1201827 3.5e-09 62_[-1]_13 chrX:414859-415036 3.5e-09 69_[-1]_6 chrIX:300225-300411 3.5e-09 6_[+1]_69 chrXII:975876-976152 7.5e-09 66_[+1]_9 chrXI:74542-74690 7.5e-09 58_[-1]_17 chrXIV:632498-632672 7.5e-09 64_[-1]_11 chrXVI:810585-810757 7.5e-09 55_[-1]_20 chrIII:127613-127801 7.5e-09 59_[-1]_16 chrXIV:102610-102791 7.5e-09 66_[-1]_9 chrVII:731023-731246 7.5e-09 53_[-1]_22 chrXV:228217-228409 7.5e-09 68_[-1]_7 chrVI:137437-137651 7.5e-09 39_[+1]_36 chrXII:592502-592692 1.3e-08 46_[+1]_29 chrX:617803-618020 1.3e-08 58_[-1]_17 chrV:438608-438766 2e-08 63_[-1]_12 chrXIII:420573-420740 2e-08 29_[+1]_46 chrXV:663780-663952 2e-08 43_[+1]_32 chrX:378260-378433 2e-08 64_[-1]_11 chrXIII:586589-586778 2e-08 50_[+1]_25 chrV:469360-469544 2e-08 55_[-1]_20 chrXI:308141-308314 2e-08 14_[+1]_61 chrXIII:372404-372585 2e-08 48_[+1]_27 chrVII:823395-823576 2e-08 47_[-1]_28 chrXI:379580-379749 2e-08 66_[-1]_9 chrVII:412255-412482 2e-08 23_[+1]_52 chrIV:619937-620100 2.3e-08 47_[+1]_28 chrX:233832-234006 2.3e-08 70_[-1]_5 chrXII:374238-374467 2.3e-08 53_[-1]_22 chrXV:976401-976493 5.6e-08 20_[-1]_47 chrXIII:572858-573060 5.6e-08 20_[+1]_55 chrX:391017-391244 5.6e-08 9_[+1]_66 chrX:422832-423062 5.6e-08 40_[-1]_35 chrIV:1175714-1175953 5.6e-08 46_[-1]_29 chrXI:84067-84343 6.4e-08 53_[-1]_22 chrIV:519680-519778 6.4e-08 63_[-1]_10 chrXII:962998-963141 6.4e-08 10_[+1]_65 chrX:424435-424636 6.4e-08 4_[+1]_71 chrXI:458523-458615 9e-08 34_[-1]_33 chrXVI:572127-572403 9e-08 54_[-1]_21 chrVII:930959-931124 9e-08 6_[+1]_69 chrX:531754-531890 9e-08 56_[-1]_19 chrVII:857454-857565 9e-08 6_[+1]_69 chrVI:180955-181137 9e-08 22_[+1]_53 chrX:396719-396889 9e-08 16_[+1]_59 chrIV:1095378-1095576 9e-08 8_[+1]_67 chrV:61886-62050 9e-08 16_[+1]_59 chrVII:845545-845749 9e-08 52_[-1]_23 chrXIV:442923-443090 9e-08 50_[-1]_25 chrIV:83451-83626 9e-08 60_[-1]_15 chrIII:90805-91010 9e-08 2_[-1]_73 chrIV:992728-992893 9e-08 72_[-1]_3 chrVI:162113-162301 9e-08 71_[-1]_4 chrVII:205413-205596 9e-08 67_[-1]_8 chrIII:142688-142884 9e-08 9_[+1]_66 chrXV:226604-226796 9e-08 5_[+1]_70 chrXV:464344-464620 1.3e-07 18_[-1]_57 chrXIII:196097-196273 1.3e-07 9_[+1]_66 chrXIV:568039-568204 1.3e-07 44_[-1]_31 chrI:139074-139237 1.3e-07 47_[-1]_28 chrVIII:388911-389107 1.3e-07 10_[+1]_65 chrXV:300978-301182 1.3e-07 67_[-1]_8 chrXVI:560217-560327 1.7e-07 41_[+1]_34 chrVIII:358492-358661 1.7e-07 17_[+1]_58 chrVII:440692-440913 1.7e-07 29_[+1]_46 chrVIII:237832-238036 1.7e-07 29_[+1]_46 chrVI:157925-158128 1.7e-07 5_[+1]_70 chrVIII:466947-467058 2.9e-07 38_[-1]_37 chrVII:1004135-1004324 2.9e-07 37_[-1]_38 chrXVI:744175-744429 2.9e-07 32_[-1]_43 chrVII:661628-661853 2.9e-07 59_[-1]_16 chrXV:594337-594470 3.5e-07 46_[+1]_29 chrXIII:168738-168878 3.9e-07 37_[-1]_38 chrXV:288148-288300 3.9e-07 18_[-1]_57 chrX:354158-354358 3.9e-07 36_[-1]_39 chrVI:167333-167516 3.9e-07 63_[-1]_12 chrVI:210615-210820 3.9e-07 14_[+1]_61 chrXIII:837807-838034 3.9e-07 58_[-1]_17 chrX:542921-543163 3.9e-07 26_[+1]_49 chrX:374506-374651 1e-06 23_[+1]_52 chrII:405787-405941 1e-06 64_[-1]_11 chrXI:162406-162624 1e-06 67_[+1]_8 chrVII:828683-828906 1e-06 24_[+1]_51 chrVII:736234-736426 1e-06 60_[-1]_15 chrXIII:131785-132001 1e-06 27_[+1]_48 chrV:138546-138782 1e-06 52_[-1]_23 chrXV:110960-111087 1.1e-06 34_[+1]_41 chrIV:802694-802830 1.1e-06 64_[+1]_11 chrVII:779514-779679 1.1e-06 70_[-1]_5 chrIV:520877-521041 1.1e-06 63_[-1]_12 chrVIII:134207-134435 1.1e-06 50_[-1]_25 chrXIV:96201-96401 1.1e-06 35_[+1]_40 chrIII:168291-168483 1.1e-06 9_[+1]_66 chrV:431253-431471 1.1e-06 28_[+1]_47 chrXII:448599-448812 1.1e-06 40_[+1]_35 chrXIII:808205-808437 1.1e-06 20_[+1]_55 chrX:538484-538659 1.5e-06 34_[-1]_41 chrIV:488750-488962 1.5e-06 38_[+1]_37 chrXVI:775772-775940 2.2e-06 4_[+1]_71 chrXVI:435872-436066 2.2e-06 19_[+1]_56 chrXI:513353-513479 3.3e-06 11_[+1]_64 chrVII:544591-544708 3.3e-06 23_[+1]_52 chrXIII:463471-463630 3.3e-06 54_[-1]_21 chrVII:531529-531676 3.3e-06 58_[-1]_17 chrXV:571847-572041 3.3e-06 64_[-1]_11 chrIX:324301-324481 3.3e-06 7_[+1]_68 chrXII:427016-427207 3.3e-06 71_[-1]_4 chrXIV:631888-631989 4.8e-06 3_[+1]_72 chrXII:818531-818710 7.1e-06 39_[-1]_36 chrXII:459654-459887 1.1e-05 26_[-1]_49 chrXVI:56134-56339 1.4e-05 62_[+1]_13 chrVII:287307-287562 1.4e-05 45_[+1]_30 chrXIII:379308-379518 1.4e-05 19_[+1]_56 chrX:415936-416142 1.4e-05 21_[+1]_54 chrXI:302800-303037 1.4e-05 50_[-1]_25 chrVIII:475676-475865 1.5e-05 32_[+1]_43 chrIV:1075420-1075657 1.5e-05 30_[+1]_45 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCYYWAMCMACTRVGCCAHVVRVS MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SSCYYWAMCMACTRVGCCAHVVRVS width=25 seqs=167 chrV:551295-551384 ( 38) GCCTTAACCAACTGGGCCAAGAGAC 1 chrXII:1052084-1052182 ( 35) GCCTTAACCAACTGGGCCAAGAGAC 1 chrV:443187-443329 ( 42) GCCTTAACCAACTGGGCCAAGAGAC 1 chrIX:183437-183616 ( 12) GCCTTAACCAACTGGGCCAAGAGAC 1 chrXVI:880293-880472 ( 12) GCCTTAACCAACTGGGCCAAGAGAC 1 chrVII:739047-739204 ( 48) GCCTTAACCAACTGGGCCAAGAGAC 1 chrXVI:819431-819619 ( 55) GCCTTAACCAACTGGGCCAAGAGAC 1 chrXII:734698-734889 ( 60) GCCTTAACCAACTGGGCCAAGAGAC 1 chrII:197380-197574 ( 68) GCCTTAACCAACTGGGCCAAGAGAC 1 chrXIII:321173-321296 ( 10) CGCGCTACCGACTACGCCACACGCC 1 chrXII:656964-657066 ( 16) CGCGCTACCGACTACGCCACACGCC 1 chrXI:219797-219960 ( 68) CGCGCTACCGACTACGCCACACGCC 1 chrIV:1150869-1151045 ( 9) CGCCTTAACCACTCGGCCACTGGGA 1 chrXII:784270-784437 ( 52) CGCCTTAACCACTCGGCCACTGGGA 1 chrXV:274551-274757 ( 70) CGCCTTAACCACTCGGCCACTGGGA 1 chrVI:191522-191702 ( 26) CGCCTTAACCACTCGGCCACTGGGA 1 chrXIV:560653-560786 ( 71) CGCCTTACCAACTTGGCCATAGAAG 1 chrVII:794346-794481 ( 55) CGCGCTACCAACTGCGCCATGTGCC 1 chrXII:214892-215018 ( 25) CGCGCTACCAACTGCGCCATGTGCC 1 chrIV:434268-434399 ( 28) CGCCTTACCAACTTGGCCATAGAAG 1 chrXV:113719-113874 ( 57) CGCCTTACCAACTTGGCCATAGAAG 1 chrI:166185-166382 ( 35) CGCGCTACCAACTGCGCCATGTGCC 1 chrII:266310-266476 ( 36) CGCCTTACCAACTTGGCCATAGAAG 1 chrXIV:104727-104899 ( 43) CGCCTTACCAACTTGGCCATAGAAG 1 chrVIII:116083-116285 ( 20) CGCCTTACCAACTTGGCCATAGAAG 1 chrX:59093-59281 ( 10) CGCCTTACCAACTTGGCCATAGAAG 1 chrIX:325653-325854 ( 46) CGCCTTACCAACTTGGCCATAGAAG 1 chrXII:875286-875454 ( 57) CGCTCTACCAACTGAGCTAACAAGG 1 chrXV:438547-438725 ( 58) CGCTCTACCAACTGAGCTAACAAGG 1 chrVII:115382-115573 ( 62) CGCTCTACCAACTGAGCTAACAAGG 1 chrXI:578872-579132 ( 14) CGCTCTACCAACTGAGCTAACAAGG 1 chrVII:700961-701157 ( 14) CGCTCTACCAACTGAGCTAACAAGG 1 chrIV:359479-359669 ( 54) CGCTCTACCAACTGAGCTAACAAGG 1 chrXVI:769191-769409 ( 27) CGCTCTACCAACTGAGCTAACAAGG 1 chrV:288399-288621 ( 39) CGCCTTAACCACTCGGCCATAGTGC 1 chrXVI:689455-689675 ( 51) CGCCTTAACCACTCGGCCATAGTGC 1 chrIII:227823-228041 ( 61) CGCCTTAACCACTCGGCCATAGTGC 1 chrV:86509-86686 ( 58) CGCCTTAACCACTCGGCCAAGTTGC 1 chrX:524002-524188 ( 23) CGCCTTAACCACTCGGCCAAGTTGC 1 chrII:226979-227167 ( 53) CGCCTTAACCACTCGGCCAAGTTGC 1 chrIV:437669-437859 ( 59) CGCCTTAACCACTCGGCCAAGTTGC 1 chrXII:605327-605535 ( 26) AGCTCTAACCACTGAGCTACACGAG 1 chrVIII:132990-133233 ( 21) CGCCTTAACCACTCGGCCAAGTTGC 1 chrVI:226579-226855 ( 68) CGCGCTACCGATTGCGCCAACAAGG 1 chrIV:1352470-1352604 ( 26) CGCGCTACCGATTGCGCCAACAAGG 1 chrVII:185715-185796 ( 46) CGCGCTACCGATTGCGCCAACAAGG 1 chrV:435736-435894 ( 34) CGCGCTACCGATTGCGCCAACAAGG 1 chrXIII:480624-480778 ( 17) CGCGCTACCGATTGCGCCAACAAGG 1 chrV:135406-135579 ( 30) CGCGCTACCGATTGCGCCAACAAGG 1 chrVII:876298-876454 ( 69) CGCGCTACCGATTGCGCCAACAAGG 1 chrIII:151282-151447 ( 17) CGCGCTACCGATTGCGCCAACAAGG 1 chrIV:1201650-1201827 ( 63) CGCGCTACCGATTGCGCCAACAAGG 1 chrX:414859-415036 ( 70) CGCGCTACCGATTGCGCCAACAAGG 1 chrIX:300225-300411 ( 7) CGCGCTACCGATTGCGCCAACAAGG 1 chrXII:975876-976152 ( 67) GCCTTAACCAACTTGGCCATGGAGT 1 chrXI:74542-74690 ( 59) GCCTTAACCAACTTGGCCATGGAGT 1 chrXIV:632498-632672 ( 65) GCCTTAACCAACTTGGCCATGGAGT 1 chrXVI:810585-810757 ( 56) GCCTTAACCAACTTGGCCATGGAGT 1 chrIII:127613-127801 ( 60) GCCTTAACCAACTTGGCCATGGAGT 1 chrXIV:102610-102791 ( 67) GCCTTAACCAACTTGGCCATGGAGT 1 chrVII:731023-731246 ( 54) GCCTTAACCAACTTGGCCATGGAGT 1 chrXV:228217-228409 ( 69) GCCTTAACCAACTTGGCCATGGAGT 1 chrVI:137437-137651 ( 40) GCCTTAACCAACTTGGCCATGGAGT 1 chrXII:592502-592692 ( 47) GCCTTAAACCACTCGGCCAAACTCC 1 chrX:617803-618020 ( 59) GCCTTAAACCACTCGGCCAAACTCC 1 chrV:438608-438766 ( 64) GCCATAACCGACTAGACCACGAAAC 1 chrXIII:420573-420740 ( 30) GCCATAACCGACTAGACCACGAAAC 1 chrXV:663780-663952 ( 44) GCCATAACCGACTAGACCACGAAAC 1 chrX:378260-378433 ( 65) GCCATAACCGACTAGACCACGAAAC 1 chrXIII:586589-586778 ( 51) GCCATAACCGACTAGACCACGAAAC 1 chrV:469360-469544 ( 56) GCCATAACCGACTAGACCACGAAAC 1 chrXI:308141-308314 ( 15) GCCATAACCGACTAGACCACGAAAC 1 chrXIII:372404-372585 ( 49) GCCATAACCGACTAGACCACGAAAC 1 chrVII:823395-823576 ( 48) GCCATAACCGACTAGACCACGAAAC 1 chrXI:379580-379749 ( 67) GCCATAACCGACTAGACCACGAAAC 1 chrVII:412255-412482 ( 24) GCCATAACCGACTAGACCACGAAAC 1 chrIV:619937-620100 ( 48) CGCCGTGACCATTGGGCCACGAGGA 1 chrX:233832-234006 ( 71) CGCCGTGACCATTGGGCCACGAGGA 1 chrXII:374238-374467 ( 54) CGCCGTGACCATTGGGCCACGAGGA 1 chrXV:976401-976493 ( 21) CGCTCTTCCTACTGAGCTACTGAAG 1 chrXIII:572858-573060 ( 21) CGCTCTTCCTACTGAGCTACTGAAG 1 chrX:391017-391244 ( 10) CGCTCTTCCTACTGAGCTACTGAAG 1 chrX:422832-423062 ( 41) CGCTCTTCCTACTGAGCTACTGAAG 1 chrIV:1175714-1175953 ( 47) CGCTCTTCCTACTGAGCTACTGAAG 1 chrXI:84067-84343 ( 54) GCCTTAGACCACTCGGCCAACCCTC 1 chrIV:519680-519778 ( 64) GCCTTAGACCACTCGGCCAACCCTC 1 chrXII:962998-963141 ( 11) GCCTTAGACCACTCGGCCAACCCTC 1 chrX:424435-424636 ( 5) GCCTTAGACCACTCGGCCAACCCTC 1 chrXI:458523-458615 ( 35) GCCTTAGACCGCTCGGCCAAACAAC 1 chrXVI:572127-572403 ( 55) GGATTTTACCACTAAACCACTTGCG 1 chrVII:930959-931124 ( 7) GGATTTTACCACTAAACCACTTGCG 1 chrX:531754-531890 ( 57) GGATTTTACCACTAAACCACTTGCG 1 chrVII:857454-857565 ( 7) GCCTTAGACCGCTCGGCCAAACAAC 1 chrVI:180955-181137 ( 23) GGATTTTACCACTAAACCACTTGCG 1 chrX:396719-396889 ( 17) GGATTTTACCACTAAACCACTTGCG 1 chrIV:1095378-1095576 ( 9) CGCTCTCCCAACTGAGCTAAGTCCG 1 chrV:61886-62050 ( 17) GGATTTTACCACTAAACCACTTGCG 1 chrVII:845545-845749 ( 53) GGATTTTACCACTAAACCACTTGCG 1 chrXIV:442923-443090 ( 51) GCCTTAGACCGCTCGGCCAAACAAC 1 chrIV:83451-83626 ( 61) GGATTTTACCACTAAACCACTTGCG 1 chrIII:90805-91010 ( 3) GCCTTAGACCGCTCGGCCAAACAAC 1 chrIV:992728-992893 ( 73) GGATTTTACCACTAAACCACTTGCG 1 chrVI:162113-162301 ( 72) GGATTTTACCACTAAACCACTTGCG 1 chrVII:205413-205596 ( 68) GCCTTAGACCGCTCGGCCAAACAAC 1 chrIII:142688-142884 ( 10) GGATTTTACCACTAAACCACTTGCG 1 chrXV:226604-226796 ( 6) GGATTTTACCACTAAACCACTTGCG 1 chrXV:464344-464620 ( 19) GAATCATACCACTAGACCACACGCC 1 chrXIII:196097-196273 ( 10) GAATCATACCACTAGACCACACGCC 1 chrXIV:568039-568204 ( 45) GAATCATACCACTAGACCACACGCC 1 chrI:139074-139237 ( 48) GAATCATACCACTAGACCACACGCC 1 chrVIII:388911-389107 ( 11) GAATCATACCACTAGACCACACGCC 1 chrXV:300978-301182 ( 68) GAATCATACCACTAGACCACACGCC 1 chrXVI:560217-560327 ( 42) CGCTCTCCCAACTGAGCTAAATCCG 1 chrVIII:358492-358661 ( 18) CGCTCTCCCAACTGAGCTAAATCCG 1 chrVII:440692-440913 ( 30) CGCTCTCCCAACTGAGCTAAATCCG 1 chrVIII:237832-238036 ( 30) CGCTCTCCCAACTGAGCTAAATCCG 1 chrVI:157925-158128 ( 6) CGCTCTCCCAACTGAGCTAAATCCG 1 chrVIII:466947-467058 ( 39) ACGCTCTACCACTAAGCTAAGGAGG 1 chrVII:1004135-1004324 ( 38) ACGCTCTACCACTAAGCTAAGGAGG 1 chrXVI:744175-744429 ( 33) ACGCTCTACCACTAAGCTAAGGAGG 1 chrVII:661628-661853 ( 60) ACGCTCTACCACTAAGCTAAGGAGG 1 chrXV:594337-594470 ( 47) AATTCTAACCACTGAACCACTTGCG 1 chrXIII:168738-168878 ( 38) CCTTAAACCAACTTGGCTACCGAGA 1 chrXV:288148-288300 ( 19) CCTTAAACCAACTTGGCTACCGAGA 1 chrX:354158-354358 ( 37) CCTTAAACCAACTTGGCTACCGAGA 1 chrVI:167333-167516 ( 64) CCTTAAACCAACTTGGCTACCGAGA 1 chrVI:210615-210820 ( 15) CCTTAAACCAACTTGGCTACCGAGA 1 chrXIII:837807-838034 ( 59) CCTTAAACCAACTTGGCTACCGAGA 1 chrX:542921-543163 ( 27) CCTTAAACCAACTTGGCTACCGAGA 1 chrX:374506-374651 ( 24) ACGCGTTGCCATTACGCCACGCGAG 1 chrII:405787-405941 ( 65) ACGCGTTGCCATTACGCCACGCGAG 1 chrXI:162406-162624 ( 68) ACGCGTTGCCATTACGCCACGCGAG 1 chrVII:828683-828906 ( 25) ACGCGTTGCCATTACGCCACGCGAG 1 chrVII:736234-736426 ( 61) ACGCGTTGCCATTACGCCACGCGAG 1 chrXIII:131785-132001 ( 28) ACGCGTTGCCATTACGCCACGCGAG 1 chrV:138546-138782 ( 53) ACGCGTTGCCATTACGCCACGCGAG 1 chrXV:110960-111087 ( 35) GATGATAACCACTACACTAACCGCC 1 chrIV:802694-802830 ( 65) AGTGATAACCACTACACTATAGGAC 1 chrVII:779514-779679 ( 71) GATGATAACCACTACACTAACCGCC 1 chrIV:520877-521041 ( 64) AGTGATAACCACTACACTATAGGAC 1 chrVIII:134207-134435 ( 51) AGTGATAACCACTACACTATAGGAC 1 chrXIV:96201-96401 ( 36) GATGATAACCACTACACTAACCGCC 1 chrIII:168291-168483 ( 10) AGTGATAACCACTACACTATAGGAC 1 chrV:431253-431471 ( 29) CACCTTTACCGCTAGCCCAAGAGGG 1 chrXII:448599-448812 ( 41) AGTGATAACCACTACACTATAGGAC 1 chrXIII:808205-808437 ( 21) AGTGATAACCACTACACTATAGGAC 1 chrX:538484-538659 ( 35) ACGCGTTACCATTACGCCAACGGAA 1 chrIV:488750-488962 ( 39) GTCTTGAACCACTGGACCATTGGAC 1 chrXVI:775772-775940 ( 5) CTGCGCTACCACTGCGCCATACGAG 1 chrXVI:435872-436066 ( 20) CTGCGCTACCACTGCGCCATACGAG 1 chrXI:513353-513479 ( 12) CATTCTGACCATTAAACTATCACGG 1 chrVII:544591-544708 ( 24) CATTCTGACCATTAAACTATCACGG 1 chrXIII:463471-463630 ( 55) CATTCTGACCATTAAACTATCACGG 1 chrVII:531529-531676 ( 59) CATTCTGACCATTAAACTATCACGG 1 chrXV:571847-572041 ( 65) CATTCTGACCATTAAACTATCACGG 1 chrIX:324301-324481 ( 8) CATTCTGACCATTAAACTATCACGG 1 chrXII:427016-427207 ( 72) CATTCTGACCATTAAACTATCACGG 1 chrXIV:631888-631989 ( 4) GAATCATACCTCTAGACCACACGCC 1 chrXII:818531-818710 ( 40) CATGCTAACCATTGCACTAGAGGAG 1 chrXII:459654-459887 ( 27) ATGGTCACCCACTACACTACTCGGT 1 chrXVI:56134-56339 ( 63) AAGCTCTACCATTGAGCCACCGCTT 1 chrVII:287307-287562 ( 46) AAGCTCTACCATTGAGCCACCGCTT 1 chrXIII:379308-379518 ( 20) AAGCTCTACCATTGAGCCACCGCTT 1 chrX:415936-416142 ( 22) AAGCTCTACCATTGAGCCACCGCTT 1 chrXI:302800-303037 ( 51) AAGCTCTACCATTGAGCCACCGCTT 1 chrVIII:475676-475865 ( 33) CGTGATAGCCGCTACACTATTGGAA 1 chrIV:1075420-1075657 ( 31) CGTGATAGCCGCTACACTATTGGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCYYWAMCMACTRVGCCAHVVRVS MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 25 n= 30695 bayes= 9.0203 E= 3.8e-494 -98 127 96 -1403 -103 87 129 -368 -143 164 -69 -92 -222 41 -11 70 -151 68 -132 72 8 -143 -501 97 94 -243 -77 -22 61 131 -185 -1403 -1403 237 -1403 -1403 -6 144 -37 -335 163 -1403 -202 -567 -1403 203 -1403 -55 -1403 -1403 -1403 171 35 -49 76 -109 -9 31 129 -1403 2 -501 182 -1403 -1403 237 -1403 -1403 -1403 185 -1403 -3 171 -1403 -1403 -1403 18 105 -501 -32 -25 48 71 -98 -6 11 79 -92 39 -56 107 -235 21 19 94 -251 -159 94 117 -177 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCYYWAMCMACTRVGCCAHVVRVS MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 25 nsites= 167 E= 3.8e-494 0.155689 0.467066 0.377246 0.000000 0.149701 0.353293 0.473054 0.023952 0.113772 0.604790 0.119760 0.161677 0.065868 0.257485 0.179641 0.497006 0.107784 0.311377 0.077844 0.502994 0.323353 0.071856 0.005988 0.598802 0.586826 0.035928 0.113772 0.263473 0.467066 0.479042 0.053892 0.000000 0.000000 1.000000 0.000000 0.000000 0.293413 0.526946 0.149701 0.029940 0.946108 0.000000 0.047904 0.005988 0.000000 0.790419 0.000000 0.209581 0.000000 0.000000 0.000000 1.000000 0.389222 0.137725 0.329341 0.143713 0.287425 0.239521 0.473054 0.000000 0.311377 0.005988 0.682635 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.700599 0.000000 0.299401 1.000000 0.000000 0.000000 0.000000 0.347305 0.401198 0.005988 0.245509 0.257485 0.269461 0.317365 0.155689 0.293413 0.209581 0.335329 0.161677 0.401198 0.131737 0.407186 0.059880 0.353293 0.221557 0.371257 0.053892 0.101796 0.371257 0.437126 0.089820 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCYYWAMCMACTRVGCCAHVVRVS MEME-1 regular expression -------------------------------------------------------------------------------- [CG][GC]C[TC][TC][TA][AT][CA]C[CA]A[CT]T[AG][GAC][GA]C[CT]A[CAT][GCA][GAC][GA][GAC][GC] -------------------------------------------------------------------------------- Time 154.65 secs. ******************************************************************************** ******************************************************************************** MOTIF AARATGTAYGGRTGTWWA MEME-2 width = 18 sites = 115 llr = 1383 E-value = 7.6e-187 ******************************************************************************** -------------------------------------------------------------------------------- Motif AARATGTAYGGRTGTWWA MEME-2 Description -------------------------------------------------------------------------------- Simplified A 6557:::8:1:5::1656 pos.-specific C 11::::2:5::::12:11 probability G 12321a:1:9a5191122 matrix T 22219:814:::917332 bits 2.4 * * 2.1 * * 1.9 * * 1.7 * ** * Relative 1.4 * ** ** Entropy 1.2 ** ** ** (17.3 bits) 0.9 ********** 0.7 *********** 0.5 ************** 0.2 **************** * 0.0 ------------------ Multilevel AAAATGTACGGGTGTAAA consensus TTGG T A TTT sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AARATGTAYGGRTGTWWA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------ chrX:157510-157715 + 41 6.72e-10 ATGGATGTAT AAAGTGTACGGGTGTAAA CACATTGTCG chrXIII:224078-224354 + 22 2.04e-09 AAATTTCAAA AAAATGTATGGATGTAAA ATTCAGTAGT chrXIII:225423-225665 - 48 7.56e-09 AATAAAAAAT AGAATGTACGGATGTAAT GCACGGATGT chrII:415548-415800 + 57 7.56e-09 TCTGGATGAC AAAATGCATGGGTGTAAA AAAGGAAATG chrV:396263-396506 - 42 9.34e-09 TGGGTTCACA AAAGTGTACGGATGTATA CAACAGGGAA chrIV:341341-341561 + 40 1.18e-08 ACTGGGTGTT AAAATGTACGGATGGAAA AGTAGACTCG chrII:89694-89903 + 51 1.87e-08 GGTGTTAAAG AGGGTGTATGGATGTAAA GTCACAAAAG chrXV:79825-80061 + 53 1.87e-08 TCACTTATTT AATATGTACGGGTGTTTA CATGGAGTTG chrVI:65055-65268 + 54 2.29e-08 GTTATCTCTG AATATGTACGGGTGTTGA CATGGAGAAA chrVI:221822-222000 + 57 3.27e-08 TTGGGTGTTA AAAATGTACGGGTGAAAA AAGTCTTATT chrXII:241704-241940 - 32 3.27e-08 GTTTACATTT TATATGTACGGATGTAAA AAGGGAAATA chrII:605804-606034 - 44 3.27e-08 GGTGATGGTG AAGATGTACAGGTGTAAA ACTGTCAGAC chrII:592960-593208 + 49 4.62e-08 ATGGAGTTCA AAGATGTATGGATGCAAG AAAAGAGGTT chrXV:678961-679101 + 27 5.53e-08 ATGGGTCCAC AATATGTACGGATGTATG GTCCCAAAAG chrVII:555416-555636 - 31 5.53e-08 CCAAACACTT TTAATGCACGGGTGTAAA AGGGATGTAC chrXIV:63194-63399 + 70 6.60e-08 GTGGGTTGCT AAAATGTTCGGATGTAAA GTAGTATTGA chrIX:68285-68443 - 33 7.81e-08 ATACATCTTA GTAATGTACGGATGTAAT AAACTCAAAT chrXII:932256-932412 + 14 7.81e-08 ATACTATGTA ATAATGCACGGATGTAGA GAAACAGAAA chrII:45070-45281 - 42 7.81e-08 AAACATACAT AGAATGTACGGATGCATG ATTGTCTCAG chrVII:438647-438830 + 68 1.05e-07 GTAAAGTTCC AAAATGTATGGATGGTAA GGTCTTTTTC chrIV:1359478-1359732 - 38 1.21e-07 GCATGGGTGC GTAATGTACGGATGTTTA ATGTCTTTTT chrVIII:382992-383256 + 25 1.21e-07 ATTTATTTTC ATGATGTATGGGTGTATC GGATGTTCGG chrXIII:145972-146221 - 35 1.40e-07 TGTATGGTGT ATGGTGTATGGATGTACA AAAATGCTGT chrVIII:505879-506111 + 54 1.40e-07 ATGTCTGGGT GAAATGTATGGATGCATA ATTGTCTCGA chrXV:1028783-1029027 + 50 1.40e-07 GTAAACAAAT CAAATGTACGGATGCACA ATGGTAAACA chrXVI:794485-794761 - 79 1.62e-07 TATA AATATGTATGGGTGTTTG GAGATGTTCG chrXII:262814-263090 - 60 1.62e-07 CAAATTAACA TAAATGTATGGATGTATT ATTAAATGTA chrXI:431456-431579 - 24 1.62e-07 AGATGTAAAA ATAGTGTATGGGTGTATT TGCGCTGTCA chrXVI:406290-406482 - 32 1.62e-07 TTTGGAGGTG GAAAGGTACGGATGTTAA ACTTCATAAA chrV:423160-423399 - 40 1.62e-07 TTGGGTGTAG AAGGTGTACGGAGGTAAA TATGCAGCAG chrXII:922205-922460 - 60 1.62e-07 CGAGAATTGG AATATGTACGGGTGTCAA TTTCAAACGT chrXI:108832-109001 - 52 1.87e-07 TGGAGCCAAC TAAATGTACGGATGTTGT AATGTGTTTG chrXVI:76440-76614 + 64 1.87e-07 AACACATTCG TGGATGTACGGGTGAAAA TACAGTCAAA chrVII:534874-535143 + 44 1.87e-07 ATGGGTTACA CAAATGCACGGATGCAAA TATAAAATAT chrXII:781527-781782 + 50 2.47e-07 TGGGTTTATG AAAATGCACGGATGCATT TTTTCTAGAT chrXIV:444566-444659 + 53 2.81e-07 TACGGATTTA AAGAGGTACGGATGGAGA CCGTAGAAAA chrIV:222045-222248 + 37 2.81e-07 AAATGAGATA AGGGTGTACGGGTGTGGT AACCGTCGTG chrXVI:378737-378886 + 77 3.18e-07 AATGAGAACT CGAATGTACGGATGTTTT CTCTGA chrIV:130661-130884 + 25 3.18e-07 AGAAAGCTAT AAAATGTGCGGATGTTTG TATATGTCAA chrVIII:75035-75291 - 37 3.18e-07 ACGGATGTAG AAAATGTACAGGTGTGAA CTTGCAGGTA chrV:305858-306127 - 40 3.18e-07 TGTGGGTTTG TAAATGTGTGGGTGTACA GTCCCGATAT chrX:607876-608152 - 29 3.59e-07 TGGGTTAAAA AGGATGTATGGATGGAGG GTTGGCATAA chrIV:1450931-1451207 + 62 3.59e-07 TTAAAATACA AATATGTACAGGTGTTAA TGTCTAAATA chrXII:498597-498748 - 48 3.59e-07 AATTCCTTAC AGGATGCACGGAGGTAAA CAGGAAAGAT chrXII:796495-796765 + 52 3.59e-07 GTTATTATCC AGGAGGCACGGATGCAAA AGATAGAAGA chrXII:282566-282842 - 17 4.07e-07 AAAAATAAAA AAAATGTACGGAGGGAAA AGATGTACAG chrIII:178409-178513 + 59 4.07e-07 AAAGAGTAGT AAAATGTACAGATGTTTA TTAAGTCCGT chrVII:366184-366355 + 16 4.61e-07 CGGATTTATA AATATGTGTGGGTGTTTA TATGATCAGT chrVII:254232-254477 + 41 4.61e-07 TACATCTTTC AATATGCACGGGTGCAAC CTCAAATATT chrVIII:125987-126242 - 35 4.61e-07 TGTAAAGATG TAGGTGTACGGATGCATT AACGTCTTTC chrXII:522161-522437 - 26 5.22e-07 TTAGTTAATA ATAATGTACAGATGTTAA TATGGTTTTT chrVII:726488-726682 - 49 5.22e-07 ATGGGTGTAT ATAGGGTATGGGTGTACA GTTAATTTCA chrXIII:296859-297043 - 62 5.89e-07 AAAAAAGTTC TAGATGTATGGGTGTGCG GGTAATGCTA chrXVI:281606-281882 - 69 6.61e-07 GTAATCAAAG GAAGTGTAAGGGTGTAAA GAGGTAAGGA chrXII:48867-49010 + 13 6.61e-07 AAGGGTGTCT AAGATGTACGGATCTTCA TTGGGATGGA chrII:60937-61177 + 64 6.61e-07 AAAGCAATTG AGGGTGTACAGATGTTAA AGTAGTCTGA chrXVI:731995-732250 - 29 7.39e-07 CCAACCATCC TAAAGGTATGGGTGTACT GACGATGCGA chrXIII:551441-551737 - 77 7.39e-07 GATTTT ATAATGTATGGGTGCCAA TATGTACTGA chrIV:358184-358302 + 54 8.25e-07 TCCTTGTCAG ATAATGTATGGGTGGTGT GTACACCAAG chrXV:93004-93219 + 49 8.25e-07 ACGAACGTCA CATGTGTACGGATGTAGT TGTGTCACGG chrVII:788411-788654 + 45 9.21e-07 TTGGGTTTAG AGTATGCACGGATGTTGT AAGGAATATT chrV:140561-140810 + 38 9.21e-07 TCGGCATTGT AAAAGGTATGGGTGCTTT GTGCGTCCAC chrXII:713235-713494 + 56 9.21e-07 TTTTTTTATA CATATGTACGGATGTGAT AGTCTGCAAC chrII:181363-181639 - 41 1.03e-06 TGTATTCAAT GTAATGTATGGGTGCTTT GTAAAGGGTG chrII:604211-604378 - 54 1.03e-06 GCGAATATGA AAAATGTACAGATGTGTA AATGTACGGA chrXIV:330819-331095 - 40 1.15e-06 GGTTTTACTT TAGATGTAAGGATGTAAG ATCTCTGAAT chrIV:229513-229789 - 26 1.28e-06 TTTTGTGTAA GATATGTATGGGTTTAAA GGAATATCTG chrXI:618875-619116 + 64 1.28e-06 ACAAATCTAT TAGAGGCACGGATGGAAA TAGTATTTAA chrI:82040-82156 + 60 1.42e-06 TCATCTAGCG GAGGTGCACGGATGTACC AACAGTTTTA chrX:703332-703565 + 22 1.42e-06 GCAAAATTAC AGAATGTACGGCTGTTTA AAAATAAATA chrIX:254340-254442 + 15 1.58e-06 CGCGGCAATT AGAATGTGTGGGTGCGGA AGCTCGCCGC chrVIII:149027-149164 + 35 1.58e-06 TTATAATTCA ATGGTGCATGGGTGAAAA TGTATGGGCT chrXIII:754499-754679 + 31 1.58e-06 AACGCTATTC TGGATGTATGGGGGTATT TTATGTTTGG chrIV:1401299-1401546 - 58 1.58e-06 AAAAGGGTAA TATATGTGTGGGTGGAAA ATGATTGGGT chrXV:94571-94679 - 57 1.74e-06 ACCGAAGACA ATATTGCATGGGTGTTAA TTCTATTTTT chrXV:168065-168332 + 38 1.74e-06 TAAACTTAAA TATAGGCACGGGTGTTTA AAGCCGCCCA chrII:477107-477380 - 19 1.74e-06 GGGTGCAACA TGAATGTACGGAGGTAGT TTGCTGATTG chrXIII:732101-732326 - 40 1.92e-06 CCACACATGC GCGATGTGCGGATGTATT ATGTCTTGAT chrIV:1301015-1301252 - 23 1.92e-06 CCAAACATCC ACAGTGCACGGATGTTTG AAGGAAAATT chrV:53608-53844 + 57 2.12e-06 CCACACATAT TTGGTGTTCGGATGTTAA ACAGGGTATT chrX:90142-90378 - 34 2.58e-06 TGTATGGGTG AGAATGTTCAGGTGCAAA TTGAAAAGGA chrVII:149188-149445 + 38 2.58e-06 AAAAGAAATC AGTATGTATGGGTGGGTG TATGGATGCT chrXVI:302700-302976 - 38 2.84e-06 TGGGTGTTTT AGGATGTCTGGATGTACA AGTTAGCTGT chrX:75440-75636 + 28 3.12e-06 TTTTCAAATA GTGAGGTGTGGATGTATA GAGAAATTAC chrXV:866633-866871 - 33 3.12e-06 ATACAAACCC AGAATGCTTGGATGTAGG GAAAAAATTG chrXIV:495284-495475 + 64 3.42e-06 TTGGGTGTGT ATAATGTACGGATTGAAT ATGTCAAGGA chrXII:1028316-1028487 + 60 3.74e-06 CCCATGCACC AAAATGTATGGGTCATAA TTTTTTTTCT chrIX:316222-316529 - 24 3.74e-06 GGTTTGTAAA ATAATGTATGGGTTCTAG TCTGAAAACT chrVII:649028-649277 + 45 4.09e-06 GTATGGGTTC TCGTTGTACGGATGTTTA AAATGTCCTG chrV:362187-362463 - 72 4.88e-06 ATATTGAAAT ATATTGTATGGGTTTAAA TTTCTTGGAT chrXV:1025771-1026047 - 14 5.33e-06 CCAATTACAC GTGATGAATGGGTGTTCA GCATATGTTA chrX:73463-73703 - 46 5.33e-06 TCTTTTCAGT GTGGTGCAAGGATGTAAA ATGATGTGTT chrIV:308083-308317 - 71 5.81e-06 ATTGCCTGCA TATATGTAAGGATGTAAC AGGAAATGTA chrXII:673925-674152 - 63 5.81e-06 GGATCAATAT CTGGTGCATGGGTCTAAA AAAATTAAGC chrII:332401-332666 - 39 5.81e-06 TTTGGGTTTA GAATTGTATGGGTGCAGC AAGGAAATAT chrXII:897777-897983 - 28 7.43e-06 ATGGGTTTTT TGGAGGTACAGGTGTTGT AGAATTCTGT chrXI:158305-158515 - 37 7.43e-06 ATTTATTTCC AGTGTGCACGGGTTGAAA TAAATGAATA chrIV:579154-579283 - 55 8.05e-06 AATTTTTTTA AAAATGTTTGGGTCTACT TTATGGTTTA chrXV:505178-505423 - 66 8.05e-06 AATACCATAT CATATGTTTGGGTGTGAT AAGGTTCATT chrIV:117241-117503 - 45 8.05e-06 TATGGGTGTA GATATGTATGGGTCTGAG ATTAATACAG chrX:651344-651540 - 51 8.72e-06 ACTTGAGACA AATATGTATGGGTTAAGA ATAATTATGG chrVI:95591-95754 + 12 9.44e-06 TATACGCAAT CCGGTGTGTGGGTGCATG ACTGATTGGT chrVII:277101-277331 - 58 9.44e-06 TCCCATAGAG CGGGTGTATGGGTCTAGC TAAAATACAC chrXVI:188707-188839 - 64 1.02e-05 ACCATAGTAA CCGATGCATGGGTTTTAA AAGTCACGTG chrVII:310572-310814 - 40 1.02e-05 GTGTGGGTCC CTGGTGTACAGATGTTAC ATTGGTTACA chrXV:779789-779998 + 20 1.10e-05 ATGTATGGGC TGATTGTATGGGTTTATA CAGGCCGTCA chrIII:163548-163785 + 59 1.10e-05 TTTAACGATC ATATGGTATGGGTGCACG TGGGATTCTA chrIX:99728-99948 + 20 1.19e-05 GTTTCATGAA TAAATGTACTGGTGTTAC ATGGTGTACC chrIV:490988-491264 - 52 1.60e-05 TGTTTTTTCC TGAATGATTGGGTGTAAT AAAATAGGTC chrXV:216338-216585 - 45 1.60e-05 CCTGGGTTGA GGAAGGCGCGGGTGCTCG GATGTTCCGA chrIV:411354-411526 - 42 2.26e-05 CTTTGGGTGC CCGGGGTGTGGGTGTTTG ATTTGTTTCT chrXIV:241457-241660 - 52 3.78e-05 ACGTGTATTG ATGGTGTTTAGGTGCTGG ATGTTGGGTG chrXVI:700025-700277 - 65 4.01e-05 TTTTGAAGCT ATGGTGTGTGGGGGATCA CTTGTGGGGG chrIX:257433-257612 - 58 4.52e-05 TCACAACTTT GCGGTGTACAGATGTCGT CACATACCGT chrXV:282042-282176 + 72 6.35e-05 ATCGCTTAAA TAGAGGAGTGGATGCTCA GGATAACATG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AARATGTAYGGRTGTWWA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:157510-157715 6.7e-10 40_[+2]_42 chrXIII:224078-224354 2e-09 21_[+2]_61 chrXIII:225423-225665 7.6e-09 47_[-2]_35 chrII:415548-415800 7.6e-09 56_[+2]_26 chrV:396263-396506 9.3e-09 41_[-2]_41 chrIV:341341-341561 1.2e-08 39_[+2]_43 chrII:89694-89903 1.9e-08 50_[+2]_32 chrXV:79825-80061 1.9e-08 52_[+2]_30 chrVI:65055-65268 2.3e-08 53_[+2]_29 chrVI:221822-222000 3.3e-08 56_[+2]_26 chrXII:241704-241940 3.3e-08 31_[-2]_51 chrII:605804-606034 3.3e-08 43_[-2]_39 chrII:592960-593208 4.6e-08 48_[+2]_34 chrXV:678961-679101 5.5e-08 26_[+2]_56 chrVII:555416-555636 5.5e-08 30_[-2]_52 chrXIV:63194-63399 6.6e-08 69_[+2]_13 chrIX:68285-68443 7.8e-08 32_[-2]_50 chrXII:932256-932412 7.8e-08 13_[+2]_69 chrII:45070-45281 7.8e-08 41_[-2]_41 chrVII:438647-438830 1.1e-07 67_[+2]_15 chrIV:1359478-1359732 1.2e-07 37_[-2]_45 chrVIII:382992-383256 1.2e-07 24_[+2]_58 chrXIII:145972-146221 1.4e-07 34_[-2]_48 chrVIII:505879-506111 1.4e-07 53_[+2]_29 chrXV:1028783-1029027 1.4e-07 49_[+2]_33 chrXVI:794485-794761 1.6e-07 78_[-2]_4 chrXII:262814-263090 1.6e-07 59_[-2]_23 chrXI:431456-431579 1.6e-07 23_[-2]_59 chrXVI:406290-406482 1.6e-07 31_[-2]_51 chrV:423160-423399 1.6e-07 39_[-2]_43 chrXII:922205-922460 1.6e-07 59_[-2]_23 chrXI:108832-109001 1.9e-07 51_[-2]_31 chrXVI:76440-76614 1.9e-07 63_[+2]_19 chrVII:534874-535143 1.9e-07 43_[+2]_39 chrXII:781527-781782 2.5e-07 49_[+2]_33 chrXIV:444566-444659 2.8e-07 52_[+2]_23 chrIV:222045-222248 2.8e-07 36_[+2]_46 chrXVI:378737-378886 3.2e-07 76_[+2]_6 chrIV:130661-130884 3.2e-07 24_[+2]_58 chrVIII:75035-75291 3.2e-07 36_[-2]_46 chrV:305858-306127 3.2e-07 39_[-2]_43 chrX:607876-608152 3.6e-07 28_[-2]_54 chrIV:1450931-1451207 3.6e-07 61_[+2]_21 chrXII:498597-498748 3.6e-07 47_[-2]_35 chrXII:796495-796765 3.6e-07 51_[+2]_31 chrXII:282566-282842 4.1e-07 16_[-2]_66 chrIII:178409-178513 4.1e-07 58_[+2]_24 chrVII:366184-366355 4.6e-07 15_[+2]_67 chrVII:254232-254477 4.6e-07 40_[+2]_42 chrVIII:125987-126242 4.6e-07 34_[-2]_48 chrXII:522161-522437 5.2e-07 25_[-2]_57 chrVII:726488-726682 5.2e-07 48_[-2]_34 chrXIII:296859-297043 5.9e-07 61_[-2]_21 chrXVI:281606-281882 6.6e-07 68_[-2]_14 chrXII:48867-49010 6.6e-07 12_[+2]_70 chrII:60937-61177 6.6e-07 63_[+2]_19 chrXVI:731995-732250 7.4e-07 28_[-2]_54 chrXIII:551441-551737 7.4e-07 76_[-2]_6 chrIV:358184-358302 8.3e-07 53_[+2]_29 chrXV:93004-93219 8.3e-07 48_[+2]_34 chrVII:788411-788654 9.2e-07 44_[+2]_38 chrV:140561-140810 9.2e-07 37_[+2]_45 chrXII:713235-713494 9.2e-07 55_[+2]_27 chrII:181363-181639 1e-06 40_[-2]_42 chrII:604211-604378 1e-06 53_[-2]_29 chrXIV:330819-331095 1.1e-06 39_[-2]_43 chrIV:229513-229789 1.3e-06 25_[-2]_57 chrXI:618875-619116 1.3e-06 63_[+2]_19 chrI:82040-82156 1.4e-06 59_[+2]_23 chrX:703332-703565 1.4e-06 21_[+2]_61 chrIX:254340-254442 1.6e-06 14_[+2]_68 chrVIII:149027-149164 1.6e-06 34_[+2]_48 chrXIII:754499-754679 1.6e-06 30_[+2]_52 chrIV:1401299-1401546 1.6e-06 57_[-2]_25 chrXV:94571-94679 1.7e-06 56_[-2]_26 chrXV:168065-168332 1.7e-06 37_[+2]_45 chrII:477107-477380 1.7e-06 18_[-2]_64 chrXIII:732101-732326 1.9e-06 39_[-2]_43 chrIV:1301015-1301252 1.9e-06 22_[-2]_60 chrV:53608-53844 2.1e-06 56_[+2]_26 chrX:90142-90378 2.6e-06 33_[-2]_49 chrVII:149188-149445 2.6e-06 37_[+2]_45 chrXVI:302700-302976 2.8e-06 37_[-2]_45 chrX:75440-75636 3.1e-06 27_[+2]_55 chrXV:866633-866871 3.1e-06 32_[-2]_50 chrXIV:495284-495475 3.4e-06 63_[+2]_19 chrXII:1028316-1028487 3.7e-06 59_[+2]_23 chrIX:316222-316529 3.7e-06 23_[-2]_59 chrVII:649028-649277 4.1e-06 44_[+2]_38 chrV:362187-362463 4.9e-06 71_[-2]_11 chrXV:1025771-1026047 5.3e-06 13_[-2]_69 chrX:73463-73703 5.3e-06 45_[-2]_37 chrIV:308083-308317 5.8e-06 70_[-2]_12 chrXII:673925-674152 5.8e-06 62_[-2]_20 chrII:332401-332666 5.8e-06 38_[-2]_44 chrXII:897777-897983 7.4e-06 27_[-2]_55 chrXI:158305-158515 7.4e-06 36_[-2]_46 chrIV:579154-579283 8.1e-06 54_[-2]_28 chrXV:505178-505423 8.1e-06 65_[-2]_17 chrIV:117241-117503 8.1e-06 44_[-2]_38 chrX:651344-651540 8.7e-06 50_[-2]_32 chrVI:95591-95754 9.4e-06 11_[+2]_71 chrVII:277101-277331 9.4e-06 57_[-2]_25 chrXVI:188707-188839 1e-05 63_[-2]_19 chrVII:310572-310814 1e-05 39_[-2]_43 chrXV:779789-779998 1.1e-05 19_[+2]_63 chrIII:163548-163785 1.1e-05 58_[+2]_24 chrIX:99728-99948 1.2e-05 19_[+2]_63 chrIV:490988-491264 1.6e-05 51_[-2]_31 chrXV:216338-216585 1.6e-05 44_[-2]_38 chrIV:411354-411526 2.3e-05 41_[-2]_41 chrXIV:241457-241660 3.8e-05 51_[-2]_31 chrXVI:700025-700277 4e-05 64_[-2]_18 chrIX:257433-257612 4.5e-05 57_[-2]_25 chrXV:282042-282176 6.3e-05 71_[+2]_11 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AARATGTAYGGRTGTWWA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AARATGTAYGGRTGTWWA width=18 seqs=115 chrX:157510-157715 ( 41) AAAGTGTACGGGTGTAAA 1 chrXIII:224078-224354 ( 22) AAAATGTATGGATGTAAA 1 chrXIII:225423-225665 ( 48) AGAATGTACGGATGTAAT 1 chrII:415548-415800 ( 57) AAAATGCATGGGTGTAAA 1 chrV:396263-396506 ( 42) AAAGTGTACGGATGTATA 1 chrIV:341341-341561 ( 40) AAAATGTACGGATGGAAA 1 chrII:89694-89903 ( 51) AGGGTGTATGGATGTAAA 1 chrXV:79825-80061 ( 53) AATATGTACGGGTGTTTA 1 chrVI:65055-65268 ( 54) AATATGTACGGGTGTTGA 1 chrVI:221822-222000 ( 57) AAAATGTACGGGTGAAAA 1 chrXII:241704-241940 ( 32) TATATGTACGGATGTAAA 1 chrII:605804-606034 ( 44) AAGATGTACAGGTGTAAA 1 chrII:592960-593208 ( 49) AAGATGTATGGATGCAAG 1 chrXV:678961-679101 ( 27) AATATGTACGGATGTATG 1 chrVII:555416-555636 ( 31) TTAATGCACGGGTGTAAA 1 chrXIV:63194-63399 ( 70) AAAATGTTCGGATGTAAA 1 chrIX:68285-68443 ( 33) GTAATGTACGGATGTAAT 1 chrXII:932256-932412 ( 14) ATAATGCACGGATGTAGA 1 chrII:45070-45281 ( 42) AGAATGTACGGATGCATG 1 chrVII:438647-438830 ( 68) AAAATGTATGGATGGTAA 1 chrIV:1359478-1359732 ( 38) GTAATGTACGGATGTTTA 1 chrVIII:382992-383256 ( 25) ATGATGTATGGGTGTATC 1 chrXIII:145972-146221 ( 35) ATGGTGTATGGATGTACA 1 chrVIII:505879-506111 ( 54) GAAATGTATGGATGCATA 1 chrXV:1028783-1029027 ( 50) CAAATGTACGGATGCACA 1 chrXVI:794485-794761 ( 79) AATATGTATGGGTGTTTG 1 chrXII:262814-263090 ( 60) TAAATGTATGGATGTATT 1 chrXI:431456-431579 ( 24) ATAGTGTATGGGTGTATT 1 chrXVI:406290-406482 ( 32) GAAAGGTACGGATGTTAA 1 chrV:423160-423399 ( 40) AAGGTGTACGGAGGTAAA 1 chrXII:922205-922460 ( 60) AATATGTACGGGTGTCAA 1 chrXI:108832-109001 ( 52) TAAATGTACGGATGTTGT 1 chrXVI:76440-76614 ( 64) TGGATGTACGGGTGAAAA 1 chrVII:534874-535143 ( 44) CAAATGCACGGATGCAAA 1 chrXII:781527-781782 ( 50) AAAATGCACGGATGCATT 1 chrXIV:444566-444659 ( 53) AAGAGGTACGGATGGAGA 1 chrIV:222045-222248 ( 37) AGGGTGTACGGGTGTGGT 1 chrXVI:378737-378886 ( 77) CGAATGTACGGATGTTTT 1 chrIV:130661-130884 ( 25) AAAATGTGCGGATGTTTG 1 chrVIII:75035-75291 ( 37) AAAATGTACAGGTGTGAA 1 chrV:305858-306127 ( 40) TAAATGTGTGGGTGTACA 1 chrX:607876-608152 ( 29) AGGATGTATGGATGGAGG 1 chrIV:1450931-1451207 ( 62) AATATGTACAGGTGTTAA 1 chrXII:498597-498748 ( 48) AGGATGCACGGAGGTAAA 1 chrXII:796495-796765 ( 52) AGGAGGCACGGATGCAAA 1 chrXII:282566-282842 ( 17) AAAATGTACGGAGGGAAA 1 chrIII:178409-178513 ( 59) AAAATGTACAGATGTTTA 1 chrVII:366184-366355 ( 16) AATATGTGTGGGTGTTTA 1 chrVII:254232-254477 ( 41) AATATGCACGGGTGCAAC 1 chrVIII:125987-126242 ( 35) TAGGTGTACGGATGCATT 1 chrXII:522161-522437 ( 26) ATAATGTACAGATGTTAA 1 chrVII:726488-726682 ( 49) ATAGGGTATGGGTGTACA 1 chrXIII:296859-297043 ( 62) TAGATGTATGGGTGTGCG 1 chrXVI:281606-281882 ( 69) GAAGTGTAAGGGTGTAAA 1 chrXII:48867-49010 ( 13) AAGATGTACGGATCTTCA 1 chrII:60937-61177 ( 64) AGGGTGTACAGATGTTAA 1 chrXVI:731995-732250 ( 29) TAAAGGTATGGGTGTACT 1 chrXIII:551441-551737 ( 77) ATAATGTATGGGTGCCAA 1 chrIV:358184-358302 ( 54) ATAATGTATGGGTGGTGT 1 chrXV:93004-93219 ( 49) CATGTGTACGGATGTAGT 1 chrVII:788411-788654 ( 45) AGTATGCACGGATGTTGT 1 chrV:140561-140810 ( 38) AAAAGGTATGGGTGCTTT 1 chrXII:713235-713494 ( 56) CATATGTACGGATGTGAT 1 chrII:181363-181639 ( 41) GTAATGTATGGGTGCTTT 1 chrII:604211-604378 ( 54) AAAATGTACAGATGTGTA 1 chrXIV:330819-331095 ( 40) TAGATGTAAGGATGTAAG 1 chrIV:229513-229789 ( 26) GATATGTATGGGTTTAAA 1 chrXI:618875-619116 ( 64) TAGAGGCACGGATGGAAA 1 chrI:82040-82156 ( 60) GAGGTGCACGGATGTACC 1 chrX:703332-703565 ( 22) AGAATGTACGGCTGTTTA 1 chrIX:254340-254442 ( 15) AGAATGTGTGGGTGCGGA 1 chrVIII:149027-149164 ( 35) ATGGTGCATGGGTGAAAA 1 chrXIII:754499-754679 ( 31) TGGATGTATGGGGGTATT 1 chrIV:1401299-1401546 ( 58) TATATGTGTGGGTGGAAA 1 chrXV:94571-94679 ( 57) ATATTGCATGGGTGTTAA 1 chrXV:168065-168332 ( 38) TATAGGCACGGGTGTTTA 1 chrII:477107-477380 ( 19) TGAATGTACGGAGGTAGT 1 chrXIII:732101-732326 ( 40) GCGATGTGCGGATGTATT 1 chrIV:1301015-1301252 ( 23) ACAGTGCACGGATGTTTG 1 chrV:53608-53844 ( 57) TTGGTGTTCGGATGTTAA 1 chrX:90142-90378 ( 34) AGAATGTTCAGGTGCAAA 1 chrVII:149188-149445 ( 38) AGTATGTATGGGTGGGTG 1 chrXVI:302700-302976 ( 38) AGGATGTCTGGATGTACA 1 chrX:75440-75636 ( 28) GTGAGGTGTGGATGTATA 1 chrXV:866633-866871 ( 33) AGAATGCTTGGATGTAGG 1 chrXIV:495284-495475 ( 64) ATAATGTACGGATTGAAT 1 chrXII:1028316-1028487 ( 60) AAAATGTATGGGTCATAA 1 chrIX:316222-316529 ( 24) ATAATGTATGGGTTCTAG 1 chrVII:649028-649277 ( 45) TCGTTGTACGGATGTTTA 1 chrV:362187-362463 ( 72) ATATTGTATGGGTTTAAA 1 chrXV:1025771-1026047 ( 14) GTGATGAATGGGTGTTCA 1 chrX:73463-73703 ( 46) GTGGTGCAAGGATGTAAA 1 chrIV:308083-308317 ( 71) TATATGTAAGGATGTAAC 1 chrXII:673925-674152 ( 63) CTGGTGCATGGGTCTAAA 1 chrII:332401-332666 ( 39) GAATTGTATGGGTGCAGC 1 chrXII:897777-897983 ( 28) TGGAGGTACAGGTGTTGT 1 chrXI:158305-158515 ( 37) AGTGTGCACGGGTTGAAA 1 chrIV:579154-579283 ( 55) AAAATGTTTGGGTCTACT 1 chrXV:505178-505423 ( 66) CATATGTTTGGGTGTGAT 1 chrIV:117241-117503 ( 45) GATATGTATGGGTCTGAG 1 chrX:651344-651540 ( 51) AATATGTATGGGTTAAGA 1 chrVI:95591-95754 ( 12) CCGGTGTGTGGGTGCATG 1 chrVII:277101-277331 ( 58) CGGGTGTATGGGTCTAGC 1 chrXVI:188707-188839 ( 64) CCGATGCATGGGTTTTAA 1 chrVII:310572-310814 ( 40) CTGGTGTACAGATGTTAC 1 chrXV:779789-779998 ( 20) TGATTGTATGGGTTTATA 1 chrIII:163548-163785 ( 59) ATATGGTATGGGTGCACG 1 chrIX:99728-99948 ( 20) TAAATGTACTGGTGTTAC 1 chrIV:490988-491264 ( 52) TGAATGATTGGGTGTAAT 1 chrXV:216338-216585 ( 45) GGAAGGCGCGGGTGCTCG 1 chrIV:411354-411526 ( 42) CCGGGGTGTGGGTGTTTG 1 chrXIV:241457-241660 ( 52) ATGGTGTTTAGGTGCTGG 1 chrXVI:700025-700277 ( 65) ATGGTGTGTGGGGGATCA 1 chrIX:257433-257612 ( 58) GCGGTGTACAGATGTCGT 1 chrXV:282042-282176 ( 72) TAGAGGAGTGGATGCTCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AARATGTAYGGRTGTWWA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 18 n= 33530 bayes= 8.05737 E= 7.6e-187 86 -89 -48 -61 69 -167 17 -44 64 -1349 81 -75 124 -1349 22 -255 -1349 -1349 -67 152 -1349 -1349 237 -1349 -355 -9 -1349 137 142 -448 -89 -214 -314 143 -1349 53 -155 -1349 219 -513 -1349 -1349 237 -1349 67 -448 138 -1349 -1349 -1349 -189 163 -1349 -189 218 -214 -255 -9 -102 113 91 -289 -131 7 56 -57 -31 -23 86 -148 -31 -49 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AARATGTAYGGRTGTWWA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 18 nsites= 115 E= 7.6e-187 0.556522 0.104348 0.139130 0.200000 0.495652 0.060870 0.217391 0.226087 0.478261 0.000000 0.339130 0.182609 0.721739 0.000000 0.226087 0.052174 0.000000 0.000000 0.121739 0.878261 0.000000 0.000000 1.000000 0.000000 0.026087 0.182609 0.000000 0.791304 0.817391 0.008696 0.104348 0.069565 0.034783 0.521739 0.000000 0.443478 0.104348 0.000000 0.886957 0.008696 0.000000 0.000000 1.000000 0.000000 0.486957 0.008696 0.504348 0.000000 0.000000 0.000000 0.052174 0.947826 0.000000 0.052174 0.878261 0.069565 0.052174 0.182609 0.095652 0.669565 0.573913 0.026087 0.078261 0.321739 0.452174 0.130435 0.156522 0.260870 0.556522 0.069565 0.156522 0.217391 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AARATGTAYGGRTGTWWA MEME-2 regular expression -------------------------------------------------------------------------------- [AT][ATG][AG][AG]TGTA[CT]GG[GA]TGT[AT][AT][AT] -------------------------------------------------------------------------------- Time 285.33 secs. ******************************************************************************** ******************************************************************************** MOTIF CMSTTATARTSHRAMGRYYATCRGWTCRA MEME-3 width = 29 sites = 42 llr = 808 E-value = 1.2e-130 ******************************************************************************** -------------------------------------------------------------------------------- Motif CMSTTATARTSHRAMGRYYATCRGWTCRA MEME-3 Description -------------------------------------------------------------------------------- Simplified A :3:325:96::2576:31:6::6:3::57 pos.-specific C 655:2:2:1143::31:36227:3::a:3 probability G 324::2:1326:43187::21347:::5: matrix T 1:17528::7:41::::64:61::7a::: bits 2.4 * 2.1 * 1.9 * 1.7 * ** Relative 1.4 * * * * ** Entropy 1.2 * ** * ** * * * ** (27.7 bits) 0.9 * * ** * * ** * *** **** 0.7 * ** ***** ******* ******** 0.5 **** ***** ***************** 0.2 ***************************** 0.0 ----------------------------- Multilevel CCCTTATAATGTAAAGGTCATCAGTTCAA consensus GAGAAG G CCGGC ACTCCGGCA GC sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMSTTATARTSHRAMGRYYATCRGWTCRA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrXV:854051-854327 - 63 3.52e-12 AGCGCGCTT CCCTTGCAAGGAAGAGGTCATCGGTTCGA TTCCGGTTGC chrI:166185-166382 + 63 3.52e-12 TAGCGCGCTT CCCTTGCAAGGAAGAGGTCATCGGTTCGA TTCCGGTTG chrXIV:560653-560786 - 39 8.62e-12 TAAGGCGCCA CACTAGTAATGTGGAGATCATCGGTTCAA ATCCGATTGG chrII:266310-266476 + 64 8.62e-12 TAAGGCGCCA CACTAGTAATGTGGAGATCATCGGTTCAA ATCCGATT chrXIV:104727-104899 + 71 8.62e-12 TAAGGCGCCA CACTAGTAATGTGGAGATCATCGGTTCAA A chrV:487293-487455 - 49 3.60e-11 TGAATTTAAT CCGATATAGTGTAACGGCTATCACATCAC GCTTTCACCG chrXI:141003-141172 - 23 3.60e-11 CCTTTGTAAT CCGATATAGTGTAACGGCTATCACATCAC GCTTTCACCG chrII:645059-645246 + 66 3.60e-11 AAGTTATTAT CCGATATAGTGTAACGGCTATCACATCAC GCTTTC chrXIII:290708-290897 + 50 3.60e-11 GAAATATAAT CCGATATAGTGTAACGGCTATCACATCAC GCTTTCACCG chrV:354833-355010 + 64 3.60e-11 GTATTGTAAT CCGATATAGTGTAACGGCTATCACATCAC GCTTTCAC chrVII:328511-328718 + 20 3.60e-11 CAATTATTGT CCGATATAGTGTAACGGCTATCACATCAC GCTTTCACCG chrX:115930-116116 - 8 3.60e-11 CGTTTATAAT CCGATATAGTGTAACGGCTATCACATCAC GCTTTCA chrXVI:210187-210375 - 3 3.60e-11 CAATTATTGT CCGATATAGTGTAACGGCTATCACATCAC GC chrV:177001-177206 + 47 3.60e-11 CTACTTTGAT CCGATATAGTGTAACGGCTATCACATCAC GCTTTCACCG chrVII:541738-541965 + 50 3.60e-11 AGATTACCAT CCGATATAGTGTAACGGCTATCACATCAC GCTTTCACCG chrXII:797070-797270 + 59 3.60e-11 TAGTTGTCGT CCGATATAGTGTAACGGCTATCACATCAC GCTTTCACCG chrIX:197485-197676 + 63 5.53e-11 CTAATCAAAT CCGATGTAGTGTAACGGCTATCACATCAC GTTCTCACC chrIV:1017172-1017385 - 21 5.53e-11 AAGGTACAAT CCGATGTAGTGTAACGGCTATCACATCAC GTTCTCACCG chrVII:1004135-1004324 + 65 6.36e-11 TAGAGCGTTG CACTTGTAATGCAAAGGTCGTTAGTTCAA TTCTGAC chrXVI:744175-744429 + 60 6.36e-11 TAGAGCGTTG CACTTGTAATGCAAAGGTCGTTAGTTCAA TTCTGACAGG chrVIII:466947-467058 + 66 1.09e-10 TAGAGCGTTG CACTTGTAATGCAAAGGTCGCTAGTTCAA TTCTGG chrXI:162406-162624 - 37 7.73e-10 CAACGCGTCT GACTTCTAATCAGAAGATTATGGGTTCGA CCCCCATCGT chrX:538484-538659 + 62 9.46e-10 TAACGCGTCT CCCTCCTAAGGAGAAGACTGCGGGTTCGA GTCCCGTACG chrVIII:475676-475865 - 1 9.46e-10 TATCACGTTG CCTTCACACGGCAAAGGTCCCGAGTTCGA chrIV:488750-488962 - 6 1.15e-09 CAAGACGTCG CCTTTACACGGCGAAGATCCCGAGTTCGA ACCTC chrXV:976401-976493 + 49 2.62e-09 AAGAGCGTCA GTCTCATAATCTGAAGGTCGAGAGTTCGA ACCTCCCCTG chrX:422832-423062 + 69 2.62e-09 AAGAGCGTCA GTCTCATAATCTGAAGGTCGAGAGTTCGA ACC chrVI:226579-226855 - 36 2.85e-09 TAGCGCGTAT GACTCTTAATCATAAGGTTAGGGGTTCGA GCCCCCTACA chrVII:185715-185796 - 14 2.85e-09 TAGCGCGTAT GACTCTTAATCATAAGGTTAGGGGTTCGA GCCCCCTACA chrV:435736-435894 - 2 2.85e-09 TAGCGCGTAT GACTCTTAATCATAAGGTTAGGGGTTCGA G chrV:551295-551384 - 5 9.10e-09 TAAGGCACCG TGCTAATAACGCGGGGATCAGCGGTTCGA TCCC chrXII:1052084-1052182 - 2 9.10e-09 TAAGGCACCG TGCTAATAACGCGGGGATCAGCGGTTCGA T chrV:443187-443329 - 9 9.10e-09 TAAGGCACCG TGCTAATAACGCGGGGATCAGCGGTTCGA TCCCGCTA chrXV:663780-663952 - 11 1.04e-08 TATGGCATCT GCTTAACACGCAGAACGTCCCCAGTTCGA TCCTGGGCGA chrXIII:586589-586778 - 18 1.04e-08 TATGGCATCT GCTTAACACGCAGAACGTCCCCAGTTCGA TCCTGGGCGA chrXIII:372404-372585 - 16 1.04e-08 TATGGCATCT GCTTAACACGCAGAACGTCCCCAGTTCGA TCCTGGGCGA chrIV:645029-645305 - 51 1.65e-08 TTATCACTTT CGGTTTTGATCCGGACAACCCCGGTTCGA ATCCGGGTAG chrIV:802694-802830 - 34 1.65e-08 TTATCACTTT CGGTTTTGATCCGGACAACCCCGGTTCGA ATCCGGGTAG chrXII:448599-448812 - 10 1.65e-08 TTATCACTTT CGGTTTTGATCCGGACAACCCCGGTTCGA ATCCGGGTA chrX:517736-518012 - 4 2.65e-08 AAGCGCGCAG GGCTCATAACCCTGATGTCCTCGGATCGA AAC chrXII:975876-976152 - 34 2.97e-08 TAAGGCGTGC GACTGTTAATCGCAAGATCGTGAGTTCAA CCCTCACTGG chrVI:137437-137651 - 7 2.97e-08 TAAGGCGTGC GACTGTTAATCGCAAGATCGTGAGTTCAA CCCTCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMSTTATARTSHRAMGRYYATCRGWTCRA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXV:854051-854327 3.5e-12 62_[-3]_9 chrI:166185-166382 3.5e-12 62_[+3]_9 chrXIV:560653-560786 8.6e-12 38_[-3]_33 chrII:266310-266476 8.6e-12 63_[+3]_8 chrXIV:104727-104899 8.6e-12 70_[+3]_1 chrV:487293-487455 3.6e-11 48_[-3]_23 chrXI:141003-141172 3.6e-11 22_[-3]_49 chrII:645059-645246 3.6e-11 65_[+3]_6 chrXIII:290708-290897 3.6e-11 49_[+3]_22 chrV:354833-355010 3.6e-11 63_[+3]_8 chrVII:328511-328718 3.6e-11 19_[+3]_52 chrX:115930-116116 3.6e-11 7_[-3]_64 chrXVI:210187-210375 3.6e-11 2_[-3]_69 chrV:177001-177206 3.6e-11 46_[+3]_25 chrVII:541738-541965 3.6e-11 49_[+3]_22 chrXII:797070-797270 3.6e-11 58_[+3]_13 chrIX:197485-197676 5.5e-11 62_[+3]_9 chrIV:1017172-1017385 5.5e-11 20_[-3]_51 chrVII:1004135-1004324 6.4e-11 64_[+3]_7 chrXVI:744175-744429 6.4e-11 59_[+3]_12 chrVIII:466947-467058 1.1e-10 65_[+3]_6 chrXI:162406-162624 7.7e-10 36_[-3]_35 chrX:538484-538659 9.5e-10 61_[+3]_10 chrVIII:475676-475865 9.5e-10 [-3]_71 chrIV:488750-488962 1.2e-09 5_[-3]_66 chrXV:976401-976493 2.6e-09 48_[+3]_15 chrX:422832-423062 2.6e-09 68_[+3]_3 chrVI:226579-226855 2.9e-09 35_[-3]_36 chrVII:185715-185796 2.9e-09 13_[-3]_39 chrV:435736-435894 2.9e-09 1_[-3]_70 chrV:551295-551384 9.1e-09 4_[-3]_56 chrXII:1052084-1052182 9.1e-09 1_[-3]_68 chrV:443187-443329 9.1e-09 8_[-3]_63 chrXV:663780-663952 1e-08 10_[-3]_61 chrXIII:586589-586778 1e-08 17_[-3]_54 chrXIII:372404-372585 1e-08 15_[-3]_56 chrIV:645029-645305 1.7e-08 50_[-3]_21 chrIV:802694-802830 1.7e-08 33_[-3]_38 chrXII:448599-448812 1.7e-08 9_[-3]_62 chrX:517736-518012 2.7e-08 3_[-3]_68 chrXII:975876-976152 3e-08 33_[-3]_38 chrVI:137437-137651 3e-08 6_[-3]_65 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMSTTATARTSHRAMGRYYATCRGWTCRA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CMSTTATARTSHRAMGRYYATCRGWTCRA width=29 seqs=42 chrXV:854051-854327 ( 63) CCCTTGCAAGGAAGAGGTCATCGGTTCGA 1 chrI:166185-166382 ( 63) CCCTTGCAAGGAAGAGGTCATCGGTTCGA 1 chrXIV:560653-560786 ( 39) CACTAGTAATGTGGAGATCATCGGTTCAA 1 chrII:266310-266476 ( 64) CACTAGTAATGTGGAGATCATCGGTTCAA 1 chrXIV:104727-104899 ( 71) CACTAGTAATGTGGAGATCATCGGTTCAA 1 chrV:487293-487455 ( 49) CCGATATAGTGTAACGGCTATCACATCAC 1 chrXI:141003-141172 ( 23) CCGATATAGTGTAACGGCTATCACATCAC 1 chrII:645059-645246 ( 66) CCGATATAGTGTAACGGCTATCACATCAC 1 chrXIII:290708-290897 ( 50) CCGATATAGTGTAACGGCTATCACATCAC 1 chrV:354833-355010 ( 64) CCGATATAGTGTAACGGCTATCACATCAC 1 chrVII:328511-328718 ( 20) CCGATATAGTGTAACGGCTATCACATCAC 1 chrX:115930-116116 ( 8) CCGATATAGTGTAACGGCTATCACATCAC 1 chrXVI:210187-210375 ( 3) CCGATATAGTGTAACGGCTATCACATCAC 1 chrV:177001-177206 ( 47) CCGATATAGTGTAACGGCTATCACATCAC 1 chrVII:541738-541965 ( 50) CCGATATAGTGTAACGGCTATCACATCAC 1 chrXII:797070-797270 ( 59) CCGATATAGTGTAACGGCTATCACATCAC 1 chrIX:197485-197676 ( 63) CCGATGTAGTGTAACGGCTATCACATCAC 1 chrIV:1017172-1017385 ( 21) CCGATGTAGTGTAACGGCTATCACATCAC 1 chrVII:1004135-1004324 ( 65) CACTTGTAATGCAAAGGTCGTTAGTTCAA 1 chrXVI:744175-744429 ( 60) CACTTGTAATGCAAAGGTCGTTAGTTCAA 1 chrVIII:466947-467058 ( 66) CACTTGTAATGCAAAGGTCGCTAGTTCAA 1 chrXI:162406-162624 ( 37) GACTTCTAATCAGAAGATTATGGGTTCGA 1 chrX:538484-538659 ( 62) CCCTCCTAAGGAGAAGACTGCGGGTTCGA 1 chrVIII:475676-475865 ( 1) CCTTCACACGGCAAAGGTCCCGAGTTCGA 1 chrIV:488750-488962 ( 6) CCTTTACACGGCGAAGATCCCGAGTTCGA 1 chrXV:976401-976493 ( 49) GTCTCATAATCTGAAGGTCGAGAGTTCGA 1 chrX:422832-423062 ( 69) GTCTCATAATCTGAAGGTCGAGAGTTCGA 1 chrVI:226579-226855 ( 36) GACTCTTAATCATAAGGTTAGGGGTTCGA 1 chrVII:185715-185796 ( 14) GACTCTTAATCATAAGGTTAGGGGTTCGA 1 chrV:435736-435894 ( 2) GACTCTTAATCATAAGGTTAGGGGTTCGA 1 chrV:551295-551384 ( 5) TGCTAATAACGCGGGGATCAGCGGTTCGA 1 chrXII:1052084-1052182 ( 2) TGCTAATAACGCGGGGATCAGCGGTTCGA 1 chrV:443187-443329 ( 9) TGCTAATAACGCGGGGATCAGCGGTTCGA 1 chrXV:663780-663952 ( 11) GCTTAACACGCAGAACGTCCCCAGTTCGA 1 chrXIII:586589-586778 ( 18) GCTTAACACGCAGAACGTCCCCAGTTCGA 1 chrXIII:372404-372585 ( 16) GCTTAACACGCAGAACGTCCCCAGTTCGA 1 chrIV:645029-645305 ( 51) CGGTTTTGATCCGGACAACCCCGGTTCGA 1 chrIV:802694-802830 ( 34) CGGTTTTGATCCGGACAACCCCGGTTCGA 1 chrXII:448599-448812 ( 10) CGGTTTTGATCCGGACAACCCCGGTTCGA 1 chrX:517736-518012 ( 4) GGCTCATAACCCTGATGTCCTCGGATCGA 1 chrXII:975876-976152 ( 34) GACTGTTAATCGCAAGATCGTGAGTTCAA 1 chrVI:137437-137651 ( 7) GACTGTTAATCGCAAGATCGTGAGTTCAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMSTTATARTSHRAMGRYYATCRGWTCRA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 29075 bayes= 8.03017 E= 1.2e-130 -1204 173 56 -210 -10 137 -22 -268 -1204 137 97 -136 2 -1204 -1204 117 -51 -2 -202 84 77 -202 30 -68 -1204 -22 -1204 144 160 -1204 -144 -1204 90 -70 68 -1204 -1204 -102 -2 122 -1204 88 173 -1204 -36 56 -202 48 56 -202 106 -168 122 -1204 56 -1204 102 68 -144 -1204 -1204 -44 210 -368 12 -1204 178 -1204 -210 78 -1204 96 -1204 156 -1204 48 96 14 -2 -1204 -268 30 -44 90 -1204 178 43 -210 96 -1204 106 -1204 -1204 68 183 -1204 12 -1204 -1204 112 -1204 -1204 -1204 171 -1204 237 -1204 -1204 71 -1204 137 -1204 117 68 -1204 -1204 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMSTTATARTSHRAMGRYYATCRGWTCRA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 42 E= 1.2e-130 0.000000 0.642857 0.285714 0.071429 0.285714 0.500000 0.166667 0.047619 0.000000 0.500000 0.380952 0.119048 0.309524 0.000000 0.000000 0.690476 0.214286 0.190476 0.047619 0.547619 0.523810 0.047619 0.238095 0.190476 0.000000 0.166667 0.000000 0.833333 0.928571 0.000000 0.071429 0.000000 0.571429 0.119048 0.309524 0.000000 0.000000 0.095238 0.190476 0.714286 0.000000 0.357143 0.642857 0.000000 0.238095 0.285714 0.047619 0.428571 0.452381 0.047619 0.404762 0.095238 0.714286 0.000000 0.285714 0.000000 0.619048 0.309524 0.071429 0.000000 0.000000 0.142857 0.833333 0.023810 0.333333 0.000000 0.666667 0.000000 0.071429 0.333333 0.000000 0.595238 0.000000 0.571429 0.000000 0.428571 0.595238 0.214286 0.190476 0.000000 0.047619 0.238095 0.142857 0.571429 0.000000 0.666667 0.261905 0.071429 0.595238 0.000000 0.404762 0.000000 0.000000 0.309524 0.690476 0.000000 0.333333 0.000000 0.000000 0.666667 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.500000 0.000000 0.500000 0.000000 0.690476 0.309524 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMSTTATARTSHRAMGRYYATCRGWTCRA MEME-3 regular expression -------------------------------------------------------------------------------- [CG][CA][CG][TA][TA][AG]TA[AG]T[GC][TCA][AG][AG][AC]G[GA][TC][CT][AC][TC][CG][AG][GC][TA]TC[AG][AC] -------------------------------------------------------------------------------- Time 401.74 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIX:316222-316529 7.52e-03 23_[-2(3.74e-06)]_59 chrXII:460473-460668 6.95e-01 100 chrXII:796495-796765 9.14e-04 51_[+2(3.59e-07)]_31 chrII:477107-477380 1.25e-03 18_[-2(1.74e-06)]_1_[-2(1.58e-06)]_\ 45 chrXV:168065-168332 9.82e-03 37_[+2(1.74e-06)]_45 chrV:305858-306127 1.24e-03 39_[-2(3.18e-07)]_43 chrXII:459654-459887 1.44e-02 26_[-1(1.08e-05)]_49 chrII:332401-332666 2.59e-02 38_[-2(5.81e-06)]_44 chrXIII:551441-551737 4.38e-03 1_[+2(2.42e-05)]_57_[-2(7.39e-07)]_\ 6 chrXII:922205-922460 6.30e-04 33_[-2(4.01e-05)]_8_[-2(1.62e-07)]_\ 23 chrXII:713235-713494 4.67e-03 55_[+2(9.21e-07)]_27 chrVII:149188-149445 1.27e-02 37_[+2(2.58e-06)]_45 chrIV:117241-117503 1.73e-02 44_[-2(8.05e-06)]_38 chrXV:216338-216585 2.75e-02 44_[-2(1.60e-05)]_38 chrXII:781527-781782 1.39e-03 31_[+2(4.01e-05)]_[+2(2.47e-07)]_33 chrXV:1028783-1029027 7.94e-04 23_[+2(6.35e-05)]_8_[+2(1.40e-07)]_\ 33 chrVIII:382992-383256 1.22e-04 24_[+2(1.21e-07)]_58 chrIV:1359478-1359732 1.20e-03 37_[-2(1.21e-07)]_45 chrXVI:731995-732250 1.44e-04 28_[-2(7.39e-07)]_54 chrII:415548-415800 9.18e-05 56_[+2(7.56e-09)]_26 chrVIII:75035-75291 2.22e-03 36_[-2(3.18e-07)]_46 chrVII:534874-535143 4.61e-04 43_[+2(1.87e-07)]_39 chrII:592960-593208 2.32e-04 48_[+2(4.62e-08)]_34 chrXVI:700025-700277 8.22e-04 64_[-2(4.01e-05)]_18 chrIII:163548-163785 1.04e-02 28_[+2(2.42e-05)]_12_[+2(1.10e-05)]_\ 24 chrXI:618875-619116 1.68e-04 34_[-2(3.55e-05)]_11_[+2(1.28e-06)]_\ 19 chrXV:505178-505423 1.37e-02 40_[-2(8.05e-06)]_7_[-2(8.05e-06)]_\ 17 chrVIII:125987-126242 1.47e-03 34_[-2(4.61e-07)]_48 chrV:140561-140810 1.61e-03 37_[+2(9.21e-07)]_19_[+2(1.97e-05)]_\ 8 chrIV:1401299-1401546 1.93e-03 57_[-2(1.58e-06)]_25 chrX:73463-73703 9.91e-03 45_[-2(5.33e-06)]_37 chrVII:788411-788654 1.74e-03 44_[+2(9.21e-07)]_38 chrXV:866633-866871 9.61e-06 13_[-3(1.27e-06)]_9_[+2(8.05e-06)]_\ 31 chrXIII:225423-225665 2.07e-05 47_[-2(7.56e-09)]_35 chrXIV:63194-63399 1.61e-04 69_[+2(6.60e-08)]_13 chrIV:130661-130884 7.09e-04 24_[+2(3.18e-07)]_58 chrV:53608-53844 5.07e-03 39_[-2(1.92e-06)]_43 chrIV:1301015-1301252 1.46e-04 22_[-2(1.92e-06)]_60 chrVII:649028-649277 1.41e-02 44_[+2(4.09e-06)]_38 chrXV:79825-80061 1.64e-04 52_[+2(1.87e-08)]_30 chrVIII:505879-506111 5.67e-05 53_[+2(1.40e-07)]_29 chrV:396263-396506 4.21e-05 41_[-2(9.34e-09)]_[-2(8.72e-06)]_23 chrVII:310572-310814 3.63e-03 39_[-2(1.02e-05)]_43 chrIX:99728-99948 1.22e-02 19_[+2(1.19e-05)]_63 chrXII:673925-674152 1.48e-03 62_[-2(5.81e-06)]_20 chrVII:277101-277331 1.36e-02 57_[-2(9.44e-06)]_25 chrII:605804-606034 3.24e-06 43_[-2(3.27e-08)]_39 chrX:90142-90378 5.65e-03 33_[-2(2.58e-06)]_49 chrXII:241704-241940 3.82e-04 31_[-2(3.27e-08)]_3_[-2(4.47e-06)]_\ 30 chrXI:302800-303037 1.72e-02 50_[-1(1.37e-05)]_25 chrXIV:495284-495475 1.22e-02 63_[+2(3.42e-06)]_19 chrIV:1175714-1175953 5.75e-05 46_[-1(5.64e-08)]_29 chrX:542921-543163 5.96e-04 26_[+1(3.86e-07)]_49 chrX:422832-423062 6.07e-10 40_[-1(5.64e-08)]_3_[+3(2.62e-09)]_\ 3 chrII:89694-89903 7.00e-06 30_[+2(5.22e-07)]_2_[+2(1.87e-08)]_\ 32 chrV:423160-423399 4.77e-04 39_[-2(1.62e-07)]_43 chrIV:341341-341561 1.11e-04 39_[+2(1.18e-08)]_43 chrXVI:769191-769409 1.99e-06 26_[+1(7.37e-10)]_49 chrVI:65055-65268 1.43e-04 53_[+2(2.29e-08)]_29 chrVII:661628-661853 7.17e-04 59_[-1(2.89e-07)]_16 chrXVI:744175-744429 7.90e-12 32_[-1(2.89e-07)]_2_[+3(6.36e-11)]_\ 12 chrVII:254232-254477 1.60e-03 20_[-2(4.07e-07)]_2_[+2(4.61e-07)]_\ 42 chrIII:227823-228041 1.46e-05 60_[-1(2.13e-09)]_15 chrXV:93004-93219 1.07e-03 22_[+2(4.47e-06)]_8_[+2(8.25e-07)]_\ 34 chrX:391017-391244 3.03e-04 9_[+1(5.64e-08)]_66 chrIV:308083-308317 2.74e-02 50_[-2(4.52e-05)]_2_[-2(5.81e-06)]_\ 12 chrX:617803-618020 1.21e-04 58_[-1(1.35e-08)]_17 chrV:138546-138782 2.03e-03 52_[-1(1.01e-06)]_23 chrXIII:732101-732326 7.79e-03 39_[-2(1.92e-06)]_43 chrX:415936-416142 4.46e-02 21_[+1(1.37e-05)]_54 chrX:703332-703565 3.11e-03 21_[+2(1.42e-06)]_11_[+2(3.42e-06)]_\ 32 chrXIII:379308-379518 6.55e-03 19_[+1(1.37e-05)]_56 chrII:45070-45281 4.36e-04 41_[-2(7.81e-08)]_1_[+2(6.85e-06)]_\ 22 chrXIII:808205-808437 1.46e-03 20_[+1(1.10e-06)]_55 chrVII:555416-555636 1.45e-04 30_[-2(5.53e-08)]_52 chrXIII:837807-838034 2.14e-04 58_[-1(3.86e-07)]_17 chrXVI:622546-622761 3.66e-04 2_[+1(1.74e-07)]_73 chrXII:167953-168154 2.54e-01 100 chrVII:287307-287562 4.29e-02 45_[+1(1.37e-05)]_30 chrXVI:406290-406482 2.80e-04 31_[-2(1.62e-07)]_51 chrXII:366134-366351 9.83e-01 100 chrVII:412255-412482 8.46e-05 23_[+1(2.03e-08)]_52 chrX:424435-424636 2.50e-04 4_[+1(6.36e-08)]_71 chrIV:222045-222248 7.18e-05 12_[+2(5.68e-05)]_6_[+2(2.81e-07)]_\ 46 chrXII:797070-797270 5.21e-08 58_[+3(3.60e-11)]_13 chrX:75440-75636 1.89e-03 27_[+2(3.12e-06)]_55 chrXII:448599-448812 4.36e-09 9_[-3(1.65e-08)]_2_[+1(1.10e-06)]_\ 35 chrVII:878741-878933 5.04e-03 2_[+1(1.37e-05)]_73 chrVI:137437-137651 1.22e-09 6_[-3(2.97e-08)]_4_[+1(7.54e-09)]_\ 36 chrVII:541738-541965 4.49e-08 49_[+3(3.60e-11)]_22 chrVIII:132990-133233 6.74e-06 20_[+1(2.51e-09)]_55 chrXIII:145972-146221 2.10e-04 34_[-2(1.40e-07)]_12_[-2(1.97e-05)]_\ 18 chrVII:1004135-1004324 7.90e-12 37_[-1(2.89e-07)]_2_[+3(6.36e-11)]_\ 7 chrXI:158305-158515 2.47e-02 36_[-2(7.43e-06)]_3_[-2(4.01e-05)]_\ 25 chrXII:897777-897983 1.87e-02 27_[-2(7.43e-06)]_55 chrXV:354044-354232 7.66e-01 100 chrX:355238-355444 2.69e-01 100 chrIV:1017172-1017385 9.63e-08 20_[-3(5.53e-11)]_51 chrVI:157925-158128 4.80e-04 5_[+1(1.74e-07)]_70 chrXV:300978-301182 1.38e-04 67_[-1(1.26e-07)]_8 chrVIII:388911-389107 1.36e-04 10_[+1(1.26e-07)]_65 chrV:431253-431471 1.54e-03 28_[+1(1.10e-06)]_47 chrXV:226604-226796 1.90e-04 5_[+1(9.02e-08)]_70 chrXIII:572858-573060 3.54e-04 20_[+1(5.64e-08)]_55 chrX:651344-651540 1.57e-02 50_[-2(8.72e-06)]_32 chrIV:1075420-1075657 1.78e-03 30_[+1(1.50e-05)]_45 chrV:177001-177206 5.21e-08 46_[+3(3.60e-11)]_25 chrVI:210615-210820 2.44e-03 14_[+1(3.86e-07)]_61 chrIX:248721-248922 5.87e-01 100 chrXIII:754499-754679 8.47e-03 30_[+2(1.58e-06)]_52 chrX:157510-157715 6.92e-07 40_[+2(6.72e-10)]_42 chrII:197380-197574 1.24e-06 67_[-1(7.78e-11)]_8 chrXII:605327-605535 1.49e-05 25_[+1(2.51e-09)]_50 chrXII:793791-793997 7.55e-03 74_[-1(3.27e-06)]_1 chrIII:142688-142884 2.77e-04 9_[+1(9.02e-08)]_66 chrXV:228217-228409 2.29e-05 68_[-1(7.54e-09)]_7 chrIV:359479-359669 4.21e-06 53_[-1(7.37e-10)]_22 chrIX:325653-325854 1.42e-06 45_[-1(6.12e-10)]_30 chrII:60937-61177 4.35e-03 63_[+2(6.61e-07)]_19 chrVIII:103974-104165 5.13e-01 100 chrXIII:362990-363176 4.55e-02 58_[+3(9.56e-05)]_13 chrXI:379580-379749 6.56e-05 66_[-1(2.03e-08)]_9 chrXII:592502-592692 1.21e-04 46_[+1(1.35e-08)]_29 chrII:36270-36480 1.95e-04 73_[-1(1.74e-07)]_2 chrVII:823395-823576 3.28e-05 47_[-1(2.03e-08)]_28 chrVII:731023-731246 6.90e-05 53_[-1(7.54e-09)]_22 chrIV:1135714-1135901 3.15e-01 100 chrVII:726488-726682 1.04e-03 65_[-2(3.59e-07)]_17 chrIX:300225-300411 5.54e-06 6_[+1(3.48e-09)]_69 chrXIII:131785-132001 3.19e-03 27_[+1(1.01e-06)]_48 chrXV:779789-779998 6.73e-03 19_[+2(1.10e-05)]_19_[-2(6.70e-05)]_\ 26 chrXVI:689455-689675 2.05e-05 50_[-1(2.13e-09)]_25 chrXVI:435872-436066 2.78e-03 19_[+1(2.17e-06)]_56 chrVI:221822-222000 3.84e-04 56_[+2(3.27e-08)]_26 chrIV:437669-437859 2.16e-05 58_[-1(2.51e-09)]_17 chrX:59093-59281 9.39e-07 9_[+1(6.12e-10)]_66 chrX:414859-415036 5.61e-06 69_[-1(3.48e-09)]_6 chrIX:257433-257612 5.29e-02 29_[-2(2.42e-05)]_10_[-2(4.52e-05)]_\ 25 chrXVI:210187-210375 7.07e-08 2_[-3(3.60e-11)]_69 chrVII:205413-205596 1.91e-04 67_[-1(9.02e-08)]_8 chrXVI:520250-520449 1.04e-01 100 chrVII:736234-736426 2.83e-03 60_[-1(1.01e-06)]_15 chrVIII:62674-62848 2.46e-02 71_[+3(9.56e-05)] chrVII:438647-438830 8.67e-04 44_[+2(3.42e-06)]_5_[+2(1.05e-07)]_\ 15 chrVII:828683-828906 4.91e-04 24_[+1(1.01e-06)]_51 chrVIII:116083-116285 9.39e-07 19_[+1(6.12e-10)]_56 chrIII:168291-168483 1.46e-03 9_[+1(1.10e-06)]_66 chrX:115930-116116 8.09e-08 7_[-3(3.60e-11)]_64 chrVI:167333-167516 1.09e-03 63_[-1(3.86e-07)]_12 chrVIII:237832-238036 3.78e-04 29_[+1(1.74e-07)]_46 chrXIV:241457-241660 4.71e-02 51_[-2(3.78e-05)]_31 chrXIII:372404-372585 1.34e-09 15_[-3(1.04e-08)]_4_[+1(2.03e-08)]_\ 27 chrXVI:76440-76614 9.49e-04 63_[+2(1.87e-07)]_19 chrXIV:96201-96401 5.57e-04 35_[+1(1.10e-06)]_5_[-1(7.95e-06)]_\ 10 chrXIV:104727-104899 1.60e-14 42_[-1(6.12e-10)]_3_[+3(8.62e-12)]_\ 1 chrXIII:259177-259355 4.83e-01 100 chrVII:328511-328718 5.21e-08 19_[+3(3.60e-11)]_52 chrVII:700543-700751 6.88e-01 100 chrXVI:860266-860440 7.40e-01 100 chrVI:162113-162301 2.84e-04 71_[-1(9.02e-08)]_4 chrXIV:102610-102791 4.42e-05 66_[-1(7.54e-09)]_9 chrVIII:475676-475865 5.94e-08 [-3(9.46e-10)]_3_[+1(1.50e-05)]_43 chrIV:992728-992893 2.64e-04 72_[-1(9.02e-08)]_3 chrXI:308141-308314 1.79e-04 14_[+1(2.03e-08)]_61 chrVI:95591-95754 6.26e-03 11_[+2(9.44e-06)]_71 chrVII:440692-440913 3.58e-04 29_[+1(1.74e-07)]_46 chrIII:90805-91010 1.78e-04 2_[-1(9.02e-08)]_73 chrVI:191522-191702 3.83e-06 25_[+1(3.43e-10)]_50 chrVIII:134207-134435 1.55e-04 50_[-1(1.10e-06)]_25 chrXVI:56134-56339 4.46e-02 62_[+1(1.37e-05)]_13 chrV:469360-469544 1.40e-04 55_[-1(2.03e-08)]_20 chrVII:700961-701157 4.75e-06 13_[+1(7.37e-10)]_62 chrII:226979-227167 3.49e-05 52_[-1(2.51e-09)]_23 chrIV:83451-83626 4.57e-05 60_[-1(9.02e-08)]_15 chrIV:488750-488962 8.09e-09 5_[-3(1.15e-09)]_4_[+1(1.50e-06)]_\ 37 chrII:266310-266476 1.60e-14 35_[-1(6.12e-10)]_3_[+3(8.62e-12)]_\ 8 chrII:326787-326991 3.83e-03 [+1(1.50e-06)]_75 chrXV:274551-274757 1.50e-06 69_[-1(3.43e-10)]_6 chrV:354833-355010 7.96e-08 63_[+3(3.60e-11)]_8 chrXII:427016-427207 1.12e-02 71_[-1(3.27e-06)]_4 chrXI:490844-491041 4.29e-01 100 chrXVI:775772-775940 4.78e-03 4_[+1(2.17e-06)]_71 chrV:441885-442100 2.82e-02 100 chrXIII:290708-290897 5.21e-08 49_[+3(3.60e-11)]_22 chrXII:734698-734889 1.43e-06 59_[-1(7.78e-11)]_16 chrXI:578872-579132 9.63e-08 13_[-1(7.37e-10)]_62 chrXI:108832-109001 1.14e-03 33_[-2(1.48e-05)]_[-2(1.87e-07)]_31 chrXII:784270-784437 3.10e-06 51_[-1(3.43e-10)]_24 chrVII:115382-115573 2.23e-06 61_[-1(7.37e-10)]_14 chrI:139074-139237 2.37e-04 47_[-1(1.26e-07)]_28 chrII:645059-645246 9.17e-08 65_[+3(3.60e-11)]_6 chrVII:366184-366355 2.14e-03 15_[+2(4.61e-07)]_67 chrXIII:296859-297043 3.98e-04 61_[-2(5.89e-07)]_21 chrIII:127613-127801 3.98e-05 59_[-1(7.54e-09)]_16 chrXVI:819431-819619 1.44e-06 54_[-1(7.78e-11)]_21 chrXIV:442923-443090 7.39e-04 50_[-1(9.02e-08)]_25 chrXIV:568039-568204 2.37e-04 44_[-1(1.26e-07)]_31 chrV:288399-288621 1.92e-05 38_[+1(2.13e-09)]_37 chrIV:520877-521041 1.21e-03 63_[-1(1.10e-06)]_12 chrII:604211-604378 4.63e-04 53_[-2(1.03e-06)]_29 chrXIII:586589-586778 1.34e-09 17_[-3(1.04e-08)]_4_[+1(2.03e-08)]_\ 25 chrX:524002-524188 3.45e-05 22_[+1(2.51e-09)]_53 chrV:131092-131274 8.74e-01 100 chrX:538484-538659 8.84e-09 34_[-1(1.50e-06)]_2_[+3(9.46e-10)]_\ 10 chrXI:162406-162624 4.09e-09 36_[-3(7.73e-10)]_2_[+1(1.01e-06)]_\ 8 chrXI:141003-141172 5.21e-08 22_[-3(3.60e-11)]_49 chrIX:324301-324481 4.52e-03 7_[+1(3.27e-06)]_68 chrIV:1201650-1201827 5.77e-06 62_[-1(3.48e-09)]_13 chrXII:374238-374467 3.67e-05 53_[-1(2.33e-08)]_22 chrXIII:196097-196273 6.93e-05 9_[+1(1.26e-07)]_66 chrVII:845545-845749 2.51e-04 52_[-1(9.02e-08)]_23 chrIII:151282-151447 5.78e-06 16_[+1(3.48e-09)]_59 chrII:350714-350885 8.51e-01 100 chrXII:932256-932412 2.02e-04 13_[+2(7.81e-08)]_69 chrV:61886-62050 2.90e-04 16_[+1(9.02e-08)]_59 chrVII:110584-110765 4.78e-02 15_[-3(9.56e-05)]_56 chrIV:1150869-1151045 1.52e-06 8_[+1(3.43e-10)]_67 chrXV:571847-572041 5.93e-03 64_[-1(3.27e-06)]_11 chrI:166185-166382 9.91e-15 34_[-1(6.12e-10)]_3_[+3(3.52e-12)]_\ 9 chrXII:1028316-1028487 4.47e-03 59_[+2(3.74e-06)]_23 chrV:86509-86686 3.42e-05 57_[-1(2.51e-09)]_18 chrVIII:358492-358661 6.26e-04 17_[+1(1.74e-07)]_58 chrXI:46748-46919 1.02e-01 100 chrX:378260-378433 8.00e-05 64_[-1(2.03e-08)]_11 chrIV:411354-411526 1.55e-03 41_[-2(2.26e-05)]_10_[-2(7.07e-05)]_\ 13 chrIV:1095378-1095576 4.67e-04 8_[+1(9.02e-08)]_67 chrXV:663780-663952 1.34e-09 10_[-3(1.04e-08)]_4_[+1(2.03e-08)]_\ 32 chrXII:818531-818710 1.38e-04 39_[-1(7.13e-06)]_2_[+3(4.42e-05)]_\ 5 chrIV:1305526-1305682 2.39e-01 100 chrVII:422977-423148 3.33e-01 100 chrXII:628358-628566 2.33e-01 100 chrXV:438547-438725 1.99e-06 57_[-1(7.37e-10)]_18 chrVII:876298-876454 2.06e-06 68_[-1(3.48e-09)]_7 chrX:233832-234006 2.51e-05 70_[-1(2.33e-08)]_5 chrXVI:810585-810757 5.40e-05 55_[-1(7.54e-09)]_20 chrX:354158-354358 1.72e-03 36_[-1(3.86e-07)]_39 chrIX:197485-197676 5.24e-08 62_[+3(5.53e-11)]_9 chrVII:774238-774390 9.92e-01 100 chrVII:739047-739204 1.21e-06 47_[-1(7.78e-11)]_28 chrX:204632-204792 4.30e-03 73_[-1(3.27e-06)]_2 chrIX:68285-68443 5.45e-04 32_[-2(7.81e-08)]_50 chrIII:149801-149983 6.65e-01 100 chrXV:288148-288300 9.57e-05 18_[-1(3.86e-07)]_57 chrX:396719-396889 2.90e-04 16_[+1(9.02e-08)]_59 chrII:405787-405941 1.08e-03 64_[-1(1.01e-06)]_11 chrVI:180955-181137 6.56e-05 22_[+1(9.02e-08)]_53 chrVII:779514-779679 1.00e-03 70_[-1(1.10e-06)]_5 chrVII:531529-531676 4.28e-03 58_[-1(3.27e-06)]_17 chrXVI:880293-880472 6.27e-07 11_[+1(7.78e-11)]_64 chrXII:875286-875454 4.21e-06 56_[-1(7.37e-10)]_19 chrXII:1019138-1019289 1.26e-01 100 chrXIII:747903-748075 3.42e-01 100 chrV:135406-135579 5.45e-06 29_[+1(3.48e-09)]_46 chrIX:183437-183616 1.09e-06 11_[+1(7.78e-11)]_64 chrXIV:632498-632672 6.03e-05 64_[-1(7.54e-09)]_11 chrXI:219797-219960 3.55e-06 67_[-1(2.81e-10)]_8 chrXII:962998-963141 1.30e-04 10_[+1(6.36e-08)]_65 chrXIII:480624-480778 9.29e-07 16_[+1(3.48e-09)]_59 chrXVI:560217-560327 7.11e-05 41_[+1(1.74e-07)]_34 chrXII:498597-498748 2.08e-03 47_[-2(3.59e-07)]_35 chrIX:370303-370462 9.37e-01 100 chrV:435736-435894 9.24e-12 1_[-3(2.85e-09)]_3_[+1(3.48e-09)]_\ 42 chrVII:122182-122304 4.03e-01 100 chrXIII:420573-420740 1.43e-05 29_[+1(2.03e-08)]_46 chrXIII:463471-463630 1.18e-02 54_[-1(3.27e-06)]_21 chrV:100019-100159 5.02e-01 100 chrXV:113719-113874 2.71e-06 56_[-1(6.12e-10)]_19 chrIV:434268-434399 1.73e-06 27_[+1(6.12e-10)]_48 chrV:487293-487455 5.21e-08 48_[-3(3.60e-11)]_23 chrXI:74542-74690 7.03e-05 58_[-1(7.54e-09)]_17 chrIV:619937-620100 8.40e-07 15_[-3(1.34e-05)]_3_[+1(2.33e-08)]_\ 28 chrXV:594337-594470 4.95e-05 46_[+1(3.51e-07)]_29 chrV:438608-438766 1.93e-04 63_[-1(2.03e-08)]_12 chrXIII:168738-168878 2.25e-03 37_[-1(3.86e-07)]_38 chrIV:358184-358302 1.17e-03 53_[+2(8.25e-07)]_29 chrXII:214892-215018 2.45e-06 24_[+1(6.12e-10)]_51 chrVII:544591-544708 1.18e-02 23_[+1(3.27e-06)]_52 chrX:374506-374651 9.27e-04 23_[+1(1.01e-06)]_52 chrXVI:378737-378886 1.69e-04 51_[+2(2.58e-06)]_7_[+2(3.18e-07)]_\ 6 chrI:82040-82156 1.85e-03 59_[+2(1.42e-06)]_23 chrXVI:188707-188839 2.36e-04 13_[-1(8.21e-05)]_25_[-2(1.02e-05)]_\ 19 chrXIII:504755-504891 7.41e-01 100 chrIX:336358-336530 1.31e-02 [+1(3.27e-06)]_75 chrVII:857454-857565 8.05e-05 6_[+1(9.02e-08)]_69 chrIII:178409-178513 3.06e-03 58_[+2(4.07e-07)]_24 chrXV:678961-679101 2.04e-05 26_[+2(5.53e-08)]_56 chrIV:802694-802830 4.36e-09 33_[-3(1.65e-08)]_2_[+1(1.10e-06)]_\ 11 chrXII:656964-657066 4.71e-06 15_[+1(2.81e-10)]_60 chrXV:710088-710225 5.86e-01 100 chrX:531754-531890 3.71e-04 56_[-1(9.02e-08)]_19 chrV:312048-312191 6.91e-06 [+1(6.12e-10)]_75 chrVII:794346-794481 4.93e-06 54_[-1(6.12e-10)]_21 chrII:347503-347658 1.78e-04 73_[-1(6.36e-08)]_2 chrV:443187-443329 2.62e-12 8_[-3(9.10e-09)]_4_[+1(7.78e-11)]_\ 34 chrXIV:560653-560786 1.60e-14 38_[-3(8.62e-12)]_3_[+1(6.12e-10)]_\ 5 chrXV:282042-282176 6.78e-02 71_[+2(6.35e-05)]_11 chrXII:48867-49010 2.29e-03 12_[+2(6.61e-07)]_70 chrVII:930959-931124 2.47e-04 6_[+1(9.02e-08)]_69 chrVIII:149027-149164 8.89e-04 34_[+2(1.58e-06)]_48 chrXI:431456-431579 4.08e-04 23_[-2(1.62e-07)]_1_[-2(9.63e-05)]_\ 40 chrIX:254340-254442 2.54e-03 14_[+2(1.58e-06)]_68 chrXI:513353-513479 9.64e-03 11_[+1(3.27e-06)]_64 chrXVI:338858-338991 2.24e-02 19_[+1(3.21e-05)]_56 chrXV:978952-979045 3.89e-01 93 chrVII:185715-185796 4.18e-12 13_[-3(2.85e-09)]_3_[+1(3.48e-09)]_\ 11 chrVIII:466947-467058 2.35e-11 38_[-1(2.89e-07)]_2_[+3(1.09e-10)]_\ 6 chrXVI:572127-572403 1.81e-04 54_[-1(9.02e-08)]_21 chrXIII:321173-321296 5.23e-06 9_[+1(2.81e-10)]_66 chrIV:1352470-1352604 5.67e-06 25_[+1(3.48e-09)]_50 chrIV:568798-568900 9.78e-01 100 chrXV:94571-94679 7.98e-04 56_[-2(1.74e-06)]_26 chrX:517736-518012 1.12e-06 3_[-3(2.65e-08)]_2_[+1(3.21e-05)]_\ 41 chrXV:976401-976493 4.58e-10 20_[-1(5.64e-08)]_3_[+3(2.62e-09)]_\ 15 chrXI:458523-458615 6.31e-04 34_[-1(9.02e-08)]_33 chrIV:579154-579283 3.20e-02 54_[-2(8.05e-06)]_28 chrXIII:91807-92083 4.74e-01 100 chrXIV:374702-374978 8.72e-01 100 chrIV:1450931-1451207 2.14e-03 37_[+2(3.78e-05)]_6_[+2(3.59e-07)]_\ 21 chrIV:519680-519778 1.65e-04 63_[-1(6.36e-08)]_10 chrXIV:444566-444659 3.28e-04 52_[+2(2.81e-07)]_23 chrIII:123454-123730 1.50e-02 49_[-3(1.38e-05)]_22 chrXII:1052084-1052182 2.44e-12 1_[-3(9.10e-09)]_4_[+1(7.78e-11)]_\ 39 chrXV:110960-111087 5.57e-04 34_[+1(1.10e-06)]_41 chrXIII:224078-224354 3.02e-05 21_[+2(2.04e-09)]_7_[+2(8.72e-06)]_\ 36 chrII:9412-9688 4.51e-01 100 chrXIV:631888-631989 1.79e-03 3_[+1(4.76e-06)]_72 chrIV:490988-491264 5.06e-02 51_[-2(1.60e-05)]_31 chrIV:946322-946598 9.85e-01 100 chrXV:1025771-1026047 2.57e-03 13_[-2(5.33e-06)]_69 chrXVI:302700-302976 6.03e-03 37_[-2(2.84e-06)]_45 chrIV:667840-668116 5.14e-01 100 chrXVI:360069-360345 8.52e-01 100 chrVII:405414-405690 1.00e+00 100 chrX:607876-608152 1.23e-03 28_[-2(3.59e-07)]_[-2(1.02e-05)]_36 chrVI:226579-226855 9.24e-12 35_[-3(2.85e-09)]_3_[+1(3.48e-09)]_\ 8 chrXII:262814-263090 1.43e-03 39_[-2(1.60e-05)]_2_[-2(1.62e-07)]_\ 23 chrXV:712413-712689 5.02e-01 100 chrII:181363-181639 4.75e-03 40_[-2(1.03e-06)]_42 chrIV:229513-229789 9.86e-04 25_[-2(1.28e-06)]_6_[-2(4.61e-07)]_\ 33 chrIII:308712-308988 1.23e-01 100 chrXI:84067-84343 6.65e-06 53_[-1(6.36e-08)]_22 chrXIV:547047-547323 2.47e-02 17_[+3(8.95e-05)]_54 chrIV:1461567-1461843 3.52e-01 100 chrVII:706949-707225 5.16e-01 100 chrV:551295-551384 1.73e-12 4_[-3(9.10e-09)]_4_[+1(7.78e-11)]_\ 27 chrXVI:794485-794761 5.51e-04 60_[-2(1.92e-06)]_[-2(1.62e-07)]_4 chrIII:295410-295489 8.08e-01 79 chrXV:487431-487707 7.65e-01 100 chrIV:217241-217517 5.49e-01 100 chrXII:232557-232833 3.35e-01 100 chrXII:975876-976152 1.30e-09 33_[-3(2.97e-08)]_4_[+1(7.54e-09)]_\ 9 chrXIV:726020-726296 1.34e-01 100 chrXV:1004063-1004339 9.07e-01 100 chrVII:319775-320051 6.21e-01 100 chrVIII:146006-146282 8.37e-01 100 chrV:362187-362463 1.01e-02 71_[-2(4.88e-06)]_11 chrXV:464344-464620 2.01e-04 18_[-1(1.26e-07)]_57 chrXIV:330819-331095 1.25e-03 39_[-2(1.15e-06)]_43 chrXVI:281606-281882 2.64e-03 68_[-2(6.61e-07)]_14 chrX:76212-76488 3.61e-01 100 chrV:434400-434676 1.58e-01 67_[-3(9.56e-05)]_4 chrXV:738288-738564 4.73e-01 100 chrXII:522161-522437 3.74e-03 25_[-2(5.22e-07)]_7_[-2(1.03e-06)]_\ 32 chrIX:210621-210897 6.47e-01 100 chrXV:854051-854327 6.77e-08 62_[-3(3.52e-12)]_9 chrXII:899172-899448 9.53e-01 100 chrXII:283352-283628 8.20e-01 100 chrX:228090-228366 6.06e-01 100 chrXII:348279-348555 9.56e-01 100 chrVII:311170-311446 9.44e-01 100 chrIV:1059538-1059814 1.11e-01 100 chrXII:369267-369543 1.07e-01 100 chrXII:838249-838525 3.58e-01 100 chrII:406623-406899 3.93e-01 100 chrVII:673551-673827 6.52e-01 100 chrXIV:500344-500620 9.73e-01 100 chrX:139476-139752 5.04e-01 100 chrVIII:175098-175374 6.25e-02 100 chrXIII:252344-252620 1.35e-01 100 chrIV:210270-210546 1.89e-01 100 chrXII:898619-898895 2.28e-01 100 chrV:67266-67542 7.46e-01 100 chrXIII:146992-147268 6.23e-02 100 chrIX:373479-373755 5.45e-01 100 chrX:542027-542303 7.79e-01 100 chrXIV:577188-577464 1.63e-01 100 chrIV:645029-645305 8.31e-06 50_[-3(1.65e-08)]_21 chrXIV:64271-64547 9.39e-01 100 chrXII:637190-637466 5.80e-01 100 chrIX:24866-25142 4.93e-01 100 chrXII:939850-940126 4.47e-01 100 chrXIV:493984-494260 4.20e-02 52_[+1(2.78e-05)]_23 chrXV:159529-159805 3.68e-01 100 chrXII:282566-282842 2.31e-03 16_[-2(4.07e-07)]_66 chrXIV:46557-46833 3.14e-01 100 chrXV:327126-327402 6.02e-02 100 chrXVI:71207-71483 4.92e-01 100 chrIV:1115064-1115340 3.13e-01 100 chrXVI:120894-121170 6.57e-01 100 chrXIII:702236-702512 4.13e-01 100 chrII:88936-89212 6.84e-01 100 chrXII:637401-637677 1.26e-02 100 chrII:89177-89453 3.13e-01 100 chrIX:25066-25342 1.01e-01 100 chrXVI:71416-71692 9.37e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************