******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--RPD3/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrIX:177641-177980 1.0000 100 chrXVI:303300-304169 1.0000 100 chrIV:1442556-1443072 1.0000 100 chrXVI:377790-378306 1.0000 100 chrV:122617-122764 1.0000 100 chrVII:914834-915216 1.0000 100 chrVIII:75646-75978 1.0000 100 chrVII:970713-971229 1.0000 100 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1.0000 100 chrXII:242512-242745 1.0000 100 chrVII:518551-519067 1.0000 100 chrVII:545489-545756 1.0000 100 chrV:236519-237035 1.0000 100 chrXIII:533723-534239 1.0000 100 chrVII:598896-599136 1.0000 100 chrIV:221561-221803 1.0000 100 chrVI:54487-55003 1.0000 100 chrXII:728219-728568 1.0000 100 chrXII:440808-441003 1.0000 100 chrXVI:461527-462043 1.0000 100 chrXII:229953-230469 1.0000 100 chrIV:884218-884588 1.0000 100 chrXI:68205-68607 1.0000 100 chrXII:1018183-1018563 1.0000 100 chrXIII:879526-879741 1.0000 100 chrVIII:411215-411671 1.0000 100 chrIV:1201598-1201940 1.0000 100 chrIX:317745-318038 1.0000 100 chrVII:533945-534414 1.0000 100 chrXII:523140-523427 1.0000 100 chrXII:921865-922381 1.0000 100 chrV:409192-409568 1.0000 100 chrIX:316959-317285 1.0000 100 chrXV:976341-976653 1.0000 100 chrII:9349-9865 1.0000 100 chrVII:701996-702512 1.0000 100 chrVIII:282412-282590 1.0000 100 chrX:79224-79324 1.0000 100 chrV:141022-141389 1.0000 100 chrX:91280-91380 1.0000 100 chrVIII:115985-116377 1.0000 100 chrXV:897564-897693 1.0000 100 chrXII:722795-723311 1.0000 100 chrXII:819418-819934 1.0000 100 chrXVI:188635-188956 1.0000 100 chrXIV:722428-722944 1.0000 100 chrVIII:504805-504961 1.0000 100 chrII:530444-530960 1.0000 100 chrI:70439-71056 1.0000 100 chrXII:806393-806929 1.0000 100 chrVII:866419-866935 1.0000 100 chrV:79366-79639 1.0000 100 chrXVI:297911-298100 1.0000 100 chrVII:1051658-1052174 1.0000 100 chrXIV:230173-230440 1.0000 100 chrXIII:534013-534529 1.0000 100 chrV:61201-62091 1.0000 100 chrVII:339112-339628 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--RPD3/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--RPD3/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--RPD3/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 564 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 56400 N= 564 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.308 C 0.192 G 0.192 T 0.308 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--RPD3/background): A 0.309 C 0.191 G 0.191 T 0.309 ******************************************************************************** ******************************************************************************** MOTIF KTGGCYBAGTBGKTARRGCS MEME-1 width = 20 sites = 44 llr = 692 E-value = 5.8e-089 ******************************************************************************** -------------------------------------------------------------------------------- Motif KTGGCYBAGTBGKTARRGCS MEME-1 Description -------------------------------------------------------------------------------- Simplified A 2:3:::2a2::::1855::: pos.-specific C ::::854::13::1:12:74 probability G 4:7a:22:8:4a61:43936 matrix T 4a::243::94:462:11:: bits 2.4 * 2.2 * * 1.9 * * 1.7 ** ** * * Relative 1.4 **** ** * ** Entropy 1.2 **** *** * *** (22.7 bits) 1.0 **** *** ** * *** 0.7 ***** *** ** ** *** 0.5 ****** ****** ** *** 0.2 ******************** 0.0 -------------------- Multilevel GTGGCCCAGTGGGTAAAGCG consensus T A TT T T TGG GC sequence G C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTGGCYBAGTBGKTARRGCS MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------- chrXII:784226-784574 + 10 4.76e-11 ACCGTCCCA GTGGCCGAGTGGTTAAGGCG ATGCCTGCTA chrIV:1150696-1151109 - 64 4.76e-11 TTCAGTCCCA GTGGCCGAGTGGTTAAGGCG ATGCCTGCTA chrIV:1305510-1305779 + 42 1.36e-10 TTAAGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrX:197212-197312 - 48 3.37e-10 ATTAGGGCGT GTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXII:656867-657107 - 44 3.37e-10 AATTGGGCGT GTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrVII:774193-774540 + 39 3.37e-10 AATTGGGCGT GTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXI:578801-579234 + 4 4.68e-10 TTG TTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrIV:359441-359747 + 39 4.68e-10 CTCATCCTTG TTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrVII:115349-115715 + 12 4.68e-10 CTCATCCTTG TTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXVI:769093-769531 - 15 4.68e-10 CTCATCCTTG TTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXII:875237-875568 + 30 4.68e-10 CTCATCCTTG TTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXVI:689427-689784 + 16 5.48e-10 TTTGGGCACT ATGGCCGAGTGGTTAAGGCG ACAGACTTGA chrV:288312-288684 - 51 5.48e-10 GATAGGCACT ATGGCCGAGTGGTTAAGGCG ACAGACTTGA chrVIII:115985-116377 - 23 1.02e-09 TAGAGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrIV:434174-434439 - 55 1.02e-09 AGAAGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrXIV:104665-105038 + 10 1.02e-09 TGAGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrXII:734705-734935 + 38 1.80e-09 GTTTGGTCTC TTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrIV:1201598-1201940 + 37 3.91e-09 AATAGCCTTG TTGGCGCAATCGGTAGCGCG TATGACTCTT chrVIII:237708-238092 - 64 3.91e-09 GTAAGCGGAT TTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXIV:374774-375047 + 15 3.91e-09 ATAAGCGGAC TTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXVI:622453-622818 - 21 3.91e-09 ATATGCGGAT TTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrVII:185567-185907 - 74 3.91e-09 AGCCTTG TTGGCGCAATCGGTAGCGCG TATGACTCTT chrX:414818-414918 + 46 3.91e-09 ATTAGCCTTG TTGGCGCAATCGGTAGCGCG TATGACTCTT chrIV:619866-620137 - 65 1.51e-08 CTTGTTCCTC GTGGCCCAATGGTCACGGCG TCTGGCTACG chrXII:374165-374511 + 73 1.51e-08 CTTGTTCCTC GTGGCCCAATGGTCACGGCG TCTGGCTA chrII:9349-9865 + 32 1.85e-08 TCGTGGAGGG TTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrXVI:810586-810784 + 47 2.04e-08 TTGCGACTCC ATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrIV:884218-884588 + 14 3.64e-08 AAATGCTCGT GTAGCTCAGTGGTTAGAGCT TCGTGCTTAT chrX:422803-422903 + 35 4.37e-08 GTATGCTTCA GTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrXI:379528-379808 + 68 1.12e-07 AATAGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrV:438555-438834 + 62 1.12e-07 ATTAGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXIII:372415-372623 - 24 1.12e-07 ACCTGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrVII:823349-823654 + 37 1.12e-07 GAGTGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrIII:90747-91069 + 7 1.22e-07 GGTTGT TTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrVII:205401-205700 + 27 1.22e-07 AAGTGGTTGT TTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrXII:628239-628615 + 12 1.22e-07 AAGTGGTTGT TTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrXVI:860244-860543 + 42 3.48e-07 ACAAGCGCAA GTGGTTTAGTGGTAAAATCC AACGTTGCCA chrX:531717-531817 + 16 3.48e-07 GTGAGCGCAA GTGGTTTAGTGGTAAAATCC AACGTTGCCA chrVI:162070-162375 + 62 3.48e-07 ACAAGCGCAA GTGGTTTAGTGGTAAAATCC AACGTTGCCA chrVII:845482-845874 + 27 3.48e-07 ACAAGCGCAA GTGGTTTAGTGGTAAAATCC AACGTTGCCA chrXII:951210-951726 - 38 4.54e-06 AGATGATAAT GTGGCTGAAGTGTTAGCAGC ATTAGACAAC chrXII:855944-857018 - 17 7.25e-06 ATTCAAAGCA TCAGCTAAAACGGAAGAGCG AGTCATTTTT chrIX:393369-393683 + 54 7.58e-06 GTGCCAATTG AAGTCTAAGTTGGGACAGCC ATTAACGATA chrI:72916-73400 - 49 1.27e-05 AGCCTTTTCA ATACCGAAGTTGATACGGGC TTCAACATCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTGGCYBAGTBGKTARRGCS MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:784226-784574 4.8e-11 9_[+1]_71 chrIV:1150696-1151109 4.8e-11 63_[-1]_17 chrIV:1305510-1305779 1.4e-10 41_[+1]_39 chrX:197212-197312 3.4e-10 47_[-1]_33 chrXII:656867-657107 3.4e-10 43_[-1]_37 chrVII:774193-774540 3.4e-10 38_[+1]_42 chrXI:578801-579234 4.7e-10 3_[+1]_77 chrIV:359441-359747 4.7e-10 38_[+1]_42 chrVII:115349-115715 4.7e-10 11_[+1]_69 chrXVI:769093-769531 4.7e-10 14_[-1]_66 chrXII:875237-875568 4.7e-10 29_[+1]_51 chrXVI:689427-689784 5.5e-10 15_[+1]_65 chrV:288312-288684 5.5e-10 50_[-1]_30 chrVIII:115985-116377 1e-09 22_[-1]_58 chrIV:434174-434439 1e-09 54_[-1]_26 chrXIV:104665-105038 1e-09 9_[+1]_71 chrXII:734705-734935 1.8e-09 37_[+1]_43 chrIV:1201598-1201940 3.9e-09 36_[+1]_44 chrVIII:237708-238092 3.9e-09 63_[-1]_17 chrXIV:374774-375047 3.9e-09 14_[+1]_66 chrXVI:622453-622818 3.9e-09 20_[-1]_60 chrVII:185567-185907 3.9e-09 73_[-1]_7 chrX:414818-414918 3.9e-09 45_[+1]_35 chrIV:619866-620137 1.5e-08 64_[-1]_16 chrXII:374165-374511 1.5e-08 72_[+1]_8 chrII:9349-9865 1.8e-08 31_[+1]_49 chrXVI:810586-810784 2e-08 46_[+1]_34 chrIV:884218-884588 3.6e-08 13_[+1]_67 chrX:422803-422903 4.4e-08 34_[+1]_46 chrXI:379528-379808 1.1e-07 67_[+1]_13 chrV:438555-438834 1.1e-07 61_[+1]_19 chrXIII:372415-372623 1.1e-07 23_[-1]_57 chrVII:823349-823654 1.1e-07 36_[+1]_44 chrIII:90747-91069 1.2e-07 6_[+1]_74 chrVII:205401-205700 1.2e-07 26_[+1]_54 chrXII:628239-628615 1.2e-07 11_[+1]_69 chrXVI:860244-860543 3.5e-07 41_[+1]_39 chrX:531717-531817 3.5e-07 15_[+1]_65 chrVI:162070-162375 3.5e-07 61_[+1]_19 chrVII:845482-845874 3.5e-07 26_[+1]_54 chrXII:951210-951726 4.5e-06 37_[-1]_43 chrXII:855944-857018 7.2e-06 16_[-1]_64 chrIX:393369-393683 7.6e-06 53_[+1]_27 chrI:72916-73400 1.3e-05 48_[-1]_32 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTGGCYBAGTBGKTARRGCS MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF KTGGCYBAGTBGKTARRGCS width=20 seqs=44 chrXII:784226-784574 ( 10) GTGGCCGAGTGGTTAAGGCG 1 chrIV:1150696-1151109 ( 64) GTGGCCGAGTGGTTAAGGCG 1 chrIV:1305510-1305779 ( 42) TTGGCCGAGTGGTTAAGGCG 1 chrX:197212-197312 ( 48) GTGGCGTAGTCGGTAGCGCG 1 chrXII:656867-657107 ( 44) GTGGCGTAGTCGGTAGCGCG 1 chrVII:774193-774540 ( 39) GTGGCGTAGTCGGTAGCGCG 1 chrXI:578801-579234 ( 4) TTAGCTCAGTTGGTAGAGCG 1 chrIV:359441-359747 ( 39) TTAGCTCAGTTGGTAGAGCG 1 chrVII:115349-115715 ( 12) TTAGCTCAGTTGGTAGAGCG 1 chrXVI:769093-769531 ( 15) TTAGCTCAGTTGGTAGAGCG 1 chrXII:875237-875568 ( 30) TTAGCTCAGTTGGTAGAGCG 1 chrXVI:689427-689784 ( 16) ATGGCCGAGTGGTTAAGGCG 1 chrV:288312-288684 ( 51) ATGGCCGAGTGGTTAAGGCG 1 chrVIII:115985-116377 ( 23) ATGGCCAAGTTGGTAAGGCG 1 chrIV:434174-434439 ( 55) ATGGCCAAGTTGGTAAGGCG 1 chrXIV:104665-105038 ( 10) ATGGCCAAGTTGGTAAGGCG 1 chrXII:734705-734935 ( 38) TTGGCCCAGTTGGTTAAGGC 1 chrIV:1201598-1201940 ( 37) TTGGCGCAATCGGTAGCGCG 1 chrVIII:237708-238092 ( 64) TTAGCTCAGTTGGGAGAGCG 1 chrXIV:374774-375047 ( 15) TTAGCTCAGTTGGGAGAGCG 1 chrXVI:622453-622818 ( 21) TTAGCTCAGTTGGGAGAGCG 1 chrVII:185567-185907 ( 74) TTGGCGCAATCGGTAGCGCG 1 chrX:414818-414918 ( 46) TTGGCGCAATCGGTAGCGCG 1 chrIV:619866-620137 ( 65) GTGGCCCAATGGTCACGGCG 1 chrXII:374165-374511 ( 73) GTGGCCCAATGGTCACGGCG 1 chrII:9349-9865 ( 32) TTGGCCGAGTGGTCTAAGGC 1 chrXVI:810586-810784 ( 47) ATGGCCAAGTTGGTTAAGGC 1 chrIV:884218-884588 ( 14) GTAGCTCAGTGGTTAGAGCT 1 chrX:422803-422903 ( 35) GTAGCTCAGTAGGAAGAGCG 1 chrXI:379528-379808 ( 68) GTGGTCTAGTCGGTTATGGC 1 chrV:438555-438834 ( 62) GTGGTCTAGTCGGTTATGGC 1 chrXIII:372415-372623 ( 24) GTGGTCTAGTCGGTTATGGC 1 chrVII:823349-823654 ( 37) GTGGTCTAGTCGGTTATGGC 1 chrIII:90747-91069 ( 7) TTGGCCGAGCGGTCTAAGGC 1 chrVII:205401-205700 ( 27) TTGGCCGAGCGGTCTAAGGC 1 chrXII:628239-628615 ( 12) TTGGCCGAGCGGTCTAAGGC 1 chrXVI:860244-860543 ( 42) GTGGTTTAGTGGTAAAATCC 1 chrX:531717-531817 ( 16) GTGGTTTAGTGGTAAAATCC 1 chrVI:162070-162375 ( 62) GTGGTTTAGTGGTAAAATCC 1 chrVII:845482-845874 ( 27) GTGGTTTAGTGGTAAAATCC 1 chrXII:951210-951726 ( 38) GTGGCTGAAGTGTTAGCAGC 1 chrXII:855944-857018 ( 17) TCAGCTAAAACGGAAGAGCG 1 chrIX:393369-393683 ( 54) AAGTCTAAGTTGGGACAGCC 1 chrI:72916-73400 ( 49) ATACCGAAGTTGATACGGGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTGGCYBAGTBGKTARRGCS MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 45684 bayes= 11.5529 E= 5.8e-089 -77 -1210 110 40 -376 -306 -1210 162 -18 -1210 193 -1210 -1210 -306 232 -376 -1210 210 -1210 -77 -1210 125 -26 32 -96 93 25 -31 169 -1210 -1210 -1210 -96 -1210 214 -1210 -376 -148 -306 152 -376 39 93 23 -1210 -1210 239 -1210 -376 -1210 163 32 -118 -48 -107 104 132 -1210 -1210 -45 69 -107 110 -1210 69 -26 39 -177 -376 -1210 222 -177 -1210 193 52 -1210 -1210 102 163 -376 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTGGCYBAGTBGKTARRGCS MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 44 E= 5.8e-089 0.181818 0.000000 0.409091 0.409091 0.022727 0.022727 0.000000 0.954545 0.272727 0.000000 0.727273 0.000000 0.000000 0.022727 0.954545 0.022727 0.000000 0.818182 0.000000 0.181818 0.000000 0.454545 0.159091 0.386364 0.159091 0.363636 0.227273 0.250000 1.000000 0.000000 0.000000 0.000000 0.159091 0.000000 0.840909 0.000000 0.022727 0.068182 0.022727 0.886364 0.022727 0.250000 0.363636 0.363636 0.000000 0.000000 1.000000 0.000000 0.022727 0.000000 0.590909 0.386364 0.136364 0.136364 0.090909 0.636364 0.772727 0.000000 0.000000 0.227273 0.500000 0.090909 0.409091 0.000000 0.500000 0.159091 0.250000 0.090909 0.022727 0.000000 0.886364 0.090909 0.000000 0.727273 0.272727 0.000000 0.000000 0.386364 0.590909 0.022727 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTGGCYBAGTBGKTARRGCS MEME-1 regular expression -------------------------------------------------------------------------------- [GT]T[GA]GC[CT][CTG]AGT[GTC]G[GT]T[AT][AG][AG]G[CG][GC] -------------------------------------------------------------------------------- Time 313.24 secs. ******************************************************************************** ******************************************************************************** MOTIF TMAYCDKRAGGTCMBSGGTTCGATYCCSVK MEME-2 width = 30 sites = 31 llr = 674 E-value = 1.2e-106 ******************************************************************************** -------------------------------------------------------------------------------- Motif TMAYCDKRAGGTCMBSGGTTCGATYCCSVK MEME-2 Description -------------------------------------------------------------------------------- Simplified A 1581:2247132:41:1::::2a2::1:31 pos.-specific C 33:371:::1:18444::::a::25a7641 probability G :::13545377::1368a:::8:2:::444 matrix T 6115:241:1:7213:1:aa:::45:2::4 bits 2.4 * * * 2.2 * * * 1.9 * * * 1.7 * **** * Relative 1.4 * * * ******* * Entropy 1.2 * * * ******** *** (31.4 bits) 1.0 * * *** * ******** **** 0.7 * * *** * ******** ***** 0.5 *** * ******* ******** ***** 0.2 *********************** ****** 0.0 ------------------------------ Multilevel TAATCGGGAGGTCCCGGGTTCGATTCCCCG consensus CC CGATAG AATAGC C GGT sequence T T A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TMAYCDKRAGGTCMBSGGTTCGATYCCSVK MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chrXI:140932-141206 - 7 1.55e-13 CATCACGCTT TCACCGTGGAGACCGGGGTTCGACTCCCCG TATCGG chrVII:328481-328817 + 18 1.55e-13 CATCACGCTT TCACCGTGGAGACCGGGGTTCGACTCCCCG TATCGGAGTT chrIV:1017098-1017430 - 1 1.55e-13 CATCACGTTC TCACCGTGGAGACCGGGGTTCGACTCCCCG chrIV:1201598-1201940 + 66 3.25e-13 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAGCCCCCT ACAGG chrVI:226525-226877 - 45 3.25e-13 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTTA chrVII:185567-185907 - 35 3.25e-13 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTAT chrXVI:860244-860543 + 69 6.54e-13 TCCAACGTTG CCATCGTTGGGCCCCCGGTTCGATTCCGGG CT chrX:531717-531817 + 43 6.54e-13 TCCAACGTTG CCATCGTTGGGCCCCCGGTTCGATTCCGGG CTTGCGCAGT chrVII:845482-845874 + 54 6.54e-13 TCCAACGTTG CCATCGTTGGGCCCCCGGTTCGATTCCGGG CTTGCGCAAT chrXII:734705-734935 + 68 1.12e-12 ACCGTGCTAA TAACGCGGGGATCAGCGGTTCGATCCCGCT AGA chrIV:568756-569144 + 16 8.83e-12 GTCTGACTTC TAATCAGAAGATTATGGGTTCGACCCCCAT CGTGAGTGCT chrX:374300-374400 - 46 8.83e-12 GTCTGACTTC TAATCAGAAGATTATGGGTTCGACCCCCAT CGTGAGTGCT chrXIV:374774-375047 + 62 1.90e-11 TTCGGTCAAG TCATCTGGAGGTCCTGTGTTCGATCCACAG AGTTCGCAA chrVII:779509-779766 + 63 1.90e-11 TCCCACCCTT CCAAGGTGGGGACACGGGTTCGATTCTCGT ACCGCTCA chrXIV:96139-96428 - 16 1.90e-11 TCCCACCCTT CCAAGGTGGGGACACGGGTTCGATTCTCGT ACCGCTCAAA chrXI:578801-579234 + 56 7.79e-11 TTAAGCAAGG ATACCGAAATGTCAGGGGTTCGAGCCCCCT ATGAGGAGTT chrVII:115349-115715 + 64 7.79e-11 TTAAGCAAGG ATACCGAAATGTCAGGGGTTCGAGCCCCCT ATGAGGA chrVIII:237708-238092 - 6 1.03e-10 TTCGGTCAAG TTATCTGGAGGTCCTGTGTTCGATCCACAG AATTC chrIV:434174-434439 - 16 1.03e-10 GCCACACTAG TAATGTGGAGATCATCGGTTCAAATCCGAT TGGAAGCATA chrXIV:104665-105038 + 39 1.03e-10 GCCACACTAG TAATGTGGAGATCATCGGTTCAAATCCGAT TGGAAGCATA chrX:197212-197312 - 9 1.36e-10 GCTCCCTTAG CATGGGAGAGGTCTCCGGTTCGATTCCGGA CTCGTCCA chrXII:656867-657107 - 5 1.36e-10 GCTCCCTTAG CATGGGAGAGGTCTCCGGTTCGATTCCGGA CTCG chrVII:774193-774540 + 68 1.36e-10 GCTCCCTTAG CATGGGAGAGGTCTCCGGTTCGATTCCGGA CTC chrIV:802474-802990 - 57 1.49e-10 CTTTCGGTTT TGATCCGGACAACCCCGGTTCGAATCCGGG TAGGACCTCT chrXV:976341-976653 + 9 3.56e-10 CAGTCTCA TAATCTGAAGGTCGAGAGTTCGAACCTCCC CTGGAGCAAA chrX:422803-422903 + 64 3.56e-10 GTCAGTCTCA TAATCTGAAGGTCGAGAGTTCGAACCTCCC CTGGAGC chrVII:823349-823654 + 67 1.01e-09 ATCTGCTTAA CACGCAGAACGTCCCCAGTTCGATCCTGGG CGAA chrV:99993-100309 + 66 2.59e-09 GCAGGGCTCA TAACCCTGATGTCCTCGGATCGAAACCGAG CGGCG chrVI:137329-137670 - 45 7.35e-09 GTGCGACTGT TAATCGCAAGATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrIV:619866-620137 - 26 1.49e-08 GTCTGGCTAC GAACCAGAAGATTCCAGGTTCAAGTCCTGG CGGGGAAGAT chrX:204638-204738 + 43 1.97e-08 TGGGCGCTTG TCGCGTGCCAGATCGGGGTTCAATTCCCCG TCGCGGAGAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TMAYCDKRAGGTCMBSGGTTCGATYCCSVK MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXI:140932-141206 1.6e-13 6_[-2]_64 chrVII:328481-328817 1.6e-13 17_[+2]_53 chrIV:1017098-1017430 1.6e-13 [-2]_70 chrIV:1201598-1201940 3.2e-13 65_[+2]_5 chrVI:226525-226877 3.2e-13 44_[-2]_26 chrVII:185567-185907 3.2e-13 34_[-2]_36 chrXVI:860244-860543 6.5e-13 68_[+2]_2 chrX:531717-531817 6.5e-13 42_[+2]_28 chrVII:845482-845874 6.5e-13 53_[+2]_17 chrXII:734705-734935 1.1e-12 67_[+2]_3 chrIV:568756-569144 8.8e-12 15_[+2]_55 chrX:374300-374400 8.8e-12 45_[-2]_25 chrXIV:374774-375047 1.9e-11 61_[+2]_9 chrVII:779509-779766 1.9e-11 62_[+2]_8 chrXIV:96139-96428 1.9e-11 15_[-2]_55 chrXI:578801-579234 7.8e-11 55_[+2]_15 chrVII:115349-115715 7.8e-11 63_[+2]_7 chrVIII:237708-238092 1e-10 5_[-2]_65 chrIV:434174-434439 1e-10 15_[-2]_55 chrXIV:104665-105038 1e-10 38_[+2]_32 chrX:197212-197312 1.4e-10 8_[-2]_62 chrXII:656867-657107 1.4e-10 4_[-2]_66 chrVII:774193-774540 1.4e-10 67_[+2]_3 chrIV:802474-802990 1.5e-10 56_[-2]_14 chrXV:976341-976653 3.6e-10 8_[+2]_62 chrX:422803-422903 3.6e-10 63_[+2]_7 chrVII:823349-823654 1e-09 66_[+2]_4 chrV:99993-100309 2.6e-09 65_[+2]_5 chrVI:137329-137670 7.3e-09 44_[-2]_26 chrIV:619866-620137 1.5e-08 25_[-2]_45 chrX:204638-204738 2e-08 42_[+2]_28 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TMAYCDKRAGGTCMBSGGTTCGATYCCSVK MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TMAYCDKRAGGTCMBSGGTTCGATYCCSVK width=30 seqs=31 chrXI:140932-141206 ( 7) TCACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrVII:328481-328817 ( 18) TCACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrIV:1017098-1017430 ( 1) TCACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrIV:1201598-1201940 ( 66) TAATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrVI:226525-226877 ( 45) TAATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrVII:185567-185907 ( 35) TAATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrXVI:860244-860543 ( 69) CCATCGTTGGGCCCCCGGTTCGATTCCGGG 1 chrX:531717-531817 ( 43) CCATCGTTGGGCCCCCGGTTCGATTCCGGG 1 chrVII:845482-845874 ( 54) CCATCGTTGGGCCCCCGGTTCGATTCCGGG 1 chrXII:734705-734935 ( 68) TAACGCGGGGATCAGCGGTTCGATCCCGCT 1 chrIV:568756-569144 ( 16) TAATCAGAAGATTATGGGTTCGACCCCCAT 1 chrX:374300-374400 ( 46) TAATCAGAAGATTATGGGTTCGACCCCCAT 1 chrXIV:374774-375047 ( 62) TCATCTGGAGGTCCTGTGTTCGATCCACAG 1 chrVII:779509-779766 ( 63) CCAAGGTGGGGACACGGGTTCGATTCTCGT 1 chrXIV:96139-96428 ( 16) CCAAGGTGGGGACACGGGTTCGATTCTCGT 1 chrXI:578801-579234 ( 56) ATACCGAAATGTCAGGGGTTCGAGCCCCCT 1 chrVII:115349-115715 ( 64) ATACCGAAATGTCAGGGGTTCGAGCCCCCT 1 chrVIII:237708-238092 ( 6) TTATCTGGAGGTCCTGTGTTCGATCCACAG 1 chrIV:434174-434439 ( 16) TAATGTGGAGATCATCGGTTCAAATCCGAT 1 chrXIV:104665-105038 ( 39) TAATGTGGAGATCATCGGTTCAAATCCGAT 1 chrX:197212-197312 ( 9) CATGGGAGAGGTCTCCGGTTCGATTCCGGA 1 chrXII:656867-657107 ( 5) CATGGGAGAGGTCTCCGGTTCGATTCCGGA 1 chrVII:774193-774540 ( 68) CATGGGAGAGGTCTCCGGTTCGATTCCGGA 1 chrIV:802474-802990 ( 57) TGATCCGGACAACCCCGGTTCGAATCCGGG 1 chrXV:976341-976653 ( 9) TAATCTGAAGGTCGAGAGTTCGAACCTCCC 1 chrX:422803-422903 ( 64) TAATCTGAAGGTCGAGAGTTCGAACCTCCC 1 chrVII:823349-823654 ( 67) CACGCAGAACGTCCCCAGTTCGATCCTGGG 1 chrV:99993-100309 ( 66) TAACCCTGATGTCCTCGGATCGAAACCGAG 1 chrVI:137329-137670 ( 45) TAATCGCAAGATCGTGAGTTCAACCCTCAC 1 chrIV:619866-620137 ( 26) GAACCAGAAGATTCCAGGTTCAAGTCCTGG 1 chrX:204638-204738 ( 43) TCGCGTGCCAGATCGGGGTTCAATTCCCCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TMAYCDKRAGGTCMBSGGTTCGATYCCSVK MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 40044 bayes= 10.2972 E= 1.2e-106 -226 61 -256 99 83 76 -256 -168 144 -256 -256 -168 -226 61 -56 74 -1160 190 61 -1160 -45 -98 125 -45 -94 -256 114 32 32 -256 134 -168 113 -256 61 -1160 -126 -156 190 -168 -26 -1160 196 -1160 -45 -98 -1160 113 -1160 202 -1160 -45 32 114 -98 -168 -226 90 76 -26 -326 102 161 -1160 -126 -1160 208 -226 -1160 -1160 239 -1160 -326 -1160 -1160 164 -1160 -1160 -1160 169 -1160 239 -1160 -1160 -94 -1160 214 -1160 169 -1160 -1160 -1160 -68 2 2 44 -326 125 -1160 74 -1160 239 -1160 -1160 -226 196 -1160 -68 -1160 161 102 -326 -26 102 90 -1160 -168 -98 114 32 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TMAYCDKRAGGTCMBSGGTTCGATYCCSVK MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 31 E= 1.2e-106 0.064516 0.290323 0.032258 0.612903 0.548387 0.322581 0.032258 0.096774 0.838710 0.032258 0.032258 0.096774 0.064516 0.290323 0.129032 0.516129 0.000000 0.709677 0.290323 0.000000 0.225806 0.096774 0.451613 0.225806 0.161290 0.032258 0.419355 0.387097 0.387097 0.032258 0.483871 0.096774 0.677419 0.032258 0.290323 0.000000 0.129032 0.064516 0.709677 0.096774 0.258065 0.000000 0.741935 0.000000 0.225806 0.096774 0.000000 0.677419 0.000000 0.774194 0.000000 0.225806 0.387097 0.419355 0.096774 0.096774 0.064516 0.354839 0.322581 0.258065 0.032258 0.387097 0.580645 0.000000 0.129032 0.000000 0.806452 0.064516 0.000000 0.000000 1.000000 0.000000 0.032258 0.000000 0.000000 0.967742 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.161290 0.000000 0.838710 0.000000 1.000000 0.000000 0.000000 0.000000 0.193548 0.193548 0.193548 0.419355 0.032258 0.451613 0.000000 0.516129 0.000000 1.000000 0.000000 0.000000 0.064516 0.741935 0.000000 0.193548 0.000000 0.580645 0.387097 0.032258 0.258065 0.387097 0.354839 0.000000 0.096774 0.096774 0.419355 0.387097 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TMAYCDKRAGGTCMBSGGTTCGATYCCSVK MEME-2 regular expression -------------------------------------------------------------------------------- [TC][AC]A[TC][CG][GAT][GT][GA][AG]G[GA][TA][CT][CA][CGT][GC]GGTTCGAT[TC]CC[CG][CGA][GT] -------------------------------------------------------------------------------- Time 605.77 secs. ******************************************************************************** ******************************************************************************** MOTIF RAARAAAAAARAAAA MEME-3 width = 15 sites = 80 llr = 854 E-value = 1.7e-050 ******************************************************************************** -------------------------------------------------------------------------------- Motif RAARAAAAAARAAAA MEME-3 Description -------------------------------------------------------------------------------- Simplified A 6986888a7869997 pos.-specific C ::2:::::::::::: probability G 3::4212:3131::1 matrix T 11:::1:::21:112 bits 2.4 2.2 1.9 1.7 * Relative 1.4 * * Entropy 1.2 ** * ** *** (15.4 bits) 1.0 ******* *** 0.7 ************** 0.5 *************** 0.2 *************** 0.0 --------------- Multilevel AAAAAAAAAAAAAAA consensus G GG G G G T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAARAAAAAARAAAA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chrVII:598896-599136 + 30 1.44e-08 TGCCACAGAA AAAGAAAAAAAAAAA AGAAACGGCG chrXII:704347-704585 - 36 1.44e-08 ATGGAGGAGA AAAGAAAAAAAAAAA TGAAAAAAAA chrIII:228752-229139 - 70 8.96e-08 TCTTTGTTCC GAAAAAAAAAAAAAA CGGAAAAATA chrV:152517-153033 - 77 8.96e-08 GAAAGAAAT GAAGAAAAAAGAAAA TGAATTAAAA chrXIV:88947-89740 - 26 8.96e-08 TGTGAGAAAA AAAAAAAAAAGAAAA TAAAGGAAAA chrVIII:396871-397073 + 23 8.96e-08 ATCGCTTCGC GAAAAAAAAAAAAAA AAAAATTTAA chrX:663711-663811 - 37 8.96e-08 AACATAACTA AAAAAAAAAAGAAAA AAAATATAGT chrIX:380556-380805 - 4 1.32e-07 TTTTATTTCA AAAAAAAAGAAAAAA GGG chrVIII:222599-222906 - 33 1.68e-07 CAACAACAAT AAAGGAAAAAAAAAA CAAAGAAATT chrII:680581-680710 + 67 1.68e-07 ATGCGAAGTC AAAGGAAAAAAAAAA TAAAAAAATA chrXVI:188635-188956 - 86 2.57e-07 . AACGAAAAAAAAAAA ATCGTAAGTA chrII:143639-144155 + 14 2.57e-07 AGACAACATG AACGAAAAAAAAAAA ACAGTGTAGA chrXI:612144-612660 + 13 3.22e-07 TAGCTGCGAA GAAAGAAAAAGAAAA TATTCACCTC chrII:193590-193793 + 71 3.95e-07 GCTGTTAATT GAAGAAAAAAAAAAT GAAGAACCAC chrV:225431-225740 + 17 3.95e-07 TCTTTTTCCA GAAAAAGAAAGAAAA AAGCCGGCGG chrXVI:98594-99110 + 57 7.67e-07 GGCGTTCTAG AAAAAAAAGAAAAAT TCAAAAATTT chrXIII:159452-159968 - 54 7.67e-07 TGGGAAATGG AAAGAGAAAAGAAAA GAGTATGAAA chrXIII:652054-652975 - 69 7.67e-07 ACTAGCAATT GAAAAAAAAAAAAAG GTATGTGCGT chrVII:771944-772234 - 15 8.32e-07 CGGTGCGAAA GAAAAAAAGAAAAAT ACGGCTGAAA chrVIII:282412-282590 - 26 8.94e-07 GATTTAAAAT GAAAAAAAGAGAAAT TCAGTAATAC chrXV:1004267-1004783 - 11 9.93e-07 GCCAAGCGAG AACAGAAAAAAAAAA TGAAGTAAAA chrXI:428643-428875 + 71 9.93e-07 AATAAATAAA TAAGAAAAAAAAAAA GCAAGTAAAT chrIV:541254-541896 + 36 1.15e-06 ACAATAAGAA TAAGAAAAAAGAAAA TCAGCAAGAA chrIV:541254-541893 + 38 1.15e-06 ACAATAAGAA TAAGAAAAAAGAAAA TCAGCAAGAA chrXI:459161-459677 - 77 1.33e-06 ATAGAGTTT AAAAGAAAAAGAAAT ATGGGGAATA chrXV:1004125-1004440 - 27 1.33e-06 CAAAAAAAAT ATAAAAAAAAAAAAA CACCCTTGCA chrXIII:163168-163620 + 44 1.98e-06 CCCAGCCAGA AAAGAAAAAAAATAA CAGTATTTAC chrIX:255693-256116 - 14 2.92e-06 GTTTTATCAA AAAAATAAAAGAAAA TTACCATTTC chrXVI:878964-879480 + 43 2.92e-06 GTTTAATTCT GAAGAGAAAAAAAAT GATAAATTTA chrXI:282974-283633 + 35 3.18e-06 TATGTTTCTT AAAGAAAAATGAAAG TCAAAATAAC chrIV:117849-118304 - 10 3.18e-06 TATCCCTCGT AACAGAGAAAAAAAA CCAATAACT chrII:604558-605195 - 81 3.53e-06 TAAAA AAAAAAAAGTAAAAT TGGATTCTTG chrII:681143-681926 + 44 3.53e-06 ACAGAAAGCT AAAAAAAAGAAAATA GAAAACAACC chrX:531717-531817 - 82 3.88e-06 CAGA AAAAAAGAAAAGAAA CTGCGCAAGC chrXIV:215691-216207 - 25 4.21e-06 TATAATAAAT AAAAGAGAATAAAAA GTTTAATCAC chrVI:226525-226877 + 23 4.21e-06 TTTTGTTAGA GAAAAAAAGAGATAA GCCCTGTAGG chrXII:951646-951844 + 52 4.60e-06 TATGACCACA GAAGAAAAGACAAAA TTGTCGCCTG chrVII:806241-806472 + 62 5.12e-06 GTAATTAACG TAAAAAGAGAAAAAA TTGAAATTGA chrXV:965831-966347 + 10 5.12e-06 GGTCAGAAG AAAAGAGAGAAAAAT GCAAAATGGG chrIV:1489078-1489869 - 10 5.12e-06 AGGGACCAAA GAAGGAAAAAAAATA TGTTGGAAG chrXVI:282527-282784 - 42 5.12e-06 CGTACACTAA AAAAAAAAAAGGAAT AAAATCCCAA chrIV:1441397-1441913 - 86 5.77e-06 . AACAAAGAAAAAAAG GTCATACCAT chrXIII:669538-670054 - 25 5.77e-06 TTTATATTAA AACAAAAACAAAAAA GTCTGGGAGC chrXVI:654298-654814 - 42 5.77e-06 CCCTGTATTC AAAAAAGAAAAAATA TCAAAATATG chrXIII:626289-626921 - 52 5.77e-06 CCAATTTTGT AACGAAAAATAAAAT ACAAATCGGG chrXII:1029773-1030098 - 86 5.77e-06 . TAAGAGAAAAAAAAA ATTATAGATA chrXII:242512-242745 - 85 6.47e-06 A AAAAAAGAGAGGAAA GATAAATTAT chrIV:652699-653215 - 50 7.14e-06 TAAGATATAT ATAAAAAAAAGAAAG TGGGAAAAAC chrXIII:702617-702747 + 58 7.14e-06 CACTGACCCA GAAAAGAAGAGAAAG ATTATTGGTA chrVII:1050099-1050615 + 10 7.83e-06 GAGAGGCTA AACGAAAAGGGAAAA GAGGTGCGTT chrXII:439933-440236 + 81 7.83e-06 TTAGAAAGAT AAAGGAAAGTGAAAT TATTG chrXIII:408446-408798 + 20 8.63e-06 ACGCGCGATA AAAAAAAAATTAAAA GTAAAACTAC chrII:234966-235482 - 53 9.52e-06 TACTATTAAT AAAGAAAATAAAAAA CGTATCAAGT chrXIII:759501-760017 - 44 9.52e-06 AATAGTGAAG AACAGAGAAAAAAAT GATGTGTTAC chrXIII:297007-298854 - 1 1.04e-05 ATAATTATAC GAAAATGAGAAAAAA chrXV:384605-385121 - 76 1.04e-05 CAGCCCAACC GAAAAAAAGGGAAAT TAACTTTACA chrIV:892324-892840 + 52 1.20e-05 GAATTTTCTA GAAGAAAAAACAAAG AAGCCTCGCA chrXVI:193980-194583 - 42 1.30e-05 TTGGTAACGG AACGAAAAATAGAAA AGGATATTAC chrIV:1302145-1302387 - 5 1.42e-05 AATTTGCTGC AACAGTAAAAAAAAA GAAT chrIII:224830-225346 - 48 1.42e-05 AGATATGTAT TTAGAAAAGAGAAAA ACCAAGGGTG chrXIII:550097-550276 - 68 1.42e-05 CTGAAGCTGA AAAGAAGAAATAAAT TAAATGAATC chrV:85662-86809 - 72 1.55e-05 GCTTTAGGAG AACGAAAAAAAAATT GCAAAGAAAA chrX:123443-123543 + 11 1.55e-05 AACAACGCCA AACGAAAAAAAATAT ATAGTGCATA chrXVI:641279-641542 + 55 1.82e-05 GGATGATGCG AAAGGGAAAATAAAA TCTCGCAATC chrII:478900-479317 - 75 1.82e-05 CCCCTATATG AAAAGAAAATGATAA GCAGATAGAT chrXV:254539-254856 - 45 1.82e-05 TATGGTCGCC GTAAAAAAGAGGAAA GGGTTTATTT chrXVI:461527-462043 + 40 1.99e-05 ATTTCTTGGT GAAGGGAAAATAAAA TGTGTTTTCC chrIV:1161479-1161995 - 4 1.99e-05 TTAAACGCTG GAAAAAAAGGAGAAA TTA chrV:250256-250494 - 33 1.99e-05 TATATTATGT AAAAATGAATAAAAA AGGTCCTACC chrXVI:74990-75257 - 19 2.18e-05 GAAGCCGTTA GAAGAAAACAGAATA AACACACGTG chrIV:200425-200941 + 40 2.35e-05 CTGGTGGTCC GACAAGAAAGGAAAA AGCAAAGATT chrXVI:272058-272574 - 25 2.35e-05 AAACTTGGTA GAAAGAGAGTAAAAG TTTTCTTGCA chrIV:1492474-1492990 + 18 2.35e-05 CATATTAAAT GTAGAGGAGAGAAAA TTAAATTACA chrVII:609644-610007 + 78 2.50e-05 TCCGCGTCGT ATAGGAAACAAAAAA GTGTAAAA chrVIII:384746-385071 + 86 2.88e-05 AATGTATTCT GAAAAAAAAAAAGAG chrII:605271-605661 + 81 3.77e-05 AGAAGCCGAA GACGAAGAATAAATA ATTCG chrXIV:628733-628958 - 18 4.07e-05 ACATTAATAT ATAAAAAAATAATAA AAAAATGTAT chrVII:858727-859243 + 38 4.07e-05 ACCAGCCAAA ATAAAAAAATAATAA ATAAGACGAG chrXII:930741-931226 + 80 4.37e-05 TAATATAACC TAAAAGAAATAAAAT GCTTAT chrII:407783-408299 + 49 4.37e-05 AGAACAAAAT ATAAATAAATAAAAA AAACTTCTCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAARAAAAAARAAAA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrVII:598896-599136 1.4e-08 29_[+3]_56 chrXII:704347-704585 1.4e-08 35_[-3]_50 chrIII:228752-229139 9e-08 69_[-3]_16 chrV:152517-153033 9e-08 76_[-3]_9 chrXIV:88947-89740 9e-08 25_[-3]_60 chrVIII:396871-397073 9e-08 22_[+3]_63 chrX:663711-663811 9e-08 36_[-3]_49 chrIX:380556-380805 1.3e-07 3_[-3]_82 chrVIII:222599-222906 1.7e-07 32_[-3]_53 chrII:680581-680710 1.7e-07 66_[+3]_19 chrXVI:188635-188956 2.6e-07 85_[-3] chrII:143639-144155 2.6e-07 13_[+3]_72 chrXI:612144-612660 3.2e-07 12_[+3]_73 chrII:193590-193793 4e-07 70_[+3]_15 chrV:225431-225740 4e-07 16_[+3]_69 chrXVI:98594-99110 7.7e-07 56_[+3]_29 chrXIII:159452-159968 7.7e-07 53_[-3]_32 chrXIII:652054-652975 7.7e-07 68_[-3]_17 chrVII:771944-772234 8.3e-07 14_[-3]_71 chrVIII:282412-282590 8.9e-07 25_[-3]_60 chrXV:1004267-1004783 9.9e-07 10_[-3]_75 chrXI:428643-428875 9.9e-07 70_[+3]_15 chrIV:541254-541896 1.1e-06 35_[+3]_50 chrIV:541254-541893 1.1e-06 37_[+3]_48 chrXI:459161-459677 1.3e-06 76_[-3]_9 chrXV:1004125-1004440 1.3e-06 26_[-3]_59 chrXIII:163168-163620 2e-06 43_[+3]_42 chrIX:255693-256116 2.9e-06 13_[-3]_72 chrXVI:878964-879480 2.9e-06 42_[+3]_43 chrXI:282974-283633 3.2e-06 34_[+3]_51 chrIV:117849-118304 3.2e-06 9_[-3]_76 chrII:604558-605195 3.5e-06 80_[-3]_5 chrII:681143-681926 3.5e-06 43_[+3]_42 chrX:531717-531817 3.9e-06 81_[-3]_4 chrXIV:215691-216207 4.2e-06 24_[-3]_61 chrVI:226525-226877 4.2e-06 22_[+3]_63 chrXII:951646-951844 4.6e-06 51_[+3]_34 chrVII:806241-806472 5.1e-06 61_[+3]_24 chrXV:965831-966347 5.1e-06 9_[+3]_76 chrIV:1489078-1489869 5.1e-06 9_[-3]_76 chrXVI:282527-282784 5.1e-06 41_[-3]_44 chrIV:1441397-1441913 5.8e-06 85_[-3] chrXIII:669538-670054 5.8e-06 24_[-3]_61 chrXVI:654298-654814 5.8e-06 41_[-3]_44 chrXIII:626289-626921 5.8e-06 51_[-3]_34 chrXII:1029773-1030098 5.8e-06 85_[-3] chrXII:242512-242745 6.5e-06 84_[-3]_1 chrIV:652699-653215 7.1e-06 49_[-3]_36 chrXIII:702617-702747 7.1e-06 57_[+3]_28 chrVII:1050099-1050615 7.8e-06 9_[+3]_76 chrXII:439933-440236 7.8e-06 80_[+3]_5 chrXIII:408446-408798 8.6e-06 19_[+3]_66 chrII:234966-235482 9.5e-06 52_[-3]_33 chrXIII:759501-760017 9.5e-06 43_[-3]_42 chrXIII:297007-298854 1e-05 [-3]_85 chrXV:384605-385121 1e-05 75_[-3]_10 chrIV:892324-892840 1.2e-05 51_[+3]_34 chrXVI:193980-194583 1.3e-05 41_[-3]_44 chrIV:1302145-1302387 1.4e-05 4_[-3]_81 chrIII:224830-225346 1.4e-05 47_[-3]_38 chrXIII:550097-550276 1.4e-05 67_[-3]_18 chrV:85662-86809 1.6e-05 71_[-3]_14 chrX:123443-123543 1.6e-05 10_[+3]_75 chrXVI:641279-641542 1.8e-05 54_[+3]_31 chrII:478900-479317 1.8e-05 74_[-3]_11 chrXV:254539-254856 1.8e-05 44_[-3]_41 chrXVI:461527-462043 2e-05 39_[+3]_46 chrIV:1161479-1161995 2e-05 3_[-3]_82 chrV:250256-250494 2e-05 32_[-3]_53 chrXVI:74990-75257 2.2e-05 18_[-3]_67 chrIV:200425-200941 2.3e-05 39_[+3]_46 chrXVI:272058-272574 2.3e-05 24_[-3]_61 chrIV:1492474-1492990 2.3e-05 17_[+3]_68 chrVII:609644-610007 2.5e-05 77_[+3]_8 chrVIII:384746-385071 2.9e-05 85_[+3] chrII:605271-605661 3.8e-05 80_[+3]_5 chrXIV:628733-628958 4.1e-05 17_[-3]_68 chrVII:858727-859243 4.1e-05 37_[+3]_48 chrXII:930741-931226 4.4e-05 79_[+3]_6 chrII:407783-408299 4.4e-05 48_[+3]_37 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAARAAAAAARAAAA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RAARAAAAAARAAAA width=15 seqs=80 chrVII:598896-599136 ( 30) AAAGAAAAAAAAAAA 1 chrXII:704347-704585 ( 36) AAAGAAAAAAAAAAA 1 chrIII:228752-229139 ( 70) GAAAAAAAAAAAAAA 1 chrV:152517-153033 ( 77) GAAGAAAAAAGAAAA 1 chrXIV:88947-89740 ( 26) AAAAAAAAAAGAAAA 1 chrVIII:396871-397073 ( 23) GAAAAAAAAAAAAAA 1 chrX:663711-663811 ( 37) AAAAAAAAAAGAAAA 1 chrIX:380556-380805 ( 4) AAAAAAAAGAAAAAA 1 chrVIII:222599-222906 ( 33) AAAGGAAAAAAAAAA 1 chrII:680581-680710 ( 67) AAAGGAAAAAAAAAA 1 chrXVI:188635-188956 ( 86) AACGAAAAAAAAAAA 1 chrII:143639-144155 ( 14) AACGAAAAAAAAAAA 1 chrXI:612144-612660 ( 13) GAAAGAAAAAGAAAA 1 chrII:193590-193793 ( 71) GAAGAAAAAAAAAAT 1 chrV:225431-225740 ( 17) GAAAAAGAAAGAAAA 1 chrXVI:98594-99110 ( 57) AAAAAAAAGAAAAAT 1 chrXIII:159452-159968 ( 54) AAAGAGAAAAGAAAA 1 chrXIII:652054-652975 ( 69) GAAAAAAAAAAAAAG 1 chrVII:771944-772234 ( 15) GAAAAAAAGAAAAAT 1 chrVIII:282412-282590 ( 26) GAAAAAAAGAGAAAT 1 chrXV:1004267-1004783 ( 11) AACAGAAAAAAAAAA 1 chrXI:428643-428875 ( 71) TAAGAAAAAAAAAAA 1 chrIV:541254-541896 ( 36) TAAGAAAAAAGAAAA 1 chrIV:541254-541893 ( 38) TAAGAAAAAAGAAAA 1 chrXI:459161-459677 ( 77) AAAAGAAAAAGAAAT 1 chrXV:1004125-1004440 ( 27) ATAAAAAAAAAAAAA 1 chrXIII:163168-163620 ( 44) AAAGAAAAAAAATAA 1 chrIX:255693-256116 ( 14) AAAAATAAAAGAAAA 1 chrXVI:878964-879480 ( 43) GAAGAGAAAAAAAAT 1 chrXI:282974-283633 ( 35) AAAGAAAAATGAAAG 1 chrIV:117849-118304 ( 10) AACAGAGAAAAAAAA 1 chrII:604558-605195 ( 81) AAAAAAAAGTAAAAT 1 chrII:681143-681926 ( 44) AAAAAAAAGAAAATA 1 chrX:531717-531817 ( 82) AAAAAAGAAAAGAAA 1 chrXIV:215691-216207 ( 25) AAAAGAGAATAAAAA 1 chrVI:226525-226877 ( 23) GAAAAAAAGAGATAA 1 chrXII:951646-951844 ( 52) GAAGAAAAGACAAAA 1 chrVII:806241-806472 ( 62) TAAAAAGAGAAAAAA 1 chrXV:965831-966347 ( 10) AAAAGAGAGAAAAAT 1 chrIV:1489078-1489869 ( 10) GAAGGAAAAAAAATA 1 chrXVI:282527-282784 ( 42) AAAAAAAAAAGGAAT 1 chrIV:1441397-1441913 ( 86) AACAAAGAAAAAAAG 1 chrXIII:669538-670054 ( 25) AACAAAAACAAAAAA 1 chrXVI:654298-654814 ( 42) AAAAAAGAAAAAATA 1 chrXIII:626289-626921 ( 52) AACGAAAAATAAAAT 1 chrXII:1029773-1030098 ( 86) TAAGAGAAAAAAAAA 1 chrXII:242512-242745 ( 85) AAAAAAGAGAGGAAA 1 chrIV:652699-653215 ( 50) ATAAAAAAAAGAAAG 1 chrXIII:702617-702747 ( 58) GAAAAGAAGAGAAAG 1 chrVII:1050099-1050615 ( 10) AACGAAAAGGGAAAA 1 chrXII:439933-440236 ( 81) AAAGGAAAGTGAAAT 1 chrXIII:408446-408798 ( 20) AAAAAAAAATTAAAA 1 chrII:234966-235482 ( 53) AAAGAAAATAAAAAA 1 chrXIII:759501-760017 ( 44) AACAGAGAAAAAAAT 1 chrXIII:297007-298854 ( 1) GAAAATGAGAAAAAA 1 chrXV:384605-385121 ( 76) GAAAAAAAGGGAAAT 1 chrIV:892324-892840 ( 52) GAAGAAAAAACAAAG 1 chrXVI:193980-194583 ( 42) AACGAAAAATAGAAA 1 chrIV:1302145-1302387 ( 5) AACAGTAAAAAAAAA 1 chrIII:224830-225346 ( 48) TTAGAAAAGAGAAAA 1 chrXIII:550097-550276 ( 68) AAAGAAGAAATAAAT 1 chrV:85662-86809 ( 72) AACGAAAAAAAAATT 1 chrX:123443-123543 ( 11) AACGAAAAAAAATAT 1 chrXVI:641279-641542 ( 55) AAAGGGAAAATAAAA 1 chrII:478900-479317 ( 75) AAAAGAAAATGATAA 1 chrXV:254539-254856 ( 45) GTAAAAAAGAGGAAA 1 chrXVI:461527-462043 ( 40) GAAGGGAAAATAAAA 1 chrIV:1161479-1161995 ( 4) GAAAAAAAGGAGAAA 1 chrV:250256-250494 ( 33) AAAAATGAATAAAAA 1 chrXVI:74990-75257 ( 19) GAAGAAAACAGAATA 1 chrIV:200425-200941 ( 40) GACAAGAAAGGAAAA 1 chrXVI:272058-272574 ( 25) GAAAGAGAGTAAAAG 1 chrIV:1492474-1492990 ( 18) GTAGAGGAGAGAAAA 1 chrVII:609644-610007 ( 78) ATAGGAAACAAAAAA 1 chrVIII:384746-385071 ( 86) GAAAAAAAAAAAGAG 1 chrII:605271-605661 ( 81) GACGAAGAATAAATA 1 chrXIV:628733-628958 ( 18) ATAAAAAAATAATAA 1 chrVII:858727-859243 ( 38) ATAAAAAAATAATAA 1 chrXII:930741-931226 ( 80) TAAAAGAAATAAAAT 1 chrII:407783-408299 ( 49) ATAAATAAATAAAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAARAAAAAARAAAA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 48504 bayes= 10.717 E= 1.7e-050 92 -1297 77 -182 152 -1297 -1297 -146 139 -2 -1297 -1297 89 -1297 116 -1297 135 -1297 16 -1297 141 -1297 -76 -231 137 -1297 7 -1297 169 -1297 -1297 -1297 115 -234 46 -463 130 -1297 -193 -72 95 -293 77 -263 158 -1297 -134 -1297 156 -1297 -393 -204 158 -1297 -1297 -204 115 -1297 -93 -54 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAARAAAAAARAAAA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 80 E= 1.7e-050 0.587500 0.000000 0.325000 0.087500 0.887500 0.000000 0.000000 0.112500 0.812500 0.187500 0.000000 0.000000 0.575000 0.000000 0.425000 0.000000 0.787500 0.000000 0.212500 0.000000 0.825000 0.000000 0.112500 0.062500 0.800000 0.000000 0.200000 0.000000 1.000000 0.000000 0.000000 0.000000 0.687500 0.037500 0.262500 0.012500 0.762500 0.000000 0.050000 0.187500 0.600000 0.025000 0.325000 0.050000 0.925000 0.000000 0.075000 0.000000 0.912500 0.000000 0.012500 0.075000 0.925000 0.000000 0.000000 0.075000 0.687500 0.000000 0.100000 0.212500 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAARAAAAAARAAAA MEME-3 regular expression -------------------------------------------------------------------------------- [AG]AA[AG][AG]A[AG]A[AG]A[AG]AAA[AT] -------------------------------------------------------------------------------- Time 888.28 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIX:177641-177980 9.20e-01 100 chrXVI:303300-304169 6.73e-01 100 chrIV:1442556-1443072 5.79e-02 100 chrXVI:377790-378306 1.79e-01 100 chrV:122617-122764 4.22e-01 100 chrVII:914834-915216 3.43e-01 100 chrVIII:75646-75978 2.65e-02 100 chrVII:970713-971229 4.85e-01 100 chrII:167092-167608 8.73e-02 100 chrIV:117849-118304 1.66e-02 9_[-3(3.18e-06)]_76 chrXV:980599-980853 4.84e-02 100 chrXII:1029773-1030098 2.10e-02 85_[-3(5.77e-06)] chrVII:544469-544827 2.40e-01 100 chrXIII:652054-652975 5.92e-03 68_[-3(7.67e-07)]_17 chrXIII:887099-888089 2.15e-02 100 chrXIV:65213-65520 7.61e-01 100 chrXII:201730-202405 9.24e-01 100 chrXV:254539-254856 9.16e-03 44_[-3(1.82e-05)]_41 chrXV:522964-523480 9.57e-01 100 chrX:663711-663811 8.79e-04 36_[-3(8.96e-08)]_49 chrXIV:415644-415953 4.11e-01 100 chrVI:137329-137670 5.15e-05 44_[-2(7.35e-09)]_26 chrXVI:404786-405824 5.09e-01 100 chrXVI:376985-377501 3.43e-01 100 chrIV:1265017-1265533 1.56e-01 100 chrII:227056-227229 5.03e-02 100 chrXIII:626289-626921 4.68e-03 51_[-3(5.77e-06)]_34 chrXII:781027-781543 2.27e-01 100 chrXIII:551459-551701 9.82e-01 100 chrII:407783-408299 9.40e-02 48_[+3(4.37e-05)]_37 chrII:548125-548641 2.30e-01 100 chrVII:823349-823654 9.91e-10 36_[+1(1.12e-07)]_10_[+2(1.01e-09)]_\ 4 chrXVI:878964-879480 9.21e-04 42_[+3(2.92e-06)]_43 chrXIII:631936-632307 5.51e-01 100 chrXII:797021-797354 5.93e-01 100 chrVIII:451547-452430 4.53e-01 100 chrIV:1017098-1017430 5.52e-09 [-2(1.55e-13)]_70 chrXVI:282527-282784 8.71e-03 41_[-3(5.12e-06)]_44 chrXIII:372415-372623 5.05e-04 23_[-1(1.12e-07)]_57 chrXIII:533062-533578 2.18e-02 100 chrV:78158-78991 8.88e-01 100 chrXIII:759386-759515 5.26e-01 100 chrXII:368176-368438 1.24e-01 100 chrXV:908672-908873 3.68e-01 100 chrXIII:123474-123990 5.24e-02 100 chrII:564008-564524 5.52e-01 100 chrXVI:310399-310915 9.98e-01 100 chrXV:605486-606002 7.71e-01 100 chrIV:974359-974603 3.14e-01 100 chrXII:569056-569572 1.16e-01 100 chrXIII:634294-634810 7.17e-01 100 chrIV:1233663-1234120 7.50e-01 100 chrXII:253948-254464 6.24e-01 100 chrIV:626485-627001 1.40e-01 55_[-3(8.45e-05)]_30 chrXV:779919-781039 5.52e-01 100 chrXII:737630-738146 2.95e-02 5_[-1(2.58e-05)]_75 chrVII:437355-437638 4.26e-01 100 chrI:71792-72954 3.13e-02 100 chrXII:262268-262784 6.59e-01 100 chrII:86492-86808 1.45e-01 100 chrVIII:504959-505475 8.11e-01 100 chrXIII:163577-164295 3.79e-01 100 chrVII:364003-364519 1.85e-01 100 chrXII:243047-243563 3.26e-01 100 chrXI:432084-432513 5.38e-01 100 chrXII:628239-628615 8.72e-04 11_[+1(1.22e-07)]_69 chrII:592316-592467 6.18e-01 100 chrXIII:550097-550276 3.25e-02 67_[-3(1.42e-05)]_18 chrXV:384605-385121 3.46e-02 75_[-3(1.04e-05)]_10 chrXV:622108-622402 1.73e-01 100 chrI:72916-73400 2.50e-02 48_[-1(1.27e-05)]_32 chrXI:282974-283633 1.49e-02 34_[+3(3.18e-06)]_51 chrXIV:661227-661743 6.67e-01 100 chrVIII:121383-121580 2.99e-01 100 chrVII:427242-427758 7.47e-01 100 chrIV:1489078-1489869 1.55e-02 9_[-3(5.12e-06)]_76 chrII:681143-681926 1.98e-02 43_[+3(3.53e-06)]_42 chrX:517766-517866 1.00e-01 100 chrXVI:193980-194583 5.15e-02 41_[-3(1.30e-05)]_44 chrXIII:159452-159968 3.21e-03 53_[-3(7.67e-07)]_32 chrVII:310897-312232 5.83e-01 100 chrXI:612144-612660 2.65e-03 12_[+3(3.22e-07)]_25_[+3(1.42e-05)]_\ 33 chrXIII:552743-553228 9.76e-01 100 chrXIV:216529-217045 3.21e-01 100 chrIV:720692-721163 4.52e-01 100 chrXII:80527-81043 8.06e-01 100 chrXV:882712-883228 4.90e-01 100 chrVII:556791-557132 4.38e-01 100 chrXII:445290-445806 1.27e-01 100 chrVII:254344-254860 9.65e-01 100 chrIV:599902-600081 1.19e-01 100 chrVIII:396871-397073 2.07e-04 23_[+3(5.55e-08)]_62 chrII:393883-394399 1.84e-01 100 chrXI:428643-428875 7.56e-03 70_[+3(9.93e-07)]_15 chrXVI:577313-577829 6.90e-01 100 chrXV:506002-506405 7.58e-01 100 chrXIII:702617-702747 1.90e-02 57_[+3(7.14e-06)]_28 chrX:156724-156824 8.87e-01 100 chrXIII:504805-505321 2.28e-01 100 chrXI:551819-552335 7.76e-01 100 chrXII:374165-374511 2.23e-05 72_[+1(1.51e-08)]_8 chrXII:729332-729848 9.81e-01 100 chrVII:610877-611070 2.04e-01 100 chrXII:837747-839125 6.12e-01 100 chrXI:258581-259004 5.18e-01 100 chrXII:673866-674266 1.76e-01 100 chrVII:845482-845874 3.01e-12 26_[+1(3.48e-07)]_7_[+2(6.54e-13)]_\ 17 chrVIII:362219-362735 4.32e-01 100 chrX:210453-210553 4.77e-01 100 chrXIII:732798-733314 7.85e-01 100 chrVII:205401-205700 1.01e-03 26_[+1(1.22e-07)]_54 chrV:362988-363259 6.31e-02 100 chrV:77559-77881 9.89e-01 100 chrVII:882661-883077 4.59e-01 100 chrXI:459364-459880 2.90e-01 100 chrXI:108297-108813 3.38e-01 100 chrIV:1194598-1195114 7.21e-01 100 chrX:652051-652151 8.27e-01 100 chrXIV:413828-414860 5.15e-01 100 chrVII:649070-649240 4.68e-01 100 chrIV:428004-428520 6.53e-01 100 chrXIII:163577-164159 4.05e-01 100 chrXIV:104665-105038 2.70e-13 9_[+1(1.02e-09)]_9_[+2(1.03e-10)]_\ 32 chrXIII:420214-420508 9.57e-01 100 chrXII:369254-370290 8.12e-01 100 chrXII:1040718-1041234 4.34e-01 100 chrIV:48911-49427 7.65e-01 100 chrXIII:850934-851450 7.15e-01 100 chrX:121641-121741 9.99e-01 100 chrXIV:88947-89740 1.08e-03 25_[-3(8.96e-08)]_60 chrXII:954432-954643 3.45e-01 100 chrXV:1004267-1004783 7.61e-03 10_[-3(9.93e-07)]_75 chrXVI:298213-298466 1.66e-01 100 chrX:414818-414918 4.80e-05 45_[+1(3.91e-09)]_35 chrXIV:716028-716592 8.31e-02 100 chrXI:100724-101240 1.19e-01 100 chrXV:444726-446152 5.29e-01 100 chrVIII:147935-148368 7.50e-01 100 chrIV:929797-930313 6.88e-01 100 chrIV:1492474-1492990 6.09e-02 17_[+3(2.35e-05)]_68 chrXVI:67038-67278 2.66e-02 39_[-2(1.04e-05)]_31 chrI:141567-141994 4.91e-01 100 chrXV:426495-427011 9.11e-01 100 chrVII:930923-931179 2.53e-01 100 chrVII:858727-859243 3.25e-02 37_[+3(4.07e-05)]_48 chrVII:439132-439884 9.55e-01 100 chrXVI:654298-654814 1.68e-02 41_[-3(5.77e-06)]_44 chrVII:556037-556397 8.37e-01 100 chrXVI:795265-795543 5.46e-01 100 chrVII:641422-641938 3.50e-01 100 chrX:123443-123543 5.38e-02 10_[+3(1.55e-05)]_75 chrIV:1080484-1080906 6.53e-01 100 chrXII:819892-820408 6.52e-01 100 chrXIII:753733-753989 5.29e-01 100 chrVII:328481-328817 2.48e-09 17_[+2(1.55e-13)]_53 chrIV:444113-444399 5.39e-01 100 chrII:392504-392859 4.10e-01 100 chrXVI:113585-114101 7.07e-01 100 chrXIII:761852-762054 2.31e-01 100 chrII:165113-165522 9.53e-01 100 chrXIII:761934-762450 5.58e-01 100 chrV:225431-225740 3.58e-04 16_[+3(3.95e-07)]_69 chrXV:93024-94203 4.27e-01 100 chrXIII:759501-760017 3.17e-02 43_[-3(9.52e-06)]_42 chrVII:384588-384984 3.61e-01 100 chrIV:308486-309002 8.50e-02 73_[-1(7.96e-05)]_7 chrII:60303-60461 9.74e-01 100 chrXIII:297007-298854 4.09e-02 [-3(1.04e-05)]_85 chrII:304720-305236 7.42e-01 100 chrIX:98860-99376 5.41e-01 100 chrVIII:381501-382224 8.84e-01 100 chrIV:1236544-1237666 5.29e-01 100 chrIV:1168016-1168532 1.73e-01 100 chrXV:28752-29268 5.47e-01 100 chrXV:841556-842072 7.99e-01 100 chrXIV:577046-577341 5.91e-01 100 chrXI:615655-616171 2.30e-01 100 chrV:424823-425117 3.60e-01 100 chrX:204638-204738 7.99e-06 42_[+2(1.97e-08)]_28 chrX:531815-531915 2.76e-01 100 chrXII:1012103-1012489 7.07e-01 100 chrV:438555-438834 5.41e-05 61_[+1(1.12e-07)]_19 chrVII:148455-148747 6.45e-01 100 chrXVI:272058-272574 3.48e-02 24_[-3(2.35e-05)]_61 chrIII:57913-58429 9.86e-01 100 chrVII:561353-561869 9.26e-01 100 chrVII:641023-641539 9.00e-01 100 chrXVI:696793-697309 1.86e-01 100 chrXIV:507081-507597 9.02e-01 100 chrIV:116472-116988 9.59e-01 100 chrXV:1004125-1004440 6.58e-03 26_[-3(1.33e-06)]_59 chrXIV:186985-187501 6.09e-01 100 chrX:526393-526493 2.36e-01 100 chrXI:320647-321163 9.83e-01 100 chrIV:579507-580594 6.24e-01 100 chrVII:437548-437786 4.98e-02 100 chrXV:409417-409933 8.38e-01 100 chrXII:232056-234195 7.17e-01 100 chrXII:855944-857018 8.06e-03 16_[-1(7.25e-06)]_64 chrIV:627645-628161 3.69e-01 100 chrIII:224830-225346 5.60e-02 47_[-3(1.42e-05)]_38 chrIV:1075366-1075704 3.88e-01 100 chrXIII:669538-670054 1.69e-02 24_[-3(5.77e-06)]_61 chrIV:914013-914485 1.61e-01 40_[-3(5.99e-05)]_45 chrV:139124-140488 1.72e-01 100 chrVI:162070-162375 1.16e-03 61_[+1(3.48e-07)]_19 chrXI:326123-327435 1.55e-01 100 chrV:138495-139154 2.84e-01 100 chrXIII:549689-550205 9.38e-01 100 chrXII:638182-639494 4.89e-01 100 chrIV:652699-653215 2.91e-02 49_[-3(7.14e-06)]_36 chrXV:867685-868075 4.57e-01 100 chrIV:191192-191708 6.23e-01 100 chrXIV:253602-254118 2.74e-01 100 chrXI:676-1192 3.95e-01 100 chrXI:460695-461211 8.38e-01 100 chrXII:636851-638080 2.82e-01 100 chrXVI:733124-733640 5.41e-01 100 chrVIII:388817-389169 4.50e-02 26_[-1(4.61e-05)]_54 chrXII:704347-704585 4.87e-05 35_[-3(1.44e-08)]_50 chrII:135947-136289 1.31e-01 100 chrVII:1057525-1058041 5.05e-01 100 chrXV:977706-978222 1.97e-01 100 chrXVI:580455-580971 5.97e-01 100 chrIV:434174-434439 1.40e-12 15_[-2(1.03e-10)]_9_[-1(1.02e-09)]_\ 26 chrXI:617670-618185 9.07e-02 39_[+3(8.45e-05)]_46 chrIV:221328-221624 1.77e-01 100 chrVII:147058-147574 7.93e-01 100 chrIV:915761-916198 7.21e-02 80_[-3(9.47e-05)]_5 chrVII:281629-282145 8.61e-01 100 chrXII:818469-818760 4.60e-01 100 chrXII:795650-796166 4.33e-01 100 chrV:207285-207801 3.46e-01 100 chrXV:80603-81306 9.67e-01 100 chrXIV:626249-626765 1.85e-01 100 chrII:478900-479317 7.00e-02 74_[-3(1.82e-05)]_11 chrIV:306497-307013 3.10e-01 100 chrVII:156178-156815 3.85e-01 100 chrV:441839-442554 4.91e-01 100 chrIX:129755-130271 1.47e-01 100 chrXII:794019-795254 6.97e-01 100 chrXIV:302779-303696 9.70e-01 100 chrXIII:290657-290954 1.98e-01 100 chrVII:806863-807273 2.35e-01 100 chrXII:510285-510528 1.39e-01 51_[+2(8.68e-05)]_19 chrXI:459161-459677 1.96e-03 76_[-3(1.33e-06)]_9 chrXVI:280580-281482 7.01e-02 100 chrXVI:829793-830309 7.70e-01 100 chrV:250256-250494 1.61e-02 32_[-3(1.99e-05)]_53 chrXII:97508-97875 5.40e-01 100 chrXVI:242765-243086 3.22e-01 100 chrVII:771944-772234 3.09e-03 14_[-3(8.32e-07)]_71 chrII:193590-193793 7.27e-04 70_[+3(3.95e-07)]_15 chrIV:1150696-1151109 8.69e-07 63_[-1(4.76e-11)]_17 chrVII:610497-611013 5.18e-01 100 chrII:680581-680710 6.96e-04 66_[+3(1.68e-07)]_19 chrVII:802374-802890 7.33e-01 100 chrIV:976174-976512 1.05e-01 100 chrXVI:173100-173882 7.12e-01 100 chrIV:508182-508698 9.55e-01 100 chrII:101176-101559 4.27e-01 100 chrVII:277825-278692 4.16e-01 100 chrXVI:398685-399201 7.87e-01 100 chrVII:846660-847176 1.46e-01 100 chrVIII:361859-362375 8.98e-01 100 chrIV:1087101-1087263 2.71e-01 100 chrIV:465154-465580 8.00e-01 100 chrXIII:306555-306748 5.47e-02 100 chrIV:130049-130368 4.03e-01 100 chrXIV:96139-96428 1.22e-07 15_[-2(1.90e-11)]_55 chrVII:700440-701181 4.05e-01 100 chrXIII:253372-253572 5.53e-01 100 chrIV:1202608-1203124 9.66e-01 100 chrIV:1450941-1451428 1.44e-01 100 chrXVI:136298-136550 4.71e-01 100 chrX:139184-139284 3.93e-01 100 chrXII:951646-951844 1.31e-02 51_[+3(4.60e-06)]_34 chrIX:69243-69499 5.28e-01 100 chrI:151469-151687 2.37e-02 100 chrVII:185567-185907 1.97e-14 34_[-2(3.25e-13)]_9_[-1(3.91e-09)]_\ 7 chrIX:380556-380805 3.59e-04 3_[-3(1.32e-07)]_42_[+3(8.94e-07)]_\ 25 chrXIV:301661-302022 4.34e-02 100 chrV:288312-288684 7.74e-06 50_[-1(5.48e-10)]_30 chrVIII:126805-127108 1.97e-01 100 chrIV:619866-620137 4.04e-10 25_[-2(1.49e-08)]_9_[-1(1.51e-08)]_\ 16 chrX:291028-291128 2.15e-02 100 chrIV:217826-218077 1.12e-01 100 chrXII:1042983-1043499 5.19e-01 100 chrX:412325-412425 7.98e-01 100 chrVIII:34416-35416 1.13e-01 100 chrXVI:406900-407121 5.52e-01 100 chrXI:112894-113410 7.22e-01 100 chrXVI:74990-75257 1.16e-02 18_[-3(2.18e-05)]_67 chrVII:345974-346653 9.54e-01 100 chrVII:779509-779766 1.22e-07 62_[+2(1.90e-11)]_8 chrIV:1161479-1161995 4.72e-04 3_[-3(1.99e-05)]_8_[+2(2.49e-05)]_\ 44 chrXII:283014-283880 3.88e-01 100 chrVII:479304-480001 7.99e-01 100 chrXII:806110-806426 3.86e-01 100 chrIV:210078-210594 1.97e-01 100 chrVII:609644-610007 3.79e-02 77_[+3(2.50e-05)]_8 chrII:473889-474405 8.51e-01 100 chrXVI:246334-246850 3.45e-01 100 chrXII:951210-951726 1.25e-02 37_[-1(4.54e-06)]_43 chrXII:439933-440236 7.20e-03 80_[+3(7.83e-06)]_5 chrX:374300-374400 1.15e-08 45_[-2(8.83e-12)]_25 chrXIV:62377-62629 2.51e-01 100 chrII:604558-605195 1.18e-02 80_[-3(3.53e-06)]_5 chrXVI:689427-689784 6.53e-06 15_[+1(5.48e-10)]_65 chrXI:430944-431167 5.90e-01 100 chrVII:986827-987156 7.55e-02 100 chrXVI:433922-434270 7.30e-01 100 chrIX:257571-258087 8.38e-02 100 chrXI:379528-379808 9.42e-04 67_[+1(1.12e-07)]_13 chrXII:822213-822729 2.77e-01 100 chrIV:489809-490325 7.20e-01 100 chrX:620445-620545 1.01e-01 100 chrV:106520-107036 5.59e-01 100 chrVII:774193-774540 3.42e-14 38_[+1(3.37e-10)]_9_[+2(1.36e-10)]_\ 3 chrXII:875237-875568 7.28e-06 29_[+1(4.68e-10)]_51 chrXII:930741-931226 8.45e-02 79_[+3(4.37e-05)]_6 chrVIII:170847-171363 3.56e-01 100 chrVI:226525-226877 3.50e-12 4_[-3(1.68e-05)]_3_[+3(4.21e-06)]_7_\ [-2(3.25e-13)]_26 chrIV:768372-768563 7.36e-01 100 chrIX:249743-250259 1.92e-01 100 chrXVI:769093-769531 5.89e-06 14_[-1(4.68e-10)]_66 chrV:67114-67630 9.69e-01 100 chrXIV:628733-628958 1.27e-01 17_[-3(4.07e-05)]_68 chrVII:625194-625462 7.55e-02 100 chrII:393354-393611 2.49e-01 100 chrVIII:375317-375934 4.30e-01 100 chrIV:541254-541893 6.62e-03 37_[+3(1.15e-06)]_48 chrV:396949-397188 9.07e-01 100 chrXV:594262-594568 1.75e-01 34_[-1(7.44e-05)]_46 chrIV:808670-809186 1.02e-01 24_[+3(8.94e-05)]_61 chrV:152517-153033 1.05e-03 76_[-3(8.96e-08)]_9 chrVII:480133-480732 9.60e-01 100 chrXII:695958-696474 4.52e-01 100 chrVIII:222599-222906 8.46e-04 32_[-3(1.68e-07)]_53 chrXV:323354-323870 7.43e-01 100 chrI:69685-70170 5.48e-01 100 chrII:555917-556433 3.94e-01 100 chrXVI:622453-622818 2.01e-05 20_[-1(3.91e-09)]_60 chrVII:1050099-1050615 9.57e-03 9_[+3(7.83e-06)]_76 chrXV:989115-989417 4.73e-02 32_[-1(7.44e-05)]_48 chrVIII:35438-35998 4.33e-01 100 chrIV:340549-341065 5.57e-01 100 chrVII:255332-255848 3.51e-01 100 chrIV:541254-541896 6.62e-03 35_[+3(1.15e-06)]_50 chrV:68020-68239 3.25e-01 100 chrVII:648168-648507 5.33e-01 100 chrX:598436-598536 6.62e-02 100 chrVII:88540-89056 5.98e-01 100 chrVIII:384746-385071 8.08e-02 85_[+3(2.88e-05)] chrX:136040-136140 4.89e-01 100 chrIV:130242-130515 6.52e-01 100 chrXI:364903-365158 6.23e-01 100 chrIV:470230-470746 5.75e-01 100 chrX:422803-422903 5.84e-11 34_[+1(4.37e-08)]_9_[+2(3.56e-10)]_\ 7 chrX:531717-531817 2.97e-15 15_[+1(3.48e-07)]_7_[+2(6.54e-13)]_\ 9_[-3(3.88e-06)]_4 chrXIV:499839-500922 8.56e-01 100 chrXII:459520-459942 6.04e-03 42_[+1(4.76e-06)]_38 chrXI:259132-259923 2.10e-01 100 chrIV:1490045-1490424 4.31e-01 100 chrXII:734705-734935 3.45e-14 37_[+1(1.80e-09)]_10_[+2(1.12e-12)]_\ 3 chrXIV:215691-216207 1.93e-02 24_[-3(4.21e-06)]_61 chrXII:281787-282303 5.72e-01 100 chrIV:200425-200941 2.15e-02 39_[+3(2.35e-05)]_46 chrXVI:192257-192773 3.34e-01 100 chrXII:88187-88473 5.03e-01 100 chrXV:424396-424609 5.79e-01 100 chrIV:802474-802990 9.34e-07 56_[-2(1.49e-10)]_14 chrXIII:499718-500567 3.28e-01 100 chrIV:568756-569144 1.15e-08 15_[+2(8.83e-12)]_55 chrXI:109486-110026 7.03e-01 100 chrXI:68401-68917 4.54e-01 100 chrXIV:20068-20584 4.08e-02 26_[-1(8.50e-05)]_54 chrXIII:24011-24527 3.73e-01 100 chrXI:518840-519261 3.76e-02 100 chrII:504535-504712 4.12e-01 100 chrIV:1305510-1305779 1.23e-06 41_[+1(1.36e-10)]_39 chrII:422568-423084 8.70e-01 100 chrII:380790-381306 9.89e-01 100 chrVII:149240-149413 3.60e-01 100 chrVII:766169-766480 3.75e-01 100 chrVII:399543-399896 4.75e-01 100 chrXIII:146850-147456 2.45e-01 100 chrII:143639-144155 2.66e-03 13_[+3(2.57e-07)]_72 chrXIV:392329-392756 9.61e-01 100 chrXII:656867-657107 1.42e-13 4_[-2(1.36e-10)]_9_[-1(3.37e-10)]_\ 37 chrII:332926-333442 9.05e-01 100 chrV:51899-52264 9.13e-01 100 chrXVI:829092-829324 3.00e-01 100 chrXII:605162-605571 8.78e-01 100 chrXII:899330-899584 4.65e-01 100 chrII:375109-375625 9.68e-01 100 chrII:234966-235482 2.30e-02 52_[-3(9.52e-06)]_33 chrVII:734825-735341 3.92e-01 100 chrV:431057-431518 1.91e-01 100 chrIV:555799-556308 3.87e-01 100 chrXVI:718426-719342 1.10e-01 100 chrIV:1441397-1441913 1.87e-02 85_[-3(5.77e-06)] chrXIII:19602-19773 4.73e-01 100 chrV:52341-52916 1.65e-01 100 chrX:90805-90905 7.50e-01 100 chrXV:778755-779271 6.03e-01 100 chrXIII:504718-504979 4.99e-01 100 chrV:99993-100309 1.83e-06 65_[+2(2.59e-09)]_5 chrVII:115349-115715 5.35e-13 11_[+1(4.68e-10)]_32_[+2(7.79e-11)]_\ 7 chrXIII:550650-551001 2.97e-01 100 chrXVI:810586-810784 9.30e-05 46_[+1(2.04e-08)]_34 chrIV:386490-387006 1.33e-01 100 chrXIII:552234-552500 3.65e-01 100 chrXIV:106991-107507 6.59e-01 100 chrIV:892324-892840 1.85e-02 5_[+3(5.64e-05)]_31_[+3(1.20e-05)]_\ 34 chrV:546109-546625 4.39e-01 100 chrXVI:98594-99110 3.59e-03 56_[+3(7.67e-07)]_29 chrIV:467987-468503 8.18e-01 100 chrXVI:842793-843184 1.17e-01 100 chrXI:140932-141206 2.38e-09 6_[-2(1.55e-13)]_64 chrXII:1002287-1002803 2.17e-01 100 chrVIII:171058-171574 1.20e-01 58_[-3(8.45e-05)]_27 chrV:77981-78132 6.28e-02 100 chrVIII:35438-35995 4.16e-01 100 chrXV:965831-966347 4.75e-03 9_[+3(5.12e-06)]_76 chrXIII:362954-363233 1.37e-02 54_[+2(1.45e-05)]_16 chrXIV:374774-375047 9.78e-13 14_[+1(3.91e-09)]_27_[+2(1.90e-11)]_\ 9 chrIX:393369-393683 3.13e-02 53_[+1(7.58e-06)]_27 chrII:605271-605661 4.44e-02 80_[+3(3.77e-05)]_5 chrI:142285-143424 3.39e-01 100 chrXVI:286231-286747 3.20e-01 100 chrXV:832388-832717 2.46e-01 100 chrXIII:851731-852247 6.77e-01 100 chrXIII:220526-221042 8.19e-01 100 chrIV:464282-464798 5.03e-01 100 chrVI:183274-183680 1.18e-01 100 chrV:260342-260858 9.16e-01 100 chrXII:263774-264089 1.33e-01 55_[+3(7.54e-05)]_30 chrXI:309269-309785 2.93e-01 100 chrXIV:174209-174621 6.79e-01 100 chrVIII:114391-114907 3.37e-01 100 chrXVI:282262-282604 9.92e-01 100 chrV:306580-306895 2.34e-01 100 chrXVI:452674-453190 4.18e-01 100 chrXI:163800-164316 1.52e-02 7_[+1(8.50e-05)]_73 chrII:88985-89224 1.84e-01 100 chrVII:366133-366634 1.67e-01 100 chrIII:90747-91069 6.38e-04 6_[+1(1.22e-07)]_74 chrIV:281849-282365 1.12e-01 100 chrXII:516168-516684 6.41e-02 100 chrVII:481412-482816 3.04e-01 100 chrXII:789810-790050 1.23e-01 100 chrXII:784226-784574 2.24e-07 9_[+1(4.76e-11)]_71 chrVII:399039-399657 2.06e-01 100 chrIV:1302145-1302387 9.07e-03 4_[-3(1.42e-05)]_81 chrXIII:511536-511798 5.64e-01 100 chrII:169218-169485 6.99e-01 100 chrVII:596704-597220 1.91e-02 23_[-1(2.68e-05)]_57 chrX:159669-159769 5.13e-01 100 chrXIII:163168-163620 1.01e-02 43_[+3(1.98e-06)]_42 chrII:414005-414389 1.70e-01 100 chrVII:970510-971026 2.91e-01 100 chrXV:284381-284897 6.65e-01 100 chrXIV:108608-109124 2.34e-01 100 chrXIV:585752-586532 2.39e-01 100 chrXIII:651291-651807 9.69e-01 100 chrXII:498961-499731 6.80e-01 100 chrX:197212-197312 6.42e-13 8_[-2(1.36e-10)]_9_[-1(3.37e-10)]_\ 33 chrXVI:860244-860543 3.01e-12 41_[+1(3.48e-07)]_7_[+2(6.54e-13)]_\ 2 chrXV:473026-473542 1.00e-01 100 chrV:176966-177410 4.77e-01 100 chrXV:415223-415739 7.09e-01 100 chrII:606589-606834 1.73e-01 100 chrIV:322614-323375 7.33e-01 100 chrV:269539-269700 5.76e-01 100 chrVII:1021101-1021617 2.78e-01 100 chrIX:255693-256116 4.64e-03 13_[-3(2.92e-06)]_19_[+3(2.35e-05)]_\ 38 chrV:23486-24002 6.11e-01 100 chrIII:228752-229139 7.26e-04 69_[-3(8.96e-08)]_16 chrXIII:408446-408798 6.83e-04 19_[+3(8.63e-06)]_20_[-2(4.11e-05)]_\ 16 chrX:73706-73806 9.94e-01 100 chrV:306851-307367 5.85e-02 100 chrIX:102827-103343 2.96e-01 100 chrV:434194-434710 5.05e-01 100 chrVII:344297-344813 3.30e-01 100 chrXIII:891550-892066 3.38e-01 100 chrXIV:331954-332313 4.76e-01 100 chrVIII:127425-127678 4.82e-01 100 chrV:102234-102750 2.91e-01 100 chrXIII:288435-288935 8.70e-01 100 chrII:165845-166361 8.12e-01 100 chrV:298332-298494 9.54e-01 100 chrVI:224967-225483 7.19e-01 100 chrVII:533945-534438 5.72e-01 100 chrVIII:237708-238092 4.91e-12 5_[-2(1.03e-10)]_28_[-1(3.91e-09)]_\ 17 chrV:423734-424094 4.74e-01 100 chrXV:796887-797427 8.50e-01 100 chrXII:47456-47995 7.15e-01 100 chrI:66531-66668 5.31e-01 100 chrIV:359441-359747 7.28e-06 38_[+1(4.68e-10)]_42 chrIV:1163559-1163839 4.12e-01 100 chrIV:916581-917097 8.60e-01 100 chrV:487247-487537 8.26e-01 100 chrV:85662-86809 3.59e-02 71_[-3(1.55e-05)]_14 chrXI:100414-100930 1.49e-01 53_[-1(6.29e-05)]_27 chrXVI:432777-433931 3.74e-01 100 chrXI:578801-579234 5.35e-13 3_[+1(4.68e-10)]_32_[+2(7.79e-11)]_\ 15 chrXIV:494192-494684 1.93e-01 100 chrXVI:654743-655021 8.40e-01 100 chrVII:806241-806472 2.59e-02 61_[+3(5.12e-06)]_24 chrIX:389264-389714 7.48e-01 100 chrXI:158957-159473 4.55e-01 100 chrXVI:641279-641542 1.19e-02 54_[+3(1.82e-05)]_31 chrVII:96732-97248 2.43e-01 100 chrXIV:461789-462305 3.85e-01 100 chrXII:242512-242745 1.81e-02 84_[-3(6.47e-06)]_1 chrVII:518551-519067 7.37e-01 100 chrVII:545489-545756 6.93e-01 100 chrV:236519-237035 4.70e-02 26_[+2(5.11e-05)]_44 chrXIII:533723-534239 8.77e-02 70_[+1(9.69e-05)]_10 chrVII:598896-599136 1.15e-05 29_[+3(1.44e-08)]_56 chrIV:221561-221803 4.15e-01 100 chrVI:54487-55003 9.69e-01 100 chrXII:728219-728568 5.86e-01 100 chrXII:440808-441003 8.46e-01 100 chrXVI:461527-462043 5.03e-02 39_[+3(1.99e-05)]_46 chrXII:229953-230469 5.34e-01 100 chrIV:884218-884588 5.85e-05 13_[+1(3.64e-08)]_67 chrXI:68205-68607 6.96e-01 100 chrXII:1018183-1018563 3.06e-01 100 chrXIII:879526-879741 9.34e-01 100 chrVIII:411215-411671 6.49e-01 100 chrIV:1201598-1201940 9.01e-15 36_[+1(3.91e-09)]_9_[+2(3.25e-13)]_\ 5 chrIX:317745-318038 6.87e-01 100 chrVII:533945-534414 5.72e-01 100 chrXII:523140-523427 2.78e-01 100 chrXII:921865-922381 8.23e-01 100 chrV:409192-409568 5.63e-01 100 chrIX:316959-317285 3.72e-01 100 chrXV:976341-976653 3.65e-06 8_[+2(3.56e-10)]_62 chrII:9349-9865 7.40e-05 31_[+1(1.85e-08)]_49 chrVII:701996-702512 6.71e-01 100 chrVIII:282412-282590 7.28e-03 25_[-3(8.94e-07)]_60 chrX:79224-79324 5.54e-01 100 chrV:141022-141389 1.90e-01 100 chrX:91280-91380 6.61e-01 100 chrVIII:115985-116377 9.43e-06 22_[-1(1.02e-09)]_58 chrXV:897564-897693 3.56e-01 100 chrXII:722795-723311 6.80e-01 100 chrXII:819418-819934 5.19e-01 100 chrXVI:188635-188956 9.30e-04 85_[-3(2.57e-07)] chrXIV:722428-722944 5.18e-01 100 chrVIII:504805-504961 1.45e-01 54_[+1(8.22e-05)]_26 chrII:530444-530960 7.91e-01 100 chrI:70439-71056 9.75e-01 100 chrXII:806393-806929 4.05e-01 100 chrVII:866419-866935 4.29e-01 100 chrV:79366-79639 4.24e-01 100 chrXVI:297911-298100 7.87e-01 100 chrVII:1051658-1052174 4.93e-01 100 chrXIV:230173-230440 6.02e-02 100 chrXIII:534013-534529 7.36e-01 100 chrV:61201-62091 7.64e-02 78_[-3(6.68e-05)]_7 chrVII:339112-339628 5.71e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************