Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.011045 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.054803 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.067329 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.011644 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background Finished invoke: name: bg status: 0 time: 0.009455 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 799.369711 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/seqs-shuffled Finished invoke: name: dreme status: 0 time: 60.949971 Invoking: centrimo -seqlen 324 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.199558 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.466879 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background -primary GSBBNBDTRGYBYAGTGGKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.32691 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background -primary KTAAYCRDRAGRTCMBGGGTTCGATYCCSV /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.303948 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background -primary WRATGTAYGGRTGTW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.293325 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background -primary ACCAACTK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.184047 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background -primary ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.189208 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background -primary GCGCYAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.18908 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background -primary CCGTGGAR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.189508 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background -primary CCAAVAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.193259 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background -primary CTATCACR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.18739 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background -primary GYGGTCTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.193269 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background -primary SAAGAW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.217686 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background -primary CGSCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.206148 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background -primary ACAARGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.18903 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background -primary GGCSCAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.169152 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background -primary GCACGS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.197749 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/spamo_out_16 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background -primary GGRGATCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.181734 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background --motif GSBBNBDTRGYBYAGTGGKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa Finished invoke: name: fimo1 status: 0 time: 0.17976 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background --motif KTAAYCRDRAGRTCMBGGGTTCGATYCCSV /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa Finished invoke: name: fimo2 status: 0 time: 0.183321 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background --motif WRATGTAYGGRTGTW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa Finished invoke: name: fimo3 status: 0 time: 0.172193 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background --motif ACCAACTK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa Finished invoke: name: fimo4 status: 0 time: 0.086131 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background --motif ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa Finished invoke: name: fimo5 status: 0 time: 0.085867 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background --motif GCGCYAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa Finished invoke: name: fimo6 status: 0 time: 0.084977 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background --motif CCGTGGAR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa Finished invoke: name: fimo7 status: 0 time: 0.087887 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background --motif CCAAVAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa Finished invoke: name: fimo8 status: 0 time: 0.086905 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background --motif CTATCACR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa Finished invoke: name: fimo9 status: 0 time: 0.086493 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background --motif GYGGTCTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa Finished invoke: name: fimo10 status: 0 time: 0.086502 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background --motif SAAGAW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa Finished invoke: name: fimo11 status: 0 time: 0.071439 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background --motif CGSCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa Finished invoke: name: fimo12 status: 0 time: 0.085308 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background --motif ACAARGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa Finished invoke: name: fimo13 status: 0 time: 0.085757 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background --motif GGCSCAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa Finished invoke: name: fimo14 status: 0 time: 0.084008 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background --motif GCACGS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa Finished invoke: name: fimo15 status: 0 time: 0.083596 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/fimo_out_16 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/background --motif GGRGATCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/YJM789--PDR3.fa Finished invoke: name: fimo16 status: 0 time: 0.085497 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--PDR3/summary.tsv Finished invoke: name: summary status: 0 time: 0.160902 Done