Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.011432 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.055179 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.069435 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.012455 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background Finished invoke: name: bg status: 0 time: 0.010567 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 749.253061 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/seqs-shuffled Finished invoke: name: dreme status: 0 time: 136.977746 Invoking: centrimo -seqlen 360 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.230042 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.37134 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background -primary TAMCCACTRVRCYAHVNVVSC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.437149 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background -primary SGGRRTCGAACCSVKGAYCTY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.341334 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background -primary AGGCGYMAGACTNKWAATCWK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.315021 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background -primary ATGTAYGG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.233073 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background -primary AGCGCV /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.463711 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background -primary ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.238024 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background -primary ATAGTKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.228657 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background -primary CACGGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.229824 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background -primary TAGCTCR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.265788 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background -primary TCTCCACR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.207582 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background -primary GTTGGK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.252647 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background -primary ARAAARAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.224383 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background -primary TAATCWGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.238479 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background -primary AGCGWGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.210946 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background -primary RCACCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.431103 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background --motif TAMCCACTRVRCYAHVNVVSC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa Finished invoke: name: fimo1 status: 0 time: 0.195208 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background --motif SGGRRTCGAACCSVKGAYCTY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa Finished invoke: name: fimo2 status: 0 time: 0.198861 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background --motif AGGCGYMAGACTNKWAATCWK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa Finished invoke: name: fimo3 status: 0 time: 0.195662 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background --motif ATGTAYGG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa Finished invoke: name: fimo4 status: 0 time: 0.140387 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background --motif AGCGCV /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa Finished invoke: name: fimo5 status: 0 time: 0.106684 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background --motif ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa Finished invoke: name: fimo6 status: 0 time: 0.11637 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background --motif ATAGTKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa Finished invoke: name: fimo7 status: 0 time: 0.106984 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background --motif CACGGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa Finished invoke: name: fimo8 status: 0 time: 0.096615 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background --motif TAGCTCR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa Finished invoke: name: fimo9 status: 0 time: 0.120385 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background --motif TCTCCACR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa Finished invoke: name: fimo10 status: 0 time: 0.110297 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background --motif GTTGGK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa Finished invoke: name: fimo11 status: 0 time: 0.093587 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background --motif ARAAARAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa Finished invoke: name: fimo12 status: 0 time: 0.09613 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background --motif TAATCWGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa Finished invoke: name: fimo13 status: 0 time: 0.128753 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background --motif AGCGWGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa Finished invoke: name: fimo14 status: 0 time: 0.124229 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background --motif RCACCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/YJM789--NOT3.fa Finished invoke: name: fimo15 status: 0 time: 0.112383 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/summary.tsv Finished invoke: name: summary status: 0 time: 0.205298 Done