******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrXII:459489-460073 1.0000 100 chrIX:316127-316591 1.0000 100 chrXV:167986-168425 1.0000 100 chrII:477076-477453 1.0000 100 chrXII:796413-796859 1.0000 100 chrXV:216253-216671 1.0000 100 chrXII:922116-922535 1.0000 100 chrIII:163457-163862 1.0000 100 chrXIII:551382-551786 1.0000 100 chrII:332317-332727 1.0000 100 chrV:305802-306199 1.0000 100 chrV:140473-140872 1.0000 100 chrXII:713167-713550 1.0000 100 chrVII:149118-149498 1.0000 100 chrXVI:699979-700369 1.0000 100 chrIV:117193-117573 1.0000 100 chrIV:1359393-1359784 1.0000 100 chrVIII:74965-75360 1.0000 100 chrXII:673823-674218 1.0000 100 chrVIII:382931-383309 1.0000 100 chrVII:534801-535212 1.0000 100 chrXV:1028705-1029074 1.0000 100 chrII:592912-593273 1.0000 100 chrVIII:125950-126297 1.0000 100 chrXI:618826-619190 1.0000 100 chrXII:781481-781828 1.0000 100 chrIV:130599-130944 1.0000 100 chrXVI:731941-732298 1.0000 100 chrXV:866586-866932 1.0000 100 chrVII:310526-310880 1.0000 100 chrVII:788343-788704 1.0000 100 chrXIV:63138-63498 1.0000 100 chrV:53534-53920 1.0000 100 chrX:73417-73759 1.0000 100 chrXV:505136-505494 1.0000 100 chrX:703284-703613 1.0000 100 chrXII:460502-460841 1.0000 100 chrX:90088-90424 1.0000 100 chrIV:1300964-1301324 1.0000 100 chrVII:648967-649322 1.0000 100 chrIV:1401261-1401592 1.0000 100 chrX:75361-75719 1.0000 100 chrXIII:225373-225709 1.0000 100 chrIV:411281-411617 1.0000 100 chrV:396230-396564 1.0000 100 chrXII:241652-241982 1.0000 100 chrII:415525-415862 1.0000 100 chrVII:254168-254529 1.0000 100 chrVI:95488-95833 1.0000 100 chrXIII:145902-146267 1.0000 100 chrXV:79790-80099 1.0000 100 chrIX:99675-100000 1.0000 100 chrXVI:520182-520520 1.0000 100 chrII:89645-89958 1.0000 100 chrVIII:505851-506179 1.0000 100 chrIV:221978-222305 1.0000 100 chrV:423127-423439 1.0000 100 chrXI:158248-158591 1.0000 100 chrII:45017-45331 1.0000 100 chrIV:341299-341605 1.0000 100 chrIV:308031-308364 1.0000 100 chrXIV:495217-495533 1.0000 100 chrXIII:732054-732370 1.0000 100 chrXV:779727-780059 1.0000 100 chrVII:555342-555674 1.0000 100 chrX:617753-618082 1.0000 100 chrVII:661576-661906 1.0000 100 chrVI:65002-65313 1.0000 100 chrII:60882-61230 1.0000 100 chrVII:438590-438894 1.0000 100 chrVII:726441-726745 1.0000 100 chrXV:92964-93285 1.0000 100 chrXI:302748-303116 1.0000 100 chrXIV:241405-241719 1.0000 100 chrXIII:379242-379573 1.0000 100 chrXVI:406223-406528 1.0000 100 chrIII:227780-228131 1.0000 100 chrXIII:259079-259404 1.0000 100 chrIX:254249-254534 1.0000 100 chrIX:248663-249029 1.0000 100 chrXV:94485-94817 1.0000 100 chrX:542858-543212 1.0000 100 chrXVI:76381-76692 1.0000 100 chrX:390942-391293 1.0000 100 chrXII:1028247-1028546 1.0000 100 chrVII:287267-287622 1.0000 100 chrVIII:103923-104231 1.0000 100 chrIV:1175665-1175998 1.0000 100 chrXII:932112-932461 1.0000 100 chrX:424369-424691 1.0000 100 chrXVI:622470-622799 1.0000 100 chrVIII:116010-116352 1.0000 100 chrX:651294-651580 1.0000 100 chrXII:366091-366417 1.0000 100 chrX:415868-416202 1.0000 100 chrV:138501-138894 1.0000 100 chrVIII:132949-133289 1.0000 100 chrXVI:744136-744463 1.0000 100 chrVIII:62602-62923 1.0000 100 chrXIII:808129-808470 1.0000 100 chrXV:228161-228484 1.0000 100 chrVI:210522-210868 1.0000 100 chrVIII:388814-389161 1.0000 100 chrIX:257369-257677 1.0000 100 chrII:604154-604443 1.0000 100 chrXIII:296802-297115 1.0000 100 chrXVI:769106-769473 1.0000 100 chrVII:878623-878968 1.0000 100 chrXVI:860215-860535 1.0000 100 chrX:422769-423092 1.0000 100 chrXIII:572752-573124 1.0000 100 chrXVI:689402-689749 1.0000 100 chrXIV:96141-96449 1.0000 100 chrIV:437604-437947 1.0000 100 chrXII:167869-168191 1.0000 100 chrIV:1150736-1151109 1.0000 100 chrXVI:435784-436130 1.0000 100 chrX:414805-415141 1.0000 100 chrXII:1018980-1019341 1.0000 100 chrXV:226521-226849 1.0000 100 chrXIII:290645-290955 1.0000 100 chrVII:110425-110814 1.0000 100 chrIII:127551-127871 1.0000 100 chrXII:605203-605580 1.0000 100 chrVII:828535-828964 1.0000 100 chrXV:340182-340530 1.0000 100 chrV:86424-86781 1.0000 100 chrXIII:131723-132063 1.0000 100 chrV:311916-312245 1.0000 100 chrXIII:362931-363224 1.0000 100 chrVII:730970-731331 1.0000 100 chrXIII:837759-838093 1.0000 100 chrXVI:775653-775995 1.0000 100 chrIV:1017098-1017454 1.0000 100 chrVII:845479-845833 1.0000 100 chrIX:300141-300466 1.0000 100 chrVI:221747-222058 1.0000 100 chrVIII:358376-358741 1.0000 100 chrVII:412213-412528 1.0000 100 chrVII:736162-736532 1.0000 100 chrX:523927-524259 1.0000 100 chrX:233769-234079 1.0000 100 chrXII:897741-898013 1.0000 100 chrVI:162072-162379 1.0000 100 chrII:197328-197624 1.0000 100 chrIX:325595-325940 1.0000 100 chrXII:448565-448873 1.0000 100 chrXIII:754451-754743 1.0000 100 chrIV:1075393-1075705 1.0000 100 chrXVI:819358-819678 1.0000 100 chrVII:541686-542082 1.0000 100 chrX:157471-157787 1.0000 100 chrXV:274506-274863 1.0000 100 chrV:431075-431512 1.0000 100 chrXVI:560049-560454 1.0000 100 chrXV:438476-438854 1.0000 100 chrX:378195-378521 1.0000 100 chrII:266208-266582 1.0000 100 chrVI:167285-167595 1.0000 100 chrXI:108776-109051 1.0000 100 chrII:405707-406094 1.0000 100 chrII:645006-645328 1.0000 100 chrIX:197429-197737 1.0000 100 chrII:326710-327038 1.0000 100 chrVII:440634-440981 1.0000 100 chrXII:48741-49076 1.0000 100 chrVIII:237749-238099 1.0000 100 chrVI:157869-158173 1.0000 100 chrVII:774180-774536 1.0000 100 chrV:176936-177275 1.0000 100 chrX:115843-116175 1.0000 100 chrIII:142616-142938 1.0000 100 chrV:99974-100298 1.0000 100 chrIX:336268-336583 1.0000 100 chrVII:544485-544811 1.0000 100 chrV:288354-288681 1.0000 100 chrXI:308077-308367 1.0000 100 chrI:138992-139295 1.0000 100 chrV:469288-469612 1.0000 100 chrXI:140916-141239 1.0000 100 chrVIII:134165-134529 1.0000 100 chrVII:205354-205665 1.0000 100 chrII:36234-36542 1.0000 100 chrIII:151212-151512 1.0000 100 chrXV:678871-679164 1.0000 100 chrVII:422916-423288 1.0000 100 chrXI:490798-491117 1.0000 100 chrIX:68231-68507 1.0000 100 chrIV:520823-521107 1.0000 100 chrXIV:104654-104967 1.0000 100 chrXII:731982-732257 1.0000 100 chrIV:1201591-1201918 1.0000 100 chrXII:374184-374518 1.0000 100 chrIII:168220-168547 1.0000 100 chrVII:876231-876554 1.0000 100 chrX:374300-374741 1.0000 100 chrIV:1305459-1305769 1.0000 100 chrX:59033-59310 1.0000 100 chrX:197220-197530 1.0000 100 chrXII:793743-794056 1.0000 100 chrIII:149753-150081 1.0000 100 chrV:61772-62099 1.0000 100 chrV:441831-442549 1.0000 100 chrXV:353955-354269 1.0000 100 chrIV:579079-579353 1.0000 100 chrIX:324226-324549 1.0000 100 chrX:355195-355633 1.0000 100 chrII:347432-347742 1.0000 100 chrVII:823346-823652 1.0000 100 chrXII:498534-498849 1.0000 100 chrXII:628215-628591 1.0000 100 chrXII:962903-963211 1.0000 100 chrVII:738972-739264 1.0000 100 chrVII:115338-115690 1.0000 100 chrVI:137339-137702 1.0000 100 chrXII:784208-784525 1.0000 100 chrX:538433-538711 1.0000 100 chrXII:592435-592741 1.0000 100 chrIV:488615-489021 1.0000 100 chrXVI:188640-188902 1.0000 100 chrXIV:102569-102883 1.0000 100 chrXI:578826-579216 1.0000 100 chrXIII:420523-420819 1.0000 100 chrXII:797011-797333 1.0000 100 chrX:204581-204914 1.0000 100 chrVII:328419-328836 1.0000 100 chrXV:571788-572118 1.0000 100 chrII:226941-227253 1.0000 100 chrXV:288033-288344 1.0000 100 chrII:350668-350955 1.0000 100 chrVIII:148957-149235 1.0000 100 chrXIV:567993-568331 1.0000 100 chrVII:779458-779753 1.0000 100 chrIII:90750-91062 1.0000 100 chrIII:123477-123787 1.0000 100 chrIV:568719-569120 1.0000 100 chrVIII:475609-475924 1.0000 100 chrX:396659-396960 1.0000 100 chrXI:46663-46960 1.0000 100 chrXI:162333-162709 1.0000 100 chrIV:992678-992972 1.0000 100 chrXV:663678-664019 1.0000 100 chrIV:1095304-1095611 1.0000 100 chrVI:180806-181187 1.0000 100 chrIX:370250-370560 1.0000 100 chrIX:183345-183668 1.0000 100 chrXV:282000-282325 1.0000 100 chrVI:191475-191762 1.0000 100 chrIV:83407-83697 1.0000 100 chrIV:358123-358394 1.0000 100 chrXII:426964-427290 1.0000 100 chrIV:619864-620182 1.0000 100 chrXV:300928-301304 1.0000 100 chrXII:734646-734955 1.0000 100 chrXIII:747803-748133 1.0000 100 chrIV:1450934-1451185 1.0000 100 chrXIII:195988-196310 1.0000 100 chrVII:794268-794585 1.0000 100 chrXV:594276-594590 1.0000 100 chrI:166143-166424 1.0000 100 chrXIII:480504-480852 1.0000 100 chrXI:74461-74770 1.0000 100 chrXV:113651-113967 1.0000 100 chrXVI:302703-302972 1.0000 100 chrXIV:442867-443213 1.0000 100 chrVII:531476-531780 1.0000 100 chrV:131031-131312 1.0000 100 chrXVI:572104-572442 1.0000 100 chrXIII:586560-586879 1.0000 100 chrXIV:444488-444758 1.0000 100 chrXI:219738-220030 1.0000 100 chrXII:875234-875536 1.0000 100 chrXVI:880197-880527 1.0000 100 chrV:438556-438837 1.0000 100 chrIII:178365-178614 1.0000 100 chrXIII:372379-372648 1.0000 100 chrVII:366122-366385 1.0000 100 chrVIII:175096-175343 1.0000 100 chrVII:857312-857642 1.0000 100 chrXII:214781-215083 1.0000 100 chrXII:656861-657145 1.0000 100 chrV:487244-487526 1.0000 100 chrXVI:378694-378949 1.0000 100 chrX:531689-532013 1.0000 100 chrXIV:374741-374994 1.0000 100 chrX:517748-518041 1.0000 100 chrXI:84050-84328 1.0000 100 chrVII:122137-122430 1.0000 100 chrV:435678-435948 1.0000 100 chrV:354782-355060 1.0000 100 chrXI:513270-513542 1.0000 100 chrX:354132-354415 1.0000 100 chrXVI:56101-56372 1.0000 100 chrXIV:632472-632743 1.0000 100 chrXVI:810549-810862 1.0000 100 chrVII:700504-701190 1.0000 100 chrV:135281-135624 1.0000 100 chrXIII:321058-321361 1.0000 100 chrXIII:504725-505084 1.0000 100 chrXIII:463413-463681 1.0000 100 chrX:541391-541679 1.0000 100 chrV:443120-443376 1.0000 100 chrXI:458439-458812 1.0000 100 chrXV:710041-710326 1.0000 100 chrIV:519630-519891 1.0000 100 chrI:81994-82226 1.0000 100 chrXIII:168701-168988 1.0000 100 chrIV:434183-434442 1.0000 100 chrIV:217200-217479 1.0000 100 chrIV:1352383-1352658 1.0000 100 chrVI:226598-226876 1.0000 100 chrVIII:466902-467128 1.0000 100 chrX:607889-608131 1.0000 100 chrIV:491006-491242 1.0000 100 chrIV:884211-884584 1.0000 100 chrII:9446-9715 1.0000 100 chrV:551221-551465 1.0000 100 chrVII:185590-185917 1.0000 100 chrXIII:91615-92075 1.0000 100 chrVII:930903-931173 1.0000 100 chrXI:431380-431624 1.0000 100 chrXIV:631768-632041 1.0000 100 chrVII:405418-405644 1.0000 100 chrXV:1004141-1004369 1.0000 100 chrXII:282529-282822 1.0000 100 chrV:117981-118210 1.0000 100 chrIV:410229-410500 1.0000 100 chrXV:110892-111122 1.0000 100 chrXV:1025768-1025983 1.0000 100 chrXIV:569795-569997 1.0000 100 chrIII:295377-295592 1.0000 100 chrXIV:560579-560814 1.0000 100 chrXV:464355-464623 1.0000 100 chrV:362239-362445 1.0000 100 chrII:181399-181605 1.0000 100 chrXV:976354-976549 1.0000 100 chrXII:818484-818770 1.0000 100 chrXIV:330877-331081 1.0000 100 chrIII:308749-308982 1.0000 100 chrIV:802652-802872 1.0000 100 chrXII:1052001-1052229 1.0000 100 chrXII:262868-263062 1.0000 100 chrXIV:726089-726299 1.0000 100 chrIV:946282-946524 1.0000 100 chrXII:975893-976104 1.0000 100 chrVIII:212083-212443 1.0000 100 chrVIII:146146-146323 1.0000 100 chrVII:706993-707203 1.0000 100 chrXIV:547050-547279 1.0000 100 chrVII:319739-319918 1.0000 100 chrIV:667926-668114 1.0000 100 chrXII:687698-687842 1.0000 100 chrIV:1461489-1461849 1.0000 100 chrV:250269-250475 1.0000 100 chrXIV:499421-499529 1.0000 100 chrIX:174957-175132 1.0000 100 chrII:88137-88497 1.0000 100 chrVII:311275-311635 1.0000 100 chrX:608642-609002 1.0000 100 chrXIV:500353-500713 1.0000 100 chrVI:101415-101520 1.0000 100 chrIII:82421-82588 1.0000 100 chrIV:668415-668578 1.0000 100 chrIII:292726-293086 1.0000 100 chrXIV:575300-575660 1.0000 100 chrXIII:297876-298236 1.0000 100 chrIV:325459-325819 1.0000 100 chrXVI:718715-719075 1.0000 100 chrXV:80497-80857 1.0000 100 chrV:322168-322528 1.0000 100 chrXVI:282209-282569 1.0000 100 chrX:228196-228556 1.0000 100 chrXV:110262-110622 1.0000 100 chrXIV:585988-586348 1.0000 100 chrXV:622703-623063 1.0000 100 chrXVI:377933-378293 1.0000 100 chrXII:712320-712680 1.0000 100 chrX:663829-664189 1.0000 100 chrVII:319316-319441 1.0000 100 chrIV:1301976-1302336 1.0000 100 chrXII:369406-369766 1.0000 100 chrXVI:795019-795379 1.0000 100 chrXV:1073435-1073795 1.0000 100 chrIV:579792-580152 1.0000 100 chrXIII:159358-159718 1.0000 100 chrXVI:173355-173715 1.0000 100 chrX:701897-702257 1.0000 100 chrVIII:381781-382141 1.0000 100 chrIII:177324-177684 1.0000 100 chrXIV:577093-577453 1.0000 100 chrV:139549-139909 1.0000 100 chrVII:480219-480579 1.0000 100 chrI:147978-148338 1.0000 100 chrXII:794768-795128 1.0000 100 chrII:414752-415112 1.0000 100 chrX:139217-139577 1.0000 100 chrXII:233254-233614 1.0000 100 chrX:74653-75013 1.0000 100 chrVIII:553361-553721 1.0000 100 chrV:363633-363993 1.0000 100 chrXIII:170956-171316 1.0000 100 chrII:622277-622637 1.0000 100 chrVII:52267-52627 1.0000 100 chrXII:1029717-1030077 1.0000 100 chrXII:1059782-1060142 1.0000 100 chrVIII:148176-148536 1.0000 100 chrVII:497195-497555 1.0000 100 chrXV:780514-780874 1.0000 100 chrII:88881-89241 1.0000 100 chrXV:253118-253478 1.0000 100 chrXII:818709-819069 1.0000 100 chrXI:109688-110048 1.0000 100 chrII:6801-7161 1.0000 100 chrI:142986-143346 1.0000 100 chrXV:760583-760943 1.0000 100 chrIV:436351-436711 1.0000 100 chrXV:1054290-1054650 1.0000 100 chrXIV:550089-550449 1.0000 100 chrXI:432014-432374 1.0000 100 chrXIV:174181-174541 1.0000 100 chrX:216030-216390 1.0000 100 chrXIII:875901-876261 1.0000 100 chrXIV:414064-414424 1.0000 100 chrX:669880-670240 1.0000 100 chrXII:1017924-1018284 1.0000 100 chrX:417545-417905 1.0000 100 chrVII:1039-1399 1.0000 100 chrIV:117867-118227 1.0000 100 chrVII:550302-550662 1.0000 100 chrVII:501177-501537 1.0000 100 chrXII:499206-499566 1.0000 100 chrXV:445800-446160 1.0000 100 chrI:142327-142687 1.0000 100 chrXVI:286658-287018 1.0000 100 chrVIII:34442-34802 1.0000 100 chrIV:845925-846285 1.0000 100 chrIV:903786-904146 1.0000 100 chrII:255105-255465 1.0000 100 chrXVI:194118-194478 1.0000 100 chrVII:364831-365191 1.0000 100 chrXIV:331444-331804 1.0000 100 chrXIV:722662-723022 1.0000 100 chrXII:523068-523428 1.0000 100 chrIV:470110-470470 1.0000 100 chrIX:192167-192527 1.0000 100 chrIV:491500-491860 1.0000 100 chrIX:306810-307170 1.0000 100 chrIX:256239-256599 1.0000 100 chrVII:481437-481797 1.0000 100 chrV:408858-409218 1.0000 100 chrXII:898475-898835 1.0000 100 chrXII:283271-283631 1.0000 100 chrX:593612-593972 1.0000 100 chrIV:474841-475201 1.0000 100 chrXV:93741-94101 1.0000 100 chrIII:30715-31075 1.0000 100 chrII:301062-301422 1.0000 100 chrI:166311-166671 1.0000 100 chrXV:159403-159763 1.0000 100 chrVI:116886-117246 1.0000 100 chrVII:277945-278305 1.0000 100 chrV:322372-322732 1.0000 100 chrV:424760-425120 1.0000 100 chrXV:620306-620666 1.0000 100 chrVII:277688-278048 1.0000 100 chrVII:712905-713265 1.0000 100 chrVII:365031-365391 1.0000 100 chrX:683987-684347 1.0000 100 chrX:683760-684120 1.0000 100 chrXII:818890-819094 1.0000 100 chrXI:159034-159394 1.0000 100 chrV:51998-52358 1.0000 100 chrXV:251762-252122 1.0000 100 chrXVI:574990-575350 1.0000 100 chrXIV:331661-332021 1.0000 100 chrV:100845-101205 1.0000 100 chrXVI:404593-404953 1.0000 100 chrIV:673652-674012 1.0000 100 chrIV:78796-79156 1.0000 100 chrIV:79052-79412 1.0000 100 chrXII:806085-806445 1.0000 100 chrXII:209128-209488 1.0000 100 chrXV:1071092-1071452 1.0000 100 chrIV:327932-328292 1.0000 100 chrX:651916-652276 1.0000 100 chrXV:964715-965075 1.0000 100 chrXV:231747-232107 1.0000 100 chrIX:192381-192741 1.0000 100 chrVII:278228-278588 1.0000 100 chrXII:712521-712881 1.0000 100 chrXII:499407-499767 1.0000 100 chrXV:964422-964782 1.0000 100 chrIV:118087-118447 1.0000 100 chrVII:481643-482003 1.0000 100 chrIV:668065-668425 1.0000 100 chrXVI:575207-575567 1.0000 100 chrVI:101521-101881 1.0000 100 chrXV:1071319-1071679 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 498 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 49800 N= 498 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.307 C 0.193 G 0.193 T 0.307 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--NOT3/background): A 0.316 C 0.184 G 0.184 T 0.316 ******************************************************************************** ******************************************************************************** MOTIF TAMCCACTRVRCYAHVNVVSC MEME-1 width = 21 sites = 220 llr = 2965 E-value = 6.3e-578 ******************************************************************************** -------------------------------------------------------------------------------- Motif TAMCCACTRVRCYAHVNVVSC MEME-1 Description -------------------------------------------------------------------------------- Simplified A 365:29::434::a3333312 pos.-specific C 1:4a6:7:23:a7:4222248 probability G :11:11::346::::33445: matrix T 72::::3a1:::3:312111: bits 2.4 * * 2.2 * * 2.0 * * 1.7 * * * * Relative 1.5 * ** * * * Entropy 1.2 * *** **** * (19.4 bits) 1.0 * *** **** * 0.7 ***** **** ** 0.5 * ****** ***** *** 0.2 **************** **** 0.0 --------------------- Multilevel TAACCACTAGGCCACAGGGGC consensus ATC A T GCA T AGAAAC sequence A TCTCC C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAMCCACTRVRCYAHVNVVSC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrIV:410229-410500 - 65 1.22e-09 GGGAGCGCGC TACCGACTACGCCACACGCCC AATATTTGTA chrXIII:321058-321361 + 40 1.22e-09 GGGAGCGCGC TACCGACTACGCCACACGCCC GATTTGTATT chrXII:656861-657145 + 33 1.22e-09 GGGAGCGCGC TACCGACTACGCCACACGCCC AATTTTCTTG chrXI:219738-220030 - 61 1.22e-09 GGGAGCGCGC TACCGACTACGCCACACGCCC TATTTACTGT chrX:197220-197530 + 40 1.22e-09 GGGAGCGCGC TACCGACTACGCCACACGCCC TAATATTATT chrVII:774180-774536 - 41 1.22e-09 GGGAGCGCGC TACCGACTACGCCACACGCCC AATTAATTGA chrXII:214781-215083 + 53 2.78e-09 GGAAGCGCGC TACCAACTGCGCCATGTGCCC TAAAACGCGT chrI:166143-166424 - 34 2.78e-09 GGAAGCGCGC TACCAACTGCGCCATGTGCCC AACTCATTAC chrVII:794268-794585 - 41 2.78e-09 GGAAGCGCGC TACCAACTGCGCCATGTGCCC GCAATCTATG chrV:311916-312245 + 45 2.78e-09 GGAAGCGCGC TACCAACTGCGCCATGTGCCC AGAATTTCTG chrIV:884211-884584 - 14 3.39e-09 CACGAAGCTC TAACCACTGAGCTACACGAGC ATTTTCGAAA chrXII:605203-605580 + 71 3.39e-09 CACGAAGCTC TAACCACTGAGCTACACGAGC ATTTTCGAA chrXI:46663-46960 + 25 5.95e-09 GTGCGATGCC TTACCACTTGGCCAAAAGGGC TGAGTAATTT chrV:288354-288681 + 37 5.95e-09 TCTGTCGCCT TAACCACTCGGCCATAGTGCC TATCATTATG chrXVI:689402-689749 - 40 5.95e-09 TCTGTCGCCT TAACCACTCGGCCATAGTGCC CAAAATAATC chrIX:248663-249029 - 54 5.95e-09 TCTGTCGCCT TAACCACTCGGCCATAGTGCC TAAAACAATG chrIII:227780-228131 - 37 5.95e-09 TCTCTCGCCT TAACCACTCGGCCATAGTGCC ATTTCGATTT chrXII:1052001-1052229 + 59 7.12e-09 ACGGTGCCTT AACCAACTGGGCCAAGAGACC ATGAAAAGGA chrXIV:569795-569997 + 74 7.12e-09 ACGGTGCCTT AACCAACTGGGCCAAGAGACC ACTGTT chrV:551221-551465 + 45 7.12e-09 ACGGTGCCTT AACCAACTGGGCCAAGAGACC TGTAATCTGT chrV:443120-443376 + 57 7.12e-09 ACGGTGCCTT AACCAACTGGGCCAAGAGACC AAATTTTAAT chrXVI:880197-880527 + 37 7.12e-09 ACGGTGCCTT AACCAACTGGGCCAAGAGACC ATTATATTGT chrXII:734646-734955 - 52 7.12e-09 ACGGTGCCTT AACCAACTGGGCCAAGAGACC AAACTTTGTT chrVI:191475-191762 + 25 7.12e-09 GGCATCGCCT TAACCACTCGGCCACTGGGAC AGAATCTCTT chrIX:183345-183668 + 37 7.12e-09 ACGGTGCCTT AACCAACTGGGCCAAGAGACC AGGAATTTGT chrII:226941-227253 - 28 7.12e-09 TCTTTCGCCT TAACCACTCGGCCAAGTTGCC TCGTTTTACA chrXII:784208-784525 - 38 7.12e-09 GGCATCGCCT TAACCACTCGGCCACTGGGAC GGTTGAACAA chrVII:738972-739264 - 54 7.12e-09 ACGGTGCCTT AACCAACTGGGCCAAGAGACC TATTTTTTTC chrIV:1305459-1305769 - 66 7.12e-09 TCTTTCGCCT TAACCACTCGGCCAAGTTGCC TTAATTTGTA chrXV:274506-274863 - 39 7.12e-09 GGCATCGCCT TAACCACTCGGCCACTGGGAC ACGATTACTT chrXVI:819358-819678 - 61 7.12e-09 ACGGTGCCTT AACCAACTGGGCCAAGAGACC ATTCTATTGT chrII:197328-197624 - 68 7.12e-09 ACGGTGCCTT AACCAACTGGGCCAAGAGACC TTGATTACTG chrX:523927-524259 + 30 7.12e-09 TCTTTCGCCT TAACCACTCGGCCAAGTTGCC TTTAATCTCT chrV:86424-86781 - 52 7.12e-09 TCTTTCGCCT TAACCACTCGGCCAAGTTGCC ATAACTCATT chrIV:1150736-1151109 + 49 7.12e-09 GGCATCGCCT TAACCACTCGGCCACTGGGAC TGAAACACTT chrXII:167869-168191 + 25 7.12e-09 TCTTTCGCCT TAACCACTCGGCCAAGTTGCC ATATGACTAT chrIV:437604-437947 - 47 7.12e-09 TCTTTCGCCT TAACCACTCGGCCAAGTTGCC TTACTAATGA chrVIII:132949-133289 + 18 7.12e-09 TCTTTCGCCT TAACCACTCGGCCAAGTTGCC ACTTATTATA chrXIII:259079-259404 + 28 7.12e-09 TCTTTCGCCT TAACCACTCGGCCAAGTTGCC ATACTAACTT chrXV:464355-464623 - 11 1.20e-08 AGCGAGAATC ATACCACTAGACCACACGCCC TTGTTAACTT chrXIII:195988-196310 + 51 1.20e-08 AGCGAGAATC ATACCACTAGACCACACGCCC TTGTGAACTT chrXV:300928-301304 - 31 1.20e-08 AGCGAGAATC ATACCACTAGACCACACGCCC GATCTTTTCT chrXIV:567993-568331 - 3 1.20e-08 AGCGAGAATC ATACCACTAGACCACACGCCC GA chrI:138992-139295 - 59 1.20e-08 AGCGAGAATC ATACCACTAGACCACACGCCC GTACTAATTG chrVIII:388814-389161 + 38 1.20e-08 AGCGAGAATC ATACCACTAGACCACACGCCC ATGTATCTGT chrXV:110892-111122 + 56 1.67e-08 GGTGGGATGA TAACCACTACACTAACCGCCC GGGTTAATTG chrXV:594276-594590 + 22 1.67e-08 GCATAAATTC TAACCACTGAACCACTTGCGC GTTTCAATCA chrVII:779458-779753 - 61 1.67e-08 GGTGGGATGA TAACCACTACACTAACCGCCC GGGGTTAACT chrXIV:96141-96449 + 47 1.67e-08 GGTGGGATGA TAACCACTACACTAACCGCCC ATGTGTTGGA chrXIII:747803-748133 + 25 1.96e-08 GTCAGACGCG TTGCCATTACGCCACGCGAGC TAGTCATATG chrXI:162333-162709 + 67 1.96e-08 GTCAGACGCG TTGCCATTACGCCACGCGAGC TAATATTTGT chrIV:568719-569120 - 13 1.96e-08 GTCAGACGCG TTGCCATTACGCCACGCGAGC TACTATTTGT chrX:355195-355633 - 10 1.96e-08 GTCAGACGCG TTGCCATTACGCCACGCGAGC TACTGTTTG chrII:405707-406094 - 28 1.96e-08 GTCAGACGCG TTGCCATTACGCCACGCGAGC TACTATTTGT chrVII:736162-736532 - 43 1.96e-08 GTCAGACGCG TTGCCATTACGCCACGCGAGC TATTGAAATT chrXIII:131723-132063 + 33 1.96e-08 GTCAGACGCG TTGCCATTACGCCACGCGAGC TAAATTTCTT chrVII:828535-828964 + 75 1.96e-08 GTCAGACGCG TTGCCATTACGCCACGCGAGC TACTG chrV:138501-138894 - 19 1.96e-08 GTCAGACGCG TTGCCATTACGCCACGCGAGC ATTATTTATT chrIV:802652-802872 + 70 2.68e-08 CCGAAAGTGA TAACCACTACACTATAGGACC GACAATTCAT chrIII:168220-168547 + 19 2.68e-08 CCGAAAGTGA TAACCACTACACTATAGGACC AGGACTTCTT chrIV:520823-521107 - 57 2.68e-08 CCGAAAGTGA TAACCACTACACTATAGGACC CTAAAATGGA chrVIII:134165-134529 - 24 2.68e-08 CCGAAAGTGA TAACCACTACACTATAGGACC GGAACTTACT chrXII:448565-448873 + 32 2.68e-08 CCGAAAGTGA TAACCACTACACTATAGGACC GGAACTTCTT chrXVI:775653-775995 + 42 2.68e-08 ATCTGCTGCG CTACCACTGCGCCATACGAGC TTTTGAATTA chrXVI:435784-436130 + 37 2.68e-08 ATCTGCTGCG CTACCACTGCGCCATACGAGC TTTTGTTGTA chrXIII:808129-808470 + 48 2.68e-08 CCGAAAGTGA TAACCACTACACTATAGGACC TTTTTCTTCT chrVII:185590-185917 + 63 3.63e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC TATTTCGTTG chrVI:226598-226876 + 53 3.63e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC ATTTTAATCT chrIV:1352383-1352658 + 48 3.63e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC TATTTCGTTG chrV:135281-135624 + 75 3.63e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC TTTTT chrV:435678-435948 + 41 3.63e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC TCTTATTGTT chrVII:122137-122430 - 36 3.63e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC TAATTCGTTG chrXIII:480504-480852 + 45 3.63e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC TACTTATTGT chrVII:876231-876554 - 52 3.63e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC TATTCTATTA chrIV:1201591-1201918 - 46 3.63e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC TATTTATTTG chrIII:151212-151512 + 24 3.63e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC TCTTTAATTA chrIX:300141-300466 + 27 3.63e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC TATTTCGTTG chrX:414805-415141 - 43 3.63e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC TAATTCGTTG chrIX:174957-175132 - 37 4.21e-08 TGTGGCGCCT TACCAACTTGGCCATAGAAGC TCGTACTTGT chrIII:295377-295592 - 50 4.21e-08 TGTGGCGCCT TACCAACTTGGCCATAGAAGC TTAATTGTAT chrIV:434183-434442 + 54 4.21e-08 TGTGGCGCCT TACCAACTTGGCCATAGAAGC TTCTGATTTG chrXV:113651-113967 - 43 4.21e-08 TGTGGCGCCT TACCAACTTGGCCATAGAAGC TAAATCTCTG chrXV:353955-354269 + 31 4.21e-08 TGTGGCGCCT TACCAACTTGGCCATAGAAGC AGTAAACCGT chrX:59033-59310 + 31 4.21e-08 TGTGGCGCCT TACCAACTTGGCCATAGAAGC TTCTATTTTA chrXIV:104654-104967 - 45 4.21e-08 TGTGGCGCCT TACCAACTTGGCCATAGAAGC TCAGAACTTG chrII:266208-266582 - 33 4.21e-08 TGTGGCGCCT TACCAACTTGGCCATAGAAGC AGTTTTTGAT chrIX:325595-325940 - 31 4.21e-08 TGTGGCGCCT TACCAACTTGGCCATAGAAGC TCGTATTTTA chrVIII:116010-116352 + 28 4.21e-08 TGTGGCGCCT TACCAACTTGGCCATAGAAGC TCTATTAGTG chrXII:592435-592741 + 61 5.61e-08 CTGACGCCTT AAACCACTCGGCCAAACTCCC ATTGTATGTT chrXII:731982-732257 - 21 5.61e-08 CTGACGCCTT AAACCACTCGGCCAAACTCCC ATTGTATGTT chrX:617753-618082 - 52 5.61e-08 CTGACGCCTT AAACCACTCGGCCAAACTCCC ATTGTTTGTT chrXIII:372379-372648 + 35 6.45e-08 CAGATGCCAT AACCGACTAGACCACGAAACC AGGTTTTATT chrV:438556-438837 - 54 6.45e-08 CAGATGCCAT AACCGACTAGACCACGAAACC TAATTTGTTG chrXIII:586560-586879 + 20 6.45e-08 CAGATGCCAT AACCGACTAGACCACGAAACC ATAGTAAGTT chrXV:663678-664019 + 67 6.45e-08 CAGATGCCAT AACCGACTAGACCACGAAACC ACTATTTGTT chrXIII:420523-420819 + 20 6.45e-08 CAGATGCCAT AACCGACTAGACCACGAAACC TGTTATTTGT chrVII:823346-823652 - 33 6.45e-08 CAGATGCCAT AACCGACTAGACCACGAAACC ACTCTTATTG chrV:469288-469612 - 57 6.45e-08 CAGATGCCAT AACCGACTAGACCACGAAACC AATTATTTCT chrXI:308077-308367 + 25 6.45e-08 CAGATGCCAT AACCGACTAGACCACGAAACC ACTTAATTGT chrX:378195-378521 - 52 6.45e-08 CAGATGCCAT AACCGACTAGACCACGAAACC TATTAATTTA chrVII:412213-412528 + 27 6.45e-08 CAGATGCCAT AACCGACTAGACCACGAAACC AGTTTTTTGA chrVII:930903-931173 + 15 7.40e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC TTACTGATTA chrX:531689-532013 - 27 7.40e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC TCACTAATTG chrXVI:572104-572442 - 46 7.40e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC GAAGTATTGT chrIV:83407-83697 - 46 7.40e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC TAAGTGAACT chrXV:282000-282325 - 52 7.40e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC GCTTTCATGT chrVI:180806-181187 + 78 7.40e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC TT chrIV:992678-992972 - 57 7.40e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC TCACAATTGT chrX:396659-396960 + 17 7.40e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC TTACTTTTGA chrV:61772-62099 + 55 7.40e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC TTACTATTTG chrIII:142616-142938 + 24 7.40e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC TAGTAATCTT chrVI:162072-162379 - 53 7.40e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC TTGTTTTCTT chrVII:845479-845833 - 43 7.40e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC TTGTTATTTA chrXV:226521-226849 + 26 7.40e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC TGAATTTCTT chrXVI:860215-860535 - 54 7.40e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC TTGTTATTTA chrVIII:466902-467128 - 25 1.43e-07 GTGCAACGCT CTACCACTAAGCTAAGGAGGC TAAAAATACA chrV:131031-131312 + 12 1.43e-07 CCGAAAGTGA TAACCACTACACTATAAAACC TCTTAATTAT chrII:350668-350955 - 66 1.43e-07 CCGAAAGTGA TAACCACTACACTATAAAACC CTTTTATTGA chrXVI:744136-744463 - 35 1.43e-07 GTGCAACGCT CTACCACTAAGCTAAGGAGGC TTTTACACTG chrVII:661576-661906 - 58 1.43e-07 GTGCAACGCT CTACCACTAAGCTAAGGAGGC AAATTTTTAC chrXIV:726089-726299 + 53 1.62e-07 CTGCCGCCTT AGACCACTCGGCCAACCCTCC AAAGATTTAT chrII:9446-9715 - 53 1.62e-07 CTGCCGCCTT AGACCACTCGGCCAACCCTCC ACGAATTTTC chrIV:519630-519891 - 33 1.62e-07 CTGCCGCCTT AGACCACTCGGCCAACCCTCC GTAAAATCAC chrXI:84050-84328 - 69 1.62e-07 CTGCCGCCTT AGACCACTCGGCCAACCCTCC ATACAAATTT chrXII:962903-963211 + 28 1.62e-07 CTGCCGCCTT AGACCACTCGGCCAACCCTCC GTCGATAATA chrII:347432-347742 - 66 1.62e-07 CTGCCGCCTT AGACCACTCGGCCAACCCTCC GTATAAATGA chrX:424369-424691 + 15 1.62e-07 CTGCCGCCTT AGACCACTCGGCCAACCCTCC ATCTTATTTA chrX:538433-538711 - 33 2.06e-07 GGGAGACGCG TTACCATTACGCCAACGGAAC CAACTTGGTT chrXIII:504725-505084 - 41 2.62e-07 CAGGCGCCTT AGACCGCTCGGCCAAACAACC ACTTATCTGT chrVII:857312-857642 + 44 2.62e-07 CAGGCGCCTT AGACCGCTCGGCCAAACAACC ACTTATTTGT chrXIV:442867-443213 - 16 2.62e-07 CAGGCGCCTT AGACCGCTCGGCCAAACAACC ACTTATTTGT chrIII:90750-91062 - 3 2.62e-07 CAGGCGCCTT AGACCGCTCGGCCAAACAACC AA chrXII:628215-628591 - 30 2.62e-07 CAGGCGCCTT AGACCGCTCGGCCAAACAACC ACTTATTTGT chrVII:422916-423288 - 40 2.62e-07 CAGGCGCCTT AGACCGCTCGGCCAAACAACC ACTTATCTGT chrVII:205354-205665 - 62 2.62e-07 CAGGCGCCTT AGACCGCTCGGCCAAACAACC ACTTATTTGT chrIV:619864-620182 + 48 2.94e-07 CCAGACGCCG TGACCATTGGGCCACGAGGAA CAAGATTTCT chrXII:374184-374518 - 54 2.94e-07 CCAGACGCCG TGACCATTGGGCCACGAGGAA CAAGATTTAT chrXI:490798-491117 - 61 2.94e-07 CCAGACGCCG TGACCATTGGGCCACGAGGAA CAAGAATTAT chrX:233769-234079 - 65 2.94e-07 CCAGACGCCG TGACCATTGGGCCACGAGGAA CAAGAATATA chrXV:340182-340530 + 45 2.94e-07 CCAGACGCCG TGACCATTGGGCCACGAGGAA CAGATCTTGA chrXVI:810549-810862 - 21 4.11e-07 CGCACGCCTT AACCAACTTGGCCATGGAGTC GCAAATAATG chrXIV:632472-632743 - 42 4.11e-07 CGCACGCCTT AACCAACTTGGCCATGGAGTC ACTTTAAATT chrXI:74461-74770 - 59 4.11e-07 CGCACGCCTT AACCAACTTGGCCATGGAGTC TAATTGCTAT chrXIV:102569-102883 - 40 4.11e-07 CGCACGCCTT AACCAACTTGGCCATGGAGTC TTATAATATA chrVI:137339-137702 + 69 4.11e-07 CGCACGCCTT AACCAACTTGGCCATGGAGTC AGTCACTTTT chrVII:730970-731331 - 37 4.11e-07 CGCACGCCTT AACCAACTTGGCCATGGAGTC TTTTTGACTA chrIII:127551-127871 - 55 4.11e-07 CGCACGCCTT AACCAACTTGGCCATGGAGTC ATTTTATCTT chrXV:228161-228484 - 59 4.11e-07 CGCACGCCTT AACCAACTTGGCCATGGAGTC TAATATTTTA chrXII:875234-875536 - 41 5.11e-07 CCGAACGCTC TACCAACTGAGCTAACAAGGA TGAGTTCTTC chrVII:115338-115690 - 24 5.11e-07 CCGAACGCTC TACCAACTGAGCTAACAAGGA TGAGTTCTTC chrXV:438476-438854 - 28 5.11e-07 CCGAACGCTC TACCAACTGAGCTAACAAGGA TGAGTTCTTC chrXVI:769106-769473 + 43 5.11e-07 CCGAACGCTC TACCAACTGAGCTAACAAGGA TGAGTTCTTC chrXIV:374741-374994 - 52 5.68e-07 TCTGGCGCTC TCCCAACTGAGCTAAGTCCGC TTATTTTTCT chrIV:1095304-1095611 + 34 5.68e-07 TCTGGCGCTC TCCCAACTGAGCTAAGTCCGC TAACATAAGA chrXII:459489-460073 - 15 7.73e-07 CGCGTATGGT CACCCACTACACTACTCGGTC AGGCTCTTAC chrII:36234-36542 - 60 8.54e-07 TCTGGCGCTC TCCCAACTGAGCTAAATCCGC TTACAACTAA chrVI:157869-158173 + 16 8.54e-07 TCTGGCGCTC TCCCAACTGAGCTAAATCCGC TTCTATTTAT chrVIII:237749-238099 + 45 8.54e-07 TCTGGCGCTC TCCCAACTGAGCTAAATCCGC TTACTATTTG chrVII:440634-440981 + 30 8.54e-07 TCTGGCGCTC TCCCAACTGAGCTAAATCCGC ATATATTTTA chrXVI:560049-560454 + 68 8.54e-07 TCTGGCGCTC TCCCAACTGAGCTAAATCCGC TCAATTTCTA chrVIII:358376-358741 + 41 8.54e-07 TCTGGCGCTC TCCCAACTGAGCTAAATCCGC TTACTATTTG chrXVI:622470-622799 + 27 8.54e-07 TCTGGCGCTC TCCCAACTGAGCTAAATCCGC ATATCAGAAT chrXIV:631768-632041 + 43 1.04e-06 AGCGAGAATC ATACCTCTAGACCACACGCCC GGTAGAAGTT chrIII:123477-123787 + 46 1.04e-06 AGCGAGAATC ATACCTCTAGACCACACGCCC TCCTTTGAAA chrII:326710-327038 + 21 1.04e-06 GCGACGTCTT GAACCACTGGACCATTGGACC CGGAACTCGA chrXV:976354-976549 - 20 2.35e-06 ACTGACGCTC TTCCTACTGAGCTACTGAAGC GCACAAAATA chrXIII:572752-573124 + 47 2.35e-06 ACTGACGCTC TTCCTACTGAGCTACTGAAGC TGTCTGTTAT chrX:422769-423092 - 57 2.35e-06 ACTGACGCTC TTCCTACTGAGCTACTGAAGC ATACAAAGGA chrIV:1175665-1175998 - 48 2.35e-06 ACTGACGCTC TTCCTACTGAGCTACTGAAGC TTTGTTTTGT chrX:390942-391293 + 28 2.35e-06 ACTGACGCTC TTCCTACTGAGCTACTGAAGC ACTATTTCTT chrVII:319739-319918 - 3 2.77e-06 CGATGTGTAC TAACCACTATACTAAGATGGC TA chrXII:818484-818770 - 32 2.77e-06 GAATGCATGC TAACCATTGCACTAGAGGAGC ATAATAAATT chrXIII:362931-363224 - 37 2.77e-06 CGATGTGTAC TAACCACTATACTAAGATGGC AAACTTGGAT chrVIII:62602-62923 - 43 2.77e-06 CGATGTGTAC TAACCACTATACTAAGATGGC ATATGATTTT chrX:541391-541679 - 23 3.54e-06 GCGCCCATTC TGACCATTAAACTATCACGGA TTTTCTTTCT chrXIII:463413-463681 - 57 3.54e-06 GCGCCCATTC TGACCATTAAACTATCACGGA CAAATTTCTG chrXI:513270-513542 + 27 3.54e-06 GCGCCCATTC TGACCATTAAACTATCACGGA ACGTTATTTG chrVII:531476-531780 - 32 3.54e-06 GCGCCCATTC TGACCATTAAACTATCACGGA AGTAACTCGA chrXII:426964-427290 - 55 3.54e-06 GCGCCCATTC TGACCATTAAACTATCACGGA TAAGAAACAC chrXV:571788-572118 - 55 3.54e-06 GCGCCCATTC TGACCATTAAACTATCACGGA TTTTAATTGT chrX:204581-204914 - 38 3.54e-06 GCGCCCATTC TGACCATTAAACTATCACGGA TTTTTATGTT chrIX:324226-324549 + 17 3.54e-06 GCGCCCATTC TGACCATTAAACTATCACGGA ATATTAGATG chrXII:793743-794056 - 69 3.54e-06 GCGCCCATTC TGACCATTAAACTATCACGGA TTATATTACA chrX:374300-374741 + 5 3.54e-06 ATTC TGACCATTAAACTATCACGGA AGAAACAAAG chrVII:544485-544811 + 30 3.54e-06 GCGCCCATTC TGACCATTAAACTATCACGGA AGAAATATCT chrIX:336268-336583 + 25 3.54e-06 GCGCCCATTC TGACCATTAAACTATCACGGA TTTGTTTCTA chrXVI:56101-56372 + 68 4.47e-06 GTCGAAAGCT CTACCATTGAGCCACCGCTTC AACTATTGTT chrVIII:475609-475924 + 42 4.47e-06 GGCAACGTGA TAGCCGCTACACTATTGGAAC AGACTTTTAA chrIX:197429-197737 - 59 4.47e-06 CGTGATGTGA TAGCCGTTACACTACATCGGA TTTGATTAGC chrIV:1075393-1075705 + 25 4.47e-06 GGCAACGTGA TAGCCGCTACACTATTGGAAC AATATTACGG chrIV:1017098-1017454 + 32 4.47e-06 CGTGATGTGA TAGCCGTTACACTACATCGGA TTGTACCTTG chrVII:878623-878968 + 50 4.47e-06 GTCGAAAGCT CTACCATTGAGCCACCGCTTC ATCTTGAAAT chrX:415868-416202 + 31 4.47e-06 GTCGAAAGCT CTACCATTGAGCCACCGCTTC AACTTTTGTT chrVII:287267-287622 + 41 4.47e-06 GTCGAAAGCT CTACCATTGAGCCACCGCTTC ATCTTGAAAT chrXIII:379242-379573 + 31 4.47e-06 GTCGAAAGCT CTACCATTGAGCCACCGCTTC AACTTTTATT chrXI:302748-303116 - 36 4.47e-06 GTCGAAAGCT CTACCATTGAGCCACCGCTTC ATCTTGGAAT chrXV:710041-710326 - 68 5.59e-06 GCCCTGCGCG CTTCCACTGCGCCACGGCGCT GCTAATTCTT chrX:517748-518041 + 20 5.59e-06 GCCCTGCGCG CTTCCACTGCGCCACGGCGCT TAACTTTTAT chrIII:149753-150081 - 53 5.59e-06 GCCCTGCGCG CTTCCACTGCGCCACGGCGCT CAACATTACA chrV:99974-100298 - 47 5.59e-06 GCCCTGCGCG CTTCCACTGCGCCACGGCGCT TAGCCAACTT chrV:117981-118210 + 41 6.46e-06 CACCACAGCG TACCATGTGCGCCACGAGGCC TCAAACGTAA chrXIII:168701-168988 - 1 6.46e-06 TTGCGCCTTA AACCAACTTGGCTACCGAGAG chrX:354132-354415 - 21 6.46e-06 TTGCGCCTTA AACCAACTTGGCTACCGAGAG TGATAAATGA chrXV:288033-288344 - 54 6.46e-06 TTGCGCCTTA AACCAACTTGGCTACCGAGAG AAGCTATTTT chrVI:167285-167595 - 47 6.46e-06 TTGCGCCTTA AACCAACTTGGCTACCGAGAG TCGTTTTTGT chrXIII:837759-838093 - 52 6.46e-06 TTGCGCCTTA AACCAACTTGGCTACCGAGAG TCAATTAACT chrVI:210522-210868 + 42 6.46e-06 TTGCGCCTTA AACCAACTTGGCTACCGAGAG TCGTTTTTGT chrX:542858-543212 + 39 6.46e-06 TTGCGCCTTA AACCAACTTGGCTACCGAGAG TATTTAATTG chrIII:82421-82588 + 59 7.44e-06 CGTGATGTGA TAGCCGTTACACTATATCGGA TAACAAATTA chrV:354782-355060 - 63 7.44e-06 CGTGATGTGA TAGCCGTTACACTATATCGGA TTACAATACA chrV:487244-487526 + 47 7.44e-06 CGTGATGTGA TAGCCGTTACACTATATCGGA TTAAATTCAT chrIX:370250-370560 - 62 7.44e-06 CGTGATGTGA TAGCCGTTACACTATATCGGA TTATAATCTA chrVII:328419-328836 - 6 7.44e-06 CGTGATGTGA TAGCCGTTACACTATATCGGA CAATA chrXII:797011-797333 - 56 7.44e-06 CGTGATGTGA TAGCCGTTACACTATATCGGA CGACAACTAC chrXI:140916-141239 + 42 7.44e-06 CGTGATGTGA TAGCCGTTACACTATATCGGA TTACAAAGGA chrX:115843-116175 + 31 7.44e-06 CGTGATGTGA TAGCCGTTACACTATATCGGA TTATAAACGG chrV:176936-177275 - 44 7.44e-06 CGTGATGTGA TAGCCGTTACACTATATCGGA TCAAAGTAGG chrII:645006-645328 - 50 7.44e-06 CGTGATGTGA TAGCCGTTACACTATATCGGA TAATAACTTA chrVII:541686-542082 - 16 7.44e-06 CGTGATGTGA TAGCCGTTACACTATATCGGA TGGTAATCTG chrXIII:290645-290955 - 51 7.44e-06 CGTGATGTGA TAGCCGTTACACTATATCGGA TTATATTTCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAMCCACTRVRCYAHVNVVSC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:410229-410500 1.2e-09 64_[-1]_15 chrXIII:321058-321361 1.2e-09 39_[+1]_40 chrXII:656861-657145 1.2e-09 32_[+1]_47 chrXI:219738-220030 1.2e-09 60_[-1]_19 chrX:197220-197530 1.2e-09 39_[+1]_40 chrVII:774180-774536 1.2e-09 40_[-1]_39 chrXII:214781-215083 2.8e-09 52_[+1]_27 chrI:166143-166424 2.8e-09 33_[-1]_46 chrVII:794268-794585 2.8e-09 40_[-1]_39 chrV:311916-312245 2.8e-09 44_[+1]_35 chrIV:884211-884584 3.4e-09 13_[-1]_66 chrXII:605203-605580 3.4e-09 70_[+1]_9 chrXI:46663-46960 5.9e-09 24_[+1]_55 chrV:288354-288681 5.9e-09 36_[+1]_43 chrXVI:689402-689749 5.9e-09 39_[-1]_40 chrIX:248663-249029 5.9e-09 53_[-1]_26 chrIII:227780-228131 5.9e-09 36_[-1]_43 chrXII:1052001-1052229 7.1e-09 58_[+1]_21 chrXIV:569795-569997 7.1e-09 73_[+1]_6 chrV:551221-551465 7.1e-09 44_[+1]_35 chrV:443120-443376 7.1e-09 56_[+1]_23 chrXVI:880197-880527 7.1e-09 36_[+1]_43 chrXII:734646-734955 7.1e-09 51_[-1]_28 chrVI:191475-191762 7.1e-09 24_[+1]_55 chrIX:183345-183668 7.1e-09 36_[+1]_43 chrII:226941-227253 7.1e-09 27_[-1]_52 chrXII:784208-784525 7.1e-09 37_[-1]_42 chrVII:738972-739264 7.1e-09 53_[-1]_26 chrIV:1305459-1305769 7.1e-09 65_[-1]_14 chrXV:274506-274863 7.1e-09 38_[-1]_41 chrXVI:819358-819678 7.1e-09 60_[-1]_19 chrII:197328-197624 7.1e-09 67_[-1]_12 chrX:523927-524259 7.1e-09 29_[+1]_50 chrV:86424-86781 7.1e-09 51_[-1]_28 chrIV:1150736-1151109 7.1e-09 48_[+1]_31 chrXII:167869-168191 7.1e-09 24_[+1]_55 chrIV:437604-437947 7.1e-09 46_[-1]_33 chrVIII:132949-133289 7.1e-09 17_[+1]_62 chrXIII:259079-259404 7.1e-09 27_[+1]_52 chrXV:464355-464623 1.2e-08 10_[-1]_69 chrXIII:195988-196310 1.2e-08 50_[+1]_29 chrXV:300928-301304 1.2e-08 30_[-1]_49 chrXIV:567993-568331 1.2e-08 2_[-1]_77 chrI:138992-139295 1.2e-08 58_[-1]_21 chrVIII:388814-389161 1.2e-08 37_[+1]_42 chrXV:110892-111122 1.7e-08 55_[+1]_24 chrXV:594276-594590 1.7e-08 21_[+1]_58 chrVII:779458-779753 1.7e-08 60_[-1]_19 chrXIV:96141-96449 1.7e-08 46_[+1]_33 chrXIII:747803-748133 2e-08 24_[+1]_55 chrXI:162333-162709 2e-08 66_[+1]_13 chrIV:568719-569120 2e-08 12_[-1]_67 chrX:355195-355633 2e-08 9_[-1]_70 chrII:405707-406094 2e-08 27_[-1]_52 chrVII:736162-736532 2e-08 42_[-1]_37 chrXIII:131723-132063 2e-08 32_[+1]_47 chrVII:828535-828964 2e-08 74_[+1]_5 chrV:138501-138894 2e-08 18_[-1]_61 chrIV:802652-802872 2.7e-08 69_[+1]_10 chrIII:168220-168547 2.7e-08 18_[+1]_61 chrIV:520823-521107 2.7e-08 56_[-1]_23 chrVIII:134165-134529 2.7e-08 23_[-1]_56 chrXII:448565-448873 2.7e-08 31_[+1]_48 chrXVI:775653-775995 2.7e-08 41_[+1]_38 chrXVI:435784-436130 2.7e-08 36_[+1]_43 chrXIII:808129-808470 2.7e-08 47_[+1]_32 chrVII:185590-185917 3.6e-08 62_[+1]_17 chrVI:226598-226876 3.6e-08 52_[+1]_27 chrIV:1352383-1352658 3.6e-08 47_[+1]_32 chrV:135281-135624 3.6e-08 74_[+1]_5 chrV:435678-435948 3.6e-08 40_[+1]_39 chrVII:122137-122430 3.6e-08 35_[-1]_44 chrXIII:480504-480852 3.6e-08 44_[+1]_35 chrVII:876231-876554 3.6e-08 51_[-1]_28 chrIV:1201591-1201918 3.6e-08 45_[-1]_34 chrIII:151212-151512 3.6e-08 23_[+1]_56 chrIX:300141-300466 3.6e-08 26_[+1]_53 chrX:414805-415141 3.6e-08 42_[-1]_37 chrIX:174957-175132 4.2e-08 36_[-1]_43 chrIII:295377-295592 4.2e-08 49_[-1]_30 chrIV:434183-434442 4.2e-08 53_[+1]_26 chrXV:113651-113967 4.2e-08 42_[-1]_37 chrXV:353955-354269 4.2e-08 30_[+1]_49 chrX:59033-59310 4.2e-08 30_[+1]_49 chrXIV:104654-104967 4.2e-08 44_[-1]_35 chrII:266208-266582 4.2e-08 32_[-1]_47 chrIX:325595-325940 4.2e-08 30_[-1]_49 chrVIII:116010-116352 4.2e-08 27_[+1]_52 chrXII:592435-592741 5.6e-08 60_[+1]_19 chrXII:731982-732257 5.6e-08 20_[-1]_59 chrX:617753-618082 5.6e-08 51_[-1]_28 chrXIII:372379-372648 6.5e-08 34_[+1]_45 chrV:438556-438837 6.5e-08 53_[-1]_26 chrXIII:586560-586879 6.5e-08 19_[+1]_60 chrXV:663678-664019 6.5e-08 66_[+1]_13 chrXIII:420523-420819 6.5e-08 19_[+1]_60 chrVII:823346-823652 6.5e-08 32_[-1]_47 chrV:469288-469612 6.5e-08 56_[-1]_23 chrXI:308077-308367 6.5e-08 24_[+1]_55 chrX:378195-378521 6.5e-08 51_[-1]_28 chrVII:412213-412528 6.5e-08 26_[+1]_53 chrVII:930903-931173 7.4e-08 14_[+1]_65 chrX:531689-532013 7.4e-08 26_[-1]_53 chrXVI:572104-572442 7.4e-08 45_[-1]_34 chrIV:83407-83697 7.4e-08 45_[-1]_34 chrXV:282000-282325 7.4e-08 51_[-1]_28 chrVI:180806-181187 7.4e-08 77_[+1]_2 chrIV:992678-992972 7.4e-08 56_[-1]_23 chrX:396659-396960 7.4e-08 16_[+1]_63 chrV:61772-62099 7.4e-08 54_[+1]_25 chrIII:142616-142938 7.4e-08 23_[+1]_56 chrVI:162072-162379 7.4e-08 52_[-1]_27 chrVII:845479-845833 7.4e-08 42_[-1]_37 chrXV:226521-226849 7.4e-08 25_[+1]_54 chrXVI:860215-860535 7.4e-08 53_[-1]_26 chrVIII:466902-467128 1.4e-07 24_[-1]_55 chrV:131031-131312 1.4e-07 11_[+1]_68 chrII:350668-350955 1.4e-07 65_[-1]_14 chrXVI:744136-744463 1.4e-07 34_[-1]_45 chrVII:661576-661906 1.4e-07 57_[-1]_22 chrXIV:726089-726299 1.6e-07 52_[+1]_27 chrII:9446-9715 1.6e-07 52_[-1]_27 chrIV:519630-519891 1.6e-07 32_[-1]_47 chrXI:84050-84328 1.6e-07 68_[-1]_11 chrXII:962903-963211 1.6e-07 27_[+1]_52 chrII:347432-347742 1.6e-07 65_[-1]_14 chrX:424369-424691 1.6e-07 14_[+1]_65 chrX:538433-538711 2.1e-07 32_[-1]_47 chrXIII:504725-505084 2.6e-07 40_[-1]_39 chrVII:857312-857642 2.6e-07 43_[+1]_36 chrXIV:442867-443213 2.6e-07 15_[-1]_64 chrIII:90750-91062 2.6e-07 2_[-1]_77 chrXII:628215-628591 2.6e-07 29_[-1]_50 chrVII:422916-423288 2.6e-07 39_[-1]_40 chrVII:205354-205665 2.6e-07 61_[-1]_18 chrIV:619864-620182 2.9e-07 47_[+1]_32 chrXII:374184-374518 2.9e-07 53_[-1]_26 chrXI:490798-491117 2.9e-07 60_[-1]_19 chrX:233769-234079 2.9e-07 64_[-1]_15 chrXV:340182-340530 2.9e-07 44_[+1]_35 chrXVI:810549-810862 4.1e-07 20_[-1]_59 chrXIV:632472-632743 4.1e-07 41_[-1]_38 chrXI:74461-74770 4.1e-07 58_[-1]_21 chrXIV:102569-102883 4.1e-07 39_[-1]_40 chrVI:137339-137702 4.1e-07 68_[+1]_11 chrVII:730970-731331 4.1e-07 36_[-1]_43 chrIII:127551-127871 4.1e-07 54_[-1]_25 chrXV:228161-228484 4.1e-07 58_[-1]_21 chrXII:875234-875536 5.1e-07 40_[-1]_39 chrVII:115338-115690 5.1e-07 23_[-1]_56 chrXV:438476-438854 5.1e-07 27_[-1]_52 chrXVI:769106-769473 5.1e-07 42_[+1]_37 chrXIV:374741-374994 5.7e-07 51_[-1]_28 chrIV:1095304-1095611 5.7e-07 33_[+1]_46 chrXII:459489-460073 7.7e-07 14_[-1]_65 chrII:36234-36542 8.5e-07 59_[-1]_20 chrVI:157869-158173 8.5e-07 15_[+1]_64 chrVIII:237749-238099 8.5e-07 44_[+1]_35 chrVII:440634-440981 8.5e-07 29_[+1]_50 chrXVI:560049-560454 8.5e-07 67_[+1]_12 chrVIII:358376-358741 8.5e-07 40_[+1]_39 chrXVI:622470-622799 8.5e-07 26_[+1]_53 chrXIV:631768-632041 1e-06 42_[+1]_37 chrIII:123477-123787 1e-06 45_[+1]_34 chrII:326710-327038 1e-06 20_[+1]_59 chrXV:976354-976549 2.3e-06 19_[-1]_60 chrXIII:572752-573124 2.3e-06 46_[+1]_33 chrX:422769-423092 2.3e-06 56_[-1]_23 chrIV:1175665-1175998 2.3e-06 47_[-1]_32 chrX:390942-391293 2.3e-06 27_[+1]_52 chrVII:319739-319918 2.8e-06 2_[-1]_77 chrXII:818484-818770 2.8e-06 31_[-1]_48 chrXIII:362931-363224 2.8e-06 36_[-1]_43 chrVIII:62602-62923 2.8e-06 42_[-1]_37 chrX:541391-541679 3.5e-06 22_[-1]_57 chrXIII:463413-463681 3.5e-06 56_[-1]_23 chrXI:513270-513542 3.5e-06 26_[+1]_53 chrVII:531476-531780 3.5e-06 31_[-1]_48 chrXII:426964-427290 3.5e-06 54_[-1]_25 chrXV:571788-572118 3.5e-06 54_[-1]_25 chrX:204581-204914 3.5e-06 37_[-1]_42 chrIX:324226-324549 3.5e-06 16_[+1]_63 chrXII:793743-794056 3.5e-06 68_[-1]_11 chrX:374300-374741 3.5e-06 4_[+1]_75 chrVII:544485-544811 3.5e-06 29_[+1]_50 chrIX:336268-336583 3.5e-06 24_[+1]_55 chrXVI:56101-56372 4.5e-06 67_[+1]_12 chrVIII:475609-475924 4.5e-06 41_[+1]_38 chrIX:197429-197737 4.5e-06 58_[-1]_21 chrIV:1075393-1075705 4.5e-06 24_[+1]_55 chrIV:1017098-1017454 4.5e-06 31_[+1]_48 chrVII:878623-878968 4.5e-06 49_[+1]_30 chrX:415868-416202 4.5e-06 30_[+1]_49 chrVII:287267-287622 4.5e-06 40_[+1]_39 chrXIII:379242-379573 4.5e-06 30_[+1]_49 chrXI:302748-303116 4.5e-06 35_[-1]_44 chrXV:710041-710326 5.6e-06 67_[-1]_12 chrX:517748-518041 5.6e-06 19_[+1]_60 chrIII:149753-150081 5.6e-06 52_[-1]_27 chrV:99974-100298 5.6e-06 46_[-1]_33 chrV:117981-118210 6.5e-06 40_[+1]_39 chrXIII:168701-168988 6.5e-06 [-1]_79 chrX:354132-354415 6.5e-06 20_[-1]_59 chrXV:288033-288344 6.5e-06 53_[-1]_26 chrVI:167285-167595 6.5e-06 46_[-1]_33 chrXIII:837759-838093 6.5e-06 51_[-1]_28 chrVI:210522-210868 6.5e-06 41_[+1]_38 chrX:542858-543212 6.5e-06 38_[+1]_41 chrIII:82421-82588 7.4e-06 58_[+1]_21 chrV:354782-355060 7.4e-06 62_[-1]_17 chrV:487244-487526 7.4e-06 46_[+1]_33 chrIX:370250-370560 7.4e-06 61_[-1]_18 chrVII:328419-328836 7.4e-06 5_[-1]_74 chrXII:797011-797333 7.4e-06 55_[-1]_24 chrXI:140916-141239 7.4e-06 41_[+1]_38 chrX:115843-116175 7.4e-06 30_[+1]_49 chrV:176936-177275 7.4e-06 43_[-1]_36 chrII:645006-645328 7.4e-06 49_[-1]_30 chrVII:541686-542082 7.4e-06 15_[-1]_64 chrXIII:290645-290955 7.4e-06 50_[-1]_29 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAMCCACTRVRCYAHVNVVSC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TAMCCACTRVRCYAHVNVVSC width=21 seqs=220 chrIV:410229-410500 ( 65) TACCGACTACGCCACACGCCC 1 chrXIII:321058-321361 ( 40) TACCGACTACGCCACACGCCC 1 chrXII:656861-657145 ( 33) TACCGACTACGCCACACGCCC 1 chrXI:219738-220030 ( 61) TACCGACTACGCCACACGCCC 1 chrX:197220-197530 ( 40) TACCGACTACGCCACACGCCC 1 chrVII:774180-774536 ( 41) TACCGACTACGCCACACGCCC 1 chrXII:214781-215083 ( 53) TACCAACTGCGCCATGTGCCC 1 chrI:166143-166424 ( 34) TACCAACTGCGCCATGTGCCC 1 chrVII:794268-794585 ( 41) TACCAACTGCGCCATGTGCCC 1 chrV:311916-312245 ( 45) TACCAACTGCGCCATGTGCCC 1 chrIV:884211-884584 ( 14) TAACCACTGAGCTACACGAGC 1 chrXII:605203-605580 ( 71) TAACCACTGAGCTACACGAGC 1 chrXI:46663-46960 ( 25) TTACCACTTGGCCAAAAGGGC 1 chrV:288354-288681 ( 37) TAACCACTCGGCCATAGTGCC 1 chrXVI:689402-689749 ( 40) TAACCACTCGGCCATAGTGCC 1 chrIX:248663-249029 ( 54) TAACCACTCGGCCATAGTGCC 1 chrIII:227780-228131 ( 37) TAACCACTCGGCCATAGTGCC 1 chrXII:1052001-1052229 ( 59) AACCAACTGGGCCAAGAGACC 1 chrXIV:569795-569997 ( 74) AACCAACTGGGCCAAGAGACC 1 chrV:551221-551465 ( 45) AACCAACTGGGCCAAGAGACC 1 chrV:443120-443376 ( 57) AACCAACTGGGCCAAGAGACC 1 chrXVI:880197-880527 ( 37) AACCAACTGGGCCAAGAGACC 1 chrXII:734646-734955 ( 52) AACCAACTGGGCCAAGAGACC 1 chrVI:191475-191762 ( 25) TAACCACTCGGCCACTGGGAC 1 chrIX:183345-183668 ( 37) AACCAACTGGGCCAAGAGACC 1 chrII:226941-227253 ( 28) TAACCACTCGGCCAAGTTGCC 1 chrXII:784208-784525 ( 38) TAACCACTCGGCCACTGGGAC 1 chrVII:738972-739264 ( 54) AACCAACTGGGCCAAGAGACC 1 chrIV:1305459-1305769 ( 66) TAACCACTCGGCCAAGTTGCC 1 chrXV:274506-274863 ( 39) TAACCACTCGGCCACTGGGAC 1 chrXVI:819358-819678 ( 61) AACCAACTGGGCCAAGAGACC 1 chrII:197328-197624 ( 68) AACCAACTGGGCCAAGAGACC 1 chrX:523927-524259 ( 30) TAACCACTCGGCCAAGTTGCC 1 chrV:86424-86781 ( 52) TAACCACTCGGCCAAGTTGCC 1 chrIV:1150736-1151109 ( 49) TAACCACTCGGCCACTGGGAC 1 chrXII:167869-168191 ( 25) TAACCACTCGGCCAAGTTGCC 1 chrIV:437604-437947 ( 47) TAACCACTCGGCCAAGTTGCC 1 chrVIII:132949-133289 ( 18) TAACCACTCGGCCAAGTTGCC 1 chrXIII:259079-259404 ( 28) TAACCACTCGGCCAAGTTGCC 1 chrXV:464355-464623 ( 11) ATACCACTAGACCACACGCCC 1 chrXIII:195988-196310 ( 51) ATACCACTAGACCACACGCCC 1 chrXV:300928-301304 ( 31) ATACCACTAGACCACACGCCC 1 chrXIV:567993-568331 ( 3) ATACCACTAGACCACACGCCC 1 chrI:138992-139295 ( 59) ATACCACTAGACCACACGCCC 1 chrVIII:388814-389161 ( 38) ATACCACTAGACCACACGCCC 1 chrXV:110892-111122 ( 56) TAACCACTACACTAACCGCCC 1 chrXV:594276-594590 ( 22) TAACCACTGAACCACTTGCGC 1 chrVII:779458-779753 ( 61) TAACCACTACACTAACCGCCC 1 chrXIV:96141-96449 ( 47) TAACCACTACACTAACCGCCC 1 chrXIII:747803-748133 ( 25) TTGCCATTACGCCACGCGAGC 1 chrXI:162333-162709 ( 67) TTGCCATTACGCCACGCGAGC 1 chrIV:568719-569120 ( 13) TTGCCATTACGCCACGCGAGC 1 chrX:355195-355633 ( 10) TTGCCATTACGCCACGCGAGC 1 chrII:405707-406094 ( 28) TTGCCATTACGCCACGCGAGC 1 chrVII:736162-736532 ( 43) TTGCCATTACGCCACGCGAGC 1 chrXIII:131723-132063 ( 33) TTGCCATTACGCCACGCGAGC 1 chrVII:828535-828964 ( 75) TTGCCATTACGCCACGCGAGC 1 chrV:138501-138894 ( 19) TTGCCATTACGCCACGCGAGC 1 chrIV:802652-802872 ( 70) TAACCACTACACTATAGGACC 1 chrIII:168220-168547 ( 19) TAACCACTACACTATAGGACC 1 chrIV:520823-521107 ( 57) TAACCACTACACTATAGGACC 1 chrVIII:134165-134529 ( 24) TAACCACTACACTATAGGACC 1 chrXII:448565-448873 ( 32) TAACCACTACACTATAGGACC 1 chrXVI:775653-775995 ( 42) CTACCACTGCGCCATACGAGC 1 chrXVI:435784-436130 ( 37) CTACCACTGCGCCATACGAGC 1 chrXIII:808129-808470 ( 48) TAACCACTACACTATAGGACC 1 chrVII:185590-185917 ( 63) TACCGATTGCGCCAACAAGGC 1 chrVI:226598-226876 ( 53) TACCGATTGCGCCAACAAGGC 1 chrIV:1352383-1352658 ( 48) TACCGATTGCGCCAACAAGGC 1 chrV:135281-135624 ( 75) TACCGATTGCGCCAACAAGGC 1 chrV:435678-435948 ( 41) TACCGATTGCGCCAACAAGGC 1 chrVII:122137-122430 ( 36) TACCGATTGCGCCAACAAGGC 1 chrXIII:480504-480852 ( 45) TACCGATTGCGCCAACAAGGC 1 chrVII:876231-876554 ( 52) TACCGATTGCGCCAACAAGGC 1 chrIV:1201591-1201918 ( 46) TACCGATTGCGCCAACAAGGC 1 chrIII:151212-151512 ( 24) TACCGATTGCGCCAACAAGGC 1 chrIX:300141-300466 ( 27) TACCGATTGCGCCAACAAGGC 1 chrX:414805-415141 ( 43) TACCGATTGCGCCAACAAGGC 1 chrIX:174957-175132 ( 37) TACCAACTTGGCCATAGAAGC 1 chrIII:295377-295592 ( 50) TACCAACTTGGCCATAGAAGC 1 chrIV:434183-434442 ( 54) TACCAACTTGGCCATAGAAGC 1 chrXV:113651-113967 ( 43) TACCAACTTGGCCATAGAAGC 1 chrXV:353955-354269 ( 31) TACCAACTTGGCCATAGAAGC 1 chrX:59033-59310 ( 31) TACCAACTTGGCCATAGAAGC 1 chrXIV:104654-104967 ( 45) TACCAACTTGGCCATAGAAGC 1 chrII:266208-266582 ( 33) TACCAACTTGGCCATAGAAGC 1 chrIX:325595-325940 ( 31) TACCAACTTGGCCATAGAAGC 1 chrVIII:116010-116352 ( 28) TACCAACTTGGCCATAGAAGC 1 chrXII:592435-592741 ( 61) AAACCACTCGGCCAAACTCCC 1 chrXII:731982-732257 ( 21) AAACCACTCGGCCAAACTCCC 1 chrX:617753-618082 ( 52) AAACCACTCGGCCAAACTCCC 1 chrXIII:372379-372648 ( 35) AACCGACTAGACCACGAAACC 1 chrV:438556-438837 ( 54) AACCGACTAGACCACGAAACC 1 chrXIII:586560-586879 ( 20) AACCGACTAGACCACGAAACC 1 chrXV:663678-664019 ( 67) AACCGACTAGACCACGAAACC 1 chrXIII:420523-420819 ( 20) AACCGACTAGACCACGAAACC 1 chrVII:823346-823652 ( 33) AACCGACTAGACCACGAAACC 1 chrV:469288-469612 ( 57) AACCGACTAGACCACGAAACC 1 chrXI:308077-308367 ( 25) AACCGACTAGACCACGAAACC 1 chrX:378195-378521 ( 52) AACCGACTAGACCACGAAACC 1 chrVII:412213-412528 ( 27) AACCGACTAGACCACGAAACC 1 chrVII:930903-931173 ( 15) TTACCACTAAACCACTTGCGC 1 chrX:531689-532013 ( 27) TTACCACTAAACCACTTGCGC 1 chrXVI:572104-572442 ( 46) TTACCACTAAACCACTTGCGC 1 chrIV:83407-83697 ( 46) TTACCACTAAACCACTTGCGC 1 chrXV:282000-282325 ( 52) TTACCACTAAACCACTTGCGC 1 chrVI:180806-181187 ( 78) TTACCACTAAACCACTTGCGC 1 chrIV:992678-992972 ( 57) TTACCACTAAACCACTTGCGC 1 chrX:396659-396960 ( 17) TTACCACTAAACCACTTGCGC 1 chrV:61772-62099 ( 55) TTACCACTAAACCACTTGCGC 1 chrIII:142616-142938 ( 24) TTACCACTAAACCACTTGCGC 1 chrVI:162072-162379 ( 53) TTACCACTAAACCACTTGCGC 1 chrVII:845479-845833 ( 43) TTACCACTAAACCACTTGCGC 1 chrXV:226521-226849 ( 26) TTACCACTAAACCACTTGCGC 1 chrXVI:860215-860535 ( 54) TTACCACTAAACCACTTGCGC 1 chrVIII:466902-467128 ( 25) CTACCACTAAGCTAAGGAGGC 1 chrV:131031-131312 ( 12) TAACCACTACACTATAAAACC 1 chrII:350668-350955 ( 66) TAACCACTACACTATAAAACC 1 chrXVI:744136-744463 ( 35) CTACCACTAAGCTAAGGAGGC 1 chrVII:661576-661906 ( 58) CTACCACTAAGCTAAGGAGGC 1 chrXIV:726089-726299 ( 53) AGACCACTCGGCCAACCCTCC 1 chrII:9446-9715 ( 53) AGACCACTCGGCCAACCCTCC 1 chrIV:519630-519891 ( 33) AGACCACTCGGCCAACCCTCC 1 chrXI:84050-84328 ( 69) AGACCACTCGGCCAACCCTCC 1 chrXII:962903-963211 ( 28) AGACCACTCGGCCAACCCTCC 1 chrII:347432-347742 ( 66) AGACCACTCGGCCAACCCTCC 1 chrX:424369-424691 ( 15) AGACCACTCGGCCAACCCTCC 1 chrX:538433-538711 ( 33) TTACCATTACGCCAACGGAAC 1 chrXIII:504725-505084 ( 41) AGACCGCTCGGCCAAACAACC 1 chrVII:857312-857642 ( 44) AGACCGCTCGGCCAAACAACC 1 chrXIV:442867-443213 ( 16) AGACCGCTCGGCCAAACAACC 1 chrIII:90750-91062 ( 3) AGACCGCTCGGCCAAACAACC 1 chrXII:628215-628591 ( 30) AGACCGCTCGGCCAAACAACC 1 chrVII:422916-423288 ( 40) AGACCGCTCGGCCAAACAACC 1 chrVII:205354-205665 ( 62) AGACCGCTCGGCCAAACAACC 1 chrIV:619864-620182 ( 48) TGACCATTGGGCCACGAGGAA 1 chrXII:374184-374518 ( 54) TGACCATTGGGCCACGAGGAA 1 chrXI:490798-491117 ( 61) TGACCATTGGGCCACGAGGAA 1 chrX:233769-234079 ( 65) TGACCATTGGGCCACGAGGAA 1 chrXV:340182-340530 ( 45) TGACCATTGGGCCACGAGGAA 1 chrXVI:810549-810862 ( 21) AACCAACTTGGCCATGGAGTC 1 chrXIV:632472-632743 ( 42) AACCAACTTGGCCATGGAGTC 1 chrXI:74461-74770 ( 59) AACCAACTTGGCCATGGAGTC 1 chrXIV:102569-102883 ( 40) AACCAACTTGGCCATGGAGTC 1 chrVI:137339-137702 ( 69) AACCAACTTGGCCATGGAGTC 1 chrVII:730970-731331 ( 37) AACCAACTTGGCCATGGAGTC 1 chrIII:127551-127871 ( 55) AACCAACTTGGCCATGGAGTC 1 chrXV:228161-228484 ( 59) AACCAACTTGGCCATGGAGTC 1 chrXII:875234-875536 ( 41) TACCAACTGAGCTAACAAGGA 1 chrVII:115338-115690 ( 24) TACCAACTGAGCTAACAAGGA 1 chrXV:438476-438854 ( 28) TACCAACTGAGCTAACAAGGA 1 chrXVI:769106-769473 ( 43) TACCAACTGAGCTAACAAGGA 1 chrXIV:374741-374994 ( 52) TCCCAACTGAGCTAAGTCCGC 1 chrIV:1095304-1095611 ( 34) TCCCAACTGAGCTAAGTCCGC 1 chrXII:459489-460073 ( 15) CACCCACTACACTACTCGGTC 1 chrII:36234-36542 ( 60) TCCCAACTGAGCTAAATCCGC 1 chrVI:157869-158173 ( 16) TCCCAACTGAGCTAAATCCGC 1 chrVIII:237749-238099 ( 45) TCCCAACTGAGCTAAATCCGC 1 chrVII:440634-440981 ( 30) TCCCAACTGAGCTAAATCCGC 1 chrXVI:560049-560454 ( 68) TCCCAACTGAGCTAAATCCGC 1 chrVIII:358376-358741 ( 41) TCCCAACTGAGCTAAATCCGC 1 chrXVI:622470-622799 ( 27) TCCCAACTGAGCTAAATCCGC 1 chrXIV:631768-632041 ( 43) ATACCTCTAGACCACACGCCC 1 chrIII:123477-123787 ( 46) ATACCTCTAGACCACACGCCC 1 chrII:326710-327038 ( 21) GAACCACTGGACCATTGGACC 1 chrXV:976354-976549 ( 20) TTCCTACTGAGCTACTGAAGC 1 chrXIII:572752-573124 ( 47) TTCCTACTGAGCTACTGAAGC 1 chrX:422769-423092 ( 57) TTCCTACTGAGCTACTGAAGC 1 chrIV:1175665-1175998 ( 48) TTCCTACTGAGCTACTGAAGC 1 chrX:390942-391293 ( 28) TTCCTACTGAGCTACTGAAGC 1 chrVII:319739-319918 ( 3) TAACCACTATACTAAGATGGC 1 chrXII:818484-818770 ( 32) TAACCATTGCACTAGAGGAGC 1 chrXIII:362931-363224 ( 37) TAACCACTATACTAAGATGGC 1 chrVIII:62602-62923 ( 43) TAACCACTATACTAAGATGGC 1 chrX:541391-541679 ( 23) TGACCATTAAACTATCACGGA 1 chrXIII:463413-463681 ( 57) TGACCATTAAACTATCACGGA 1 chrXI:513270-513542 ( 27) TGACCATTAAACTATCACGGA 1 chrVII:531476-531780 ( 32) TGACCATTAAACTATCACGGA 1 chrXII:426964-427290 ( 55) TGACCATTAAACTATCACGGA 1 chrXV:571788-572118 ( 55) TGACCATTAAACTATCACGGA 1 chrX:204581-204914 ( 38) TGACCATTAAACTATCACGGA 1 chrIX:324226-324549 ( 17) TGACCATTAAACTATCACGGA 1 chrXII:793743-794056 ( 69) TGACCATTAAACTATCACGGA 1 chrX:374300-374741 ( 5) TGACCATTAAACTATCACGGA 1 chrVII:544485-544811 ( 30) TGACCATTAAACTATCACGGA 1 chrIX:336268-336583 ( 25) TGACCATTAAACTATCACGGA 1 chrXVI:56101-56372 ( 68) CTACCATTGAGCCACCGCTTC 1 chrVIII:475609-475924 ( 42) TAGCCGCTACACTATTGGAAC 1 chrIX:197429-197737 ( 59) TAGCCGTTACACTACATCGGA 1 chrIV:1075393-1075705 ( 25) TAGCCGCTACACTATTGGAAC 1 chrIV:1017098-1017454 ( 32) TAGCCGTTACACTACATCGGA 1 chrVII:878623-878968 ( 50) CTACCATTGAGCCACCGCTTC 1 chrX:415868-416202 ( 31) CTACCATTGAGCCACCGCTTC 1 chrVII:287267-287622 ( 41) CTACCATTGAGCCACCGCTTC 1 chrXIII:379242-379573 ( 31) CTACCATTGAGCCACCGCTTC 1 chrXI:302748-303116 ( 36) CTACCATTGAGCCACCGCTTC 1 chrXV:710041-710326 ( 68) CTTCCACTGCGCCACGGCGCT 1 chrX:517748-518041 ( 20) CTTCCACTGCGCCACGGCGCT 1 chrIII:149753-150081 ( 53) CTTCCACTGCGCCACGGCGCT 1 chrV:99974-100298 ( 47) CTTCCACTGCGCCACGGCGCT 1 chrV:117981-118210 ( 41) TACCATGTGCGCCACGAGGCC 1 chrXIII:168701-168988 ( 1) AACCAACTTGGCTACCGAGAG 1 chrX:354132-354415 ( 21) AACCAACTTGGCTACCGAGAG 1 chrXV:288033-288344 ( 54) AACCAACTTGGCTACCGAGAG 1 chrVI:167285-167595 ( 47) AACCAACTTGGCTACCGAGAG 1 chrXIII:837759-838093 ( 52) AACCAACTTGGCTACCGAGAG 1 chrVI:210522-210868 ( 42) AACCAACTTGGCTACCGAGAG 1 chrX:542858-543212 ( 39) AACCAACTTGGCTACCGAGAG 1 chrIII:82421-82588 ( 59) TAGCCGTTACACTATATCGGA 1 chrV:354782-355060 ( 63) TAGCCGTTACACTATATCGGA 1 chrV:487244-487526 ( 47) TAGCCGTTACACTATATCGGA 1 chrIX:370250-370560 ( 62) TAGCCGTTACACTATATCGGA 1 chrVII:328419-328836 ( 6) TAGCCGTTACACTATATCGGA 1 chrXII:797011-797333 ( 56) TAGCCGTTACACTATATCGGA 1 chrXI:140916-141239 ( 42) TAGCCGTTACACTATATCGGA 1 chrX:115843-116175 ( 31) TAGCCGTTACACTATATCGGA 1 chrV:176936-177275 ( 44) TAGCCGTTACACTATATCGGA 1 chrII:645006-645328 ( 50) TAGCCGTTACACTATATCGGA 1 chrVII:541686-542082 ( 16) TAGCCGTTACACTATATCGGA 1 chrXIII:290645-290955 ( 51) TAGCCGTTACACTATATCGGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAMCCACTRVRCYAHVNVVSC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 39840 bayes= 8.08285 E= 6.3e-578 -21 -134 -533 104 87 -217 -38 -39 58 111 -69 -412 -1443 244 -1443 -1443 -39 173 -53 -380 148 -1443 -81 -453 -1443 198 -533 -21 -1443 -1443 -1443 166 43 -29 73 -142 -31 75 120 -453 16 -1443 181 -1443 -1443 244 -1443 -1443 -1443 185 -1443 9 166 -1443 -1443 -1443 3 107 -533 -14 7 36 73 -131 -21 25 62 -48 -3 36 102 -195 -3 25 117 -242 -187 106 134 -221 -99 211 -253 -412 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAMCCACTRVRCYAHVNVVSC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 220 E= 6.3e-578 0.272727 0.072727 0.004545 0.650000 0.577273 0.040909 0.140909 0.240909 0.472727 0.395455 0.113636 0.018182 0.000000 1.000000 0.000000 0.000000 0.240909 0.609091 0.127273 0.022727 0.881818 0.000000 0.104545 0.013636 0.000000 0.722727 0.004545 0.272727 0.000000 0.000000 0.000000 1.000000 0.427273 0.150000 0.304545 0.118182 0.254545 0.309091 0.422727 0.013636 0.354545 0.000000 0.645455 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.663636 0.000000 0.336364 1.000000 0.000000 0.000000 0.000000 0.322727 0.386364 0.004545 0.286364 0.331818 0.236364 0.304545 0.127273 0.272727 0.218182 0.281818 0.227273 0.309091 0.236364 0.372727 0.081818 0.309091 0.218182 0.413636 0.059091 0.086364 0.381818 0.463636 0.068182 0.159091 0.790909 0.031818 0.018182 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAMCCACTRVRCYAHVNVVSC MEME-1 regular expression -------------------------------------------------------------------------------- [TA][AT][AC]C[CA]A[CT]T[AG][GCA][GA]C[CT]A[CAT][AGC][GATC][GAC][GAC][GC]C -------------------------------------------------------------------------------- Time 233.63 secs. ******************************************************************************** ******************************************************************************** MOTIF SGGRRTCGAACCSVKGAYCTY MEME-2 width = 21 sites = 75 llr = 1324 E-value = 3.6e-260 ******************************************************************************** -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTY MEME-2 Description -------------------------------------------------------------------------------- Simplified A :2:64:::aa::14:37:::1 pos.-specific C 4:::2:7:::a8632::5734 probability G 67a43::a::::33471:1:: matrix T ::::2a3::::2::4:25174 bits 2.4 * * * 2.2 * * * 2.0 * * * 1.7 * * **** Relative 1.5 * ****** * Entropy 1.2 ** ******* * * (25.5 bits) 1.0 **** ******** * ** 0.7 **** ******** * *** 0.5 **** **************** 0.2 **** **************** 0.0 --------------------- Multilevel GGGAATCGAACCCAGGACCTC consensus CA GG T GCTATT CT sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTY MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXIV:631768-632041 + 2 2.57e-13 C GGGACTCGAACCCGGGACCTC CCGCACCCTA chrIII:123477-123787 + 5 2.57e-13 AGCC GGGACTCGAACCCGGGACCTC CCGCACCCTA chrXII:214781-215083 + 11 3.33e-11 TGGACGCAAC CGGAATCGAACCGATGACCTC TTCCTTGCAA chrI:166143-166424 - 76 3.33e-11 CAAC CGGAATCGAACCGATGACCTC TTCCTTGCAA chrV:311916-312245 + 3 3.33e-11 AC CGGAATCGAACCGATGACCTC TTCCTTGCAA chrIV:667926-668114 + 47 6.74e-11 TGGTCTCTAG CGGGATCGAACCGCTGATCCC CGCGTTATTA chrXII:1052001-1052229 + 16 6.74e-11 TGGTCTCTAG CGGGATCGAACCGCTGATCCC CGCGTTATTA chrXIV:569795-569997 + 31 6.74e-11 TGGTCTCTAG CGGGATCGAACCGCTGATCCC CGCGTTATTA chrV:551221-551465 + 2 6.74e-11 G CGGGATCGAACCGCTGATCCC CGCGTTATTA chrV:443120-443376 + 14 6.74e-11 TGGTCTCTAG CGGGATCGAACCGCTGATCCC CGCGTTATTA chrVII:185590-185917 + 21 8.03e-11 AGCCCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrVI:226598-226876 + 11 8.03e-11 AGCCCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrIV:1352383-1352658 + 6 8.03e-11 TGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrV:135281-135624 + 33 8.03e-11 AGCCCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrVII:122137-122430 - 78 8.03e-11 AG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrXIII:480504-480852 + 3 8.03e-11 AG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrIII:82421-82588 + 18 2.05e-10 CTCCGATACG GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrVI:101415-101520 - 31 2.05e-10 GGGGCGAGCT GGGAATTGAACCCAGGGCCTC TCGCATGCTT chrXIV:547050-547279 - 52 2.05e-10 GGGGCGAGCT GGGAATTGAACCCAGGGCCTC TCGCATGCTT chrVII:405418-405644 - 30 2.05e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrV:487244-487526 + 6 2.05e-10 ATACG GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrXI:162333-162709 + 26 2.05e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrIV:568719-569120 - 54 2.05e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrXIV:567993-568331 - 75 2.05e-10 GAGCT GGGAATTGAACCCAGGGCCTC TCGCATGCTT chrVII:328419-328836 - 47 2.05e-10 CTCCGATACG GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrX:355195-355633 - 51 2.05e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrX:374300-374741 + 46 2.05e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrXI:140916-141239 + 1 2.05e-10 . GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrII:405707-406094 - 69 2.05e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrVII:541686-542082 - 57 2.05e-10 CTCCGATACG GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrVII:828535-828964 + 34 2.05e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrV:138501-138894 - 60 2.05e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrXV:110892-111122 + 15 3.64e-10 TGAGCGGTAC GAGAATCGAACCCGTGTCCCC ACCTTGGAAG chrXIV:96141-96449 + 6 3.64e-10 GGTAC GAGAATCGAACCCGTGTCCCC ACCTTGGAAG chrX:531689-532013 - 67 1.17e-09 TGCGCAAGCC CGGAATCGAACCGGGGGCCCA ACGATGGCAA chrVI:180806-181187 + 38 1.17e-09 TGCGCAAGCC CGGAATCGAACCGGGGGCCCA ACGATGGCAA chrV:61772-62099 + 15 1.17e-09 TGCGCAAGCC CGGAATCGAACCGGGGGCCCA ACGATGGCAA chrXI:578826-579216 - 59 1.67e-09 CTCCTCATAG GGGGCTCGAACCCCTGACATT TCGGTATCCT chrVIII:146146-146323 + 68 1.87e-09 TGGACGAGTC CGGAATCGAACCGGAGACCTC TCCCATGCTA chrIX:174957-175132 - 79 2.10e-09 T CGGATTTGAACCGATGATCTC CACATTACTA chrXIV:560579-560814 + 57 2.10e-09 TGCTTCCAAT CGGATTTGAACCGATGATCTC CACATTACTA chrIV:434183-434442 + 12 2.10e-09 TGCTTCCAAT CGGATTTGAACCGATGATCTC CACATTACTA chrX:538433-538711 - 74 2.10e-09 CCGTAC GGGACTCGAACCCGCAGTCTT CTCCTTAGGA chrII:266208-266582 - 75 2.10e-09 CCAAT CGGATTTGAACCGATGATCTC CACATTACTA chrIX:325595-325940 - 73 2.10e-09 TTCCAAT CGGATTTGAACCGATGATCTC CACATTACTA chrIV:488615-489021 + 39 2.63e-09 TGATCCAACC GAGGTTCGAACTCGGGATCTT CGCCGTGTAA chrV:250269-250475 - 5 4.05e-09 AGGTCCTACC CGGATTCGAACCGGGGTTGTC CGGA chrIV:802652-802872 + 29 4.05e-09 AGGTCCTACC CGGATTCGAACCGGGGTTGTC CGGATCAAAA chrVIII:134165-134529 - 65 4.05e-09 AGGTCCTACC CGGATTCGAACCGGGGTTGTC CGGATCAAAA chrIV:946282-946524 - 17 1.19e-08 TCTCCCGGGG GCGAGTCGAACGCCCGATCTC AAGATTTCGT chrXIII:168701-168988 - 59 1.19e-08 TCTCCCGGGG GCGAGTCGAACGCCCGATCTC AAGATTTCGT chrX:354132-354415 - 79 1.19e-08 G GCGAGTCGAACGCCCGATCTC AAGATTTCGT chrXII:975893-976104 + 45 1.57e-08 CGACCCCAGT GAGGGTTGAACTCACGATCTT GCGATTAACA chrXVI:810549-810862 - 64 1.57e-08 CGACCCCAGT GAGGGTTGAACTCACGATCTT GCGATTAACA chrXV:663678-664019 + 24 1.57e-08 CGATTTCGCC CAGGATCGAACTGGGGACGTT CTGCGTGTTA chrVI:137339-137702 + 26 1.57e-08 CGACCCCAGT GAGGGTTGAACTCACGATCTT GCGATTAACA chrVII:823346-823652 - 76 1.57e-08 CGCC CAGGATCGAACTGGGGACGTT CTGCGTGTTA chrVII:730970-731331 - 80 1.57e-08 . GAGGGTTGAACTCACGATCTT GCGATTAACA chrXIII:808129-808470 + 7 3.64e-08 CCCACC CGGATTCGAACTGGGGTTGTT CGGATCAGAA chrXII:818484-818770 - 73 4.60e-08 TCCTCCC GGGACTCGAACCCGGATCACA GCCACCGGAA chrXV:976354-976549 - 62 4.60e-08 TGCTCCAGGG GAGGTTCGAACTCTCGACCTT CAGATTATGA chrXIII:572752-573124 + 5 4.60e-08 AGGG GAGGTTCGAACTCTCGACCTT CAGATTATGA chrXVI:560049-560454 + 7 6.69e-08 AATTCT GTGGATCGAACACAGGACCTC CAGATAACTT chrVIII:466902-467128 - 66 8.29e-08 TGCCACCTGC CAGAATTGAACTAGCGACCTT TGCATTACAA chrXVI:744136-744463 - 76 1.09e-07 CTGT CAGAATTGAACTAACGACCTT TGCATTACAA chrX:541391-541679 - 64 1.72e-07 CTCCGCGACG GGGAATTGAACCCCGATCTGG CACGCGACAA chrVII:531476-531780 - 73 1.72e-07 CGCGACG GGGAATTGAACCCCGATCTGG CACGCGACAA chrX:204581-204914 - 79 1.72e-07 G GGGAATTGAACCCCGATCTGG CACGCGACAA chrVII:706993-707203 + 70 2.77e-07 AGCTCGCACT CAGGATCGAACTAAGGACCAA CAGATTTGCA chrXVI:775653-775995 + 1 2.77e-07 . CAGGATCGAACTAAGGACCAA CAGATTTGCA chrIV:619864-620182 + 6 2.94e-07 CCGCC AGGACTTGAACCTGGAATCTT CTGGTTCGTA chrXV:340182-340530 + 3 2.94e-07 CC AGGACTTGAACCTGGAATCTT CTGGTTCGTA chrVII:319739-319918 - 44 6.12e-07 TGCCATCTCC TAGAATCGAACCAGGGTTTCA TCGGCCACAA chrXIII:362931-363224 - 78 6.12e-07 CC TAGAATCGAACCAGGGTTTCA TCGGCCACAA chrVII:110425-110814 + 66 6.12e-07 TGCCATCTCC TAGAATCGAACCAGGGTTTCA TCGGCCACAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTY MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:631768-632041 2.6e-13 1_[+2]_78 chrIII:123477-123787 2.6e-13 4_[+2]_75 chrXII:214781-215083 3.3e-11 10_[+2]_69 chrI:166143-166424 3.3e-11 75_[-2]_4 chrV:311916-312245 3.3e-11 2_[+2]_77 chrIV:667926-668114 6.7e-11 46_[+2]_33 chrXII:1052001-1052229 6.7e-11 15_[+2]_64 chrXIV:569795-569997 6.7e-11 30_[+2]_49 chrV:551221-551465 6.7e-11 1_[+2]_78 chrV:443120-443376 6.7e-11 13_[+2]_66 chrVII:185590-185917 8e-11 20_[+2]_59 chrVI:226598-226876 8e-11 10_[+2]_69 chrIV:1352383-1352658 8e-11 5_[+2]_74 chrV:135281-135624 8e-11 32_[+2]_47 chrVII:122137-122430 8e-11 77_[-2]_2 chrXIII:480504-480852 8e-11 2_[+2]_77 chrIII:82421-82588 2.1e-10 17_[+2]_62 chrVI:101415-101520 2.1e-10 30_[-2]_49 chrXIV:547050-547279 2.1e-10 51_[-2]_28 chrVII:405418-405644 2.1e-10 29_[-2]_50 chrV:487244-487526 2.1e-10 5_[+2]_74 chrXI:162333-162709 2.1e-10 25_[+2]_54 chrIV:568719-569120 2.1e-10 53_[-2]_26 chrXIV:567993-568331 2.1e-10 74_[-2]_5 chrVII:328419-328836 2.1e-10 46_[-2]_33 chrX:355195-355633 2.1e-10 50_[-2]_29 chrX:374300-374741 2.1e-10 45_[+2]_34 chrXI:140916-141239 2.1e-10 [+2]_79 chrII:405707-406094 2.1e-10 68_[-2]_11 chrVII:541686-542082 2.1e-10 56_[-2]_23 chrVII:828535-828964 2.1e-10 33_[+2]_46 chrV:138501-138894 2.1e-10 59_[-2]_20 chrXV:110892-111122 3.6e-10 14_[+2]_65 chrXIV:96141-96449 3.6e-10 5_[+2]_74 chrX:531689-532013 1.2e-09 66_[-2]_13 chrVI:180806-181187 1.2e-09 37_[+2]_42 chrV:61772-62099 1.2e-09 14_[+2]_65 chrXI:578826-579216 1.7e-09 58_[-2]_21 chrVIII:146146-146323 1.9e-09 67_[+2]_12 chrIX:174957-175132 2.1e-09 78_[-2]_1 chrXIV:560579-560814 2.1e-09 56_[+2]_23 chrIV:434183-434442 2.1e-09 11_[+2]_68 chrX:538433-538711 2.1e-09 73_[-2]_6 chrII:266208-266582 2.1e-09 74_[-2]_5 chrIX:325595-325940 2.1e-09 72_[-2]_7 chrIV:488615-489021 2.6e-09 38_[+2]_41 chrV:250269-250475 4e-09 4_[-2]_75 chrIV:802652-802872 4e-09 28_[+2]_51 chrVIII:134165-134529 4e-09 64_[-2]_15 chrIV:946282-946524 1.2e-08 16_[-2]_63 chrXIII:168701-168988 1.2e-08 58_[-2]_21 chrX:354132-354415 1.2e-08 78_[-2]_1 chrXII:975893-976104 1.6e-08 44_[+2]_35 chrXVI:810549-810862 1.6e-08 63_[-2]_16 chrXV:663678-664019 1.6e-08 23_[+2]_56 chrVI:137339-137702 1.6e-08 25_[+2]_54 chrVII:823346-823652 1.6e-08 75_[-2]_4 chrVII:730970-731331 1.6e-08 79_[-2] chrXIII:808129-808470 3.6e-08 6_[+2]_73 chrXII:818484-818770 4.6e-08 72_[-2]_7 chrXV:976354-976549 4.6e-08 61_[-2]_18 chrXIII:572752-573124 4.6e-08 4_[+2]_75 chrXVI:560049-560454 6.7e-08 6_[+2]_73 chrVIII:466902-467128 8.3e-08 65_[-2]_14 chrXVI:744136-744463 1.1e-07 75_[-2]_4 chrX:541391-541679 1.7e-07 63_[-2]_16 chrVII:531476-531780 1.7e-07 72_[-2]_7 chrX:204581-204914 1.7e-07 78_[-2]_1 chrVII:706993-707203 2.8e-07 69_[+2]_10 chrXVI:775653-775995 2.8e-07 [+2]_79 chrIV:619864-620182 2.9e-07 5_[+2]_74 chrXV:340182-340530 2.9e-07 2_[+2]_77 chrVII:319739-319918 6.1e-07 43_[-2]_36 chrXIII:362931-363224 6.1e-07 77_[-2]_2 chrVII:110425-110814 6.1e-07 65_[+2]_14 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTY MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SGGRRTCGAACCSVKGAYCTY width=21 seqs=75 chrXIV:631768-632041 ( 2) GGGACTCGAACCCGGGACCTC 1 chrIII:123477-123787 ( 5) GGGACTCGAACCCGGGACCTC 1 chrXII:214781-215083 ( 11) CGGAATCGAACCGATGACCTC 1 chrI:166143-166424 ( 76) CGGAATCGAACCGATGACCTC 1 chrV:311916-312245 ( 3) CGGAATCGAACCGATGACCTC 1 chrIV:667926-668114 ( 47) CGGGATCGAACCGCTGATCCC 1 chrXII:1052001-1052229 ( 16) CGGGATCGAACCGCTGATCCC 1 chrXIV:569795-569997 ( 31) CGGGATCGAACCGCTGATCCC 1 chrV:551221-551465 ( 2) CGGGATCGAACCGCTGATCCC 1 chrV:443120-443376 ( 14) CGGGATCGAACCGCTGATCCC 1 chrVII:185590-185917 ( 21) GGGGCTCGAACCCCTAACCTT 1 chrVI:226598-226876 ( 11) GGGGCTCGAACCCCTAACCTT 1 chrIV:1352383-1352658 ( 6) GGGGCTCGAACCCCTAACCTT 1 chrV:135281-135624 ( 33) GGGGCTCGAACCCCTAACCTT 1 chrVII:122137-122430 ( 78) GGGGCTCGAACCCCTAACCTT 1 chrXIII:480504-480852 ( 3) GGGGCTCGAACCCCTAACCTT 1 chrIII:82421-82588 ( 18) GGGAGTCGAACCCCGGTCTCC 1 chrVI:101415-101520 ( 31) GGGAATTGAACCCAGGGCCTC 1 chrXIV:547050-547279 ( 52) GGGAATTGAACCCAGGGCCTC 1 chrVII:405418-405644 ( 30) GGGGGTCGAACCCATAATCTT 1 chrV:487244-487526 ( 6) GGGAGTCGAACCCCGGTCTCC 1 chrXI:162333-162709 ( 26) GGGGGTCGAACCCATAATCTT 1 chrIV:568719-569120 ( 54) GGGGGTCGAACCCATAATCTT 1 chrXIV:567993-568331 ( 75) GGGAATTGAACCCAGGGCCTC 1 chrVII:328419-328836 ( 47) GGGAGTCGAACCCCGGTCTCC 1 chrX:355195-355633 ( 51) GGGGGTCGAACCCATAATCTT 1 chrX:374300-374741 ( 46) GGGGGTCGAACCCATAATCTT 1 chrXI:140916-141239 ( 1) GGGAGTCGAACCCCGGTCTCC 1 chrII:405707-406094 ( 69) GGGGGTCGAACCCATAATCTT 1 chrVII:541686-542082 ( 57) GGGAGTCGAACCCCGGTCTCC 1 chrVII:828535-828964 ( 34) GGGGGTCGAACCCATAATCTT 1 chrV:138501-138894 ( 60) GGGGGTCGAACCCATAATCTT 1 chrXV:110892-111122 ( 15) GAGAATCGAACCCGTGTCCCC 1 chrXIV:96141-96449 ( 6) GAGAATCGAACCCGTGTCCCC 1 chrX:531689-532013 ( 67) CGGAATCGAACCGGGGGCCCA 1 chrVI:180806-181187 ( 38) CGGAATCGAACCGGGGGCCCA 1 chrV:61772-62099 ( 15) CGGAATCGAACCGGGGGCCCA 1 chrXI:578826-579216 ( 59) GGGGCTCGAACCCCTGACATT 1 chrVIII:146146-146323 ( 68) CGGAATCGAACCGGAGACCTC 1 chrIX:174957-175132 ( 79) CGGATTTGAACCGATGATCTC 1 chrXIV:560579-560814 ( 57) CGGATTTGAACCGATGATCTC 1 chrIV:434183-434442 ( 12) CGGATTTGAACCGATGATCTC 1 chrX:538433-538711 ( 74) GGGACTCGAACCCGCAGTCTT 1 chrII:266208-266582 ( 75) CGGATTTGAACCGATGATCTC 1 chrIX:325595-325940 ( 73) CGGATTTGAACCGATGATCTC 1 chrIV:488615-489021 ( 39) GAGGTTCGAACTCGGGATCTT 1 chrV:250269-250475 ( 5) CGGATTCGAACCGGGGTTGTC 1 chrIV:802652-802872 ( 29) CGGATTCGAACCGGGGTTGTC 1 chrVIII:134165-134529 ( 65) CGGATTCGAACCGGGGTTGTC 1 chrIV:946282-946524 ( 17) GCGAGTCGAACGCCCGATCTC 1 chrXIII:168701-168988 ( 59) GCGAGTCGAACGCCCGATCTC 1 chrX:354132-354415 ( 79) GCGAGTCGAACGCCCGATCTC 1 chrXII:975893-976104 ( 45) GAGGGTTGAACTCACGATCTT 1 chrXVI:810549-810862 ( 64) GAGGGTTGAACTCACGATCTT 1 chrXV:663678-664019 ( 24) CAGGATCGAACTGGGGACGTT 1 chrVI:137339-137702 ( 26) GAGGGTTGAACTCACGATCTT 1 chrVII:823346-823652 ( 76) CAGGATCGAACTGGGGACGTT 1 chrVII:730970-731331 ( 80) GAGGGTTGAACTCACGATCTT 1 chrXIII:808129-808470 ( 7) CGGATTCGAACTGGGGTTGTT 1 chrXII:818484-818770 ( 73) GGGACTCGAACCCGGATCACA 1 chrXV:976354-976549 ( 62) GAGGTTCGAACTCTCGACCTT 1 chrXIII:572752-573124 ( 5) GAGGTTCGAACTCTCGACCTT 1 chrXVI:560049-560454 ( 7) GTGGATCGAACACAGGACCTC 1 chrVIII:466902-467128 ( 66) CAGAATTGAACTAGCGACCTT 1 chrXVI:744136-744463 ( 76) CAGAATTGAACTAACGACCTT 1 chrX:541391-541679 ( 64) GGGAATTGAACCCCGATCTGG 1 chrVII:531476-531780 ( 73) GGGAATTGAACCCCGATCTGG 1 chrX:204581-204914 ( 79) GGGAATTGAACCCCGATCTGG 1 chrVII:706993-707203 ( 70) CAGGATCGAACTAAGGACCAA 1 chrXVI:775653-775995 ( 1) CAGGATCGAACTAAGGACCAA 1 chrIV:619864-620182 ( 6) AGGACTTGAACCTGGAATCTT 1 chrXV:340182-340530 ( 3) AGGACTTGAACCTGGAATCTT 1 chrVII:319739-319918 ( 44) TAGAATCGAACCAGGGTTTCA 1 chrXIII:362931-363224 ( 78) TAGAATCGAACCAGGGTTTCA 1 chrVII:110425-110814 ( 66) TAGAATCGAACCAGGGTTTCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTY MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 39840 bayes= 10.4839 E= 3.6e-260 -357 97 164 -298 -40 -220 194 -456 -1287 -1287 244 -1287 86 -1287 122 -1287 34 -8 54 -98 -1287 -1287 -1287 166 -1287 202 -1287 -32 -1287 -1287 244 -1287 166 -1287 -1287 -1287 166 -1287 -1287 -1287 -1287 244 -1287 -1287 -456 205 -220 -76 -176 164 74 -357 19 74 74 -357 -456 -20 122 34 -18 -1287 197 -1287 108 -1287 -98 -40 -1287 150 -1287 60 -357 202 -120 -111 -357 46 -220 110 -140 126 -220 34 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTY MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 75 E= 3.6e-260 0.026667 0.360000 0.573333 0.040000 0.240000 0.040000 0.706667 0.013333 0.000000 0.000000 1.000000 0.000000 0.573333 0.000000 0.426667 0.000000 0.400000 0.173333 0.266667 0.160000 0.000000 0.000000 0.000000 1.000000 0.000000 0.746667 0.000000 0.253333 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.013333 0.760000 0.040000 0.186667 0.093333 0.573333 0.306667 0.026667 0.360000 0.306667 0.306667 0.026667 0.013333 0.160000 0.426667 0.400000 0.280000 0.000000 0.720000 0.000000 0.666667 0.000000 0.093333 0.240000 0.000000 0.520000 0.000000 0.480000 0.026667 0.746667 0.080000 0.146667 0.026667 0.253333 0.040000 0.680000 0.120000 0.440000 0.040000 0.400000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRRTCGAACCSVKGAYCTY MEME-2 regular expression -------------------------------------------------------------------------------- [GC][GA]G[AG][AG]T[CT]GAACC[CG][ACG][GT][GA][AT][CT]C[TC][CT] -------------------------------------------------------------------------------- Time 421.69 secs. ******************************************************************************** ******************************************************************************** MOTIF AGGCGYMAGACTNKWAATCWK MEME-3 width = 21 sites = 57 llr = 983 E-value = 1.5e-171 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGGCGYMAGACTNKWAATCWK MEME-3 Description -------------------------------------------------------------------------------- Simplified A 71:::246:9::32499::4: pos.-specific C :2:a:3412:9:3:::::7:2 probability G 37a:a11:8:::24:1::214 matrix T :::::5:2:11a256:1a154 bits 2.4 *** 2.2 *** 2.0 *** * 1.7 *** * ** * Relative 1.5 *** * ** * * Entropy 1.2 **** **** **** (24.9 bits) 1.0 ***** **** **** 0.7 ***** * **** ***** * 0.5 ***** ****** ***** * 0.2 ********************* 0.0 --------------------- Multilevel AGGCGTAAGACTATTAATCTG consensus GC CCT CGA AT sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGCGYMAGACTNKWAATCWK MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrV:288354-288681 - 16 4.32e-10 CGAGTGGTTA AGGCGACAGACTTGAAATCTG TTGGGCTCTG chrXVI:689402-689749 + 61 4.32e-10 CGAGTGGTTA AGGCGACAGACTTGAAATCTG TTGGGCTCTG chrIX:248663-249029 + 75 4.32e-10 CGAGTGGTTA AGGCGACAGACTTGAAATCTG TTGGG chrIX:174957-175132 + 58 5.90e-10 CAAGTTGGTA AGGCGCCACACTAGTAATGTG GAGATCATCG chrXIV:560579-560814 - 78 5.90e-10 TA AGGCGCCACACTAGTAATGTG GAGATCATCG chrIII:295377-295592 + 71 5.90e-10 CAAGTTGGTA AGGCGCCACACTAGTAATGTG GAGATCATC chrIV:434183-434442 - 33 5.90e-10 CAAGTTGGTA AGGCGCCACACTAGTAATGTG GAGATCATCG chrXV:113651-113967 + 64 5.90e-10 CAAGTTGGTA AGGCGCCACACTAGTAATGTG GAGATCATCG chrXV:353955-354269 - 10 5.90e-10 CAAGTTGGTA AGGCGCCACACTAGTAATGTG GAGATCATC chrX:59033-59310 - 10 5.90e-10 CAAGTTGGTA AGGCGCCACACTAGTAATGTG GAGATCATC chrXIV:104654-104967 + 66 5.90e-10 CAAGTTGGTA AGGCGCCACACTAGTAATGTG GAGATCATCG chrII:266208-266582 + 54 5.90e-10 CAAGTTGGTA AGGCGCCACACTAGTAATGTG GAGATCATCG chrIX:325595-325940 + 52 5.90e-10 CAAGTTGGTA AGGCGCCACACTAGTAATGTG GAGATCATCG chrVIII:116010-116352 - 7 5.90e-10 CAAGTTGGTA AGGCGCCACACTAGTAATGTG GAGATC chrVII:185590-185917 - 42 2.38e-09 GCAATCGGTA GCGCGTATGACTCTTAATCAT AAGGTTAGGG chrVI:226598-226876 - 32 2.38e-09 GCAATCGGTA GCGCGTATGACTCTTAATCAT AAGGTTAGGG chrIV:1352383-1352658 - 27 2.38e-09 GCAATCGGTA GCGCGTATGACTCTTAATCAT AAGGTTAGGG chrV:135281-135624 - 54 2.38e-09 GCAATCGGTA GCGCGTATGACTCTTAATCAT AAGGTTAGGG chrV:435678-435948 - 20 2.38e-09 GCAATCGGTA GCGCGTATGACTCTTAATCAT AAGGTTAGGG chrVII:122137-122430 + 57 2.38e-09 GCAATCGGTA GCGCGTATGACTCTTAATCAT AAGGTTAGGG chrXIII:480504-480852 - 24 2.38e-09 GCAATCGGTA GCGCGTATGACTCTTAATCAT AAGGTTAGGG chrVII:876231-876554 + 73 2.38e-09 GCAATCGGTA GCGCGTATGACTCTTAATCAT AAGGTTA chrIV:1201591-1201918 + 67 2.38e-09 GCAATCGGTA GCGCGTATGACTCTTAATCAT AAGGTTAGGG chrIII:151212-151512 - 3 2.38e-09 GCAATCGGTA GCGCGTATGACTCTTAATCAT AA chrIX:300141-300466 - 6 2.38e-09 GCAATCGGTA GCGCGTATGACTCTTAATCAT AAGGT chrX:414805-415141 + 64 2.38e-09 GCAATCGGTA GCGCGTATGACTCTTAATCAT AAGGTTAGGG chrXII:975893-976104 - 66 4.31e-09 AAGTTGGTTA AGGCGTGCGACTGTTAATCGC AAGATCGTGA chrXVI:810549-810862 + 43 4.31e-09 AAGTTGGTTA AGGCGTGCGACTGTTAATCGC AAGATCGTGA chrXIV:632472-632743 + 64 4.31e-09 AAGTTGGTTA AGGCGTGCGACTGTTAATCGC AAGATCGTGA chrXIV:102569-102883 + 62 4.31e-09 AAGTTGGTTA AGGCGTGCGACTGTTAATCGC AAGATCGTGA chrVI:137339-137702 - 47 4.31e-09 AAGTTGGTTA AGGCGTGCGACTGTTAATCGC AAGATCGTGA chrVII:730970-731331 + 59 4.31e-09 AAGTTGGTTA AGGCGTGCGACTGTTAATCGC AAGATCGTGA chrIII:127551-127871 + 77 4.31e-09 AAGTTGGTTA AGGCGTGCGACTGTTAATCGC AAG chrVII:405418-405644 + 9 1.35e-08 TAATGGCA ACGCGTCTGACTTCTAATCAG AAGATTATGG chrX:374300-374741 - 67 1.35e-08 CGTAATGGCA ACGCGTCTGACTTCTAATCAG AAGATTATGG chrII:226941-227253 + 49 1.77e-08 CGAGTGGTTA AGGCGAAAGATTAGAAATCTT TTGGGCTTTG chrX:523927-524259 - 9 1.77e-08 CGAGTGGTTA AGGCGAAAGATTAGAAATCTT TTGGGCTT chrV:86424-86781 + 73 1.77e-08 CGAGTGGTTA AGGCGAAAGATTAGAAATCTT TTGGGCT chrXII:167869-168191 - 4 1.77e-08 CGAGTGGTTA AGGCGAAAGATTAGAAATCTT TTG chrIV:437604-437947 + 68 1.77e-08 CGAGTGGTTA AGGCGAAAGATTAGAAATCTT TTGGGCTTTG chrXIII:259079-259404 - 7 1.77e-08 CGAGTGGTTA AGGCGAAAGATTAGAAATCTT TTGGGC chrXIII:168701-168988 + 24 2.50e-08 AGTTGGTTTA AGGCGCAAGACTGTAATTTAT CACTACGAAA chrXV:288033-288344 + 77 2.50e-08 AGTTGGTTTA AGGCGCAAGACTGTAATTTAT CAC chrVI:167285-167595 + 70 2.50e-08 AGTTGGTTTA AGGCGCAAGACTGTAATTTAT CACTACGAAA chrX:542858-543212 - 16 2.50e-08 AGTTGGTTTA AGGCGCAAGACTGTAATTTAT CACTACGAAA chrXIV:726089-726299 - 31 2.72e-08 GAGTGGTCTA AGGCGGCAGACTTAAGATCTG TTGGACGGTT chrII:9446-9715 + 75 2.72e-08 GAGTGGTCTA AGGCGGCAGACTTAAGATCTG TTGGA chrIV:519630-519891 + 55 2.72e-08 GAGTGGTCTA AGGCGGCAGACTTAAGATCTG TTGGACGGTT chrXII:962903-963211 - 6 2.72e-08 GAGTGGTCTA AGGCGGCAGACTTAAGATCTG TTGGA chrXV:976354-976549 + 41 2.95e-08 TCAGTAGGAA GAGCGTCAGTCTCATAATCTG AAGGTCGAGA chrXIII:572752-573124 - 26 2.95e-08 TCAGTAGGAA GAGCGTCAGTCTCATAATCTG AAGGTCGAGA chrX:422769-423092 + 78 2.95e-08 TCAGTAGGAA GAGCGTCAGTCTCATAATCTG AA chrIV:1175665-1175998 + 69 2.95e-08 TCAGTAGGAA GAGCGTCAGTCTCATAATCTG AAGGTCGAGA chrX:390942-391293 - 7 2.95e-08 TCAGTAGGAA GAGCGTCAGTCTCATAATCTG AAGGTC chrX:354132-354415 + 44 3.19e-08 AGTTGGTTTA AGGCGCAAGACTGTAATTTAC CACTACGAAA chrXIII:837759-838093 + 75 3.19e-08 AGTTGGTTTA AGGCGCAAGACTGTAATTTAC CACTA chrVI:210522-210868 - 19 3.19e-08 AGTTGGTTTA AGGCGCAAGACTGTAATTTAC CACTACGAAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGCGYMAGACTNKWAATCWK MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrV:288354-288681 4.3e-10 15_[-3]_64 chrXVI:689402-689749 4.3e-10 60_[+3]_19 chrIX:248663-249029 4.3e-10 74_[+3]_5 chrIX:174957-175132 5.9e-10 57_[+3]_22 chrXIV:560579-560814 5.9e-10 77_[-3]_2 chrIII:295377-295592 5.9e-10 70_[+3]_9 chrIV:434183-434442 5.9e-10 32_[-3]_47 chrXV:113651-113967 5.9e-10 63_[+3]_16 chrXV:353955-354269 5.9e-10 9_[-3]_70 chrX:59033-59310 5.9e-10 9_[-3]_70 chrXIV:104654-104967 5.9e-10 65_[+3]_14 chrII:266208-266582 5.9e-10 53_[+3]_26 chrIX:325595-325940 5.9e-10 51_[+3]_28 chrVIII:116010-116352 5.9e-10 6_[-3]_73 chrVII:185590-185917 2.4e-09 41_[-3]_38 chrVI:226598-226876 2.4e-09 31_[-3]_48 chrIV:1352383-1352658 2.4e-09 26_[-3]_53 chrV:135281-135624 2.4e-09 53_[-3]_26 chrV:435678-435948 2.4e-09 19_[-3]_60 chrVII:122137-122430 2.4e-09 56_[+3]_23 chrXIII:480504-480852 2.4e-09 23_[-3]_56 chrVII:876231-876554 2.4e-09 72_[+3]_7 chrIV:1201591-1201918 2.4e-09 66_[+3]_13 chrIII:151212-151512 2.4e-09 2_[-3]_77 chrIX:300141-300466 2.4e-09 5_[-3]_74 chrX:414805-415141 2.4e-09 63_[+3]_16 chrXII:975893-976104 4.3e-09 65_[-3]_14 chrXVI:810549-810862 4.3e-09 42_[+3]_37 chrXIV:632472-632743 4.3e-09 63_[+3]_16 chrXIV:102569-102883 4.3e-09 61_[+3]_18 chrVI:137339-137702 4.3e-09 46_[-3]_33 chrVII:730970-731331 4.3e-09 58_[+3]_21 chrIII:127551-127871 4.3e-09 76_[+3]_3 chrVII:405418-405644 1.3e-08 8_[+3]_71 chrX:374300-374741 1.3e-08 66_[-3]_13 chrII:226941-227253 1.8e-08 48_[+3]_31 chrX:523927-524259 1.8e-08 8_[-3]_71 chrV:86424-86781 1.8e-08 72_[+3]_7 chrXII:167869-168191 1.8e-08 3_[-3]_76 chrIV:437604-437947 1.8e-08 67_[+3]_12 chrXIII:259079-259404 1.8e-08 6_[-3]_73 chrXIII:168701-168988 2.5e-08 23_[+3]_56 chrXV:288033-288344 2.5e-08 76_[+3]_3 chrVI:167285-167595 2.5e-08 69_[+3]_10 chrX:542858-543212 2.5e-08 15_[-3]_64 chrXIV:726089-726299 2.7e-08 30_[-3]_49 chrII:9446-9715 2.7e-08 74_[+3]_5 chrIV:519630-519891 2.7e-08 54_[+3]_25 chrXII:962903-963211 2.7e-08 5_[-3]_74 chrXV:976354-976549 2.9e-08 40_[+3]_39 chrXIII:572752-573124 2.9e-08 25_[-3]_54 chrX:422769-423092 2.9e-08 77_[+3]_2 chrIV:1175665-1175998 2.9e-08 68_[+3]_11 chrX:390942-391293 2.9e-08 6_[-3]_73 chrX:354132-354415 3.2e-08 43_[+3]_36 chrXIII:837759-838093 3.2e-08 74_[+3]_5 chrVI:210522-210868 3.2e-08 18_[-3]_61 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGCGYMAGACTNKWAATCWK MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGGCGYMAGACTNKWAATCWK width=21 seqs=57 chrV:288354-288681 ( 16) AGGCGACAGACTTGAAATCTG 1 chrXVI:689402-689749 ( 61) AGGCGACAGACTTGAAATCTG 1 chrIX:248663-249029 ( 75) AGGCGACAGACTTGAAATCTG 1 chrIX:174957-175132 ( 58) AGGCGCCACACTAGTAATGTG 1 chrXIV:560579-560814 ( 78) AGGCGCCACACTAGTAATGTG 1 chrIII:295377-295592 ( 71) AGGCGCCACACTAGTAATGTG 1 chrIV:434183-434442 ( 33) AGGCGCCACACTAGTAATGTG 1 chrXV:113651-113967 ( 64) AGGCGCCACACTAGTAATGTG 1 chrXV:353955-354269 ( 10) AGGCGCCACACTAGTAATGTG 1 chrX:59033-59310 ( 10) AGGCGCCACACTAGTAATGTG 1 chrXIV:104654-104967 ( 66) AGGCGCCACACTAGTAATGTG 1 chrII:266208-266582 ( 54) AGGCGCCACACTAGTAATGTG 1 chrIX:325595-325940 ( 52) AGGCGCCACACTAGTAATGTG 1 chrVIII:116010-116352 ( 7) AGGCGCCACACTAGTAATGTG 1 chrVII:185590-185917 ( 42) GCGCGTATGACTCTTAATCAT 1 chrVI:226598-226876 ( 32) GCGCGTATGACTCTTAATCAT 1 chrIV:1352383-1352658 ( 27) GCGCGTATGACTCTTAATCAT 1 chrV:135281-135624 ( 54) GCGCGTATGACTCTTAATCAT 1 chrV:435678-435948 ( 20) GCGCGTATGACTCTTAATCAT 1 chrVII:122137-122430 ( 57) GCGCGTATGACTCTTAATCAT 1 chrXIII:480504-480852 ( 24) GCGCGTATGACTCTTAATCAT 1 chrVII:876231-876554 ( 73) GCGCGTATGACTCTTAATCAT 1 chrIV:1201591-1201918 ( 67) GCGCGTATGACTCTTAATCAT 1 chrIII:151212-151512 ( 3) GCGCGTATGACTCTTAATCAT 1 chrIX:300141-300466 ( 6) GCGCGTATGACTCTTAATCAT 1 chrX:414805-415141 ( 64) GCGCGTATGACTCTTAATCAT 1 chrXII:975893-976104 ( 66) AGGCGTGCGACTGTTAATCGC 1 chrXVI:810549-810862 ( 43) AGGCGTGCGACTGTTAATCGC 1 chrXIV:632472-632743 ( 64) AGGCGTGCGACTGTTAATCGC 1 chrXIV:102569-102883 ( 62) AGGCGTGCGACTGTTAATCGC 1 chrVI:137339-137702 ( 47) AGGCGTGCGACTGTTAATCGC 1 chrVII:730970-731331 ( 59) AGGCGTGCGACTGTTAATCGC 1 chrIII:127551-127871 ( 77) AGGCGTGCGACTGTTAATCGC 1 chrVII:405418-405644 ( 9) ACGCGTCTGACTTCTAATCAG 1 chrX:374300-374741 ( 67) ACGCGTCTGACTTCTAATCAG 1 chrII:226941-227253 ( 49) AGGCGAAAGATTAGAAATCTT 1 chrX:523927-524259 ( 9) AGGCGAAAGATTAGAAATCTT 1 chrV:86424-86781 ( 73) AGGCGAAAGATTAGAAATCTT 1 chrXII:167869-168191 ( 4) AGGCGAAAGATTAGAAATCTT 1 chrIV:437604-437947 ( 68) AGGCGAAAGATTAGAAATCTT 1 chrXIII:259079-259404 ( 7) AGGCGAAAGATTAGAAATCTT 1 chrXIII:168701-168988 ( 24) AGGCGCAAGACTGTAATTTAT 1 chrXV:288033-288344 ( 77) AGGCGCAAGACTGTAATTTAT 1 chrVI:167285-167595 ( 70) AGGCGCAAGACTGTAATTTAT 1 chrX:542858-543212 ( 16) AGGCGCAAGACTGTAATTTAT 1 chrXIV:726089-726299 ( 31) AGGCGGCAGACTTAAGATCTG 1 chrII:9446-9715 ( 75) AGGCGGCAGACTTAAGATCTG 1 chrIV:519630-519891 ( 55) AGGCGGCAGACTTAAGATCTG 1 chrXII:962903-963211 ( 6) AGGCGGCAGACTTAAGATCTG 1 chrXV:976354-976549 ( 41) GAGCGTCAGTCTCATAATCTG 1 chrXIII:572752-573124 ( 26) GAGCGTCAGTCTCATAATCTG 1 chrX:422769-423092 ( 78) GAGCGTCAGTCTCATAATCTG 1 chrIV:1175665-1175998 ( 69) GAGCGTCAGTCTCATAATCTG 1 chrX:390942-391293 ( 7) GAGCGTCAGTCTCATAATCTG 1 chrX:354132-354415 ( 44) AGGCGCAAGACTGTAATTTAC 1 chrXIII:837759-838093 ( 75) AGGCGCAAGACTGTAATTTAC 1 chrVI:210522-210868 ( 19) AGGCGCAAGACTGTAATTTAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGCGYMAGACTNKWAATCWK MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 39840 bayes= 10.0711 E= 1.5e-171 115 -1248 70 -1248 -185 42 186 -1248 -1248 -1248 244 -1248 -1248 244 -1248 -1248 -1248 -1248 244 -1248 -100 78 -139 53 47 126 -58 -1248 100 -58 -1248 -36 -1248 7 214 -1248 153 -1248 -1248 -185 -1248 228 -1248 -159 -1248 -1248 -1248 166 -8 70 42 -100 -100 -239 93 53 15 -1248 -1248 104 156 -1248 -139 -1248 147 -1248 -1248 -136 -1248 -1248 -1248 166 -1248 190 7 -136 22 -1248 -58 69 -1248 -7 126 29 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGCGYMAGACTNKWAATCWK MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 57 E= 1.5e-171 0.701754 0.000000 0.298246 0.000000 0.087719 0.245614 0.666667 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.157895 0.315789 0.070175 0.456140 0.438596 0.438596 0.122807 0.000000 0.631579 0.122807 0.000000 0.245614 0.000000 0.192982 0.807018 0.000000 0.912281 0.000000 0.000000 0.087719 0.000000 0.894737 0.000000 0.105263 0.000000 0.000000 0.000000 1.000000 0.298246 0.298246 0.245614 0.157895 0.157895 0.035088 0.350877 0.456140 0.350877 0.000000 0.000000 0.649123 0.929825 0.000000 0.070175 0.000000 0.877193 0.000000 0.000000 0.122807 0.000000 0.000000 0.000000 1.000000 0.000000 0.684211 0.192982 0.122807 0.368421 0.000000 0.122807 0.508772 0.000000 0.175439 0.438596 0.385965 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGCGYMAGACTNKWAATCWK MEME-3 regular expression -------------------------------------------------------------------------------- [AG][GC]GCG[TC][AC][AT]GACT[ACG][TG][TA]AATC[TA][GT] -------------------------------------------------------------------------------- Time 734.99 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:459489-460073 2.22e-03 14_[-1(7.73e-07)]_65 chrIX:316127-316591 2.72e-01 100 chrXV:167986-168425 4.53e-01 100 chrII:477076-477453 4.69e-01 100 chrXII:796413-796859 5.78e-01 100 chrXV:216253-216671 7.65e-01 100 chrXII:922116-922535 5.04e-01 100 chrIII:163457-163862 6.00e-01 100 chrXIII:551382-551786 9.65e-01 100 chrII:332317-332727 9.75e-01 100 chrV:305802-306199 4.22e-01 100 chrV:140473-140872 7.28e-01 100 chrXII:713167-713550 9.01e-01 100 chrVII:149118-149498 9.92e-01 100 chrXVI:699979-700369 6.11e-01 100 chrIV:117193-117573 8.73e-01 100 chrIV:1359393-1359784 7.87e-01 100 chrVIII:74965-75360 7.58e-01 100 chrXII:673823-674218 7.13e-02 100 chrVIII:382931-383309 2.59e-01 100 chrVII:534801-535212 2.20e-01 100 chrXV:1028705-1029074 9.42e-01 100 chrII:592912-593273 3.07e-01 100 chrVIII:125950-126297 6.70e-01 100 chrXI:618826-619190 4.34e-01 100 chrXII:781481-781828 2.12e-01 100 chrIV:130599-130944 2.53e-01 100 chrXVI:731941-732298 6.73e-01 100 chrXV:866586-866932 3.96e-01 100 chrVII:310526-310880 6.58e-01 100 chrVII:788343-788704 7.37e-01 100 chrXIV:63138-63498 6.22e-01 100 chrV:53534-53920 6.60e-01 100 chrX:73417-73759 6.28e-01 100 chrXV:505136-505494 8.39e-01 100 chrX:703284-703613 5.78e-01 100 chrXII:460502-460841 7.83e-01 100 chrX:90088-90424 8.40e-01 100 chrIV:1300964-1301324 9.98e-01 100 chrVII:648967-649322 9.44e-01 100 chrIV:1401261-1401592 8.73e-01 100 chrX:75361-75719 9.70e-01 100 chrXIII:225373-225709 5.18e-01 100 chrIV:411281-411617 1.46e-01 100 chrV:396230-396564 9.27e-01 100 chrXII:241652-241982 1.91e-01 100 chrII:415525-415862 1.77e-01 100 chrVII:254168-254529 6.56e-01 100 chrVI:95488-95833 1.99e-01 100 chrXIII:145902-146267 2.35e-01 100 chrXV:79790-80099 8.19e-01 100 chrIX:99675-100000 3.22e-01 100 chrXVI:520182-520520 4.44e-01 100 chrII:89645-89958 6.45e-01 100 chrVIII:505851-506179 8.82e-01 100 chrIV:221978-222305 5.65e-01 100 chrV:423127-423439 4.33e-01 100 chrXI:158248-158591 9.05e-01 100 chrII:45017-45331 2.15e-01 100 chrIV:341299-341605 4.81e-01 100 chrIV:308031-308364 6.76e-01 100 chrXIV:495217-495533 9.86e-01 100 chrXIII:732054-732370 6.41e-01 100 chrXV:779727-780059 7.95e-01 100 chrVII:555342-555674 3.10e-01 100 chrX:617753-618082 1.25e-05 51_[-1(5.61e-08)]_28 chrVII:661576-661906 6.68e-05 57_[-1(1.43e-07)]_22 chrVI:65002-65313 9.52e-01 100 chrII:60882-61230 8.36e-01 100 chrVII:438590-438894 5.20e-01 100 chrVII:726441-726745 9.69e-01 100 chrXV:92964-93285 1.61e-02 16_[+2(1.08e-05)]_63 chrXI:302748-303116 1.63e-03 35_[-1(4.47e-06)]_44 chrXIV:241405-241719 1.90e-01 100 chrXIII:379242-379573 1.63e-03 30_[+1(4.47e-06)]_49 chrXVI:406223-406528 5.10e-01 100 chrIII:227780-228131 4.32e-08 36_[-1(5.95e-09)]_[+3(3.12e-05)]_22 chrXIII:259079-259404 9.96e-10 6_[-3(1.77e-08)]_[+1(7.12e-09)]_52 chrIX:254249-254534 1.86e-01 100 chrIX:248663-249029 2.84e-11 53_[-1(5.95e-09)]_[+3(4.32e-10)]_5 chrXV:94485-94817 9.68e-01 100 chrX:542858-543212 7.18e-07 15_[-3(2.50e-08)]_2_[+1(6.46e-06)]_\ 41 chrXVI:76381-76692 3.78e-01 100 chrX:390942-391293 5.27e-08 6_[-3(2.95e-08)]_[+1(2.35e-06)]_52 chrXII:1028247-1028546 7.81e-01 100 chrVII:287267-287622 3.29e-04 40_[+1(4.47e-06)]_39 chrVIII:103923-104231 9.26e-01 100 chrIV:1175665-1175998 1.75e-07 47_[-1(2.35e-06)]_[+3(2.95e-08)]_11 chrXII:932112-932461 9.28e-01 100 chrX:424369-424691 1.02e-04 14_[+1(1.62e-07)]_65 chrXVI:622470-622799 2.66e-04 26_[+1(8.54e-07)]_53 chrVIII:116010-116352 1.08e-10 6_[-3(5.90e-10)]_[+1(4.21e-08)]_52 chrX:651294-651580 8.19e-01 100 chrXII:366091-366417 5.69e-02 100 chrX:415868-416202 8.55e-04 30_[+1(4.47e-06)]_49 chrV:138501-138894 2.15e-16 38_[+3(1.35e-08)]_[-2(2.05e-10)]_20 chrVIII:132949-133289 8.43e-05 17_[+1(7.12e-09)]_62 chrXVI:744136-744463 3.43e-08 34_[-1(1.43e-07)]_20_[-2(1.09e-07)]_\ 4 chrVIII:62602-62923 6.99e-03 42_[-1(2.77e-06)]_37 chrXIII:808129-808470 6.70e-09 6_[+2(3.64e-08)]_20_[+1(2.68e-08)]_\ 32 chrXV:228161-228484 2.47e-03 58_[-1(4.11e-07)]_21 chrVI:210522-210868 8.95e-07 18_[-3(3.19e-08)]_2_[+1(6.46e-06)]_\ 38 chrVIII:388814-389161 2.99e-05 37_[+1(1.20e-08)]_42 chrIX:257369-257677 9.81e-01 100 chrII:604154-604443 6.35e-01 100 chrXIII:296802-297115 8.40e-01 100 chrXVI:769106-769473 2.14e-04 42_[+1(5.11e-07)]_37 chrVII:878623-878968 1.63e-03 49_[+1(4.47e-06)]_30 chrXVI:860215-860535 5.72e-05 53_[-1(7.40e-08)]_26 chrX:422769-423092 2.38e-07 56_[-1(2.35e-06)]_[+3(2.95e-08)]_2 chrXIII:572752-573124 7.09e-12 4_[+2(4.60e-08)]_[-3(2.95e-08)]_\ [+1(2.35e-06)]_33 chrXVI:689402-689749 1.62e-11 39_[-1(5.95e-09)]_[+3(4.32e-10)]_19 chrXIV:96141-96449 4.58e-11 5_[+2(3.64e-10)]_20_[+1(1.67e-08)]_\ 3_[-1(1.18e-05)]_9 chrIV:437604-437947 9.96e-10 46_[-1(7.12e-09)]_[+3(1.77e-08)]_12 chrXII:167869-168191 9.96e-10 3_[-3(1.77e-08)]_[+1(7.12e-09)]_55 chrIV:1150736-1151109 8.56e-05 48_[+1(7.12e-09)]_31 chrXVI:435784-436130 5.28e-07 36_[+1(2.68e-08)]_43 chrX:414805-415141 2.56e-10 42_[-1(3.63e-08)]_[+3(2.38e-09)]_16 chrXII:1018980-1019341 7.94e-01 100 chrXV:226521-226849 2.00e-04 25_[+1(7.40e-08)]_54 chrXIII:290645-290955 2.49e-02 50_[-1(7.44e-06)]_29 chrVII:110425-110814 4.49e-03 65_[+2(6.12e-07)]_14 chrIII:127551-127871 1.14e-08 54_[-1(4.11e-07)]_1_[+3(4.31e-09)]_\ 3 chrXII:605203-605580 1.09e-05 70_[+1(3.39e-09)]_9 chrVII:828535-828964 2.15e-16 33_[+2(2.05e-10)]_[-3(1.35e-08)]_25 chrXV:340182-340530 1.33e-07 2_[+2(2.94e-07)]_21_[+1(2.94e-07)]_\ 35 chrV:86424-86781 7.93e-10 51_[-1(7.12e-09)]_[+3(1.77e-08)]_7 chrXIII:131723-132063 1.96e-09 12_[-3(1.35e-08)]_67 chrV:311916-312245 1.23e-12 2_[+2(3.33e-11)]_21_[+1(2.78e-09)]_\ 35 chrXIII:362931-363224 3.07e-06 36_[-1(2.77e-06)]_20_[-2(6.12e-07)]_\ 2 chrVII:730970-731331 8.11e-14 36_[-1(4.11e-07)]_1_[+3(4.31e-09)]_\ [-2(1.57e-08)] chrXIII:837759-838093 7.29e-07 51_[-1(6.46e-06)]_2_[+3(3.19e-08)]_\ 5 chrXVI:775653-775995 6.77e-11 [+2(2.77e-07)]_20_[+1(2.68e-08)]_38 chrIV:1017098-1017454 7.44e-03 31_[+1(4.47e-06)]_48 chrVII:845479-845833 5.72e-05 42_[-1(7.40e-08)]_37 chrIX:300141-300466 3.59e-10 5_[-3(2.38e-09)]_[+1(3.63e-08)]_53 chrVI:221747-222058 6.22e-01 100 chrVIII:358376-358741 2.78e-04 40_[+1(8.54e-07)]_39 chrVII:412213-412528 4.53e-05 26_[+1(6.45e-08)]_53 chrVII:736162-736532 2.76e-10 62_[+3(1.35e-08)]_17 chrX:523927-524259 9.96e-10 8_[-3(1.77e-08)]_[+1(7.12e-09)]_50 chrX:233769-234079 1.96e-03 64_[-1(2.94e-07)]_15 chrXII:897741-898013 8.19e-01 100 chrVI:162072-162379 5.72e-05 52_[-1(7.40e-08)]_27 chrII:197328-197624 7.60e-05 67_[-1(7.12e-09)]_12 chrIX:325595-325940 2.07e-16 30_[-1(4.21e-08)]_[+3(5.90e-10)]_\ [-2(2.10e-09)]_7 chrXII:448565-448873 7.59e-06 31_[+1(2.68e-08)]_48 chrXIII:754451-754743 6.83e-01 100 chrIV:1075393-1075705 1.22e-02 24_[+1(4.47e-06)]_55 chrXVI:819358-819678 4.22e-05 60_[-1(7.12e-09)]_19 chrVII:541686-542082 1.05e-08 15_[-1(7.44e-06)]_20_[-2(2.05e-10)]_\ 23 chrX:157471-157787 6.23e-01 100 chrXV:274506-274863 5.43e-05 38_[-1(7.12e-09)]_41 chrV:431075-431512 2.04e-01 100 chrXVI:560049-560454 2.90e-08 6_[+2(6.69e-08)]_40_[+1(8.54e-07)]_\ 12 chrXV:438476-438854 2.14e-04 27_[-1(5.11e-07)]_52 chrX:378195-378521 8.62e-05 51_[-1(6.45e-08)]_28 chrII:266208-266582 2.07e-16 32_[-1(4.21e-08)]_[+3(5.90e-10)]_\ [-2(2.10e-09)]_5 chrVI:167285-167595 7.18e-07 46_[-1(6.46e-06)]_2_[+3(2.50e-08)]_\ 10 chrXI:108776-109051 5.48e-01 100 chrII:405707-406094 2.15e-16 47_[+3(1.35e-08)]_[-2(2.05e-10)]_11 chrII:645006-645328 6.77e-03 49_[-1(7.44e-06)]_30 chrIX:197429-197737 1.35e-02 58_[-1(4.47e-06)]_21 chrII:326710-327038 5.95e-04 20_[+1(1.04e-06)]_59 chrVII:440634-440981 6.40e-04 29_[+1(8.54e-07)]_50 chrXII:48741-49076 8.77e-01 100 chrVIII:237749-238099 5.27e-04 44_[+1(8.54e-07)]_35 chrVI:157869-158173 5.54e-03 15_[+1(8.54e-07)]_64 chrVII:774180-774536 1.11e-05 40_[-1(1.22e-09)]_39 chrV:176936-177275 2.49e-02 43_[-1(7.44e-06)]_36 chrX:115843-116175 2.49e-02 30_[+1(7.44e-06)]_49 chrIII:142616-142938 2.00e-04 23_[+1(7.40e-08)]_56 chrV:99974-100298 1.92e-03 46_[-1(5.59e-06)]_33 chrIX:336268-336583 4.34e-03 24_[+1(3.54e-06)]_55 chrVII:544485-544811 8.67e-03 29_[+1(3.54e-06)]_50 chrV:288354-288681 1.62e-11 15_[-3(4.32e-10)]_[+1(5.95e-09)]_43 chrXI:308077-308367 7.93e-05 24_[+1(6.45e-08)]_55 chrI:138992-139295 2.99e-05 58_[-1(1.20e-08)]_21 chrV:469288-469612 1.24e-04 56_[-1(6.45e-08)]_23 chrXI:140916-141239 9.35e-09 [+2(2.05e-10)]_20_[+1(7.44e-06)]_38 chrVIII:134165-134529 9.98e-10 23_[-1(2.68e-08)]_20_[-2(4.05e-09)]_\ 15 chrVII:205354-205665 1.10e-04 61_[-1(2.62e-07)]_18 chrII:36234-36542 5.69e-03 59_[-1(8.54e-07)]_20 chrIII:151212-151512 3.59e-10 2_[-3(2.38e-09)]_[+1(3.63e-08)]_56 chrXV:678871-679164 5.82e-01 100 chrVII:422916-423288 1.90e-04 39_[-1(2.62e-07)]_40 chrXI:490798-491117 1.46e-03 60_[-1(2.94e-07)]_19 chrIX:68231-68507 9.74e-01 100 chrIV:520823-521107 4.11e-05 56_[-1(2.68e-08)]_23 chrXIV:104654-104967 2.52e-10 44_[-1(4.21e-08)]_[+3(5.90e-10)]_14 chrXII:731982-732257 3.16e-06 20_[-1(5.61e-08)]_59 chrIV:1201591-1201918 3.59e-10 45_[-1(3.63e-08)]_[+3(2.38e-09)]_13 chrXII:374184-374518 2.54e-04 53_[-1(2.94e-07)]_26 chrIII:168220-168547 1.92e-04 18_[+1(2.68e-08)]_61 chrVII:876231-876554 3.59e-10 51_[-1(3.63e-08)]_[+3(2.38e-09)]_7 chrX:374300-374741 3.01e-14 4_[+1(3.54e-06)]_20_[+2(2.05e-10)]_\ [-3(1.35e-08)]_13 chrIV:1305459-1305769 2.80e-05 65_[-1(7.12e-09)]_14 chrX:59033-59310 1.37e-10 9_[-3(5.90e-10)]_[+1(4.21e-08)]_49 chrX:197220-197530 1.31e-06 39_[+1(1.22e-09)]_40 chrXII:793743-794056 7.98e-03 68_[-1(3.54e-06)]_11 chrIII:149753-150081 1.92e-03 52_[-1(5.59e-06)]_27 chrV:61772-62099 1.23e-10 14_[+2(1.17e-09)]_19_[+1(7.40e-08)]_\ 25 chrV:441831-442549 9.18e-02 100 chrXV:353955-354269 1.99e-10 9_[-3(5.90e-10)]_[+1(4.21e-08)]_49 chrIV:579079-579353 9.76e-01 100 chrIX:324226-324549 1.43e-02 16_[+1(3.54e-06)]_63 chrX:355195-355633 2.15e-16 29_[+3(1.35e-08)]_[-2(2.05e-10)]_29 chrII:347432-347742 8.12e-05 65_[-1(1.62e-07)]_14 chrVII:823346-823652 8.31e-09 32_[-1(6.45e-08)]_22_[-2(1.57e-08)]_\ 4 chrXII:498534-498849 8.61e-01 100 chrXII:628215-628591 3.48e-05 29_[-1(2.62e-07)]_1_[+3(6.36e-05)]_\ 28 chrXII:962903-963211 1.74e-09 5_[-3(2.72e-08)]_1_[+1(1.62e-07)]_\ 52 chrVII:738972-739264 2.72e-05 53_[-1(7.12e-09)]_26 chrVII:115338-115690 2.14e-04 23_[-1(5.11e-07)]_56 chrVI:137339-137702 8.11e-14 25_[+2(1.57e-08)]_[-3(4.31e-09)]_1_\ [+1(4.11e-07)]_11 chrXII:784208-784525 3.49e-06 37_[-1(7.12e-09)]_42 chrX:538433-538711 3.64e-11 32_[-1(2.06e-07)]_20_[-2(2.10e-09)]_\ 6 chrXII:592435-592741 3.16e-06 60_[+1(5.61e-08)]_19 chrIV:488615-489021 2.09e-05 38_[+2(2.63e-09)]_41 chrXVI:188640-188902 9.59e-03 14_[-1(6.59e-05)]_65 chrXIV:102569-102883 9.79e-09 39_[-1(4.11e-07)]_1_[+3(4.31e-09)]_\ 18 chrXI:578826-579216 3.34e-07 58_[-2(1.67e-09)]_21 chrXIII:420523-420819 4.04e-05 19_[+1(6.45e-08)]_60 chrXII:797011-797333 2.51e-02 55_[-1(7.44e-06)]_24 chrX:204581-204914 1.08e-06 37_[-1(3.54e-06)]_20_[-2(1.72e-07)]_\ 1 chrVII:328419-328836 1.06e-08 5_[-1(7.44e-06)]_20_[-2(2.05e-10)]_\ 33 chrXV:571788-572118 5.14e-03 54_[-1(3.54e-06)]_25 chrII:226941-227253 6.10e-11 27_[-1(7.12e-09)]_[+3(1.77e-08)]_31 chrXV:288033-288344 4.38e-07 53_[-1(6.46e-06)]_2_[+3(2.50e-08)]_\ 3 chrII:350668-350955 3.46e-04 65_[-1(1.43e-07)]_14 chrVIII:148957-149235 4.51e-01 100 chrXIV:567993-568331 1.68e-11 2_[-1(1.20e-08)]_51_[-2(2.05e-10)]_\ 5 chrVII:779458-779753 7.41e-05 60_[-1(1.67e-08)]_19 chrIII:90750-91062 1.90e-04 2_[-1(2.62e-07)]_77 chrIII:123477-123787 2.18e-12 4_[+2(2.57e-13)]_20_[+1(1.04e-06)]_\ 34 chrIV:568719-569120 2.15e-16 32_[+3(1.35e-08)]_[-2(2.05e-10)]_26 chrVIII:475609-475924 1.04e-02 41_[+1(4.47e-06)]_38 chrX:396659-396960 5.72e-05 16_[+1(7.40e-08)]_63 chrXI:46663-46960 2.63e-07 24_[+1(5.95e-09)]_55 chrXI:162333-162709 2.15e-16 25_[+2(2.05e-10)]_[-3(1.35e-08)]_33 chrIV:992678-992972 6.10e-05 56_[-1(7.40e-08)]_23 chrXV:663678-664019 6.83e-09 23_[+2(1.57e-08)]_22_[+1(6.45e-08)]_\ 13 chrIV:1095304-1095611 4.66e-04 33_[+1(5.68e-07)]_46 chrVI:180806-181187 1.23e-10 37_[+2(1.17e-09)]_19_[+1(7.40e-08)]_\ 2 chrIX:370250-370560 1.11e-02 61_[-1(7.44e-06)]_18 chrIX:183345-183668 4.69e-05 36_[+1(7.12e-09)]_43 chrXV:282000-282325 4.41e-05 51_[-1(7.40e-08)]_28 chrVI:191475-191762 5.43e-05 24_[+1(7.12e-09)]_55 chrIV:83407-83697 2.00e-04 45_[-1(7.40e-08)]_34 chrIV:358123-358394 6.57e-01 100 chrXII:426964-427290 8.58e-03 54_[-1(3.54e-06)]_25 chrIV:619864-620182 1.33e-07 5_[+2(2.94e-07)]_21_[+1(2.94e-07)]_\ 32 chrXV:300928-301304 1.74e-05 30_[-1(1.20e-08)]_49 chrXII:734646-734955 3.05e-05 51_[-1(7.12e-09)]_28 chrXIII:747803-748133 1.61e-09 4_[-3(1.35e-08)]_75 chrIV:1450934-1451185 3.27e-01 100 chrXIII:195988-196310 2.99e-05 50_[+1(1.20e-08)]_29 chrVII:794268-794585 1.45e-05 40_[-1(2.78e-09)]_39 chrXV:594276-594590 1.46e-05 21_[+1(1.67e-08)]_58 chrI:166143-166424 1.16e-12 33_[-1(2.78e-09)]_21_[-2(3.33e-11)]_\ 4 chrXIII:480504-480852 3.00e-17 2_[+2(8.03e-11)]_[-3(2.38e-09)]_\ [+1(3.63e-08)]_35 chrXI:74461-74770 1.06e-03 58_[-1(4.11e-07)]_21 chrXV:113651-113967 2.51e-10 42_[-1(4.21e-08)]_[+3(5.90e-10)]_16 chrXVI:302703-302972 9.41e-01 100 chrXIV:442867-443213 1.90e-04 15_[-1(2.62e-07)]_64 chrVII:531476-531780 1.08e-06 31_[-1(3.54e-06)]_20_[-2(1.72e-07)]_\ 7 chrV:131031-131312 1.09e-03 11_[+1(1.43e-07)]_68 chrXVI:572104-572442 1.65e-04 45_[-1(7.40e-08)]_34 chrXIII:586560-586879 1.40e-04 19_[+1(6.45e-08)]_60 chrXIV:444488-444758 4.10e-01 100 chrXI:219738-220030 1.11e-05 60_[-1(1.22e-09)]_19 chrXII:875234-875536 2.14e-04 40_[-1(5.11e-07)]_39 chrXVI:880197-880527 6.30e-05 36_[+1(7.12e-09)]_43 chrV:438556-438837 8.42e-05 53_[-1(6.45e-08)]_26 chrIII:178365-178614 9.95e-01 100 chrXIII:372379-372648 2.00e-04 34_[+1(6.45e-08)]_45 chrVII:366122-366385 3.75e-01 100 chrVIII:175096-175343 3.49e-01 100 chrVII:857312-857642 1.62e-04 43_[+1(2.62e-07)]_36 chrXII:214781-215083 1.23e-12 10_[+2(3.33e-11)]_21_[+1(2.78e-09)]_\ 27 chrXII:656861-657145 6.55e-07 32_[+1(1.22e-09)]_47 chrV:487244-487526 1.05e-08 5_[+2(2.05e-10)]_20_[+1(7.44e-06)]_\ 33 chrXVI:378694-378949 2.90e-01 100 chrX:531689-532013 1.32e-10 26_[-1(7.40e-08)]_19_[-2(1.17e-09)]_\ 13 chrXIV:374741-374994 5.04e-04 51_[-1(5.68e-07)]_28 chrX:517748-518041 2.77e-03 19_[+1(5.59e-06)]_60 chrXI:84050-84328 7.27e-05 68_[-1(1.62e-07)]_11 chrVII:122137-122430 3.00e-17 35_[-1(3.63e-08)]_[+3(2.38e-09)]_\ [-2(8.03e-11)]_2 chrV:435678-435948 3.59e-10 19_[-3(2.38e-09)]_[+1(3.63e-08)]_39 chrV:354782-355060 2.20e-02 62_[-1(7.44e-06)]_17 chrXI:513270-513542 2.12e-03 26_[+1(3.54e-06)]_53 chrX:354132-354415 5.57e-12 20_[-1(6.46e-06)]_2_[+3(3.19e-08)]_\ 14_[-2(1.19e-08)]_1 chrXVI:56101-56372 1.63e-03 67_[+1(4.47e-06)]_12 chrXIV:632472-632743 5.14e-10 41_[-1(4.11e-07)]_1_[+3(4.31e-09)]_\ 16 chrXVI:810549-810862 8.11e-14 20_[-1(4.11e-07)]_1_[+3(4.31e-09)]_\ [-2(1.57e-08)]_16 chrVII:700504-701190 9.09e-01 100 chrV:135281-135624 3.00e-17 32_[+2(8.03e-11)]_[-3(2.38e-09)]_\ [+1(3.63e-08)]_5 chrXIII:321058-321361 6.81e-08 39_[+1(1.22e-09)]_40 chrXIII:504725-505084 1.90e-04 40_[-1(2.62e-07)]_39 chrXIII:463413-463681 7.83e-03 56_[-1(3.54e-06)]_23 chrX:541391-541679 1.08e-06 22_[-1(3.54e-06)]_20_[-2(1.72e-07)]_\ 16 chrV:443120-443376 2.43e-12 13_[+2(6.74e-11)]_22_[+1(7.12e-09)]_\ 23 chrXI:458439-458812 4.82e-02 100 chrXV:710041-710326 2.38e-02 67_[-1(5.59e-06)]_12 chrIV:519630-519891 1.74e-09 32_[-1(1.62e-07)]_1_[+3(2.72e-08)]_\ 25 chrI:81994-82226 5.27e-01 100 chrXIII:168701-168988 4.43e-12 [-1(6.46e-06)]_2_[+3(2.50e-08)]_14_\ [-2(1.19e-08)]_21 chrIV:434183-434442 2.07e-16 11_[+2(2.10e-09)]_[-3(5.90e-10)]_\ [+1(4.21e-08)]_26 chrIV:217200-217479 2.26e-02 76_[+2(8.74e-05)]_3 chrIV:1352383-1352658 3.00e-17 5_[+2(8.03e-11)]_[-3(2.38e-09)]_\ [+1(3.63e-08)]_32 chrVI:226598-226876 3.00e-17 10_[+2(8.03e-11)]_[-3(2.38e-09)]_\ [+1(3.63e-08)]_27 chrVIII:466902-467128 2.66e-08 24_[-1(1.43e-07)]_20_[-2(8.29e-08)]_\ 14 chrX:607889-608131 8.46e-01 100 chrIV:491006-491242 9.64e-01 100 chrIV:884211-884584 9.53e-06 13_[-1(3.39e-09)]_66 chrII:9446-9715 1.74e-09 52_[-1(1.62e-07)]_1_[+3(2.72e-08)]_\ 5 chrV:551221-551465 3.66e-13 1_[+2(6.74e-11)]_22_[+1(7.12e-09)]_\ 35 chrVII:185590-185917 3.00e-17 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chrII:6801-7161 6.60e-01 100 chrI:142986-143346 9.18e-01 100 chrXV:760583-760943 9.51e-01 100 chrIV:436351-436711 6.81e-01 100 chrXV:1054290-1054650 8.49e-01 100 chrXIV:550089-550449 7.87e-01 100 chrXI:432014-432374 7.26e-01 100 chrXIV:174181-174541 5.42e-01 100 chrX:216030-216390 5.40e-01 100 chrXIII:875901-876261 3.93e-01 100 chrXIV:414064-414424 1.12e-01 31_[-2(7.82e-05)]_48 chrX:669880-670240 6.46e-02 100 chrXII:1017924-1018284 9.62e-01 100 chrX:417545-417905 3.90e-01 100 chrVII:1039-1399 9.31e-01 100 chrIV:117867-118227 1.00e+00 100 chrVII:550302-550662 8.65e-01 100 chrVII:501177-501537 8.41e-02 100 chrXII:499206-499566 4.71e-01 100 chrXV:445800-446160 4.56e-01 100 chrI:142327-142687 4.08e-01 100 chrXVI:286658-287018 7.78e-01 100 chrVIII:34442-34802 2.44e-01 100 chrIV:845925-846285 4.89e-01 100 chrIV:903786-904146 7.44e-01 100 chrII:255105-255465 2.51e-01 100 chrXVI:194118-194478 9.84e-01 100 chrVII:364831-365191 9.84e-01 100 chrXIV:331444-331804 5.19e-01 100 chrXIV:722662-723022 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chrXV:251762-252122 9.78e-01 100 chrXVI:574990-575350 9.96e-01 100 chrXIV:331661-332021 8.43e-01 100 chrV:100845-101205 1.73e-01 100 chrXVI:404593-404953 6.57e-01 100 chrIV:673652-674012 3.63e-01 100 chrIV:78796-79156 6.94e-01 100 chrIV:79052-79412 9.49e-01 100 chrXII:806085-806445 1.80e-01 100 chrXII:209128-209488 1.67e-01 100 chrXV:1071092-1071452 8.00e-01 100 chrIV:327932-328292 5.81e-01 100 chrX:651916-652276 3.02e-01 100 chrXV:964715-965075 9.95e-01 100 chrXV:231747-232107 6.61e-01 100 chrIX:192381-192741 8.03e-01 100 chrVII:278228-278588 9.85e-01 100 chrXII:712521-712881 5.43e-01 100 chrXII:499407-499767 8.03e-01 100 chrXV:964422-964782 2.23e-01 100 chrIV:118087-118447 7.56e-02 100 chrVII:481643-482003 9.07e-02 100 chrIV:668065-668425 1.57e-01 100 chrXVI:575207-575567 4.51e-01 100 chrVI:101521-101881 7.99e-01 100 chrXV:1071319-1071679 3.32e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************