******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--MAC1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrXI:618815-619192 1.0000 100 chrVII:122139-122462 1.0000 100 chrXII:242457-242827 1.0000 100 chrXI:74460-74787 1.0000 100 chrIV:836105-836279 1.0000 100 chrXII:796409-796848 1.0000 100 chrXII:897740-898018 1.0000 100 chrIV:1403112-1403482 1.0000 100 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1.0000 100 chrIV:229532-229759 1.0000 100 chrVII:541691-542082 1.0000 100 chrXI:382219-382431 1.0000 100 chrIV:387822-388192 1.0000 100 chrXVI:560075-560454 1.0000 100 chrXIII:480521-480848 1.0000 100 chrXII:903341-903711 1.0000 100 chrVIII:116009-116353 1.0000 100 chrVII:555336-555681 1.0000 100 chrXV:946905-947275 1.0000 100 chrXIII:732056-732382 1.0000 100 chrXIII:499576-499946 1.0000 100 chrVII:916186-916556 1.0000 100 chrXII:47636-48006 1.0000 100 chrXII:214795-215085 1.0000 100 chrXI:551949-552319 1.0000 100 chrV:362896-363266 1.0000 100 chrXII:233254-233476 1.0000 100 chrIII:292717-293087 1.0000 100 chrXI:517820-518133 1.0000 100 chrIII:127554-127873 1.0000 100 chrV:86422-86791 1.0000 100 chrXII:460427-460831 1.0000 100 chrVII:115335-115700 1.0000 100 chrII:165144-165398 1.0000 100 chrXVI:252382-252752 1.0000 100 chrVII:345915-346285 1.0000 100 chrXI:334288-334658 1.0000 100 chrX:391875-391975 1.0000 100 chrI:170188-170558 1.0000 100 chrVIII:132946-133280 1.0000 100 chrVII:149126-149496 1.0000 100 chrXIII:754429-754745 1.0000 100 chrXVI:310371-310741 1.0000 100 chrVII:534811-535201 1.0000 100 chrXI:490804-491112 1.0000 100 chrX:157462-157562 1.0000 100 chrXV:594279-594583 1.0000 100 chrV:362230-362471 1.0000 100 chrVII:856772-856962 1.0000 100 chrXIII:808138-808472 1.0000 100 chrXV:779707-780185 1.0000 100 chrVII:405414-405642 1.0000 100 chrXIV:415119-415489 1.0000 100 chrXV:1005066-1005436 1.0000 100 chrIV:579083-579356 1.0000 100 chrII:626707-627077 1.0000 100 chrVII:738976-739283 1.0000 100 chrIX:174942-175146 1.0000 100 chrVII:726442-726761 1.0000 100 chrXI:313325-313593 1.0000 100 chrV:405935-406305 1.0000 100 chrX:531680-531780 1.0000 100 chrXVI:281636-281898 1.0000 100 chrVII:346136-346506 1.0000 100 chrXVI:378688-378945 1.0000 100 chrII:478862-479232 1.0000 100 chrXII:940760-941226 1.0000 100 chrXV:730743-731113 1.0000 100 chrIII:107258-107628 1.0000 100 chrXII:838649-838757 1.0000 100 chrXV:464352-464626 1.0000 100 chrV:117737-118223 1.0000 100 chrVIII:34756-35126 1.0000 100 chrXII:793745-794072 1.0000 100 chrXII:924536-924906 1.0000 100 chrX:704205-704305 1.0000 100 chrII:266221-266611 1.0000 100 chrVIII:147951-148321 1.0000 100 chrXIII:63752-64122 1.0000 100 chrVII:794268-794577 1.0000 100 chrXII:448537-448874 1.0000 100 chrV:131014-131319 1.0000 100 chrXII:1028241-1028557 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--MAC1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--MAC1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--MAC1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 591 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 59093 N= 591 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.298 C 0.202 G 0.202 T 0.298 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--MAC1/background): A 0.308 C 0.192 G 0.192 T 0.308 ******************************************************************************** ******************************************************************************** MOTIF BTTGGCCSAGTKGKTWRAGS MEME-1 width = 20 sites = 98 llr = 1724 E-value = 5.3e-359 ******************************************************************************** -------------------------------------------------------------------------------- Motif BTTGGCCSAGTKGKTWRAGS MEME-1 Description -------------------------------------------------------------------------------- Simplified A 12:2:::2a2:::::765:: pos.-specific C 3::::a65::12::2:12:7 probability G 22:8a:23:8:4a61:43a3 matrix T 46a:::2:::94:473:::: bits 2.4 ** * * 2.1 ** * * 1.9 ** * * 1.7 * ** ** * * Relative 1.4 **** *** * ** Entropy 1.2 **** *** ** ** (25.4 bits) 1.0 ***** *** ** ** 0.7 ********* ** ** ** 0.5 ******************* 0.2 ******************** 0.0 -------------------- Multilevel TTTGGCCCAGTTGGTAAAGC consensus CA G G T TGG G sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BTTGGCCSAGTKGKTWRAGS MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------- chrVII:738976-739283 + 48 6.51e-11 AAATAGGTCT CTTGGCCCAGTTGGTTAAGG CACCGTGCTA chrV:551199-551481 - 44 6.51e-11 TTACAGGTCT CTTGGCCCAGTTGGTTAAGG CACCGTGCTA chrIX:183352-183677 - 25 6.51e-11 TTCCTGGTCT CTTGGCCCAGTTGGTTAAGG CACCGTGCTA chrV:443131-443386 - 43 6.51e-11 AATTTGGTCT CTTGGCCCAGTTGGTTAAGG CACCGTGCTA chrXII:734656-734972 + 43 6.51e-11 AGTTTGGTCT CTTGGCCCAGTTGGTTAAGG CACCGTGCTA chrXVI:880193-880540 - 29 6.51e-11 ATAATGGTCT CTTGGCCCAGTTGGTTAAGG CACCGTGCTA chrXIV:569795-569995 - 71 6.51e-11 ACAGTGGTCT CTTGGCCCAGTTGGTTAAGG CACCGTGCTA chrXVI:819353-819692 + 62 6.51e-11 AGAATGGTCT CTTGGCCCAGTTGGTTAAGG CACCGTGCTA chrII:197333-197635 + 65 6.51e-11 ATCAAGGTCT CTTGGCCCAGTTGGTTAAGG CACCGTGCTA chrVIII:132946-133280 - 20 7.96e-11 TAAGTGGCAA CTTGGCCGAGTGGTTAAGGC GAAAGATTAG chrV:86422-86791 + 53 7.96e-11 GTTATGGCAA CTTGGCCGAGTGGTTAAGGC GAAAGATTAG chrII:226944-227284 + 16 7.96e-11 AACGAGGCAA CTTGGCCGAGTGGTTAAGGC GAAAGATTAG chrXII:167867-168188 - 24 7.96e-11 CATATGGCAA CTTGGCCGAGTGGTTAAGGC GAAAGATTAG chrIV:1305466-1305779 + 63 7.96e-11 ATTAAGGCAA CTTGGCCGAGTGGTTAAGGC GAAAGATTAG chrXIII:259047-259390 - 47 7.96e-11 AGTATGGCAA CTTGGCCGAGTGGTTAAGGC GAAAGATTAG chrVII:794268-794577 + 50 5.33e-10 ATTGCGGGCA CATGGCGCAGTTGGTAGCGC GCTTCCCTTG chrXII:214795-215085 - 41 5.33e-10 TTTTAGGGCA CATGGCGCAGTTGGTAGCGC GCTTCCCTTG chrV:311907-312247 - 44 5.33e-10 ATTCTGGGCA CATGGCGCAGTTGGTAGCGC GCTTCCCTTG chrXVI:689410-689797 + 17 8.54e-10 TTTTGGGCAC TATGGCCGAGTGGTTAAGGC GACAGACTTG chrV:288333-288690 - 39 8.54e-10 TGATAGGCAC TATGGCCGAGTGGTTAAGGC GACAGACTTG chrIII:227776-228154 + 32 8.54e-10 GAAATGGCAC TATGGCCGAGTGGTTAAGGC GAGAGACTCG chrX:617753-617853 + 54 9.92e-10 ACAATGGGAG TTTGGCCGAGTGGTTTAAGG CGTCAGATTT chrXII:731978-732275 + 19 9.92e-10 ACAATGGGAG TTTGGCCGAGTGGTTTAAGG CGTCAGATTT chrXII:592419-592736 - 68 9.92e-10 ACAATGGGAG TTTGGCCGAGTGGTTTAAGG CGTCAGATTT chrII:266221-266611 + 17 1.52e-09 AAACTGCTTC TATGGCCAAGTTGGTAAGGC GCCACACTAG chrIX:174942-175146 + 42 1.52e-09 TACGAGCTTC TATGGCCAAGTTGGTAAGGC GCCACACTAG chrVIII:116009-116353 - 24 1.52e-09 ATAGAGCTTC TATGGCCAAGTTGGTAAGGC GCCACACTAG chrXIV:104651-104981 + 44 1.52e-09 TCTGAGCTTC TATGGCCAAGTTGGTAAGGC GCCACACTAG chrXV:113643-113953 + 59 1.52e-09 ATTTAGCTTC TATGGCCAAGTTGGTAAGGC GCCACACTAG chrIV:434196-434441 - 44 1.52e-09 CAGAAGCTTC TATGGCCAAGTTGGTAAGGC GCCACACTAG chrX:59034-59134 - 24 1.52e-09 TAGAAGCTTC TATGGCCAAGTTGGTAAGGC GCCACACTAG chrXV:353933-354276 - 35 1.52e-09 TTACTGCTTC TATGGCCAAGTTGGTAAGGC GCCACACTAG chrIV:519634-519885 + 39 2.26e-09 TTTACGGAGG GTTGGCCGAGTGGTCTAAGG CGGCAGACTT chrXII:962884-963219 - 30 2.26e-09 TCGACGGAGG GTTGGCCGAGTGGTCTAAGG CGGCAGACTT chrX:424364-424464 - 16 2.26e-09 AAGATGGAGG GTTGGCCGAGTGGTCTAAGG CGGCAGACTT chrXIV:726068-726315 - 52 2.26e-09 TCTTTGGAGG GTTGGCCGAGTGGTCTAAGG CGGCAGACTT chrII:9457-9732 + 44 2.26e-09 TTCGTGGAGG GTTGGCCGAGTGGTCTAAGG CGGCAGACTT chrXI:84045-84363 + 59 2.26e-09 TGTATGGAGG GTTGGCCGAGTGGTCTAAGG CGGCAGACTT chrVII:115335-115700 + 26 2.89e-09 ACTCATCCTT GTTAGCTCAGTTGGTAGAGC GTTCGGCTTT chrXV:438479-438859 + 29 2.89e-09 ACTCATCCTT GTTAGCTCAGTTGGTAGAGC GTTCGGCTTT chrXII:875224-875570 + 34 2.89e-09 ACTCATCCTT GTTAGCTCAGTTGGTAGAGC GTTCGGCTTT chrXVI:769095-769486 - 38 2.89e-09 ACTCATCCTT GTTAGCTCAGTTGGTAGAGC GTTCGGCTTT chrIII:127554-127873 + 58 3.26e-09 AAAATGACTC CATGGCCAAGTTGGTTAAGG CGTGCGACTG chrXVI:810562-810807 + 47 3.26e-09 TTTGCGACTC CATGGCCAAGTTGGTTAAGG CGTGCGACTG chrVI:137332-137693 - 73 3.26e-09 ACTGACTC CATGGCCAAGTTGGTTAAGG CGTGCGACTG chrXIV:632471-632737 + 50 3.26e-09 AAAGTGACTC CATGGCCAAGTTGGTTAAGG CGTGCGACTG chrVII:730970-731324 + 45 3.26e-09 AAAAAGACTC CATGGCCAAGTTGGTTAAGG CGTGCGACTG chrXV:228160-228487 + 63 3.26e-09 TATTAGACTC CATGGCCAAGTTGGTTAAGG CGTGCGACTG chrXIV:102554-102937 + 26 3.26e-09 TATAAGACTC CATGGCCAAGTTGGTTAAGG CGTGCGACTG chrXI:74460-74787 + 56 3.26e-09 AATTAGACTC CATGGCCAAGTTGGTTAAGG CGTGCGACTG chrIV:1150734-1151110 - 45 4.63e-09 TTTCAGTCCC AGTGGCCGAGTGGTTAAGGC GATGCCTGCT chrXV:274505-274863 + 44 4.63e-09 ATCGTGTCCC AGTGGCCGAGTGGTTAAGGC GATGCCCTGC chrVI:191471-191737 - 35 4.63e-09 ATTCTGTCCC AGTGGCCGAGTGGTTAAGGC GATGCCCTGC chrXII:784213-784555 + 25 4.63e-09 CAACCGTCCC AGTGGCCGAGTGGTTAAGGC GATGCCTGCT chrXIII:480521-480848 - 35 5.16e-09 AAGTAGCCTT GTTGGCGCAATCGGTAGCGC GTATGACTCT chrVII:876230-876573 + 48 5.16e-09 GAATAGCCTT GTTGGCGCAATCGGTAGCGC GTATGACTCT chrVI:226601-226882 - 45 5.16e-09 AAAATGCCTT GTTGGCGCAATCGGTAGCGC GTATGACTCT chrX:414817-414917 + 42 5.16e-09 AATTAGCCTT GTTGGCGCAATCGGTAGCGC GTATGACTCT chrXVI:581905-582223 + 53 5.16e-09 AAAGAGCCTT GTTGGCGCAATCGGTAGCGC GTATGACTCT chrIII:151207-151518 - 20 5.16e-09 AAAGAGCCTT GTTGGCGCAATCGGTAGCGC GTATGACTCT chrIV:1352381-1352666 - 41 5.16e-09 AAATAGCCTT GTTGGCGCAATCGGTAGCGC GTATGACTCT chrIX:300131-300459 - 31 5.16e-09 AAATAGCCTT GTTGGCGCAATCGGTAGCGC GTATGACTCT chrVII:185592-185918 - 57 5.16e-09 AAATAGCCTT GTTGGCGCAATCGGTAGCGC GTATGACTCT chrIV:1201587-1201930 + 47 5.16e-09 AAATAGCCTT GTTGGCGCAATCGGTAGCGC GTATGACTCT chrV:135298-135610 - 69 5.16e-09 AAAAAGCCTT GTTGGCGCAATCGGTAGCGC GTATGACTCT chrV:435670-435946 - 42 5.16e-09 TAAGAGCCTT GTTGGCGCAATCGGTAGCGC GTATGACTCT chrVII:122139-122462 + 24 5.16e-09 AATTAGCCTT GTTGGCGCAATCGGTAGCGC GTATGACTCT chrXIV:374732-375007 + 55 8.70e-09 AATAAGCGGA CTTAGCTCAGTTGGGAGAGC GCCAGACTGA chrIV:1095274-1095617 - 42 8.70e-09 TGTTAGCGGA CTTAGCTCAGTTGGGAGAGC GCCAGACTGA chrXVI:560075-560454 - 51 1.27e-08 ATTGAGCGGA TTTAGCTCAGTTGGGAGAGC GCCAGACTGA chrXII:605207-605581 - 64 1.27e-08 AAAATGCTCG TGTAGCTCAGTGGTTAGAGC TTCGTGCTTA chrII:36243-36557 + 53 1.27e-08 TGTAAGCGGA TTTAGCTCAGTTGGGAGAGC GCCAGACTGA chrIV:884218-884587 + 14 1.27e-08 AAAATGCTCG TGTAGCTCAGTGGTTAGAGC TTCGTGCTTA chrVI:157859-158181 - 13 1.27e-08 TAGAAGCGGA TTTAGCTCAGTTGGGAGAGC GCCAGACTGA chrVII:440633-440973 - 30 1.27e-08 TATATGCGGA TTTAGCTCAGTTGGGAGAGC GCCAGACTGA chrXVI:622439-622807 - 34 1.27e-08 GATATGCGGA TTTAGCTCAGTTGGGAGAGC GCCAGACTGA chrVIII:358373-358729 - 44 1.27e-08 AGTAAGCGGA TTTAGCTCAGTTGGGAGAGC GCCAGACTGA chrXIII:352121-352432 + 59 1.27e-08 TATAAGCGGA TTTAGCTCAGTTGGGAGAGC GCCAGACTGA chrVIII:237738-238095 - 49 1.27e-08 AGTAAGCGGA TTTAGCTCAGTTGGGAGAGC GCCAGACTGA chrVII:205367-205715 + 35 1.66e-08 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGG CGCCTGATTC chrXII:628217-628603 + 28 1.66e-08 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGG CGCCTGATTC chrVII:857294-857650 - 45 1.66e-08 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGG CGCCTGATTC chrVII:422913-423295 + 43 1.66e-08 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGG CGCCTGATTC chrXIII:504721-505086 + 47 1.66e-08 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGG CGCCTGATTC chrIII:90749-91061 + 9 1.66e-08 ATTGGTTG TTTGGCCGAGCGGTCTAAGG CGCCTGATTC chrXIV:442850-443226 + 23 1.66e-08 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGG CGCCTGATTC chrXIII:504721-505084 + 48 1.66e-08 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGG CGCCTGATTC chrXI:490804-491112 + 65 2.51e-08 TCTTGTTCCT CGTGGCCCAATGGTCACGGC GTCTGGCTAC chrXV:340190-340528 - 38 2.51e-08 ATCTGTTCCT CGTGGCCCAATGGTCACGGC GTCTGGCTAC chrXII:374183-374536 + 51 2.51e-08 TCTTGTTCCT CGTGGCCCAATGGTCACGGC GTCTGGCTAC chrIV:619860-620181 - 47 2.51e-08 TCTTGTTCCT CGTGGCCCAATGGTCACGGC GTCTGGCTAC chrX:233768-233868 + 69 2.51e-08 TCTTGTTCCT CGTGGCCCAATGGTCACGGC GTCTGGCTAC chrXI:517820-518133 + 67 3.38e-08 ACTATGGGCG TGTGGCGTAGTCGGTAGCGC GCTCCCTTAG chrVII:774177-774588 + 22 3.38e-08 TAATTGGGCG TGTGGCGTAGTCGGTAGCGC GCTCCCTTAG chrX:197201-197301 - 38 3.38e-08 TATTAGGGCG TGTGGCGTAGTCGGTAGCGC GCTCCCTTAG chrXV:976355-976569 + 14 3.12e-07 TGTGCGCTTC AGTAGCTCAGTAGGAAGAGC GTCAGTCTCA chrXIII:572736-573119 - 54 3.12e-07 AGACAGCTTC AGTAGCTCAGTAGGAAGAGC GTCAGTCTCA chrX:390940-391040 - 27 3.12e-07 ATAGTGCTTC AGTAGCTCAGTAGGAAGAGC GTCAGTCTCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BTTGGCCSAGTKGKTWRAGS MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrVII:738976-739283 6.5e-11 47_[+1]_33 chrV:551199-551481 6.5e-11 43_[-1]_37 chrIX:183352-183677 6.5e-11 24_[-1]_56 chrV:443131-443386 6.5e-11 42_[-1]_38 chrXII:734656-734972 6.5e-11 42_[+1]_38 chrXVI:880193-880540 6.5e-11 28_[-1]_52 chrXIV:569795-569995 6.5e-11 70_[-1]_10 chrXVI:819353-819692 6.5e-11 61_[+1]_19 chrII:197333-197635 6.5e-11 64_[+1]_16 chrVIII:132946-133280 8e-11 19_[-1]_61 chrV:86422-86791 8e-11 52_[+1]_28 chrII:226944-227284 8e-11 15_[+1]_65 chrXII:167867-168188 8e-11 23_[-1]_57 chrIV:1305466-1305779 8e-11 62_[+1]_18 chrXIII:259047-259390 8e-11 46_[-1]_34 chrVII:794268-794577 5.3e-10 49_[+1]_31 chrXII:214795-215085 5.3e-10 40_[-1]_40 chrV:311907-312247 5.3e-10 43_[-1]_37 chrXVI:689410-689797 8.5e-10 16_[+1]_64 chrV:288333-288690 8.5e-10 38_[-1]_42 chrIII:227776-228154 8.5e-10 31_[+1]_49 chrX:617753-617853 9.9e-10 53_[+1]_27 chrXII:731978-732275 9.9e-10 18_[+1]_62 chrXII:592419-592736 9.9e-10 67_[-1]_13 chrII:266221-266611 1.5e-09 16_[+1]_64 chrIX:174942-175146 1.5e-09 41_[+1]_39 chrVIII:116009-116353 1.5e-09 23_[-1]_57 chrXIV:104651-104981 1.5e-09 43_[+1]_37 chrXV:113643-113953 1.5e-09 58_[+1]_22 chrIV:434196-434441 1.5e-09 43_[-1]_37 chrX:59034-59134 1.5e-09 23_[-1]_57 chrXV:353933-354276 1.5e-09 34_[-1]_46 chrIV:519634-519885 2.3e-09 38_[+1]_42 chrXII:962884-963219 2.3e-09 29_[-1]_51 chrX:424364-424464 2.3e-09 15_[-1]_65 chrXIV:726068-726315 2.3e-09 51_[-1]_29 chrII:9457-9732 2.3e-09 43_[+1]_37 chrXI:84045-84363 2.3e-09 58_[+1]_22 chrVII:115335-115700 2.9e-09 25_[+1]_55 chrXV:438479-438859 2.9e-09 28_[+1]_52 chrXII:875224-875570 2.9e-09 33_[+1]_47 chrXVI:769095-769486 2.9e-09 37_[-1]_43 chrIII:127554-127873 3.3e-09 57_[+1]_23 chrXVI:810562-810807 3.3e-09 46_[+1]_34 chrVI:137332-137693 3.3e-09 72_[-1]_8 chrXIV:632471-632737 3.3e-09 49_[+1]_31 chrVII:730970-731324 3.3e-09 44_[+1]_36 chrXV:228160-228487 3.3e-09 62_[+1]_18 chrXIV:102554-102937 3.3e-09 25_[+1]_55 chrXI:74460-74787 3.3e-09 55_[+1]_25 chrIV:1150734-1151110 4.6e-09 44_[-1]_36 chrXV:274505-274863 4.6e-09 43_[+1]_37 chrVI:191471-191737 4.6e-09 34_[-1]_46 chrXII:784213-784555 4.6e-09 24_[+1]_56 chrXIII:480521-480848 5.2e-09 34_[-1]_46 chrVII:876230-876573 5.2e-09 47_[+1]_33 chrVI:226601-226882 5.2e-09 44_[-1]_36 chrX:414817-414917 5.2e-09 41_[+1]_39 chrXVI:581905-582223 5.2e-09 52_[+1]_28 chrIII:151207-151518 5.2e-09 19_[-1]_61 chrIV:1352381-1352666 5.2e-09 40_[-1]_40 chrIX:300131-300459 5.2e-09 30_[-1]_50 chrVII:185592-185918 5.2e-09 56_[-1]_24 chrIV:1201587-1201930 5.2e-09 46_[+1]_34 chrV:135298-135610 5.2e-09 68_[-1]_12 chrV:435670-435946 5.2e-09 41_[-1]_39 chrVII:122139-122462 5.2e-09 23_[+1]_57 chrXIV:374732-375007 8.7e-09 54_[+1]_26 chrIV:1095274-1095617 8.7e-09 41_[-1]_39 chrXVI:560075-560454 1.3e-08 50_[-1]_30 chrXII:605207-605581 1.3e-08 63_[-1]_17 chrII:36243-36557 1.3e-08 52_[+1]_28 chrIV:884218-884587 1.3e-08 13_[+1]_67 chrVI:157859-158181 1.3e-08 12_[-1]_68 chrVII:440633-440973 1.3e-08 29_[-1]_51 chrXVI:622439-622807 1.3e-08 33_[-1]_47 chrVIII:358373-358729 1.3e-08 43_[-1]_37 chrXIII:352121-352432 1.3e-08 58_[+1]_22 chrVIII:237738-238095 1.3e-08 48_[-1]_32 chrVII:205367-205715 1.7e-08 34_[+1]_46 chrXII:628217-628603 1.7e-08 27_[+1]_53 chrVII:857294-857650 1.7e-08 44_[-1]_36 chrVII:422913-423295 1.7e-08 42_[+1]_38 chrXIII:504721-505086 1.7e-08 46_[+1]_34 chrIII:90749-91061 1.7e-08 8_[+1]_72 chrXIV:442850-443226 1.7e-08 22_[+1]_58 chrXIII:504721-505084 1.7e-08 47_[+1]_33 chrXI:490804-491112 2.5e-08 64_[+1]_16 chrXV:340190-340528 2.5e-08 37_[-1]_43 chrXII:374183-374536 2.5e-08 50_[+1]_30 chrIV:619860-620181 2.5e-08 46_[-1]_34 chrX:233768-233868 2.5e-08 68_[+1]_12 chrXI:517820-518133 3.4e-08 66_[+1]_14 chrVII:774177-774588 3.4e-08 21_[+1]_59 chrX:197201-197301 3.4e-08 37_[-1]_43 chrXV:976355-976569 3.1e-07 13_[+1]_67 chrXIII:572736-573119 3.1e-07 53_[-1]_27 chrX:390940-391040 3.1e-07 26_[-1]_54 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BTTGGCCSAGTKGKTWRAGS MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF BTTGGCCSAGTKGKTWRAGS width=20 seqs=98 chrVII:738976-739283 ( 48) CTTGGCCCAGTTGGTTAAGG 1 chrV:551199-551481 ( 44) CTTGGCCCAGTTGGTTAAGG 1 chrIX:183352-183677 ( 25) CTTGGCCCAGTTGGTTAAGG 1 chrV:443131-443386 ( 43) CTTGGCCCAGTTGGTTAAGG 1 chrXII:734656-734972 ( 43) CTTGGCCCAGTTGGTTAAGG 1 chrXVI:880193-880540 ( 29) CTTGGCCCAGTTGGTTAAGG 1 chrXIV:569795-569995 ( 71) CTTGGCCCAGTTGGTTAAGG 1 chrXVI:819353-819692 ( 62) CTTGGCCCAGTTGGTTAAGG 1 chrII:197333-197635 ( 65) CTTGGCCCAGTTGGTTAAGG 1 chrVIII:132946-133280 ( 20) CTTGGCCGAGTGGTTAAGGC 1 chrV:86422-86791 ( 53) CTTGGCCGAGTGGTTAAGGC 1 chrII:226944-227284 ( 16) CTTGGCCGAGTGGTTAAGGC 1 chrXII:167867-168188 ( 24) CTTGGCCGAGTGGTTAAGGC 1 chrIV:1305466-1305779 ( 63) CTTGGCCGAGTGGTTAAGGC 1 chrXIII:259047-259390 ( 47) CTTGGCCGAGTGGTTAAGGC 1 chrVII:794268-794577 ( 50) CATGGCGCAGTTGGTAGCGC 1 chrXII:214795-215085 ( 41) CATGGCGCAGTTGGTAGCGC 1 chrV:311907-312247 ( 44) CATGGCGCAGTTGGTAGCGC 1 chrXVI:689410-689797 ( 17) TATGGCCGAGTGGTTAAGGC 1 chrV:288333-288690 ( 39) TATGGCCGAGTGGTTAAGGC 1 chrIII:227776-228154 ( 32) TATGGCCGAGTGGTTAAGGC 1 chrX:617753-617853 ( 54) TTTGGCCGAGTGGTTTAAGG 1 chrXII:731978-732275 ( 19) TTTGGCCGAGTGGTTTAAGG 1 chrXII:592419-592736 ( 68) TTTGGCCGAGTGGTTTAAGG 1 chrII:266221-266611 ( 17) TATGGCCAAGTTGGTAAGGC 1 chrIX:174942-175146 ( 42) TATGGCCAAGTTGGTAAGGC 1 chrVIII:116009-116353 ( 24) TATGGCCAAGTTGGTAAGGC 1 chrXIV:104651-104981 ( 44) TATGGCCAAGTTGGTAAGGC 1 chrXV:113643-113953 ( 59) TATGGCCAAGTTGGTAAGGC 1 chrIV:434196-434441 ( 44) TATGGCCAAGTTGGTAAGGC 1 chrX:59034-59134 ( 24) TATGGCCAAGTTGGTAAGGC 1 chrXV:353933-354276 ( 35) TATGGCCAAGTTGGTAAGGC 1 chrIV:519634-519885 ( 39) GTTGGCCGAGTGGTCTAAGG 1 chrXII:962884-963219 ( 30) GTTGGCCGAGTGGTCTAAGG 1 chrX:424364-424464 ( 16) GTTGGCCGAGTGGTCTAAGG 1 chrXIV:726068-726315 ( 52) GTTGGCCGAGTGGTCTAAGG 1 chrII:9457-9732 ( 44) GTTGGCCGAGTGGTCTAAGG 1 chrXI:84045-84363 ( 59) GTTGGCCGAGTGGTCTAAGG 1 chrVII:115335-115700 ( 26) GTTAGCTCAGTTGGTAGAGC 1 chrXV:438479-438859 ( 29) GTTAGCTCAGTTGGTAGAGC 1 chrXII:875224-875570 ( 34) GTTAGCTCAGTTGGTAGAGC 1 chrXVI:769095-769486 ( 38) GTTAGCTCAGTTGGTAGAGC 1 chrIII:127554-127873 ( 58) CATGGCCAAGTTGGTTAAGG 1 chrXVI:810562-810807 ( 47) CATGGCCAAGTTGGTTAAGG 1 chrVI:137332-137693 ( 73) CATGGCCAAGTTGGTTAAGG 1 chrXIV:632471-632737 ( 50) CATGGCCAAGTTGGTTAAGG 1 chrVII:730970-731324 ( 45) CATGGCCAAGTTGGTTAAGG 1 chrXV:228160-228487 ( 63) CATGGCCAAGTTGGTTAAGG 1 chrXIV:102554-102937 ( 26) CATGGCCAAGTTGGTTAAGG 1 chrXI:74460-74787 ( 56) CATGGCCAAGTTGGTTAAGG 1 chrIV:1150734-1151110 ( 45) AGTGGCCGAGTGGTTAAGGC 1 chrXV:274505-274863 ( 44) AGTGGCCGAGTGGTTAAGGC 1 chrVI:191471-191737 ( 35) AGTGGCCGAGTGGTTAAGGC 1 chrXII:784213-784555 ( 25) AGTGGCCGAGTGGTTAAGGC 1 chrXIII:480521-480848 ( 35) GTTGGCGCAATCGGTAGCGC 1 chrVII:876230-876573 ( 48) GTTGGCGCAATCGGTAGCGC 1 chrVI:226601-226882 ( 45) GTTGGCGCAATCGGTAGCGC 1 chrX:414817-414917 ( 42) GTTGGCGCAATCGGTAGCGC 1 chrXVI:581905-582223 ( 53) GTTGGCGCAATCGGTAGCGC 1 chrIII:151207-151518 ( 20) GTTGGCGCAATCGGTAGCGC 1 chrIV:1352381-1352666 ( 41) GTTGGCGCAATCGGTAGCGC 1 chrIX:300131-300459 ( 31) GTTGGCGCAATCGGTAGCGC 1 chrVII:185592-185918 ( 57) GTTGGCGCAATCGGTAGCGC 1 chrIV:1201587-1201930 ( 47) GTTGGCGCAATCGGTAGCGC 1 chrV:135298-135610 ( 69) GTTGGCGCAATCGGTAGCGC 1 chrV:435670-435946 ( 42) GTTGGCGCAATCGGTAGCGC 1 chrVII:122139-122462 ( 24) GTTGGCGCAATCGGTAGCGC 1 chrXIV:374732-375007 ( 55) CTTAGCTCAGTTGGGAGAGC 1 chrIV:1095274-1095617 ( 42) CTTAGCTCAGTTGGGAGAGC 1 chrXVI:560075-560454 ( 51) TTTAGCTCAGTTGGGAGAGC 1 chrXII:605207-605581 ( 64) TGTAGCTCAGTGGTTAGAGC 1 chrII:36243-36557 ( 53) TTTAGCTCAGTTGGGAGAGC 1 chrIV:884218-884587 ( 14) TGTAGCTCAGTGGTTAGAGC 1 chrVI:157859-158181 ( 13) TTTAGCTCAGTTGGGAGAGC 1 chrVII:440633-440973 ( 30) TTTAGCTCAGTTGGGAGAGC 1 chrXVI:622439-622807 ( 34) TTTAGCTCAGTTGGGAGAGC 1 chrVIII:358373-358729 ( 44) TTTAGCTCAGTTGGGAGAGC 1 chrXIII:352121-352432 ( 59) TTTAGCTCAGTTGGGAGAGC 1 chrVIII:237738-238095 ( 49) TTTAGCTCAGTTGGGAGAGC 1 chrVII:205367-205715 ( 35) TTTGGCCGAGCGGTCTAAGG 1 chrXII:628217-628603 ( 28) TTTGGCCGAGCGGTCTAAGG 1 chrVII:857294-857650 ( 45) TTTGGCCGAGCGGTCTAAGG 1 chrVII:422913-423295 ( 43) TTTGGCCGAGCGGTCTAAGG 1 chrXIII:504721-505086 ( 47) TTTGGCCGAGCGGTCTAAGG 1 chrIII:90749-91061 ( 9) TTTGGCCGAGCGGTCTAAGG 1 chrXIV:442850-443226 ( 23) TTTGGCCGAGCGGTCTAAGG 1 chrXIII:504721-505084 ( 48) TTTGGCCGAGCGGTCTAAGG 1 chrXI:490804-491112 ( 65) CGTGGCCCAATGGTCACGGC 1 chrXV:340190-340528 ( 38) CGTGGCCCAATGGTCACGGC 1 chrXII:374183-374536 ( 51) CGTGGCCCAATGGTCACGGC 1 chrIV:619860-620181 ( 47) CGTGGCCCAATGGTCACGGC 1 chrX:233768-233868 ( 69) CGTGGCCCAATGGTCACGGC 1 chrXI:517820-518133 ( 67) TGTGGCGTAGTCGGTAGCGC 1 chrVII:774177-774588 ( 22) TGTGGCGTAGTCGGTAGCGC 1 chrX:197201-197301 ( 38) TGTGGCGTAGTCGGTAGCGC 1 chrXV:976355-976569 ( 14) AGTAGCTCAGTAGGAAGAGC 1 chrXIII:572736-573119 ( 54) AGTAGCTCAGTAGGAAGAGC 1 chrX:390940-391040 ( 27) AGTAGCTCAGTAGGAAGAGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BTTGGCCSAGTKGKTWRAGS MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 47864 bayes= 10.5278 E= 5.3e-359 -211 81 29 21 -46 -1326 -15 97 -1326 -1326 -1326 170 -67 -1326 207 -1326 -1326 -1326 238 -1326 -1326 238 -1326 -1326 -1326 167 1 -67 -92 138 67 -333 170 -1326 -1326 -1326 -75 -1326 209 -1326 -1326 -123 -1326 158 -333 -23 98 48 -1326 -1326 238 -1326 -1326 -1326 170 29 -333 1 -91 113 108 -1326 -1326 17 87 -191 101 -1326 81 1 47 -1326 -1326 -1326 238 -1326 -1326 177 85 -1326 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BTTGGCCSAGTKGKTWRAGS MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 98 E= 5.3e-359 0.071429 0.336735 0.234694 0.357143 0.224490 0.000000 0.173469 0.602041 0.000000 0.000000 0.000000 1.000000 0.193878 0.000000 0.806122 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.612245 0.193878 0.193878 0.163265 0.500000 0.306122 0.030612 1.000000 0.000000 0.000000 0.000000 0.183673 0.000000 0.816327 0.000000 0.000000 0.081633 0.000000 0.918367 0.030612 0.163265 0.377551 0.428571 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.622449 0.377551 0.030612 0.193878 0.102041 0.673469 0.653061 0.000000 0.000000 0.346939 0.561224 0.051020 0.387755 0.000000 0.540816 0.193878 0.265306 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.653061 0.346939 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BTTGGCCSAGTKGKTWRAGS MEME-1 regular expression -------------------------------------------------------------------------------- [TCG][TA]TGGCC[CG]AGT[TG]G[GT]T[AT][AG][AG]G[CG] -------------------------------------------------------------------------------- Time 339.85 secs. ******************************************************************************** ******************************************************************************** MOTIF GGRRTCGAACCSVKGAYCTYM MEME-2 width = 21 sites = 87 llr = 1428 E-value = 5.2e-262 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGRRTCGAACCSVKGAYCTYM MEME-2 Description -------------------------------------------------------------------------------- Simplified A 3:64:::aa::12:36:::13 pos.-specific C :::2:8:::a8532:157344 probability G 7a42::a::::34471111:: matrix T :::2a2::::21:4:342642 bits 2.4 * * * 2.1 * * * 1.9 * * * 1.7 * * **** Relative 1.4 * ******* * Entropy 1.2 ** ******* * (23.7 bits) 1.0 *** ******* * * 0.7 *** ******** * ** 0.5 *** *********** **** 0.2 *** ***************** 0.0 --------------------- Multilevel GGAATCGAACCCGGGACCTCC consensus A GG T GCTATT CTA sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRRTCGAACCSVKGAYCTYM MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXIV:631775-632035 + 2 1.53e-13 G GGACTCGAACCCGGGACCTCC CGCACCCTAA chrIII:123461-123791 + 12 1.53e-13 GGGCGAGCCG GGACTCGAACCCGGGACCTCC CGCACCCTAA chrIV:667873-668112 + 76 3.99e-11 GGTCTCTAGC GGGATCGAACCGCTGATCCCC GCGT chrV:551199-551481 + 6 3.99e-11 CTAGC GGGATCGAACCGCTGATCCCC GCGTTATTAG chrV:443131-443386 + 5 3.99e-11 TAGC GGGATCGAACCGCTGATCCCC GCGTTATTAG chrXII:734656-734972 - 80 3.99e-11 . GGGATCGAACCGCTGATCCCC GCGTTATTAG chrXIV:569795-569995 + 33 3.99e-11 GGTCTCTAGC GGGATCGAACCGCTGATCCCC GCGTTATTAG chrIX:210673-210826 - 8 3.99e-11 GGTCTCTAGC GGGATCGAACCGCTGATCCCC GCGTTAT chrXII:214795-215085 + 4 3.07e-10 ACC GGAATCGAACCGATGACCTCT TCCTTGCAAG chrV:311907-312247 + 7 3.07e-10 GCAACC GGAATCGAACCGATGACCTCT TCCTTGCAAG chrXIV:96106-96455 + 22 7.91e-10 GAGCGGTACG AGAATCGAACCCGTGTCCCCA CCTTGGAAGG chrXV:110875-111126 + 23 7.91e-10 GAGCGGTACG AGAATCGAACCCGTGTCCCCA CCTTGGAAGG chrXII:448537-448874 + 6 9.10e-10 TACCC GGATTCGAACCGGGGTTGTCC GGATCAAAAC chrVI:226601-226882 + 8 9.10e-10 CTGTAGG GGGCTCGAACCCCTAACCTTA TGATTAAGAG chrX:414817-414917 - 78 9.10e-10 GG GGGCTCGAACCCCTAACCTTA TGATTAAGAG chrIV:1352381-1352666 + 4 9.10e-10 AGG GGGCTCGAACCCCTAACCTTA TGATTAAGAG chrVII:185592-185918 + 20 9.10e-10 GCCCTGTAGG GGGCTCGAACCCCTAACCTTA TGATTAAGAG chrIV:802637-802871 + 38 9.10e-10 GGTCCTACCC GGATTCGAACCGGGGTTGTCC GGATCAAAAC chrV:135298-135610 + 32 9.10e-10 GCCCTGTAGG GGGCTCGAACCCCTAACCTTA TGATTAAGAG chrV:435670-435946 + 5 9.10e-10 TAGG GGGCTCGAACCCCTAACCTTA TGATTAAGAG chrIV:645106-645220 + 51 9.10e-10 GGTCCTACCC GGATTCGAACCGGGGTTGTCC GGATCAAAAC chrVII:122139-122462 - 60 9.10e-10 GCCCTGTAGG GGGCTCGAACCCCTAACCTTA TGATTAAGAG chrVII:774177-774588 - 58 1.06e-09 GGACGAGTCC GGAATCGAACCGGAGACCTCT CCCATGCTAA chrVIII:146141-146329 + 68 1.06e-09 GGACGAGTCC GGAATCGAACCGGAGACCTCT CCCATGCTAA chrX:197201-197301 + 1 1.06e-09 . GGAATCGAACCGGAGACCTCT CCCATGCTAA chrXVI:856894-857073 - 10 1.06e-09 GGACGAGTCC GGAATCGAACCGGAGACCTCT CCCATGCTA chrVII:405414-405642 - 32 1.40e-09 ACTCACGATG GGGGTCGAACCCATAATCTTC TGATTAGAAG chrVII:541691-542082 - 54 1.40e-09 TCCGATACGG GGAGTCGAACCCCGGTCTCCA CGGTGAAAGC chrII:405707-406107 - 61 1.40e-09 ACTCACGATG GGGGTCGAACCCATAATCTTC TGATTAGAAG chrIII:82404-82604 + 19 1.40e-09 TCCGATACGG GGAGTCGAACCCCGGTCTCCA CGGTGAAAGC chrXVI:210065-210426 + 8 1.40e-09 GATACGG GGAGTCGAACCCCGGTCTCCA CGGTGAAAGC chrX:374305-374405 + 40 1.40e-09 ACTCACGATG GGGGTCGAACCCATAATCTTC TGATTAGAAG chrV:176937-177352 - 45 1.40e-09 TCCGATACGG GGAGTCGAACCCCGGTCTCCA CGGTGAAAGC chrVII:828519-828962 + 44 1.40e-09 ACTCACGATG GGGGTCGAACCCATAATCTTC TGATTAGAAG chrV:487241-487529 + 7 1.40e-09 ATACGG GGAGTCGAACCCCGGTCTCCA CGGTGAAAGC chrVII:328427-328832 - 44 1.40e-09 TCCGATACGG GGAGTCGAACCCCGGTCTCCA CGGTGAAAGC chrV:138501-138918 - 47 1.40e-09 ACTCACGATG GGGGTCGAACCCATAATCTTC TGATTAGAAG chrXI:162331-162704 + 31 1.40e-09 ACTCACGATG GGGGTCGAACCCATAATCTTC TGATTAGAAG chrIV:568715-569131 - 49 1.40e-09 ACTCACGATG GGGGTCGAACCCATAATCTTC TGATTAGAAG chrX:355195-355295 - 30 1.40e-09 ACTCACGATG GGGGTCGAACCCATAATCTTC TGATTAGAAG chrX:531680-531780 - 18 1.86e-09 GCGCAAGCCC GGAATCGAACCGGGGGCCCAA CGATGGCAAC chrV:61763-62106 + 17 1.86e-09 GCGCAAGCCC GGAATCGAACCGGGGGCCCAA CGATGGCAAC chrXVI:572092-572479 - 73 1.86e-09 CAAGCCC GGAATCGAACCGGGGGCCCAA CGATGGCAAC chrVII:845476-845874 - 63 1.86e-09 GCGCAAGCCC GGAATCGAACCGGGGGCCCAA CGATGGCAAC chrIV:992684-992999 - 80 1.86e-09 . GGAATCGAACCGGGGGCCCAA CGATGGCAAC chrVIII:475616-475917 + 1 3.16e-09 . AGGATCGAACTCGGGACCTTT GCCGTGTGAA chrIV:1075362-1075692 + 6 3.16e-09 AACCG AGGATCGAACTCGGGACCTTT GCCGTGTGAA chrIV:488580-489023 + 57 4.07e-09 GATCCAACCG AGGTTCGAACTCGGGATCTTC GCCGTGTAAA chrII:266221-266611 - 53 4.61e-09 GCTTCCAATC GGATTTGAACCGATGATCTCC ACATTACTAG chrIX:174942-175146 - 78 4.61e-09 TC GGATTTGAACCGATGATCTCC ACATTACTAG chrXIV:104651-104981 - 80 4.61e-09 . GGATTTGAACCGATGATCTCC ACATTACTAG chrXIV:560602-560824 + 41 4.61e-09 GCTTCCAATC GGATTTGAACCGATGATCTCC ACATTACTAG chrX:538438-538538 - 65 4.61e-09 GTTCCGTACG GGACTCGAACCCGCAGTCTTC TCCTTAGGAG chrIV:434196-434441 + 7 4.61e-09 CCAATC GGATTTGAACCGATGATCTCC ACATTACTAG chrVII:823337-823663 - 74 5.22e-09 TCGCCC AGGATCGAACTGGGGACGTTC TGCGTGTTAA chrVII:412158-412527 + 13 5.22e-09 GATTTCGCCC AGGATCGAACTGGGGACGTTC TGCGTGTTAA chrXV:663683-664020 + 22 5.22e-09 GATTTCGCCC AGGATCGAACTGGGGACGTTC TGCGTGTTAA chrXIII:808138-808472 + 2 1.61e-08 C GGATTCGAACTGGGGTTGTTC GGATCAGAAC chrXI:578811-579225 - 61 2.43e-08 TCCTCATAGG GGGCTCGAACCCCTGACATTT CGGTATCCTT chrXV:340190-340528 + 1 2.96e-08 . GGACTTGAACCTGGAATCTTC TGGTTCGTAG chrIV:619860-620181 + 10 2.96e-08 TCCCCGCCA GGACTTGAACCTGGAATCTTC TGGTTCGTAG chrXV:976355-976569 - 50 1.29e-07 GCTCCAGGGG AGGTTCGAACTCTCGACCTTC AGATTATGAG chrXIII:572736-573119 + 17 1.29e-07 GCTCCAGGGG AGGTTCGAACTCTCGACCTTC AGATTATGAG chrVIII:466902-467143 - 58 2.03e-07 GCCACCTGCC AGAATTGAACTAGCGACCTTT GCATTACAAG chrXI:313325-313593 + 3 2.17e-07 CT AGAATCGAACCAGGGTTTCAT CGGCCACAAC chrVIII:62606-62926 - 79 2.17e-07 T AGAATCGAACCAGGGTTTCAT CGGCCACAAC chrVII:110430-110806 + 68 2.17e-07 GCCATCTCCT AGAATCGAACCAGGGTTTCAT CGGCCACAAC chrXIII:362935-363227 - 73 2.17e-07 ATCTCCT AGAATCGAACCAGGGTTTCAT CGGCCACAAC chrV:434474-434640 + 45 2.17e-07 GCCATCTCCT AGAATCGAACCAGGGTTTCAT CGGCCACAAC chrXIII:168706-169022 - 38 2.33e-07 CTCCCGGGGG CGAGTCGAACGCCCGATCTCA AGATTTCGTA chrX:354128-354228 - 52 2.33e-07 CTCCCGGGGG CGAGTCGAACGCCCGATCTCA AGATTTCGTA chrX:204573-204673 - 58 3.06e-07 TCCGCGACGG GGAATTGAACCCCGATCTGGC ACGCGACAAG chrX:541397-541497 - 68 3.06e-07 TCCGCGACGG GGAATTGAACCCCGATCTGGC ACGCGACAAG chrVII:544451-544805 + 10 3.06e-07 CCGCGACGG GGAATTGAACCCCGATCTGGC ACGCGACAAG chrXII:818488-818768 - 71 3.72e-07 CTCCTCCCG GGACTCGAACCCGGATCACAG CCACCGGAAG chrVI:137332-137693 + 35 3.97e-07 GACCCCAGTG AGGGTTGAACTCACGATCTTG CGATTAACAG chrXII:975868-976114 + 53 3.97e-07 GACCCCAGTG AGGGTTGAACTCACGATCTTG CGATTAACAG chrXIV:102554-102937 - 63 3.97e-07 GACCCCAGTG AGGGTTGAACTCACGATCTTG CGATTAACAG chrXVI:744127-744484 - 69 4.22e-07 GCCACCTGTC AGAATTGAACTAACGACCTTT GCATTACAAG chrVII:1004085-1004378 - 75 4.22e-07 CTGTC AGAATTGAACTAACGACCTTT GCATTACAAG chrVII:707018-707216 + 52 4.77e-07 GCTCGCACTC AGGATCGAACTAAGGACCAAC AGATTTGCAA chrII:226944-227284 - 61 6.40e-07 GACAACTGCA GGACTCGAACCTGCGCGGGCA AAGCCCAAAA chrVII:561577-561726 + 72 6.40e-07 GACAACTGCA GGACTCGAACCTGCGCGGGCA AAGCCCAA chrXIII:259047-259390 + 1 6.40e-07 . GGACTCGAACCTGCGCGGGCA AAGCCCAAAA chrXII:948957-949327 - 44 6.77e-07 AGTCAGAGAA GGAATTGATCCAGGGTTTTTC CTTCAAATAC chrXVI:689410-689797 - 62 1.45e-06 GACACCAGCA GGATTTGAACCAGCGCGGGCA GAGCCCAACA chrXIV:726068-726315 + 4 2.62e-06 GCG AGGTTCGAACTCGCGCGGACA ACCGTCCAAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRRTCGAACCSVKGAYCTYM MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:631775-632035 1.5e-13 1_[+2]_78 chrIII:123461-123791 1.5e-13 11_[+2]_68 chrIV:667873-668112 4e-11 75_[+2]_4 chrV:551199-551481 4e-11 5_[+2]_74 chrV:443131-443386 4e-11 4_[+2]_75 chrXII:734656-734972 4e-11 79_[-2] chrXIV:569795-569995 4e-11 32_[+2]_47 chrIX:210673-210826 4e-11 7_[-2]_72 chrXII:214795-215085 3.1e-10 3_[+2]_76 chrV:311907-312247 3.1e-10 6_[+2]_73 chrXIV:96106-96455 7.9e-10 21_[+2]_58 chrXV:110875-111126 7.9e-10 22_[+2]_57 chrXII:448537-448874 9.1e-10 5_[+2]_74 chrVI:226601-226882 9.1e-10 7_[+2]_72 chrX:414817-414917 9.1e-10 77_[-2]_2 chrIV:1352381-1352666 9.1e-10 3_[+2]_76 chrVII:185592-185918 9.1e-10 19_[+2]_60 chrIV:802637-802871 9.1e-10 37_[+2]_42 chrV:135298-135610 9.1e-10 31_[+2]_48 chrV:435670-435946 9.1e-10 4_[+2]_75 chrIV:645106-645220 9.1e-10 50_[+2]_29 chrVII:122139-122462 9.1e-10 59_[-2]_20 chrVII:774177-774588 1.1e-09 57_[-2]_22 chrVIII:146141-146329 1.1e-09 67_[+2]_12 chrX:197201-197301 1.1e-09 [+2]_79 chrXVI:856894-857073 1.1e-09 9_[-2]_70 chrVII:405414-405642 1.4e-09 31_[-2]_48 chrVII:541691-542082 1.4e-09 53_[-2]_26 chrII:405707-406107 1.4e-09 60_[-2]_19 chrIII:82404-82604 1.4e-09 18_[+2]_61 chrXVI:210065-210426 1.4e-09 7_[+2]_72 chrX:374305-374405 1.4e-09 39_[+2]_40 chrV:176937-177352 1.4e-09 44_[-2]_35 chrVII:828519-828962 1.4e-09 43_[+2]_36 chrV:487241-487529 1.4e-09 6_[+2]_73 chrVII:328427-328832 1.4e-09 43_[-2]_36 chrV:138501-138918 1.4e-09 46_[-2]_33 chrXI:162331-162704 1.4e-09 30_[+2]_49 chrIV:568715-569131 1.4e-09 48_[-2]_31 chrX:355195-355295 1.4e-09 29_[-2]_50 chrX:531680-531780 1.9e-09 17_[-2]_62 chrV:61763-62106 1.9e-09 16_[+2]_63 chrXVI:572092-572479 1.9e-09 72_[-2]_7 chrVII:845476-845874 1.9e-09 62_[-2]_17 chrIV:992684-992999 1.9e-09 79_[-2] chrVIII:475616-475917 3.2e-09 [+2]_79 chrIV:1075362-1075692 3.2e-09 5_[+2]_74 chrIV:488580-489023 4.1e-09 56_[+2]_23 chrII:266221-266611 4.6e-09 52_[-2]_27 chrIX:174942-175146 4.6e-09 77_[-2]_2 chrXIV:104651-104981 4.6e-09 79_[-2] chrXIV:560602-560824 4.6e-09 40_[+2]_39 chrX:538438-538538 4.6e-09 64_[-2]_15 chrIV:434196-434441 4.6e-09 6_[+2]_73 chrVII:823337-823663 5.2e-09 73_[-2]_6 chrVII:412158-412527 5.2e-09 12_[+2]_67 chrXV:663683-664020 5.2e-09 21_[+2]_58 chrXIII:808138-808472 1.6e-08 1_[+2]_78 chrXI:578811-579225 2.4e-08 60_[-2]_19 chrXV:340190-340528 3e-08 [+2]_79 chrIV:619860-620181 3e-08 9_[+2]_70 chrXV:976355-976569 1.3e-07 49_[-2]_30 chrXIII:572736-573119 1.3e-07 16_[+2]_63 chrVIII:466902-467143 2e-07 57_[-2]_22 chrXI:313325-313593 2.2e-07 2_[+2]_77 chrVIII:62606-62926 2.2e-07 78_[-2]_1 chrVII:110430-110806 2.2e-07 67_[+2]_12 chrXIII:362935-363227 2.2e-07 72_[-2]_7 chrV:434474-434640 2.2e-07 44_[+2]_35 chrXIII:168706-169022 2.3e-07 37_[-2]_42 chrX:354128-354228 2.3e-07 51_[-2]_28 chrX:204573-204673 3.1e-07 57_[-2]_22 chrX:541397-541497 3.1e-07 67_[-2]_12 chrVII:544451-544805 3.1e-07 9_[+2]_70 chrXII:818488-818768 3.7e-07 70_[-2]_9 chrVI:137332-137693 4e-07 34_[+2]_45 chrXII:975868-976114 4e-07 52_[+2]_27 chrXIV:102554-102937 4e-07 62_[-2]_17 chrXVI:744127-744484 4.2e-07 68_[-2]_11 chrVII:1004085-1004378 4.2e-07 74_[-2]_5 chrVII:707018-707216 4.8e-07 51_[+2]_28 chrII:226944-227284 6.4e-07 60_[-2]_19 chrVII:561577-561726 6.4e-07 71_[+2]_8 chrXIII:259047-259390 6.4e-07 [+2]_79 chrXII:948957-949327 6.8e-07 43_[-2]_36 chrXVI:689410-689797 1.5e-06 61_[-2]_18 chrXIV:726068-726315 2.6e-06 3_[+2]_76 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRRTCGAACCSVKGAYCTYM MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGRRTCGAACCSVKGAYCTYM width=21 seqs=87 chrXIV:631775-632035 ( 2) GGACTCGAACCCGGGACCTCC 1 chrIII:123461-123791 ( 12) GGACTCGAACCCGGGACCTCC 1 chrIV:667873-668112 ( 76) GGGATCGAACCGCTGATCCCC 1 chrV:551199-551481 ( 6) GGGATCGAACCGCTGATCCCC 1 chrV:443131-443386 ( 5) GGGATCGAACCGCTGATCCCC 1 chrXII:734656-734972 ( 80) GGGATCGAACCGCTGATCCCC 1 chrXIV:569795-569995 ( 33) GGGATCGAACCGCTGATCCCC 1 chrIX:210673-210826 ( 8) GGGATCGAACCGCTGATCCCC 1 chrXII:214795-215085 ( 4) GGAATCGAACCGATGACCTCT 1 chrV:311907-312247 ( 7) GGAATCGAACCGATGACCTCT 1 chrXIV:96106-96455 ( 22) AGAATCGAACCCGTGTCCCCA 1 chrXV:110875-111126 ( 23) AGAATCGAACCCGTGTCCCCA 1 chrXII:448537-448874 ( 6) GGATTCGAACCGGGGTTGTCC 1 chrVI:226601-226882 ( 8) GGGCTCGAACCCCTAACCTTA 1 chrX:414817-414917 ( 78) GGGCTCGAACCCCTAACCTTA 1 chrIV:1352381-1352666 ( 4) GGGCTCGAACCCCTAACCTTA 1 chrVII:185592-185918 ( 20) GGGCTCGAACCCCTAACCTTA 1 chrIV:802637-802871 ( 38) GGATTCGAACCGGGGTTGTCC 1 chrV:135298-135610 ( 32) GGGCTCGAACCCCTAACCTTA 1 chrV:435670-435946 ( 5) GGGCTCGAACCCCTAACCTTA 1 chrIV:645106-645220 ( 51) GGATTCGAACCGGGGTTGTCC 1 chrVII:122139-122462 ( 60) GGGCTCGAACCCCTAACCTTA 1 chrVII:774177-774588 ( 58) GGAATCGAACCGGAGACCTCT 1 chrVIII:146141-146329 ( 68) GGAATCGAACCGGAGACCTCT 1 chrX:197201-197301 ( 1) GGAATCGAACCGGAGACCTCT 1 chrXVI:856894-857073 ( 10) GGAATCGAACCGGAGACCTCT 1 chrVII:405414-405642 ( 32) GGGGTCGAACCCATAATCTTC 1 chrVII:541691-542082 ( 54) GGAGTCGAACCCCGGTCTCCA 1 chrII:405707-406107 ( 61) GGGGTCGAACCCATAATCTTC 1 chrIII:82404-82604 ( 19) GGAGTCGAACCCCGGTCTCCA 1 chrXVI:210065-210426 ( 8) GGAGTCGAACCCCGGTCTCCA 1 chrX:374305-374405 ( 40) GGGGTCGAACCCATAATCTTC 1 chrV:176937-177352 ( 45) GGAGTCGAACCCCGGTCTCCA 1 chrVII:828519-828962 ( 44) GGGGTCGAACCCATAATCTTC 1 chrV:487241-487529 ( 7) GGAGTCGAACCCCGGTCTCCA 1 chrVII:328427-328832 ( 44) GGAGTCGAACCCCGGTCTCCA 1 chrV:138501-138918 ( 47) GGGGTCGAACCCATAATCTTC 1 chrXI:162331-162704 ( 31) GGGGTCGAACCCATAATCTTC 1 chrIV:568715-569131 ( 49) GGGGTCGAACCCATAATCTTC 1 chrX:355195-355295 ( 30) GGGGTCGAACCCATAATCTTC 1 chrX:531680-531780 ( 18) GGAATCGAACCGGGGGCCCAA 1 chrV:61763-62106 ( 17) GGAATCGAACCGGGGGCCCAA 1 chrXVI:572092-572479 ( 73) GGAATCGAACCGGGGGCCCAA 1 chrVII:845476-845874 ( 63) GGAATCGAACCGGGGGCCCAA 1 chrIV:992684-992999 ( 80) GGAATCGAACCGGGGGCCCAA 1 chrVIII:475616-475917 ( 1) AGGATCGAACTCGGGACCTTT 1 chrIV:1075362-1075692 ( 6) AGGATCGAACTCGGGACCTTT 1 chrIV:488580-489023 ( 57) AGGTTCGAACTCGGGATCTTC 1 chrII:266221-266611 ( 53) GGATTTGAACCGATGATCTCC 1 chrIX:174942-175146 ( 78) GGATTTGAACCGATGATCTCC 1 chrXIV:104651-104981 ( 80) GGATTTGAACCGATGATCTCC 1 chrXIV:560602-560824 ( 41) GGATTTGAACCGATGATCTCC 1 chrX:538438-538538 ( 65) GGACTCGAACCCGCAGTCTTC 1 chrIV:434196-434441 ( 7) GGATTTGAACCGATGATCTCC 1 chrVII:823337-823663 ( 74) AGGATCGAACTGGGGACGTTC 1 chrVII:412158-412527 ( 13) AGGATCGAACTGGGGACGTTC 1 chrXV:663683-664020 ( 22) AGGATCGAACTGGGGACGTTC 1 chrXIII:808138-808472 ( 2) GGATTCGAACTGGGGTTGTTC 1 chrXI:578811-579225 ( 61) GGGCTCGAACCCCTGACATTT 1 chrXV:340190-340528 ( 1) GGACTTGAACCTGGAATCTTC 1 chrIV:619860-620181 ( 10) GGACTTGAACCTGGAATCTTC 1 chrXV:976355-976569 ( 50) AGGTTCGAACTCTCGACCTTC 1 chrXIII:572736-573119 ( 17) AGGTTCGAACTCTCGACCTTC 1 chrVIII:466902-467143 ( 58) AGAATTGAACTAGCGACCTTT 1 chrXI:313325-313593 ( 3) AGAATCGAACCAGGGTTTCAT 1 chrVIII:62606-62926 ( 79) AGAATCGAACCAGGGTTTCAT 1 chrVII:110430-110806 ( 68) AGAATCGAACCAGGGTTTCAT 1 chrXIII:362935-363227 ( 73) AGAATCGAACCAGGGTTTCAT 1 chrV:434474-434640 ( 45) AGAATCGAACCAGGGTTTCAT 1 chrXIII:168706-169022 ( 38) CGAGTCGAACGCCCGATCTCA 1 chrX:354128-354228 ( 52) CGAGTCGAACGCCCGATCTCA 1 chrX:204573-204673 ( 58) GGAATTGAACCCCGATCTGGC 1 chrX:541397-541497 ( 68) GGAATTGAACCCCGATCTGGC 1 chrVII:544451-544805 ( 10) GGAATTGAACCCCGATCTGGC 1 chrXII:818488-818768 ( 71) GGACTCGAACCCGGATCACAG 1 chrVI:137332-137693 ( 35) AGGGTTGAACTCACGATCTTG 1 chrXII:975868-976114 ( 53) AGGGTTGAACTCACGATCTTG 1 chrXIV:102554-102937 ( 63) AGGGTTGAACTCACGATCTTG 1 chrXVI:744127-744484 ( 69) AGAATTGAACTAACGACCTTT 1 chrVII:1004085-1004378 ( 75) AGAATTGAACTAACGACCTTT 1 chrVII:707018-707216 ( 52) AGGATCGAACTAAGGACCAAC 1 chrII:226944-227284 ( 61) GGACTCGAACCTGCGCGGGCA 1 chrVII:561577-561726 ( 72) GGACTCGAACCTGCGCGGGCA 1 chrXIII:259047-259390 ( 1) GGACTCGAACCTGCGCGGGCA 1 chrXII:948957-949327 ( 44) GGAATTGATCCAGGGTTTTTC 1 chrXVI:689410-689797 ( 62) GGATTTGAACCAGCGCGGGCA 1 chrXIV:726068-726315 ( 4) AGGTTCGAACTCGCGCGGACA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRRTCGAACCSVKGAYCTYM MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 47273 bayes= 9.4265 E= 5.2e-262 -22 -306 189 -1309 -1309 -1309 238 -1309 96 -1309 107 -1309 46 3 19 -94 -1309 -1309 -1309 170 -1309 205 -1309 -57 -1309 -1309 238 -1309 170 -1309 -1309 -1309 168 -1309 -1309 -474 -1309 238 -1309 -1309 -1309 203 -306 -66 -128 133 80 -242 -35 58 122 -374 -274 -6 111 21 -28 -1309 196 -1309 101 -174 -148 -28 -1309 140 -174 50 -374 180 -48 -84 -374 58 -125 98 -116 115 -248 38 1 122 -206 -66 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRRTCGAACCSVKGAYCTYM MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 87 E= 5.2e-262 0.264368 0.022989 0.712644 0.000000 0.000000 0.000000 1.000000 0.000000 0.597701 0.000000 0.402299 0.000000 0.425287 0.195402 0.218391 0.160920 0.000000 0.000000 0.000000 1.000000 0.000000 0.793103 0.000000 0.206897 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.988506 0.000000 0.000000 0.011494 0.000000 1.000000 0.000000 0.000000 0.000000 0.781609 0.022989 0.195402 0.126437 0.482759 0.333333 0.057471 0.241379 0.287356 0.448276 0.022989 0.045977 0.183908 0.413793 0.356322 0.252874 0.000000 0.747126 0.000000 0.620690 0.057471 0.068966 0.252874 0.000000 0.505747 0.057471 0.436782 0.022989 0.666667 0.137931 0.172414 0.022989 0.287356 0.080460 0.609195 0.137931 0.425287 0.034483 0.402299 0.310345 0.448276 0.045977 0.195402 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRRTCGAACCSVKGAYCTYM MEME-2 regular expression -------------------------------------------------------------------------------- [GA]G[AG][AG]T[CT]GAACC[CG][GCA][GT][GA][AT][CT]C[TC][CT][CA] -------------------------------------------------------------------------------- Time 645.72 secs. ******************************************************************************** ******************************************************************************** MOTIF GSBSNHRTRGTBTARTGGTWA MEME-3 width = 21 sites = 85 llr = 1300 E-value = 3.4e-213 ******************************************************************************** -------------------------------------------------------------------------------- Motif GSBSNHRTRGTBTARTGGTWA MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::::324:5::::a4::::47 pos.-specific C :64523::::22:::21:31: probability G 7333215:5a:4::6:9a1:1 matrix T 3:32341a::83a::8::652 bits 2.4 * * 2.1 * * 1.9 * ** 1.7 * * * ** Relative 1.4 * * * ** ** Entropy 1.2 ** * ** *** ** (22.1 bits) 1.0 ** **** ****** 0.7 ** * **** ******* 0.5 **** *************** 0.2 **** *************** 0.0 --------------------- Multilevel GCCCATGTAGTGTAGTGGTTA consensus TGTGTCA G T A CAT sequence G GA C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBSNHRTRGTBTARTGGTWA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrVI:162076-162380 + 50 3.35e-10 AAGAAAACAA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrIV:83383-83705 + 54 3.35e-10 AGTTCACTTA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrV:61763-62106 - 56 3.35e-10 CAAATAGTAA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrXVI:860203-860568 + 44 3.35e-10 TAAATAACAA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrXVI:572092-572479 + 34 3.35e-10 ACAATACTTC GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrVII:845476-845874 + 24 3.35e-10 TAAATAACAA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrVII:930912-931168 - 13 3.35e-10 TAATCAGTAA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrXV:282001-282324 + 52 3.35e-10 ACATGAAAGC GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrX:396649-396749 - 24 3.35e-10 TCAAAAGTAA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrXV:226494-226852 - 38 3.35e-10 AAGAAATTCA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrIV:992684-992999 + 41 3.35e-10 ACAATTGTGA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrXII:448537-448874 - 46 9.87e-10 AAGAAGTTCC GGTCCTATAGTGTAGTGGTTA TCACTTTCGG chrXIII:808138-808472 - 42 9.87e-10 AGAAGAAAAA GGTCCTATAGTGTAGTGGTTA TCACTTTCGG chrIV:520811-521142 + 46 9.87e-10 TCCATTTTAG GGTCCTATAGTGTAGTGGTTA TCACTTTCGG chrIII:168200-168552 - 26 9.87e-10 AAGAAGTCCT GGTCCTATAGTGTAGTGGTTA TCACTTTCGG chrIV:802637-802871 - 78 9.87e-10 TC GGTCCTATAGTGTAGTGGTTA TCACTTTCGG chrXV:464352-464626 + 11 1.20e-09 AAGTTAACAA GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrXIII:195968-196317 - 58 1.20e-09 AAGTTCACAA GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrXIV:567994-568303 + 17 1.20e-09 TAAAATAATC GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrI:138995-139306 + 52 1.20e-09 CAATTAGTAC GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrXII:92477-92657 + 31 1.20e-09 AAGTTAATAA GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrVIII:388798-389163 - 45 1.20e-09 ACAGATACAT GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrXV:300927-301289 + 39 1.20e-09 AGAAAAGATC GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrII:405707-406107 + 21 3.52e-09 ACAAATAGTA GCTCGCGTGGCGTAATGGCAA CGCGTCTGAC chrX:374305-374405 - 80 3.52e-09 . GCTCGCGTGGCGTAATGGCAA CGCGTCTGAC chrXIII:131732-132057 - 32 3.52e-09 AAGAAATTTA GCTCGCGTGGCGTAATGGCAA CGCGTCTGAC chrV:138501-138918 + 7 3.52e-09 AATAAT GCTCGCGTGGCGTAATGGCAA CGCGTCTGAC chrXI:162331-162704 - 71 3.52e-09 CAAATATTA GCTCGCGTGGCGTAATGGCAA CGCGTCTGAC chrXIII:747800-748122 - 32 3.52e-09 CATATGACTA GCTCGCGTGGCGTAATGGCAA CGCGTCTGAC chrIV:568715-569131 + 9 3.52e-09 AAATAGTA GCTCGCGTGGCGTAATGGCAA CGCGTCTGAC chrXIV:96106-96455 - 62 4.86e-09 TCCAACACAT GGGCGGTTAGTGTAGTGGTTA TCATCCCACC chrXV:110875-111126 - 63 4.86e-09 CAATTAACCC GGGCGGTTAGTGTAGTGGTTA TCATCCCACC chrV:131014-131319 - 17 1.17e-08 ATAATTAAGA GGTTTTATAGTGTAGTGGTTA TCACTTTCGG chrII:350667-350964 + 62 1.17e-08 TCAATAAAAG GGTTTTATAGTGTAGTGGTTA TCACTTTCGG chrXV:594279-594583 - 24 1.96e-08 TGATTGAAAC GCGCAAGTGGTTCAGTGGTTA GAATTTATGC chrIX:197435-197750 + 50 2.81e-08 GCTAATCAAA TCCGATGTAGTGTAACGGCTA TCACATCACG chrIV:410212-410496 + 75 2.81e-08 TACAAATATT GGGCGTGTGGCGTAGTCGGTA GCGCG chrIV:1017103-1017451 - 31 2.81e-08 CAAGGTACAA TCCGATGTAGTGTAACGGCTA TCACATCACG chrVII:541691-542082 + 14 6.00e-08 CAGATTACCA TCCGATATAGTGTAACGGCTA TCACATCACG chrXII:797003-797338 + 58 6.00e-08 GTAGTTGTCG TCCGATATAGTGTAACGGCTA TCACATCACG chrIX:370246-370574 + 57 6.00e-08 TAGATTATAA TCCGATATAGTGTAACGGCTA TCACATCACG chrIII:82404-82604 - 59 6.00e-08 TAATTTGTTA TCCGATATAGTGTAACGGCTA TCACATCACG chrXIII:290643-290971 + 44 6.00e-08 TGAAATATAA TCCGATATAGTGTAACGGCTA TCACATCACG chrXVI:210065-210426 - 48 6.00e-08 CCAATTATTG TCCGATATAGTGTAACGGCTA TCACATCACG chrV:176937-177352 + 5 6.00e-08 TTGA TCCGATATAGTGTAACGGCTA TCACATCACG chrV:487241-487529 - 47 6.00e-08 ATGAATTTAA TCCGATATAGTGTAACGGCTA TCACATCACG chrVII:328427-328832 + 4 6.00e-08 TTG TCCGATATAGTGTAACGGCTA TCACATCACG chrXI:140919-141249 - 35 6.00e-08 TCCTTTGTAA TCCGATATAGTGTAACGGCTA TCACATCACG chrII:645008-645334 + 46 6.00e-08 TAAGTTATTA TCCGATATAGTGTAACGGCTA TCACATCACG chrX:115841-115941 - 30 6.00e-08 CCGTTTATAA TCCGATATAGTGTAACGGCTA TCACATCACG chrXIV:631775-632035 - 42 8.86e-08 AACTTCTACC GGGCGTGTGGTCTAGAGGTAT GATTCTCGCT chrIII:123461-123791 - 52 8.86e-08 TTTCAAAGGA GGGCGTGTGGTCTAGAGGTAT GATTCTCGCT chrXII:793745-794072 + 60 1.79e-07 TGTAATATAA TCCGTGATAGTTTAATGGTCA GAATGGGCGC chrX:204573-204673 + 18 1.79e-07 AACATAAAAA TCCGTGATAGTTTAATGGTCA GAATGGGCGC chrXII:426959-427297 + 54 1.79e-07 GTGTTTCTTA TCCGTGATAGTTTAATGGTCA GAATGGGCGC chrX:541397-541497 + 28 1.79e-07 AGAAAGAAAA TCCGTGATAGTTTAATGGTCA GAATGGGCGC chrXV:571800-572130 + 43 1.79e-07 ACAATTAAAA TCCGTGATAGTTTAATGGTCA GAATGGGCGC chrXI:513262-513542 - 31 1.79e-07 CAAATAACGT TCCGTGATAGTTTAATGGTCA GAATGGGCGC chrVII:544451-544805 - 50 1.79e-07 AGATATTTCT TCCGTGATAGTTTAATGGTCA GAATGGGCGC chrXIII:463418-463692 + 49 1.79e-07 CAGAAATTTG TCCGTGATAGTTTAATGGTCA GAATGGGCGC chrX:355195-355295 + 72 1.79e-07 CTTTGTTTCT TCCGTGATAGTTTAATGGTCA GAATGGGC chrVIII:475616-475917 - 42 2.28e-07 TTAAAAGTCT GTTCCAATAGTGTAGCGGCTA TCACGTTGCC chrIV:1075362-1075692 - 47 2.28e-07 CCGTAATATT GTTCCAATAGTGTAGCGGCTA TCACGTTGCC chrXI:308045-308384 - 33 2.86e-07 ACAATTAAGT GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrX:378191-378291 + 60 2.86e-07 TAAATTAATA GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrV:438553-438854 + 47 2.86e-07 CAACAAATTA GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrVII:823337-823663 + 32 2.86e-07 CAATAAGAGT GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrVII:412158-412527 - 55 2.86e-07 TCAAAAAACT GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrV:469293-469621 + 50 2.86e-07 AGAAATAATT GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrXIII:420509-420810 - 32 2.86e-07 ACAAATAACA GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrXV:663683-664020 - 64 2.86e-07 AACAAATAGT GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrXIII:372372-372649 - 38 2.86e-07 AATAAAACCT GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrVII:661577-661919 + 51 3.82e-07 GTAAAAATTT GCCTCCTTAGCTTAGTGGTAG AGCGTTGCAC chrXVI:744127-744484 + 29 3.82e-07 CAGTGTAAAA GCCTCCTTAGCTTAGTGGTAG AGCGTTGCAC chrVIII:466902-467143 + 18 3.82e-07 TGTATTTTTA GCCTCCTTAGCTTAGTGGTAG AGCGTTGCAC chrVII:1004085-1004378 + 35 3.82e-07 TCAAGGGTTT GCCTCCTTAGCTTAGTGGTAG AGCGTTGCAC chrXII:818488-818768 + 31 4.10e-07 AATTTATTAT GCTCCTCTAGTGCAATGGTTA GCATGCATTC chrXII:459499-460034 + 30 4.39e-07 GTAAGAGCCT GACCGAGTAGTGTAGTGGGTG ACCATACGCG chrXI:46674-46958 - 20 4.70e-07 AAATTACTCA GCCCTTTTGGCCAAGTGGTAA GGCATCGCAC chrXI:313325-313593 - 43 5.37e-07 ACAGTTGTTT GCCATCTTAGTATAGTGGTTA GTACACATCG chrVIII:62606-62926 + 39 5.37e-07 AAAATCATAT GCCATCTTAGTATAGTGGTTA GTACACATCG chrXIII:362935-363227 + 33 5.37e-07 ATCCAAGTTT GCCATCTTAGTATAGTGGTTA GTACACATCG chrX:538438-538538 + 25 6.92e-07 AACCAAGTTG GTTCCGTTGGCGTAATGGTAA CGCGTCTCCC chrXVI:297527-297897 + 66 8.79e-07 TTGCCCAACG TCGGCACTGGTCTAGTGGGTG CGCCAGCGTG chrII:326705-327035 - 25 1.04e-06 TCGAGTTCCG GGTCCAATGGTCCAGTGGTTC AAGACGTCGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBSNHRTRGTBTARTGGTWA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrVI:162076-162380 3.3e-10 49_[+3]_30 chrIV:83383-83705 3.3e-10 53_[+3]_26 chrV:61763-62106 3.3e-10 55_[-3]_24 chrXVI:860203-860568 3.3e-10 43_[+3]_36 chrXVI:572092-572479 3.3e-10 33_[+3]_46 chrVII:845476-845874 3.3e-10 23_[+3]_56 chrVII:930912-931168 3.3e-10 12_[-3]_67 chrXV:282001-282324 3.3e-10 51_[+3]_28 chrX:396649-396749 3.3e-10 23_[-3]_56 chrXV:226494-226852 3.3e-10 37_[-3]_42 chrIV:992684-992999 3.3e-10 40_[+3]_39 chrXII:448537-448874 9.9e-10 45_[-3]_34 chrXIII:808138-808472 9.9e-10 41_[-3]_38 chrIV:520811-521142 9.9e-10 45_[+3]_34 chrIII:168200-168552 9.9e-10 25_[-3]_54 chrIV:802637-802871 9.9e-10 77_[-3]_2 chrXV:464352-464626 1.2e-09 10_[+3]_69 chrXIII:195968-196317 1.2e-09 57_[-3]_22 chrXIV:567994-568303 1.2e-09 16_[+3]_63 chrI:138995-139306 1.2e-09 51_[+3]_28 chrXII:92477-92657 1.2e-09 30_[+3]_49 chrVIII:388798-389163 1.2e-09 44_[-3]_35 chrXV:300927-301289 1.2e-09 38_[+3]_41 chrII:405707-406107 3.5e-09 20_[+3]_59 chrX:374305-374405 3.5e-09 79_[-3] chrXIII:131732-132057 3.5e-09 31_[-3]_48 chrV:138501-138918 3.5e-09 6_[+3]_73 chrXI:162331-162704 3.5e-09 70_[-3]_9 chrXIII:747800-748122 3.5e-09 31_[-3]_48 chrIV:568715-569131 3.5e-09 8_[+3]_71 chrXIV:96106-96455 4.9e-09 61_[-3]_18 chrXV:110875-111126 4.9e-09 62_[-3]_17 chrV:131014-131319 1.2e-08 16_[-3]_63 chrII:350667-350964 1.2e-08 61_[+3]_18 chrXV:594279-594583 2e-08 23_[-3]_56 chrIX:197435-197750 2.8e-08 49_[+3]_30 chrIV:410212-410496 2.8e-08 74_[+3]_5 chrIV:1017103-1017451 2.8e-08 30_[-3]_49 chrVII:541691-542082 6e-08 13_[+3]_66 chrXII:797003-797338 6e-08 57_[+3]_22 chrIX:370246-370574 6e-08 56_[+3]_23 chrIII:82404-82604 6e-08 58_[-3]_21 chrXIII:290643-290971 6e-08 43_[+3]_36 chrXVI:210065-210426 6e-08 47_[-3]_32 chrV:176937-177352 6e-08 4_[+3]_75 chrV:487241-487529 6e-08 46_[-3]_33 chrVII:328427-328832 6e-08 3_[+3]_76 chrXI:140919-141249 6e-08 34_[-3]_45 chrII:645008-645334 6e-08 45_[+3]_34 chrX:115841-115941 6e-08 29_[-3]_50 chrXIV:631775-632035 8.9e-08 41_[-3]_38 chrIII:123461-123791 8.9e-08 51_[-3]_28 chrXII:793745-794072 1.8e-07 59_[+3]_20 chrX:204573-204673 1.8e-07 17_[+3]_62 chrXII:426959-427297 1.8e-07 53_[+3]_26 chrX:541397-541497 1.8e-07 27_[+3]_52 chrXV:571800-572130 1.8e-07 42_[+3]_37 chrXI:513262-513542 1.8e-07 30_[-3]_49 chrVII:544451-544805 1.8e-07 49_[-3]_30 chrXIII:463418-463692 1.8e-07 48_[+3]_31 chrX:355195-355295 1.8e-07 71_[+3]_8 chrVIII:475616-475917 2.3e-07 41_[-3]_38 chrIV:1075362-1075692 2.3e-07 46_[-3]_33 chrXI:308045-308384 2.9e-07 32_[-3]_47 chrX:378191-378291 2.9e-07 59_[+3]_20 chrV:438553-438854 2.9e-07 46_[+3]_33 chrVII:823337-823663 2.9e-07 31_[+3]_48 chrVII:412158-412527 2.9e-07 54_[-3]_25 chrV:469293-469621 2.9e-07 49_[+3]_30 chrXIII:420509-420810 2.9e-07 31_[-3]_48 chrXV:663683-664020 2.9e-07 63_[-3]_16 chrXIII:372372-372649 2.9e-07 37_[-3]_42 chrVII:661577-661919 3.8e-07 50_[+3]_29 chrXVI:744127-744484 3.8e-07 28_[+3]_51 chrVIII:466902-467143 3.8e-07 17_[+3]_62 chrVII:1004085-1004378 3.8e-07 34_[+3]_45 chrXII:818488-818768 4.1e-07 30_[+3]_49 chrXII:459499-460034 4.4e-07 29_[+3]_50 chrXI:46674-46958 4.7e-07 19_[-3]_60 chrXI:313325-313593 5.4e-07 42_[-3]_37 chrVIII:62606-62926 5.4e-07 38_[+3]_41 chrXIII:362935-363227 5.4e-07 32_[+3]_47 chrX:538438-538538 6.9e-07 24_[+3]_55 chrXVI:297527-297897 8.8e-07 65_[+3]_14 chrII:326705-327035 1e-06 24_[-3]_55 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBSNHRTRGTBTARTGGTWA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GSBSNHRTRGTBTARTGGTWA width=21 seqs=85 chrVI:162076-162380 ( 50) GCGCAAGTGGTTTAGTGGTAA 1 chrIV:83383-83705 ( 54) GCGCAAGTGGTTTAGTGGTAA 1 chrV:61763-62106 ( 56) GCGCAAGTGGTTTAGTGGTAA 1 chrXVI:860203-860568 ( 44) GCGCAAGTGGTTTAGTGGTAA 1 chrXVI:572092-572479 ( 34) GCGCAAGTGGTTTAGTGGTAA 1 chrVII:845476-845874 ( 24) GCGCAAGTGGTTTAGTGGTAA 1 chrVII:930912-931168 ( 13) GCGCAAGTGGTTTAGTGGTAA 1 chrXV:282001-282324 ( 52) GCGCAAGTGGTTTAGTGGTAA 1 chrX:396649-396749 ( 24) GCGCAAGTGGTTTAGTGGTAA 1 chrXV:226494-226852 ( 38) GCGCAAGTGGTTTAGTGGTAA 1 chrIV:992684-992999 ( 41) GCGCAAGTGGTTTAGTGGTAA 1 chrXII:448537-448874 ( 46) GGTCCTATAGTGTAGTGGTTA 1 chrXIII:808138-808472 ( 42) GGTCCTATAGTGTAGTGGTTA 1 chrIV:520811-521142 ( 46) GGTCCTATAGTGTAGTGGTTA 1 chrIII:168200-168552 ( 26) GGTCCTATAGTGTAGTGGTTA 1 chrIV:802637-802871 ( 78) GGTCCTATAGTGTAGTGGTTA 1 chrXV:464352-464626 ( 11) GGGCGTGTGGTCTAGTGGTAT 1 chrXIII:195968-196317 ( 58) GGGCGTGTGGTCTAGTGGTAT 1 chrXIV:567994-568303 ( 17) GGGCGTGTGGTCTAGTGGTAT 1 chrI:138995-139306 ( 52) GGGCGTGTGGTCTAGTGGTAT 1 chrXII:92477-92657 ( 31) GGGCGTGTGGTCTAGTGGTAT 1 chrVIII:388798-389163 ( 45) GGGCGTGTGGTCTAGTGGTAT 1 chrXV:300927-301289 ( 39) GGGCGTGTGGTCTAGTGGTAT 1 chrII:405707-406107 ( 21) GCTCGCGTGGCGTAATGGCAA 1 chrX:374305-374405 ( 80) GCTCGCGTGGCGTAATGGCAA 1 chrXIII:131732-132057 ( 32) GCTCGCGTGGCGTAATGGCAA 1 chrV:138501-138918 ( 7) GCTCGCGTGGCGTAATGGCAA 1 chrXI:162331-162704 ( 71) GCTCGCGTGGCGTAATGGCAA 1 chrXIII:747800-748122 ( 32) GCTCGCGTGGCGTAATGGCAA 1 chrIV:568715-569131 ( 9) GCTCGCGTGGCGTAATGGCAA 1 chrXIV:96106-96455 ( 62) GGGCGGTTAGTGTAGTGGTTA 1 chrXV:110875-111126 ( 63) GGGCGGTTAGTGTAGTGGTTA 1 chrV:131014-131319 ( 17) GGTTTTATAGTGTAGTGGTTA 1 chrII:350667-350964 ( 62) GGTTTTATAGTGTAGTGGTTA 1 chrXV:594279-594583 ( 24) GCGCAAGTGGTTCAGTGGTTA 1 chrIX:197435-197750 ( 50) TCCGATGTAGTGTAACGGCTA 1 chrIV:410212-410496 ( 75) GGGCGTGTGGCGTAGTCGGTA 1 chrIV:1017103-1017451 ( 31) TCCGATGTAGTGTAACGGCTA 1 chrVII:541691-542082 ( 14) TCCGATATAGTGTAACGGCTA 1 chrXII:797003-797338 ( 58) TCCGATATAGTGTAACGGCTA 1 chrIX:370246-370574 ( 57) TCCGATATAGTGTAACGGCTA 1 chrIII:82404-82604 ( 59) TCCGATATAGTGTAACGGCTA 1 chrXIII:290643-290971 ( 44) TCCGATATAGTGTAACGGCTA 1 chrXVI:210065-210426 ( 48) TCCGATATAGTGTAACGGCTA 1 chrV:176937-177352 ( 5) TCCGATATAGTGTAACGGCTA 1 chrV:487241-487529 ( 47) TCCGATATAGTGTAACGGCTA 1 chrVII:328427-328832 ( 4) TCCGATATAGTGTAACGGCTA 1 chrXI:140919-141249 ( 35) TCCGATATAGTGTAACGGCTA 1 chrII:645008-645334 ( 46) TCCGATATAGTGTAACGGCTA 1 chrX:115841-115941 ( 30) TCCGATATAGTGTAACGGCTA 1 chrXIV:631775-632035 ( 42) GGGCGTGTGGTCTAGAGGTAT 1 chrIII:123461-123791 ( 52) GGGCGTGTGGTCTAGAGGTAT 1 chrXII:793745-794072 ( 60) TCCGTGATAGTTTAATGGTCA 1 chrX:204573-204673 ( 18) TCCGTGATAGTTTAATGGTCA 1 chrXII:426959-427297 ( 54) TCCGTGATAGTTTAATGGTCA 1 chrX:541397-541497 ( 28) TCCGTGATAGTTTAATGGTCA 1 chrXV:571800-572130 ( 43) TCCGTGATAGTTTAATGGTCA 1 chrXI:513262-513542 ( 31) TCCGTGATAGTTTAATGGTCA 1 chrVII:544451-544805 ( 50) TCCGTGATAGTTTAATGGTCA 1 chrXIII:463418-463692 ( 49) TCCGTGATAGTTTAATGGTCA 1 chrX:355195-355295 ( 72) TCCGTGATAGTTTAATGGTCA 1 chrVIII:475616-475917 ( 42) GTTCCAATAGTGTAGCGGCTA 1 chrIV:1075362-1075692 ( 47) GTTCCAATAGTGTAGCGGCTA 1 chrXI:308045-308384 ( 33) GGTTTCGTGGTCTAGTCGGTT 1 chrX:378191-378291 ( 60) GGTTTCGTGGTCTAGTCGGTT 1 chrV:438553-438854 ( 47) GGTTTCGTGGTCTAGTCGGTT 1 chrVII:823337-823663 ( 32) GGTTTCGTGGTCTAGTCGGTT 1 chrVII:412158-412527 ( 55) GGTTTCGTGGTCTAGTCGGTT 1 chrV:469293-469621 ( 50) GGTTTCGTGGTCTAGTCGGTT 1 chrXIII:420509-420810 ( 32) GGTTTCGTGGTCTAGTCGGTT 1 chrXV:663683-664020 ( 64) GGTTTCGTGGTCTAGTCGGTT 1 chrXIII:372372-372649 ( 38) GGTTTCGTGGTCTAGTCGGTT 1 chrVII:661577-661919 ( 51) GCCTCCTTAGCTTAGTGGTAG 1 chrXVI:744127-744484 ( 29) GCCTCCTTAGCTTAGTGGTAG 1 chrVIII:466902-467143 ( 18) GCCTCCTTAGCTTAGTGGTAG 1 chrVII:1004085-1004378 ( 35) GCCTCCTTAGCTTAGTGGTAG 1 chrXII:818488-818768 ( 31) GCTCCTCTAGTGCAATGGTTA 1 chrXII:459499-460034 ( 30) GACCGAGTAGTGTAGTGGGTG 1 chrXI:46674-46958 ( 20) GCCCTTTTGGCCAAGTGGTAA 1 chrXI:313325-313593 ( 43) GCCATCTTAGTATAGTGGTTA 1 chrVIII:62606-62926 ( 39) GCCATCTTAGTATAGTGGTTA 1 chrXIII:362935-363227 ( 33) GCCATCTTAGTATAGTGGTTA 1 chrX:538438-538538 ( 25) GTTCCGTTGGCGTAATGGTAA 1 chrXVI:297527-297897 ( 66) TCGGCACTGGTCTAGTGGGTG 1 chrII:326705-327035 ( 25) GGTCCAATGGTCCAGTGGTTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBSNHRTRGTBTARTGGTWA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 47273 bayes= 10.1146 E= 3.4e-213 -1305 -1305 190 -13 -471 167 83 -312 -1305 97 62 10 -312 140 56 -80 -1 -12 29 -13 -62 50 -44 33 24 -303 133 -125 -1305 -1305 -1305 170 72 -1305 136 -1305 -1305 -1305 238 -1305 -1305 -22 -1305 144 -312 36 114 -7 -471 -244 -1305 163 170 -1305 -1305 -1305 29 -1305 170 -1305 -371 -3 -1305 136 -1305 -71 220 -1305 -1305 -1305 238 -1305 -1305 50 -44 93 33 -86 -1305 72 120 -403 -144 -54 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBSNHRTRGTBTARTGGTWA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 85 E= 3.4e-213 0.000000 0.000000 0.717647 0.282353 0.011765 0.611765 0.341176 0.035294 0.000000 0.376471 0.294118 0.329412 0.035294 0.505882 0.282353 0.176471 0.305882 0.176471 0.235294 0.282353 0.200000 0.270588 0.141176 0.388235 0.364706 0.023529 0.482353 0.129412 0.000000 0.000000 0.000000 1.000000 0.505882 0.000000 0.494118 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.164706 0.000000 0.835294 0.035294 0.247059 0.423529 0.294118 0.011765 0.035294 0.000000 0.952941 1.000000 0.000000 0.000000 0.000000 0.376471 0.000000 0.623529 0.000000 0.023529 0.188235 0.000000 0.788235 0.000000 0.117647 0.882353 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.270588 0.141176 0.588235 0.388235 0.105882 0.000000 0.505882 0.705882 0.011765 0.070588 0.211765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBSNHRTRGTBTARTGGTWA MEME-3 regular expression -------------------------------------------------------------------------------- [GT][CG][CTG][CG][ATG][TCA][GA]T[AG]GT[GTC]TA[GA]TGG[TC][TA][AT] -------------------------------------------------------------------------------- Time 939.82 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXI:618815-619192 1.61e-01 100 chrVII:122139-122462 4.47e-14 23_[+1(5.16e-09)]_16_[-2(9.10e-10)]_\ 20 chrXII:242457-242827 1.00e+00 100 chrXI:74460-74787 8.17e-07 55_[+1(3.26e-09)]_25 chrIV:836105-836279 8.33e-02 100 chrXII:796409-796848 7.17e-01 100 chrXII:897740-898018 9.97e-01 100 chrIV:1403112-1403482 9.98e-01 100 chrIII:162560-162930 7.72e-01 100 chrXII:592419-592736 9.44e-10 2_[+2(2.27e-05)]_44_[-1(9.92e-10)]_\ 13 chrVIII:237738-238095 1.75e-05 48_[-1(1.27e-08)]_32 chrX:355195-355295 4.50e-10 29_[-2(1.40e-09)]_21_[+3(1.79e-07)]_\ 8 chrIII:227776-228154 3.62e-09 31_[+1(8.54e-10)]_49 chrIV:221961-222300 3.63e-01 100 chrXII:198790-199160 1.26e-01 100 chrXIII:259047-259390 2.08e-12 [+2(6.40e-07)]_25_[-1(7.96e-11)]_34 chrVII:561577-561726 3.53e-04 71_[+2(6.40e-07)]_8 chrIV:992684-992999 2.39e-13 40_[+3(3.35e-10)]_18_[-2(1.86e-09)] chrVIII:451812-451923 4.69e-01 100 chrVI:221747-222059 7.18e-01 100 chrV:434474-434640 6.20e-04 44_[+2(2.17e-07)]_35 chrIV:1359402-1359796 4.91e-01 100 chrXII:781476-781834 9.69e-01 100 chrXVI:405309-405548 9.53e-01 100 chrXIII:163939-164309 9.55e-01 100 chrIV:568715-569131 1.86e-12 8_[+3(3.52e-09)]_19_[-2(1.40e-09)]_\ 31 chrIV:331083-331453 2.68e-01 100 chrXIV:89269-89370 7.12e-01 100 chrXIII:747800-748122 1.60e-06 31_[-3(3.52e-09)]_48 chrXII:647575-647945 1.23e-01 100 chrVII:482448-482560 1.27e-01 100 chrXV:978827-979115 4.61e-01 100 chrI:72067-72437 3.56e-01 100 chrIV:1300963-1301323 9.21e-01 100 chrXIII:379234-379568 4.97e-03 100 chrXI:558592-558962 7.09e-01 100 chrXV:226494-226852 2.06e-07 37_[-3(3.35e-10)]_42 chrVII:480062-480432 9.03e-01 100 chrX:396649-396749 2.06e-07 23_[-3(3.35e-10)]_56 chrVIII:35588-35958 1.17e-01 100 chrXVI:302711-302974 9.96e-01 100 chrV:270384-270611 1.00e+00 100 chrXIII:372372-372649 1.50e-05 37_[-3(2.86e-07)]_42 chrXIII:463418-463692 1.92e-04 48_[+3(1.79e-07)]_31 chrXVI:627372-627742 5.12e-02 100 chrIV:645106-645220 3.53e-06 50_[+2(9.10e-10)]_29 chrXII:499332-499702 9.13e-01 100 chrII:301138-301508 1.16e-01 100 chrXV:282001-282324 2.06e-07 51_[+3(3.35e-10)]_28 chrXIV:102554-102937 4.28e-10 25_[+1(3.26e-09)]_17_[-2(3.97e-07)]_\ 17 chrXII:108555-108925 7.17e-02 4_[+3(6.57e-05)]_75 chrXV:353933-354276 3.50e-07 34_[-1(1.52e-09)]_46 chrXIII:651427-651797 8.50e-01 100 chrIII:138505-138875 2.30e-01 100 chrXV:663683-664020 6.22e-11 21_[+2(5.22e-09)]_21_[-3(2.86e-07)]_\ 16 chrXVI:821748-822118 9.63e-01 100 chrIV:1417366-1417642 8.36e-01 100 chrIV:1305466-1305779 1.04e-08 62_[+1(7.96e-11)]_18 chrXIV:575414-575784 7.24e-01 100 chrIV:1095274-1095617 1.28e-05 41_[-1(8.70e-09)]_39 chrXIII:551376-551789 8.77e-01 100 chrXVI:194095-194465 8.20e-01 100 chrIX:210673-210826 1.44e-07 7_[-2(3.99e-11)]_72 chrIV:1461621-1461812 1.04e-01 59_[+2(6.04e-05)]_20 chrX:115841-115941 2.58e-04 29_[-3(6.00e-08)]_50 chrXVI:769095-769486 5.60e-07 37_[-1(2.89e-09)]_43 chrXI:162331-162704 1.86e-12 30_[+2(1.40e-09)]_19_[-3(3.52e-09)]_\ 9 chrXV:882831-883201 6.54e-01 100 chrXV:796953-797323 1.19e-01 100 chrVII:319304-319445 9.68e-01 100 chrXVI:856894-857073 7.22e-06 9_[-2(1.06e-09)]_70 chrXI:84045-84363 4.26e-07 58_[+1(2.26e-09)]_22 chrXV:780532-780799 4.05e-01 100 chrXVI:520160-520518 1.68e-01 100 chrV:102246-102616 6.29e-02 8_[+3(2.13e-05)]_71 chrIV:341287-341605 4.86e-01 100 chrXII:498532-498855 5.89e-01 100 chrIV:555870-556240 6.50e-01 100 chrIV:1017103-1017451 2.64e-05 30_[-3(2.81e-08)]_49 chrVII:882713-883083 3.28e-01 100 chrX:59034-59134 2.90e-07 23_[-1(1.52e-09)]_57 chrXII:875224-875570 5.60e-07 33_[+1(2.89e-09)]_47 chrX:73420-73520 6.09e-01 100 chrV:435670-435946 4.47e-14 4_[+2(9.10e-10)]_16_[-1(5.16e-09)]_\ 39 chrIV:579953-580323 2.22e-01 100 chrV:140478-140869 7.46e-01 100 chrXI:321391-321761 6.77e-01 100 chrIX:390164-390534 1.58e-01 100 chrXIII:504721-505084 2.54e-06 47_[+1(1.66e-08)]_33 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chrXVI:819353-819692 2.13e-08 61_[+1(6.51e-11)]_19 chrIV:1401256-1401600 9.94e-01 100 chrIV:1352381-1352666 4.47e-14 3_[+2(9.10e-10)]_16_[-1(5.16e-09)]_\ 40 chrXVI:227336-227706 3.84e-01 100 chrI:75051-75421 9.32e-03 100 chrX:233768-233868 3.42e-07 68_[+1(2.51e-08)]_12 chrVIII:296898-297198 7.29e-01 100 chrXV:900264-900634 4.84e-01 100 chrX:374305-374405 1.86e-12 39_[+2(1.40e-09)]_19_[-3(3.52e-09)] chrIII:151207-151518 4.78e-08 19_[-1(5.16e-09)]_61 chrXII:639217-639587 1.20e-01 100 chrXIII:650802-651172 7.56e-01 100 chrXII:459499-460034 7.28e-05 6_[+1(8.37e-05)]_3_[+3(4.39e-07)]_\ 50 chrV:305802-306211 9.70e-01 100 chrV:424703-425073 8.42e-01 100 chrIV:225343-225713 9.97e-01 100 chrVII:277066-277374 6.12e-01 100 chrX:690512-690612 2.91e-01 100 chrXII:1029274-1029644 8.97e-01 100 chrXII:426959-427297 3.84e-04 53_[+3(1.79e-07)]_26 chrXV:1028714-1029093 5.71e-01 100 chrVI:157859-158181 1.75e-05 12_[-1(1.27e-08)]_68 chrX:204573-204673 6.47e-08 17_[+3(1.79e-07)]_19_[-2(3.06e-07)]_\ 22 chrXII:930657-931027 6.59e-02 100 chrXIII:504721-505086 2.54e-06 46_[+1(1.66e-08)]_34 chrXVI:373598-373968 2.37e-01 100 chrVII:291605-291975 6.50e-01 100 chrVII:412158-412527 6.22e-11 12_[+2(5.22e-09)]_21_[-3(2.86e-07)]_\ 25 chrIII:177310-177680 7.53e-01 100 chrIV:884218-884587 3.78e-10 13_[+1(1.27e-08)]_67 chrV:53527-53906 8.58e-01 100 chrXII:806511-806881 5.14e-01 100 chrVIII:466902-467143 1.19e-08 17_[+3(3.82e-07)]_19_[-2(2.03e-07)]_\ 22 chrII:605754-606101 2.53e-01 100 chrVIII:475616-475917 3.25e-09 [+2(3.16e-09)]_20_[-3(2.28e-07)]_38 chrXV:80590-80960 5.39e-01 100 chrII:326705-327035 4.99e-05 24_[-3(1.04e-06)]_55 chrVII:422913-423295 2.54e-06 42_[+1(1.66e-08)]_38 chrIV:133120-133323 2.63e-01 100 chrVI:210519-210862 9.83e-03 42_[-1(2.14e-05)]_38 chrVII:110430-110806 1.23e-03 67_[+2(2.17e-07)]_12 chrVII:439356-439726 8.31e-01 100 chrXVI:731924-732296 3.89e-01 100 chrXVI:136258-136628 5.30e-02 62_[+3(6.57e-05)]_17 chrXI:578811-579225 8.34e-11 1_[+1(2.89e-09)]_39_[-2(2.43e-08)]_\ 19 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9.80e-01 100 chrV:434605-434975 3.20e-01 100 chrX:703270-703370 9.98e-01 100 chrXIV:631775-632035 1.20e-13 1_[+2(1.53e-13)]_19_[-3(8.86e-08)]_\ 38 chrXII:628217-628603 2.54e-06 27_[+1(1.66e-08)]_53 chrXV:1025770-1025992 8.20e-01 100 chrXV:977463-977833 9.93e-01 100 chrXV:620434-620804 4.29e-01 100 chrV:235666-236036 3.92e-01 100 chrXV:167990-168411 5.79e-01 100 chrXVI:297757-298127 5.41e-02 100 chrXII:799302-799672 9.10e-01 100 chrVII:255175-255545 6.51e-01 100 chrXIV:632471-632737 1.51e-07 49_[+1(3.26e-09)]_31 chrXVI:173472-173842 2.55e-01 100 chrX:542841-542941 9.83e-03 42_[-1(2.14e-05)]_38 chrIV:308017-308366 8.77e-01 100 chrIX:99662-99995 8.98e-01 100 chrXIV:96106-96455 1.96e-11 21_[+2(7.91e-10)]_19_[-3(4.86e-09)]_\ 18 chrXIV:280878-281248 4.49e-01 100 chrII:333085-333455 7.66e-01 100 chrX:378191-378291 1.03e-05 59_[+3(2.86e-07)]_20 chrXV:274505-274863 2.79e-07 43_[+1(4.63e-09)]_37 chrVIII:146141-146329 1.22e-06 67_[+2(1.06e-09)]_12 chrX:349010-349110 4.31e-01 100 chrII:332333-332727 9.74e-01 100 chrXII:201823-202193 9.85e-01 100 chrXIII:290643-290971 2.58e-04 43_[+3(6.00e-08)]_36 chrII:800247-800440 2.27e-01 100 chrII:414564-414934 9.82e-01 100 chrXII:713168-713549 9.90e-01 100 chrXII:199216-199586 7.60e-01 100 chrVII:648970-649329 7.52e-01 100 chrXVI:880193-880540 2.10e-08 28_[-1(6.51e-11)]_52 chrVII:774177-774588 3.51e-15 16_[+3(2.81e-08)]_20_[-2(1.06e-09)]_\ 22 chrXVI:911471-911576 6.21e-01 100 chrXVI:689410-689797 3.24e-11 16_[+1(8.54e-10)]_25_[-2(1.45e-06)]_\ 18 chrXVI:850347-850717 7.46e-01 100 chrII:83332-83702 2.96e-01 100 chrXII:92477-92657 1.39e-06 30_[+3(1.20e-09)]_49 chrIX:255259-255629 2.98e-02 100 chrX:75365-75465 8.61e-01 100 chrIII:82404-82604 3.17e-10 18_[+2(1.40e-09)]_19_[-3(6.00e-08)]_\ 21 chrXV:40243-40677 5.82e-01 100 chrXVI:214619-215265 8.97e-01 100 chrII:477074-477455 8.38e-01 100 chrI:138995-139306 1.39e-06 51_[+3(1.20e-09)]_28 chrXIII:510816-511186 6.38e-01 100 chrX:90085-90185 5.80e-01 100 chrII:226944-227284 2.08e-12 15_[+1(7.96e-11)]_25_[-2(6.40e-07)]_\ 19 chrXII:522193-522424 9.79e-01 100 chrIV:1150734-1151110 2.74e-07 44_[-1(4.63e-09)]_36 chrXV:506064-506434 4.25e-01 100 chrXII:734656-734972 4.35e-16 42_[+1(6.51e-11)]_17_[-2(3.99e-11)] chrXV:415310-415680 9.66e-01 100 chrXV:710047-710359 1.41e-02 100 chrIV:619860-620181 4.02e-12 9_[+2(2.96e-08)]_16_[-1(2.51e-08)]_\ 34 chrXI:163716-164086 2.03e-01 100 chrXIII:755710-756080 8.70e-01 100 chrXIV:726068-726315 2.51e-09 3_[+2(2.62e-06)]_27_[-1(2.26e-09)]_\ 29 chrVIII:555096-555466 1.00e-01 100 chrXVI:581905-582223 4.78e-08 52_[+1(5.16e-09)]_28 chrXIII:145911-146270 3.28e-01 100 chrXII:1018971-1019331 9.71e-01 100 chrII:405707-406107 1.86e-12 20_[+3(3.52e-09)]_19_[-2(1.40e-09)]_\ 19 chrVII:371299-371444 3.76e-01 100 chrIV:398000-398370 8.74e-01 100 chrI:71868-72238 1.69e-01 100 chrIX:370246-370574 3.17e-04 56_[+3(6.00e-08)]_23 chrXIII:170881-171251 4.68e-01 100 chrX:414817-414917 4.47e-14 41_[+1(5.16e-09)]_16_[-2(9.10e-10)]_\ 2 chrXVI:575129-575499 9.03e-01 100 chrIII:8821-9191 8.06e-01 100 chrVII:788323-788698 7.34e-01 100 chrX:424364-424464 4.26e-07 15_[-1(2.26e-09)]_65 chrIV:83383-83705 9.25e-08 53_[+3(3.35e-10)]_26 chrIII:168200-168552 6.41e-07 25_[-3(9.87e-10)]_54 chrXI:308045-308384 1.26e-05 32_[-3(2.86e-07)]_47 chrVII:883474-883844 1.35e-01 100 chrXII:374183-374536 1.29e-07 50_[+1(2.51e-08)]_30 chrVII:482165-482347 2.70e-01 100 chrVIII:126811-127181 9.87e-01 100 chrIV:396988-397200 2.94e-01 100 chrV:396232-396573 9.98e-01 100 chrII:604153-604454 6.84e-02 10_[-1(3.85e-05)]_70 chrII:350667-350964 1.41e-05 61_[+3(1.17e-08)]_18 chrXIV:567994-568303 1.39e-06 16_[+3(1.20e-09)]_63 chrII:89639-89950 6.02e-01 100 chrV:79050-79420 5.28e-01 100 chrVI:226601-226882 4.47e-14 7_[+2(9.10e-10)]_16_[-1(5.16e-09)]_\ 36 chrVI:64995-65323 5.27e-01 100 chrVII:603988-604358 8.28e-01 100 chrV:51882-52252 9.71e-01 100 chrII:167960-168180 8.34e-01 100 chrV:44566-44936 3.59e-01 100 chrXIII:195968-196317 1.39e-06 57_[-3(1.20e-09)]_22 chrXIII:216046-216416 9.30e-01 100 chrXVI:76376-76686 4.23e-01 100 chrXV:94487-94819 8.28e-01 100 chrXV:234277-234647 2.54e-02 8_[-2(7.32e-05)]_71 chrXIII:224087-224312 4.90e-01 100 chrXV:678855-679173 7.56e-01 100 chrXII:922122-922529 9.43e-02 10_[-1(4.62e-05)]_70 chrII:144962-145332 2.69e-02 100 chrIV:520811-521142 3.40e-07 45_[+3(9.87e-10)]_34 chrV:461643-461914 9.37e-01 100 chrIX:394833-395016 8.40e-01 100 chrXI:82275-82645 2.14e-01 100 chrVII:661577-661919 2.06e-05 50_[+3(3.82e-07)]_29 chrXV:253818-254082 2.36e-01 100 chrXIII:168706-169022 1.91e-03 37_[-2(2.33e-07)]_42 chrII:36243-36557 1.75e-05 52_[+1(1.27e-08)]_28 chrX:415858-415958 4.97e-03 100 chrX:607866-607966 5.53e-01 100 chrVI:162076-162380 1.38e-07 49_[+3(3.35e-10)]_30 chrIV:1402896-1403266 4.18e-01 100 chrII:234782-235152 6.74e-01 100 chrVIII:259838-260208 8.16e-01 100 chrXIV:495212-495527 7.84e-01 100 chrXIII:159354-159724 2.35e-01 100 chrXV:445615-445985 3.73e-01 100 chrIV:358107-358405 9.97e-01 100 chrXV:160365-160735 8.31e-01 100 chrXII:731978-732275 8.84e-08 18_[+1(9.92e-10)]_62 chrXII:712306-712676 8.40e-01 100 chrXIV:104651-104981 9.24e-13 43_[+1(1.52e-09)]_16_[-2(4.61e-09)] chrXII:95457-95827 5.45e-01 100 chrXII:1018210-1018580 2.00e-01 100 chrXII:282531-282818 9.87e-01 100 chrXV:340190-340528 4.02e-12 [+2(2.96e-08)]_16_[-1(2.51e-08)]_43 chrXV:253036-253406 3.31e-01 100 chrIX:151224-151594 8.43e-01 100 chrXVI:406216-406538 6.69e-01 100 chrXII:914698-915068 8.03e-01 100 chrXIV:499348-499561 5.19e-01 100 chrXII:962884-963219 4.26e-07 29_[-1(2.26e-09)]_51 chrVI:137332-137693 4.28e-10 34_[+2(3.97e-07)]_17_[-1(3.26e-09)]_\ 8 chrXVI:172955-173325 5.17e-01 100 chrXI:67778-68036 9.00e-01 100 chrXI:431379-431635 9.21e-01 100 chrXV:866584-866934 5.07e-01 100 chrV:139543-139913 7.53e-01 100 chrVII:205367-205715 2.54e-06 34_[+1(1.66e-08)]_46 chrX:160103-160196 5.04e-01 93 chrXII:799503-799873 8.99e-01 100 chrIV:217205-217501 5.66e-01 100 chrXIII:626034-626404 5.16e-02 45_[+3(6.14e-05)]_34 chrIII:308742-308970 1.53e-02 6_[+2(8.79e-05)]_73 chrV:443131-443386 4.35e-16 4_[+2(3.99e-11)]_17_[-1(6.51e-11)]_\ 38 chrIV:1237507-1237877 1.31e-01 100 chrII:592913-593271 3.08e-01 100 chrXV:968142-968386 1.45e-01 100 chrVII:876230-876573 4.78e-08 47_[+1(5.16e-09)]_33 chrXIII:298390-298829 7.24e-01 100 chrXII:797003-797338 2.48e-04 57_[+3(6.00e-08)]_22 chrX:291119-291219 7.15e-02 100 chrXII:818488-818768 2.86e-07 30_[+3(4.10e-07)]_19_[-2(3.72e-07)]_\ 9 chrXVI:810562-810807 1.82e-06 46_[+1(3.26e-09)]_34 chrX:139627-139727 7.17e-01 100 chrXIV:585964-586334 3.00e-01 100 chrXV:159798-159977 3.69e-02 100 chrXII:605207-605581 3.78e-10 63_[-1(1.27e-08)]_17 chrIV:488580-489023 3.22e-05 56_[+2(4.07e-09)]_23 chrVIII:62606-62926 1.99e-07 38_[+3(5.37e-07)]_19_[-2(2.17e-07)]_\ 1 chrII:681221-681392 8.59e-01 100 chrIX:183352-183677 2.13e-08 24_[-1(6.51e-11)]_56 chrIV:519634-519885 4.26e-07 38_[+1(2.26e-09)]_42 chrV:551199-551481 4.35e-16 5_[+2(3.99e-11)]_17_[-1(6.51e-11)]_\ 37 chrXIV:230239-230609 9.27e-01 100 chrX:417683-417783 9.39e-01 100 chrIV:667873-668112 7.50e-08 75_[+2(3.99e-11)]_4 chrX:617753-617853 1.18e-07 53_[+1(9.92e-10)]_27 chrII:60875-61227 8.59e-01 100 chrIV:229532-229759 2.68e-01 100 chrVII:541691-542082 3.17e-10 13_[+3(6.00e-08)]_19_[-2(1.40e-09)]_\ 26 chrXI:382219-382431 1.09e-01 100 chrIV:387822-388192 4.71e-01 100 chrXVI:560075-560454 1.75e-05 50_[-1(1.27e-08)]_30 chrXIII:480521-480848 4.78e-08 34_[-1(5.16e-09)]_46 chrXII:903341-903711 3.61e-01 100 chrVIII:116009-116353 2.14e-07 23_[-1(1.52e-09)]_57 chrVII:555336-555681 4.54e-01 100 chrXV:946905-947275 1.65e-01 100 chrXIII:732056-732382 8.27e-01 100 chrXIII:499576-499946 4.37e-01 100 chrVII:916186-916556 8.93e-01 100 chrXII:47636-48006 1.00e+00 100 chrXII:214795-215085 7.99e-15 3_[+2(3.07e-10)]_16_[-1(5.33e-10)]_\ 40 chrXI:551949-552319 3.72e-01 100 chrV:362896-363266 1.00e+00 100 chrXII:233254-233476 1.76e-02 17_[-1(1.85e-05)]_63 chrIII:292717-293087 9.79e-01 100 chrXI:517820-518133 4.16e-09 61_[+3(2.81e-08)]_18 chrIII:127554-127873 2.74e-06 57_[+1(3.26e-09)]_23 chrV:86422-86791 8.71e-09 52_[+1(7.96e-11)]_28 chrXII:460427-460831 4.13e-01 100 chrVII:115335-115700 5.60e-07 25_[+1(2.89e-09)]_55 chrII:165144-165398 1.92e-01 100 chrXVI:252382-252752 4.84e-01 100 chrVII:345915-346285 6.23e-01 100 chrXI:334288-334658 8.39e-01 100 chrX:391875-391975 4.08e-01 100 chrI:170188-170558 6.99e-01 100 chrVIII:132946-133280 1.06e-08 19_[-1(7.96e-11)]_61 chrVII:149126-149496 8.18e-01 100 chrXIII:754429-754745 9.36e-01 100 chrXVI:310371-310741 1.25e-01 100 chrVII:534811-535201 6.90e-02 26_[+1(3.45e-05)]_54 chrXI:490804-491112 1.81e-07 64_[+1(2.51e-08)]_16 chrX:157462-157562 7.91e-01 100 chrXV:594279-594583 5.56e-06 23_[-3(1.96e-08)]_56 chrV:362230-362471 9.77e-01 100 chrVII:856772-856962 3.65e-01 100 chrXIII:808138-808472 1.95e-11 1_[+2(1.61e-08)]_19_[-3(9.87e-10)]_\ 38 chrXV:779707-780185 9.53e-01 100 chrVII:405414-405642 2.38e-05 31_[-2(1.40e-09)]_48 chrXIV:415119-415489 7.95e-01 100 chrXV:1005066-1005436 2.10e-02 45_[-2(4.47e-05)]_34 chrIV:579083-579356 7.98e-01 100 chrII:626707-627077 2.24e-01 100 chrVII:738976-739283 1.91e-08 47_[+1(6.51e-11)]_33 chrIX:174942-175146 9.24e-13 41_[+1(1.52e-09)]_16_[-2(4.61e-09)]_\ 2 chrVII:726442-726761 9.57e-01 100 chrXI:313325-313593 1.99e-07 2_[+2(2.17e-07)]_19_[-3(5.37e-07)]_\ 37 chrV:405935-406305 1.17e-01 59_[-2(7.79e-05)]_20 chrX:531680-531780 1.35e-05 17_[-2(1.86e-09)]_62 chrXVI:281636-281898 8.31e-01 100 chrVII:346136-346506 6.90e-01 100 chrXVI:378688-378945 5.72e-01 100 chrII:478862-479232 9.72e-01 100 chrXII:940760-941226 5.14e-01 100 chrXV:730743-731113 9.34e-01 100 chrIII:107258-107628 8.92e-01 100 chrXII:838649-838757 3.13e-02 100 chrXV:464352-464626 1.39e-06 10_[+3(1.20e-09)]_69 chrV:117737-118223 7.79e-01 100 chrVIII:34756-35126 1.67e-01 100 chrXII:793745-794072 4.07e-04 59_[+3(1.79e-07)]_20 chrXII:924536-924906 3.60e-01 100 chrX:704205-704305 1.47e-01 100 chrII:266221-266611 9.24e-13 16_[+1(1.52e-09)]_16_[-2(4.61e-09)]_\ 27 chrVIII:147951-148321 8.60e-01 100 chrXIII:63752-64122 7.21e-01 100 chrVII:794268-794577 1.79e-08 49_[+1(5.33e-10)]_31 chrXII:448537-448874 1.31e-12 5_[+2(9.10e-10)]_19_[-3(9.87e-10)]_\ 34 chrV:131014-131319 1.64e-05 16_[-3(1.17e-08)]_63 chrXII:1028241-1028557 9.54e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************