Invoking:
  getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa 1> $metrics
Finished invoke:
  name: count_seqs  status: 0  time: 0.012058
Invoking:
  fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa 1> $metrics
Finished invoke:
  name: most_seqs  status: 0  time: 0.056292
Invoking:
  fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/seqs-centered
Finished invoke:
  name: center_seqs  status: 0  time: 0.06829
Invoking:
  fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1
Finished invoke:
  name: shuffle_seqs  status: 0  time: 0.012484
Invoking:
  fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background
Finished invoke:
  name: bg  status: 0  time: 0.009458
Invoking:
  meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background -dna -revcomp -nostatus
Finished invoke:
  name: meme  status: 0  time: 716.63214
Invoking:
  dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/seqs-shuffled
Finished invoke:
  name: dreme  status: 0  time: 61.941923
Invoking:
  centrimo -seqlen 360 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml
Finished invoke:
  name: centrimo  status: 0  time: 0.14668
Invoking:
  tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/motif_alignment.txt
Finished invoke:
  name: align  status: 0  time: 0.496817
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background -primary WTGGCCRAGTGGKTTARGSS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml
Finished invoke:
  name: spamo1  status: 0  time: 0.308083
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background -primary TCGAACCSVKGAYCTYHYGAT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml
Finished invoke:
  name: spamo2  status: 0  time: 0.27453
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background -primary CAYCCRTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml
Finished invoke:
  name: spamo3  status: 0  time: 0.179174
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background -primary CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml
Finished invoke:
  name: spamo4  status: 0  time: 0.196362
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background -primary TCHAGAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml
Finished invoke:
  name: spamo5  status: 0  time: 0.187229
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background -primary GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml
Finished invoke:
  name: spamo6  status: 0  time: 0.177238
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background -primary ATAGTKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml
Finished invoke:
  name: spamo7  status: 0  time: 0.191408
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background -primary ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml
Finished invoke:
  name: spamo8  status: 0  time: 0.198789
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background -primary CRCCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml
Finished invoke:
  name: spamo9  status: 0  time: 0.206422
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background -primary ACTGMGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml
Finished invoke:
  name: spamo10  status: 0  time: 0.171409
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background -primary GGYTATCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml
Finished invoke:
  name: spamo11  status: 0  time: 0.18287
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background -primary CACGGW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml
Finished invoke:
  name: spamo12  status: 0  time: 0.256968
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background -primary AARAAAAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml
Finished invoke:
  name: spamo13  status: 0  time: 0.18477
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background -primary CCAASAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml
Finished invoke:
  name: spamo14  status: 0  time: 0.175226
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background --motif WTGGCCRAGTGGKTTARGSS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa
Finished invoke:
  name: fimo1  status: 0  time: 0.164733
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background --motif TCGAACCSVKGAYCTYHYGAT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa
Finished invoke:
  name: fimo2  status: 0  time: 0.160996
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background --motif CAYCCRTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa
Finished invoke:
  name: fimo3  status: 0  time: 0.08846
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background --motif CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa
Finished invoke:
  name: fimo4  status: 0  time: 0.085857
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background --motif TCHAGAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa
Finished invoke:
  name: fimo5  status: 0  time: 0.086962
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background --motif GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa
Finished invoke:
  name: fimo6  status: 0  time: 0.08749
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background --motif ATAGTKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa
Finished invoke:
  name: fimo7  status: 0  time: 0.086256
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background --motif ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa
Finished invoke:
  name: fimo8  status: 0  time: 0.087248
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background --motif CRCCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa
Finished invoke:
  name: fimo9  status: 0  time: 0.086766
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background --motif ACTGMGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa
Finished invoke:
  name: fimo10  status: 0  time: 0.087426
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background --motif GGYTATCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa
Finished invoke:
  name: fimo11  status: 0  time: 0.088286
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background --motif CACGGW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa
Finished invoke:
  name: fimo12  status: 0  time: 0.073611
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background --motif AARAAAAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa
Finished invoke:
  name: fimo13  status: 0  time: 0.089545
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background --motif CCAASAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/YJM789--HSF1.fa
Finished invoke:
  name: fimo14  status: 0  time: 0.089879
Writing output
Invoking:
  meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/summary.tsv
Finished invoke:
  name: summary  status: 0  time: 0.160199
Done