******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrVII:914756-915304 1.0000 100 chrI:141472-142056 1.0000 100 chrXII:459523-460146 1.0000 100 chrXIV:619650-620150 1.0000 100 chrII:477076-477664 1.0000 100 chrXV:877608-878157 1.0000 100 chrXII:460432-460759 1.0000 100 chrIX:316154-316590 1.0000 100 chrXV:216265-216667 1.0000 100 chrXII:97416-97934 1.0000 100 chrXVI:74900-75394 1.0000 100 chrXII:796426-796832 1.0000 100 chrII:444601-445110 1.0000 100 chrXV:168004-168389 1.0000 100 chrV:305808-306206 1.0000 100 chrIII:163488-163865 1.0000 100 chrV:140490-140872 1.0000 100 chrVII:771822-772388 1.0000 100 chrXII:922117-922530 1.0000 100 chrXVI:699980-700368 1.0000 100 chrVII:149115-149481 1.0000 100 chrII:332349-332722 1.0000 100 chrXII:713173-713535 1.0000 100 chrXII:65365-65816 1.0000 100 chrXIII:551387-551780 1.0000 100 chrIV:974261-974725 1.0000 100 chrXIII:631867-632506 1.0000 100 chrXV:380589-381096 1.0000 100 chrVIII:382933-383314 1.0000 100 chrVIII:125946-126299 1.0000 100 chrXII:781481-781824 1.0000 100 chrXIV:507187-507641 1.0000 100 chrXVI:731936-732286 1.0000 100 chrIV:1359423-1359785 1.0000 100 chrIV:117200-117555 1.0000 100 chrIV:465173-465609 1.0000 100 chrVIII:74990-75348 1.0000 100 chrV:364136-364557 1.0000 100 chrXI:618827-619181 1.0000 100 chrVII:534823-535199 1.0000 100 chrIV:416842-417229 1.0000 100 chrXII:88113-88519 1.0000 100 chrXV:866584-866939 1.0000 100 chrXV:1028733-1029069 1.0000 100 chrIV:130610-130942 1.0000 100 chrII:592921-593251 1.0000 100 chrVII:788339-788708 1.0000 100 chrIV:411289-411624 1.0000 100 chrVII:310535-310884 1.0000 100 chrX:90087-90435 1.0000 100 chrX:521657-522065 1.0000 100 chrXVI:842847-843257 1.0000 100 chrX:703271-703608 1.0000 100 chrXVI:352232-352622 1.0000 100 chrXV:79776-80115 1.0000 100 chrXIV:63140-63493 1.0000 100 chrXII:673864-674210 1.0000 100 chrIV:892375-892732 1.0000 100 chrXIII:225384-225718 1.0000 100 chrV:53543-53886 1.0000 100 chrIV:1300969-1301320 1.0000 100 chrXII:665023-665414 1.0000 100 chrXV:505148-505487 1.0000 100 chrV:85129-85571 1.0000 100 chrVIII:505840-506174 1.0000 100 chrIV:806159-806585 1.0000 100 chrII:415522-415852 1.0000 100 chrXII:241657-241998 1.0000 100 chrIV:1401265-1401592 1.0000 100 chrIII:137222-137549 1.0000 100 chrV:423125-423444 1.0000 100 chrVII:648979-649310 1.0000 100 chrX:75385-75715 1.0000 100 chrVII:254178-254527 1.0000 100 chrV:396230-396558 1.0000 100 chrXIV:495202-495517 1.0000 100 chrXVI:520198-520522 1.0000 100 chrIV:765238-765595 1.0000 100 chrVI:95501-95832 1.0000 100 chrIX:99664-99984 1.0000 100 chrII:605756-606104 1.0000 100 chrX:73430-73764 1.0000 100 chrIV:221980-222295 1.0000 100 chrXVI:76354-76687 1.0000 100 chrII:45026-45344 1.0000 100 chrXVI:406215-406542 1.0000 100 chrXIII:732063-732376 1.0000 100 chrIX:248648-249047 1.0000 100 chrIV:341291-341597 1.0000 100 chrVII:774177-774570 1.0000 100 chrVII:277065-277365 1.0000 100 chrII:89648-89948 1.0000 100 chrXI:158255-158580 1.0000 100 chrXV:92961-93286 1.0000 100 chrXVI:98659-99111 1.0000 100 chrVI:65014-65312 1.0000 100 chrV:311885-312252 1.0000 100 chrI:138979-139360 1.0000 100 chrVII:883792-884246 1.0000 100 chrXV:779727-780059 1.0000 100 chrXIV:96127-96458 1.0000 100 chrXV:678845-679164 1.0000 100 chrVII:661594-661924 1.0000 100 chrXII:366087-366418 1.0000 100 chrIII:227789-228156 1.0000 100 chrXIII:145928-146254 1.0000 100 chrIV:308030-308365 1.0000 100 chrXVI:769106-769483 1.0000 100 chrX:415847-416208 1.0000 100 chrVIII:388789-389155 1.0000 100 chrX:617752-618082 1.0000 100 chrIV:1175673-1176010 1.0000 100 chrXII:932117-932463 1.0000 100 chrXIII:379233-379568 1.0000 100 chrXIII:808140-808468 1.0000 100 chrV:138501-138895 1.0000 100 chrVII:809616-809949 1.0000 100 chrX:424348-424685 1.0000 100 chrII:197336-197635 1.0000 100 chrVI:106209-106545 1.0000 100 chrXVI:622448-622803 1.0000 100 chrII:604152-604448 1.0000 100 chrXV:274500-274879 1.0000 100 chrVII:287249-287614 1.0000 100 chrXI:302752-303129 1.0000 100 chrX:390942-391285 1.0000 100 chrII:60877-61213 1.0000 100 chrX:157455-157789 1.0000 100 chrVIII:103918-104220 1.0000 100 chrXVI:860210-860551 1.0000 100 chrXV:353937-354278 1.0000 100 chrXIII:259052-259388 1.0000 100 chrXIV:480913-481290 1.0000 100 chrVIII:116008-116342 1.0000 100 chrXII:731983-732281 1.0000 100 chrXIII:362928-363227 1.0000 100 chrVII:555357-555668 1.0000 100 chrVII:730982-731329 1.0000 100 chrX:542822-543204 1.0000 100 chrVII:438584-438889 1.0000 100 chrXIV:241417-241722 1.0000 100 chrX:523904-524256 1.0000 100 chrIX:257371-257678 1.0000 100 chrVIII:296900-297193 1.0000 100 chrV:99968-100299 1.0000 100 chrXVI:744132-744458 1.0000 100 chrXII:167853-168183 1.0000 100 chrVII:823349-823668 1.0000 100 chrVII:726449-726746 1.0000 100 chrII:36249-36560 1.0000 100 chrIV:1017077-1017447 1.0000 100 chrX:422782-423099 1.0000 100 chrV:431075-431512 1.0000 100 chrV:86407-86779 1.0000 100 chrXII:448505-448868 1.0000 100 chrXV:340082-340519 1.0000 100 chrIX:254255-254533 1.0000 100 chrIX:325602-325916 1.0000 100 chrXV:226524-226853 1.0000 100 chrVI:221755-222058 1.0000 100 chrIV:1075366-1075708 1.0000 100 chrVI:210514-210871 1.0000 100 chrXIII:572749-573113 1.0000 100 chrII:405719-406149 1.0000 100 chrXII:797010-797349 1.0000 100 chrVII:878601-878972 1.0000 100 chrX:414816-415154 1.0000 100 chrXI:308042-308378 1.0000 100 chrXIII:131725-132051 1.0000 100 chrI:166143-166471 1.0000 100 chrXVI:435786-436129 1.0000 100 chrXVI:689420-689786 1.0000 100 chrXV:228170-228493 1.0000 100 chrIII:123446-123793 1.0000 100 chrVII:412166-412523 1.0000 100 chrXII:1028254-1028557 1.0000 100 chrIII:168205-168550 1.0000 100 chrXVI:210095-210424 1.0000 100 chrIII:127564-127880 1.0000 100 chrIV:437617-437975 1.0000 100 chrVII:736166-736503 1.0000 100 chrX:355203-355655 1.0000 100 chrXIII:837763-838099 1.0000 100 chrVII:205363-205725 1.0000 100 chrXII:1018989-1019333 1.0000 100 chrVII:779452-779761 1.0000 100 chrVII:828529-828958 1.0000 100 chrXV:170498-170805 1.0000 100 chrXII:374187-374531 1.0000 100 chrVI:162070-162385 1.0000 100 chrVII:1004085-1004394 1.0000 100 chrV:288337-288677 1.0000 100 chrX:233773-234084 1.0000 100 chrXIII:754426-754733 1.0000 100 chrII:266220-266592 1.0000 100 chrVI:157859-158170 1.0000 100 chrIX:68237-68525 1.0000 100 chrVIII:62620-62923 1.0000 100 chrX:538435-538713 1.0000 100 chrV:176952-177291 1.0000 100 chrIX:300137-300462 1.0000 100 chrIV:83387-83701 1.0000 100 chrXV:370825-371143 1.0000 100 chrIV:769071-769406 1.0000 100 chrVII:738975-739302 1.0000 100 chrXIV:104667-105031 1.0000 100 chrV:61767-62093 1.0000 100 chrVII:422921-423297 1.0000 100 chrX:380921-381311 1.0000 100 chrVII:115345-115690 1.0000 100 chrXI:379530-379829 1.0000 100 chrII:645017-645334 1.0000 100 chrIII:142614-142929 1.0000 100 chrVII:845491-845823 1.0000 100 chrII:326694-327031 1.0000 100 chrVIII:134161-134499 1.0000 100 chrVI:137355-137699 1.0000 100 chrXII:784198-784565 1.0000 100 chrVIII:132958-133276 1.0000 100 chrXI:578805-579223 1.0000 100 chrVI:180864-181200 1.0000 100 chrV:441839-442588 1.0000 100 chrX:59024-59316 1.0000 100 chrX:651307-651576 1.0000 100 chrXIV:108105-108472 1.0000 100 chrXVI:560082-560440 1.0000 100 chrX:197219-197534 1.0000 100 chrXIV:567993-568331 1.0000 100 chrVII:328453-328837 1.0000 100 chrXII:875229-875576 1.0000 100 chrVII:544468-544814 1.0000 100 chrXV:300928-301308 1.0000 100 chrVII:440625-440964 1.0000 100 chrXVI:819369-819690 1.0000 100 chrIV:520810-521147 1.0000 100 chrV:469306-469615 1.0000 100 chrXII:605187-605577 1.0000 100 chrXII:592435-592739 1.0000 100 chrIV:992678-993007 1.0000 100 chrIX:324217-324532 1.0000 100 chrXIII:296811-297093 1.0000 100 chrIV:359423-359756 1.0000 100 chrXI:490805-491139 1.0000 100 chrX:378199-378525 1.0000 100 chrXII:897727-898015 1.0000 100 chrVII:541703-542075 1.0000 100 chrVII:110438-110800 1.0000 100 chrXV:288044-288376 1.0000 100 chrVIII:237742-238081 1.0000 100 chrXI:108771-109070 1.0000 100 chrIV:1150718-1151090 1.0000 100 chrVI:167305-167619 1.0000 100 chrXII:962900-963213 1.0000 100 chrXII:214794-215090 1.0000 100 chrX:115841-116179 1.0000 100 chrIII:90757-91078 1.0000 100 chrXIII:352123-352421 1.0000 100 chrIII:149768-150090 1.0000 100 chrIV:1095266-1095618 1.0000 100 chrIV:488582-489007 1.0000 100 chrXIII:290662-290958 1.0000 100 chrXVI:338763-339079 1.0000 100 chrXI:162366-162703 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chrXVI:880206-880532 1.0000 100 chrXV:282010-282320 1.0000 100 chrIV:1201613-1201912 1.0000 100 chrIX:336258-336572 1.0000 100 chrX:396646-396955 1.0000 100 chrVII:700507-701186 1.0000 100 chrXVI:572113-572481 1.0000 100 chrX:204584-204928 1.0000 100 chrXV:571796-572124 1.0000 100 chrXIII:321048-321354 1.0000 100 chrVII:857278-857646 1.0000 100 chrXIV:444477-444755 1.0000 100 chrXVI:56035-56372 1.0000 100 chrV:117638-118231 1.0000 100 chrXI:46680-46952 1.0000 100 chrVII:531470-531770 1.0000 100 chrIV:519626-519905 1.0000 100 chrXIII:747800-748122 1.0000 100 chrXV:594269-594568 1.0000 100 chrXIV:374739-374998 1.0000 100 chrVI:226583-226872 1.0000 100 chrV:354777-355076 1.0000 100 chrV:131011-131314 1.0000 100 chrXII:656847-657137 1.0000 100 chrXI:74476-74790 1.0000 100 chrX:354136-354436 1.0000 100 chrXV:113653-113934 1.0000 100 chrVII:366106-366412 1.0000 100 chrXVI:645242-645574 1.0000 100 chrXV:710053-710338 1.0000 100 chrII:350692-350966 1.0000 100 chrIV:568742-569146 1.0000 100 chrIX:183325-183663 1.0000 100 chrIV:434156-434446 1.0000 100 chrII:165128-165410 1.0000 100 chrIV:358126-358388 1.0000 100 chrI:81971-82237 1.0000 100 chrV:438569-438854 1.0000 100 chrXI:84058-84367 1.0000 100 chrVIII:175091-175358 1.0000 100 chrXVI:188649-188901 1.0000 100 chrII:381001-381325 1.0000 100 chrXII:818488-818773 1.0000 100 chrIII:178356-178615 1.0000 100 chrV:435660-435947 1.0000 100 chrVIII:148957-149223 1.0000 100 chrV:551201-551479 1.0000 100 chrXV:978505-978808 1.0000 100 chrXVI:810548-810816 1.0000 100 chrIII:295338-295682 1.0000 100 chrX:531705-532005 1.0000 100 chrXV:978792-979115 1.0000 100 chrXVI:378682-378931 1.0000 100 chrXV:976348-976593 1.0000 100 chrX:517724-518035 1.0000 100 chrXIII:168703-168997 1.0000 100 chrXIV:631763-632042 1.0000 100 chrVII:405411-405668 1.0000 100 chrXV:980574-980872 1.0000 100 chrXI:513263-513524 1.0000 100 chrX:541403-541672 1.0000 100 chrIX:370260-370568 1.0000 100 chrXV:161144-161381 1.0000 100 chrXIII:504727-505107 1.0000 100 chrXIII:463420-463696 1.0000 100 chrXI:458447-458758 1.0000 100 chrVIII:466894-467122 1.0000 100 chrV:362233-362474 1.0000 100 chrV:443134-443380 1.0000 100 chrII:9458-9741 1.0000 100 chrVII:185597-185919 1.0000 100 chrIV:410232-410516 1.0000 100 chrXVI:302719-302966 1.0000 100 chrXIV:726059-726312 1.0000 100 chrVII:483442-483667 1.0000 100 chrIV:217214-217481 1.0000 100 chrXV:110861-111127 1.0000 100 chrXIV:560593-560831 1.0000 100 chrV:225453-225718 1.0000 100 chrV:487245-487520 1.0000 100 chrIV:802634-802873 1.0000 100 chrXI:67785-68058 1.0000 100 chrVII:930915-931170 1.0000 100 chrIV:579100-579348 1.0000 100 chrVII:785507-785784 1.0000 100 chrXIII:91823-92093 1.0000 100 chrXV:968144-968394 1.0000 100 chrV:69062-69336 1.0000 100 chrXI:382172-382427 1.0000 100 chrXV:464355-464635 1.0000 100 chrVIII:271861-272152 1.0000 100 chrXII:370540-370883 1.0000 100 chrXIV:547053-547323 1.0000 100 chrIV:1352395-1352661 1.0000 100 chrXVI:794550-794792 1.0000 100 chrIV:884228-884582 1.0000 100 chrIV:1450948-1451172 1.0000 100 chrX:607868-608119 1.0000 100 chrVII:319737-319978 1.0000 100 chrXV:265127-265363 1.0000 100 chrXI:431399-431629 1.0000 100 chrXII:975837-976108 1.0000 100 chrXIV:602240-602482 1.0000 100 chrIV:1355757-1355972 1.0000 100 chrIII:78401-78647 1.0000 100 chrXIII:298598-298817 1.0000 100 chrIV:491030-491253 1.0000 100 chrXV:253825-254094 1.0000 100 chrVI:223941-224161 1.0000 100 chrVII:856752-856949 1.0000 100 chrIV:1461590-1461851 1.0000 100 chrXII:424209-424424 1.0000 100 chrVII:706994-707216 1.0000 100 chrIII:38934-39151 1.0000 100 chrII:181391-181596 1.0000 100 chrIV:946274-946569 1.0000 100 chrXII:369689-370031 1.0000 100 chrXIV:569782-569978 1.0000 100 chrXII:368418-368617 1.0000 100 chrXI:518944-519136 1.0000 100 chrVI:54965-55196 1.0000 100 chrIX:174945-175159 1.0000 100 chrXVI:856877-857100 1.0000 100 chrXVI:281673-281868 1.0000 100 chrX:391876-392093 1.0000 100 chrXIV:500490-500683 1.0000 100 chrXV:1025781-1025955 1.0000 100 chrVII:894440-894617 1.0000 100 chrVII:371280-371473 1.0000 100 chrXIV:330872-331073 1.0000 100 chrIV:229549-229736 1.0000 100 chrV:222372-222571 1.0000 100 chrXV:619224-619378 1.0000 100 chrIV:667901-668100 1.0000 100 chrXII:92476-92718 1.0000 100 chrIV:836104-836268 1.0000 100 chrXII:282532-282813 1.0000 100 chrXII:522208-522406 1.0000 100 chrXI:258755-258947 1.0000 100 chrV:492243-492441 1.0000 100 chrIV:1013744-1013941 1.0000 100 chrII:167973-168184 1.0000 100 chrXII:822737-822884 1.0000 100 chrVII:882853-883033 1.0000 100 chrVIII:146143-146329 1.0000 100 chrIX:386711-386875 1.0000 100 chrVII:397982-398163 1.0000 100 chrXV:159711-160071 1.0000 100 chrVI:101363-101564 1.0000 100 chrX:652285-652388 1.0000 100 chrV:270410-270570 1.0000 100 chrIV:1080560-1080739 1.0000 100 chrVIII:35616-35760 1.0000 100 chrII:407234-407420 1.0000 100 chrXIV:763103-763277 1.0000 100 chrXIII:224118-224271 1.0000 100 chrI:142594-143062 1.0000 100 chrXI:99762-99929 1.0000 100 chrXIII:13218-13578 1.0000 100 chrVIII:450999-451240 1.0000 100 chrXII:233404-234036 1.0000 100 chrV:434469-434632 1.0000 100 chrV:85900-86043 1.0000 100 chrVIII:98199-98349 1.0000 100 chrXIII:768279-768458 1.0000 100 chrXV:797065-797213 1.0000 100 chrXII:283261-283391 1.0000 100 chrVIII:34609-34969 1.0000 100 chrXIV:89160-89520 1.0000 100 chrIX:427036-427169 1.0000 100 chrIV:645077-645249 1.0000 100 chrXI:259377-259469 1.0000 92 chrXV:825050-825141 1.0000 91 chrXV:780519-780662 1.0000 100 chrXIII:759455-759580 1.0000 100 chrIV:580074-580199 1.0000 100 chrXIII:302836-303196 1.0000 100 chrIV:915519-915879 1.0000 100 chrIV:386494-386854 1.0000 100 chrVII:561463-561823 1.0000 100 chrXII:201930-202290 1.0000 100 chrVII:920039-920184 1.0000 100 chrXI:334410-334770 1.0000 100 chrX:195597-195957 1.0000 100 chrXIV:577133-577493 1.0000 100 chrIV:1165045-1165405 1.0000 100 chrX:349014-349374 1.0000 100 chrI:71980-72155 1.0000 100 chrIX:255260-255620 1.0000 100 chrX:160097-160196 1.0000 99 chrXIV:586047-586407 1.0000 100 chrXVI:303527-303693 1.0000 100 chrXII:806224-806319 1.0000 95 chrXI:327057-327417 1.0000 100 chrVIII:34825-35185 1.0000 100 chrXII:263563-263923 1.0000 100 chrXIV:499388-499551 1.0000 100 chrXII:232445-232696 1.0000 100 chrIV:1489500-1489860 1.0000 100 chrX:545414-545774 1.0000 100 chrX:140181-140307 1.0000 100 chrVII:557677-558037 1.0000 100 chrXVI:405330-405690 1.0000 100 chrXII:198925-199285 1.0000 100 chrIV:45493-45853 1.0000 100 chrVII:439363-439723 1.0000 100 chrXVI:821763-822123 1.0000 100 chrVII:609666-610026 1.0000 100 chrXII:806285-806645 1.0000 100 chrX:122267-122627 1.0000 100 chrIII:82428-82593 1.0000 100 chrX:139434-139794 1.0000 100 chrXII:712376-712736 1.0000 100 chrXI:552069-552429 1.0000 100 chrXVI:193939-194299 1.0000 100 chrXIII:220235-220595 1.0000 100 chrIII:230406-230766 1.0000 100 chrXV:911775-912135 1.0000 100 chrXI:141726-142086 1.0000 100 chrXIV:253559-253919 1.0000 100 chrXV:620478-620838 1.0000 100 chrIV:1328808-1329168 1.0000 100 chrVIII:422993-423353 1.0000 100 chrII:414031-414391 1.0000 100 chrII:414256-414616 1.0000 100 chrII:604796-605156 1.0000 100 chrXI:107655-108015 1.0000 100 chrXVI:194139-194499 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 522 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 52177 N= 522 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.290 C 0.210 G 0.210 T 0.290 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HSF1/background): A 0.305 C 0.195 G 0.195 T 0.305 ******************************************************************************** ******************************************************************************** MOTIF WTGGCCRAGTGGKTTARGSS MEME-1 width = 20 sites = 112 llr = 1901 E-value = 4.2e-400 ******************************************************************************** -------------------------------------------------------------------------------- Motif WTGGCCRAGTGGKTTARGSS MEME-1 Description -------------------------------------------------------------------------------- Simplified A 42::::38::::::3a3::: pos.-specific C :1:26a1::11:12::::34 probability G 2:a83:5:a:7a31::6776 matrix T 47::2:11:93:577:13:: bits 2.4 * * * 2.1 * * * * 1.9 * * * * 1.7 ** * * * Relative 1.4 ** * ** * * ** Entropy 1.2 ** * ** * * *** (24.5 bits) 0.9 **** ***** * *** 0.7 ***** ************* 0.5 ******************* 0.2 ******************** 0.0 -------------------- Multilevel TTGGCCGAGTGGTTTAGGGG consensus A G A T GCA ATCC sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTGGCCRAGTGGKTTARGSS MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------- chrXII:592435-592739 - 57 1.65e-11 CAATGGGAGT TTGGCCGAGTGGTTTAAGGC GTCAGATTTA chrXII:731983-732281 + 14 1.65e-11 CAATGGGAGT TTGGCCGAGTGGTTTAAGGC GTCAGATTTA chrX:617752-618082 + 58 1.65e-11 CAATGGGAGT TTGGCCGAGTGGTTTAAGGC GTCAGATTTA chrIV:1305483-1305787 + 51 3.27e-11 TTAAGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrII:226951-227268 + 22 3.27e-11 ACGAGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrVIII:132958-133276 - 15 3.27e-11 AAGTGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrIV:437617-437975 + 32 3.27e-11 GTAAGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrV:86407-86779 + 67 3.27e-11 TTATGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrXII:167853-168183 - 32 3.27e-11 ATATGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrX:523904-524256 - 38 3.27e-11 TAAAGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrXIII:259052-259388 - 44 3.27e-11 GTATGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrV:288337-288677 - 42 4.09e-11 GATAGGCACT ATGGCCGAGTGGTTAAGGCG ACAGACTTGA chrXVI:689420-689786 + 18 4.09e-11 TTTGGGCACT ATGGCCGAGTGGTTAAGGCG ACAGACTTGA chrIII:227789-228156 + 26 4.09e-11 AAATGGCACT ATGGCCGAGTGGTTAAGGCG AGAGACTCGA chrIX:248648-249047 + 59 4.09e-11 TTTAGGCACT ATGGCCGAGTGGTTAAGGCG ACAGACTTGA chrXIV:726059-726312 - 57 5.13e-11 CTTTGGAGGG TTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrII:9458-9741 + 40 5.13e-11 TCGTGGAGGG TTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrXI:84058-84367 + 52 5.13e-11 GTATGGAGGG TTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrIV:519626-519905 + 34 5.13e-11 TTACGGAGGG TTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrVI:191474-191741 - 31 5.13e-11 TTCTGTCCCA GTGGCCGAGTGGTTAAGGCG ATGCCCTGCT chrXII:962900-963213 - 24 5.13e-11 CGACGGAGGG TTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrIV:1150718-1151090 - 62 5.13e-11 TTCAGTCCCA GTGGCCGAGTGGTTAAGGCG ATGCCTGCTA chrXII:784198-784565 + 29 5.13e-11 AACCGTCCCA GTGGCCGAGTGGTTAAGGCG ATGCCTGCTA chrXV:274500-274879 + 40 5.13e-11 TCGTGTCCCA GTGGCCGAGTGGTTAAGGCG ATGCCCTGCT chrX:424348-424685 - 24 5.13e-11 AGATGGAGGG TTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrXVI:810548-810816 + 50 1.07e-09 TTGCGACTCC ATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXI:74476-74790 + 47 1.07e-09 ATTAGACTCC ATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXIV:102561-102883 + 50 1.07e-09 ATAAGACTCC ATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXIV:632465-632775 + 35 1.07e-09 AAGTGACTCC ATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrVI:137355-137699 - 57 1.07e-09 GACTGACTCC ATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrIII:127564-127880 + 50 1.07e-09 AAATGACTCC ATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXV:228170-228493 + 56 1.07e-09 ATTAGACTCC ATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrVII:730982-731329 + 38 1.07e-09 AAAAGACTCC ATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrIX:174945-175159 + 35 1.65e-09 ACGAGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrXIV:602240-602482 + 7 1.65e-09 GGTCTC TTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXIV:560593-560831 - 78 1.65e-09 TCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrV:443134-443380 - 43 1.65e-09 ATTTGGTCTC TTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXI:458447-458758 + 11 1.65e-09 AAGTGGTTGT TTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrXIII:504727-505107 + 34 1.65e-09 AAGTGGTTGT TTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrIII:295338-295682 + 30 1.65e-09 TTAAGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrV:551201-551479 - 43 1.65e-09 TACAGGTCTC TTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrIV:434156-434446 - 60 1.65e-09 AGAAGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrIX:183325-183663 - 44 1.65e-09 TCCTGGTCTC TTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXV:113653-113934 + 65 1.65e-09 TTTAGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrVII:857278-857646 - 54 1.65e-09 AAGTGGTTGT TTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrXVI:880206-880532 - 25 1.65e-09 TAATGGTCTC TTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXII:628229-628594 + 28 1.65e-09 AAGTGGTTGT TTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrXIV:442859-443224 + 21 1.65e-09 AAGTGGTTGT TTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrXII:734647-734960 + 55 1.65e-09 GTTTGGTCTC TTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXVI:819369-819690 + 56 1.65e-09 GAATGGTCTC TTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrX:59024-59316 - 27 1.65e-09 AGAAGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrVII:422921-423297 + 39 1.65e-09 AAGTGGTTGT TTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrXIV:104667-105031 + 12 1.65e-09 CTGAGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrVII:738975-739302 + 40 1.65e-09 AATAGGTCTC TTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrII:266220-266592 + 28 1.65e-09 AACTGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrVII:205363-205725 + 33 1.65e-09 AAGTGGTTGT TTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrIX:325602-325916 + 45 1.65e-09 ACGAGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrVIII:116008-116342 - 29 1.65e-09 TAGAGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrXV:353937-354278 - 31 1.65e-09 TACTGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrII:197336-197635 + 65 1.65e-09 TCAAGGTCTC TTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXV:980574-980872 + 8 2.49e-09 AAATTGT ATGGGCGTGTGGTCTAGTGG AATGATTCTC chrVIII:388789-389155 - 56 2.49e-09 CAACAGATAC ATGGGCGTGTGGTCTAGTGG TATGATTCTC chrIII:142614-142929 - 33 9.36e-09 TCAAGATTAC TAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrIV:83387-83701 + 52 9.36e-09 CAAGTTCACT TAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrXV:464355-464635 + 3 1.04e-08 AC AAGGGCGTGTGGTCTAGTGG TATGATTCTC chrVII:930915-931170 - 14 1.04e-08 TATAATCAGT AAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrX:396646-396955 - 29 1.04e-08 TATCAAAAGT AAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrXIII:195988-196314 - 52 1.04e-08 ACAAGTTCAC AAGGGCGTGTGGTCTAGTGG TATGATTCTC chrVI:180864-181200 - 45 1.04e-08 TCCAAGAAAT AAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrVII:845491-845823 + 40 1.04e-08 TATAAATAAC AAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrV:61767-62093 - 63 1.04e-08 AACAAATAGT AAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrVI:162070-162385 + 49 1.04e-08 ACAAGAAAAC AAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrXVI:860210-860551 + 47 1.04e-08 TGTAAATAAC AAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrX:531705-532005 + 21 1.16e-08 AACAATTAGT GAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrIV:992678-993007 + 38 1.16e-08 CAACAATTGT GAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrXVI:572113-572481 + 20 1.58e-08 ACACAATACT TCGCGCAAGTGGTTTAGTGG TAAAATCCAA chrXV:300928-301308 + 27 1.58e-08 TCAGAAAAGA TCGGGCGTGTGGTCTAGTGG TATGATTCTC chrXIV:567993-568331 + 1 1.58e-08 . TCGGGCGTGTGGTCTAGTGG TATGATTCTC chrI:138979-139360 + 31 1.75e-08 ATCAATTAGT ACGGGCGTGTGGTCTAGTGG TATGATTCTC chrXV:282010-282320 + 47 1.93e-08 TAACATGAAA GCGCGCAAGTGGTTTAGTGG TAAAATCCAA chrIV:410232-410516 + 53 2.82e-08 CATACAAATA TTGGGCGTGTGGCGTAGTCG GTAGCGCGCT chrXII:656847-657137 - 47 2.82e-08 AACAAGAAAA TTGGGCGTGTGGCGTAGTCG GTAGCGCGCT chrVII:774177-774570 + 24 2.82e-08 CATCAATTAA TTGGGCGTGTGGCGTAGTCG GTAGCGCGCT chrXI:517820-518127 + 63 3.08e-08 TATATCTACT ATGGGCGTGTGGCGTAGTCG GTAGCGCGCT chrX:197219-197534 - 42 7.68e-08 TCAATAATAT TAGGGCGTGTGGCGTAGTCG GTAGCGCGCT chrV:438569-438854 + 45 8.93e-08 ATTAGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXV:663708-664018 - 47 8.93e-08 TAGTGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXIII:372360-372643 - 42 8.93e-08 ACCTGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXIII:420480-420808 - 42 8.93e-08 AACAGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXIII:586545-586864 - 30 8.93e-08 CTATGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrX:378199-378525 + 54 8.93e-08 AATAGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrV:469306-469615 + 53 8.93e-08 AATTGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXI:379530-379829 + 57 8.93e-08 AATAGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrVII:412166-412523 - 48 8.93e-08 AACTGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXI:308042-308378 - 32 8.93e-08 AAGTGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXV:226524-226853 - 26 8.93e-08 TCAAGAAATT CAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrVII:823349-823668 + 30 8.93e-08 GAGTGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXIII:321048-321354 - 51 1.11e-07 TCAATACAAA TCGGGCGTGTGGCGTAGTCG GTAGCGCGCT chrIII:123446-123793 - 62 1.11e-07 TTTTTCAAAG GAGGGCGTGTGGTCTAGAGG TATGATTCTC chrXV:594269-594568 - 40 1.46e-07 ATTGATTGAA ACGCGCAAGTGGTTCAGTGG TTAGAATTTA chrIV:619853-620190 - 45 2.58e-07 CTTGTTCCTC GTGGCCCAATGGTCACGGCG TCTGGCTACG chrXI:490805-491139 + 52 2.58e-07 CTTGTTCCTC GTGGCCCAATGGTCACGGCG TCTGGCTACG chrX:233773-234084 + 67 2.58e-07 CTTGTTCCTC GTGGCCCAATGGTCACGGCG TCTGGCTACG chrXII:374187-374531 + 52 2.58e-07 CTTGTTCCTC GTGGCCCAATGGTCACGGCG TCTGGCTACG chrV:138501-138895 + 16 2.90e-07 TCAATAAATA ATGCTCGCGTGGCGTAATGG CAACGCGTCT chrXIII:747800-748122 - 35 5.21e-07 AACATATGAC TAGCTCGCGTGGCGTAATGG CAACGCGTCT chrXI:162366-162703 - 57 5.21e-07 AAACAAATAT TAGCTCGCGTGGCGTAATGG CAACGCGTCT chrVII:736166-736503 + 54 5.21e-07 GTAATTTCAA TAGCTCGCGTGGCGTAATGG CAACGCGTCT chrXIII:131725-132051 - 41 5.21e-07 TCAAGAAATT TAGCTCGCGTGGCGTAATGG CAACGCGTCT chrXIV:631763-632042 - 48 5.75e-07 ACAACTTCTA CCGGGCGTGTGGTCTAGAGG TATGATTCTC chrII:326694-327031 - 28 6.62e-07 TCCGGGTCCA ATGGTCCAGTGGTTCAAGAC GTCGCCTTTA chrXVI:435786-436129 - 40 2.90e-06 TATACAACAA AAGCTCGTATGGCGCAGTGG TAGCGCAGCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTGGCCRAGTGGKTTARGSS MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:592435-592739 1.7e-11 56_[-1]_24 chrXII:731983-732281 1.7e-11 13_[+1]_67 chrX:617752-618082 1.7e-11 57_[+1]_23 chrIV:1305483-1305787 3.3e-11 50_[+1]_30 chrII:226951-227268 3.3e-11 21_[+1]_59 chrVIII:132958-133276 3.3e-11 14_[-1]_66 chrIV:437617-437975 3.3e-11 31_[+1]_49 chrV:86407-86779 3.3e-11 66_[+1]_14 chrXII:167853-168183 3.3e-11 31_[-1]_49 chrX:523904-524256 3.3e-11 37_[-1]_43 chrXIII:259052-259388 3.3e-11 43_[-1]_37 chrV:288337-288677 4.1e-11 41_[-1]_39 chrXVI:689420-689786 4.1e-11 17_[+1]_63 chrIII:227789-228156 4.1e-11 25_[+1]_55 chrIX:248648-249047 4.1e-11 58_[+1]_22 chrXIV:726059-726312 5.1e-11 56_[-1]_24 chrII:9458-9741 5.1e-11 39_[+1]_41 chrXI:84058-84367 5.1e-11 51_[+1]_29 chrIV:519626-519905 5.1e-11 33_[+1]_47 chrVI:191474-191741 5.1e-11 30_[-1]_50 chrXII:962900-963213 5.1e-11 23_[-1]_57 chrIV:1150718-1151090 5.1e-11 61_[-1]_19 chrXII:784198-784565 5.1e-11 28_[+1]_52 chrXV:274500-274879 5.1e-11 39_[+1]_41 chrX:424348-424685 5.1e-11 23_[-1]_57 chrXVI:810548-810816 1.1e-09 49_[+1]_31 chrXI:74476-74790 1.1e-09 46_[+1]_34 chrXIV:102561-102883 1.1e-09 49_[+1]_31 chrXIV:632465-632775 1.1e-09 34_[+1]_46 chrVI:137355-137699 1.1e-09 56_[-1]_24 chrIII:127564-127880 1.1e-09 49_[+1]_31 chrXV:228170-228493 1.1e-09 55_[+1]_25 chrVII:730982-731329 1.1e-09 37_[+1]_43 chrIX:174945-175159 1.7e-09 34_[+1]_46 chrXIV:602240-602482 1.7e-09 6_[+1]_74 chrXIV:560593-560831 1.7e-09 77_[-1]_3 chrV:443134-443380 1.7e-09 42_[-1]_38 chrXI:458447-458758 1.7e-09 10_[+1]_70 chrXIII:504727-505107 1.7e-09 33_[+1]_47 chrIII:295338-295682 1.7e-09 29_[+1]_51 chrV:551201-551479 1.7e-09 42_[-1]_38 chrIV:434156-434446 1.7e-09 59_[-1]_21 chrIX:183325-183663 1.7e-09 43_[-1]_37 chrXV:113653-113934 1.7e-09 64_[+1]_16 chrVII:857278-857646 1.7e-09 53_[-1]_27 chrXVI:880206-880532 1.7e-09 24_[-1]_56 chrXII:628229-628594 1.7e-09 27_[+1]_53 chrXIV:442859-443224 1.7e-09 20_[+1]_60 chrXII:734647-734960 1.7e-09 54_[+1]_26 chrXVI:819369-819690 1.7e-09 55_[+1]_25 chrX:59024-59316 1.7e-09 26_[-1]_54 chrVII:422921-423297 1.7e-09 38_[+1]_42 chrXIV:104667-105031 1.7e-09 11_[+1]_69 chrVII:738975-739302 1.7e-09 39_[+1]_41 chrII:266220-266592 1.7e-09 27_[+1]_53 chrVII:205363-205725 1.7e-09 32_[+1]_48 chrIX:325602-325916 1.7e-09 44_[+1]_36 chrVIII:116008-116342 1.7e-09 28_[-1]_52 chrXV:353937-354278 1.7e-09 30_[-1]_50 chrII:197336-197635 1.7e-09 64_[+1]_16 chrXV:980574-980872 2.5e-09 7_[+1]_73 chrVIII:388789-389155 2.5e-09 55_[-1]_25 chrIII:142614-142929 9.4e-09 32_[-1]_48 chrIV:83387-83701 9.4e-09 51_[+1]_29 chrXV:464355-464635 1e-08 2_[+1]_78 chrVII:930915-931170 1e-08 13_[-1]_67 chrX:396646-396955 1e-08 28_[-1]_52 chrXIII:195988-196314 1e-08 51_[-1]_29 chrVI:180864-181200 1e-08 44_[-1]_36 chrVII:845491-845823 1e-08 39_[+1]_41 chrV:61767-62093 1e-08 62_[-1]_18 chrVI:162070-162385 1e-08 48_[+1]_32 chrXVI:860210-860551 1e-08 46_[+1]_34 chrX:531705-532005 1.2e-08 20_[+1]_60 chrIV:992678-993007 1.2e-08 37_[+1]_43 chrXVI:572113-572481 1.6e-08 19_[+1]_61 chrXV:300928-301308 1.6e-08 26_[+1]_54 chrXIV:567993-568331 1.6e-08 [+1]_80 chrI:138979-139360 1.7e-08 30_[+1]_50 chrXV:282010-282320 1.9e-08 46_[+1]_34 chrIV:410232-410516 2.8e-08 52_[+1]_28 chrXII:656847-657137 2.8e-08 46_[-1]_34 chrVII:774177-774570 2.8e-08 23_[+1]_57 chrXI:517820-518127 3.1e-08 62_[+1]_18 chrX:197219-197534 7.7e-08 41_[-1]_39 chrV:438569-438854 8.9e-08 44_[+1]_36 chrXV:663708-664018 8.9e-08 46_[-1]_34 chrXIII:372360-372643 8.9e-08 41_[-1]_39 chrXIII:420480-420808 8.9e-08 41_[-1]_39 chrXIII:586545-586864 8.9e-08 29_[-1]_51 chrX:378199-378525 8.9e-08 53_[+1]_27 chrV:469306-469615 8.9e-08 52_[+1]_28 chrXI:379530-379829 8.9e-08 56_[+1]_24 chrVII:412166-412523 8.9e-08 47_[-1]_33 chrXI:308042-308378 8.9e-08 31_[-1]_49 chrXV:226524-226853 8.9e-08 25_[-1]_55 chrVII:823349-823668 8.9e-08 29_[+1]_51 chrXIII:321048-321354 1.1e-07 50_[-1]_30 chrIII:123446-123793 1.1e-07 61_[-1]_19 chrXV:594269-594568 1.5e-07 39_[-1]_41 chrIV:619853-620190 2.6e-07 44_[-1]_36 chrXI:490805-491139 2.6e-07 51_[+1]_29 chrX:233773-234084 2.6e-07 66_[+1]_14 chrXII:374187-374531 2.6e-07 51_[+1]_29 chrV:138501-138895 2.9e-07 15_[+1]_65 chrXIII:747800-748122 5.2e-07 34_[-1]_46 chrXI:162366-162703 5.2e-07 56_[-1]_24 chrVII:736166-736503 5.2e-07 53_[+1]_27 chrXIII:131725-132051 5.2e-07 40_[-1]_40 chrXIV:631763-632042 5.7e-07 47_[-1]_33 chrII:326694-327031 6.6e-07 27_[-1]_53 chrXVI:435786-436129 2.9e-06 39_[-1]_41 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTGGCCRAGTGGKTTARGSS MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WTGGCCRAGTGGKTTARGSS width=20 seqs=112 chrXII:592435-592739 ( 57) TTGGCCGAGTGGTTTAAGGC 1 chrXII:731983-732281 ( 14) TTGGCCGAGTGGTTTAAGGC 1 chrX:617752-618082 ( 58) TTGGCCGAGTGGTTTAAGGC 1 chrIV:1305483-1305787 ( 51) TTGGCCGAGTGGTTAAGGCG 1 chrII:226951-227268 ( 22) TTGGCCGAGTGGTTAAGGCG 1 chrVIII:132958-133276 ( 15) TTGGCCGAGTGGTTAAGGCG 1 chrIV:437617-437975 ( 32) TTGGCCGAGTGGTTAAGGCG 1 chrV:86407-86779 ( 67) TTGGCCGAGTGGTTAAGGCG 1 chrXII:167853-168183 ( 32) TTGGCCGAGTGGTTAAGGCG 1 chrX:523904-524256 ( 38) TTGGCCGAGTGGTTAAGGCG 1 chrXIII:259052-259388 ( 44) TTGGCCGAGTGGTTAAGGCG 1 chrV:288337-288677 ( 42) ATGGCCGAGTGGTTAAGGCG 1 chrXVI:689420-689786 ( 18) ATGGCCGAGTGGTTAAGGCG 1 chrIII:227789-228156 ( 26) ATGGCCGAGTGGTTAAGGCG 1 chrIX:248648-249047 ( 59) ATGGCCGAGTGGTTAAGGCG 1 chrXIV:726059-726312 ( 57) TTGGCCGAGTGGTCTAAGGC 1 chrII:9458-9741 ( 40) TTGGCCGAGTGGTCTAAGGC 1 chrXI:84058-84367 ( 52) TTGGCCGAGTGGTCTAAGGC 1 chrIV:519626-519905 ( 34) TTGGCCGAGTGGTCTAAGGC 1 chrVI:191474-191741 ( 31) GTGGCCGAGTGGTTAAGGCG 1 chrXII:962900-963213 ( 24) TTGGCCGAGTGGTCTAAGGC 1 chrIV:1150718-1151090 ( 62) GTGGCCGAGTGGTTAAGGCG 1 chrXII:784198-784565 ( 29) GTGGCCGAGTGGTTAAGGCG 1 chrXV:274500-274879 ( 40) GTGGCCGAGTGGTTAAGGCG 1 chrX:424348-424685 ( 24) TTGGCCGAGTGGTCTAAGGC 1 chrXVI:810548-810816 ( 50) ATGGCCAAGTTGGTTAAGGC 1 chrXI:74476-74790 ( 47) ATGGCCAAGTTGGTTAAGGC 1 chrXIV:102561-102883 ( 50) ATGGCCAAGTTGGTTAAGGC 1 chrXIV:632465-632775 ( 35) ATGGCCAAGTTGGTTAAGGC 1 chrVI:137355-137699 ( 57) ATGGCCAAGTTGGTTAAGGC 1 chrIII:127564-127880 ( 50) ATGGCCAAGTTGGTTAAGGC 1 chrXV:228170-228493 ( 56) ATGGCCAAGTTGGTTAAGGC 1 chrVII:730982-731329 ( 38) ATGGCCAAGTTGGTTAAGGC 1 chrIX:174945-175159 ( 35) ATGGCCAAGTTGGTAAGGCG 1 chrXIV:602240-602482 ( 7) TTGGCCCAGTTGGTTAAGGC 1 chrXIV:560593-560831 ( 78) ATGGCCAAGTTGGTAAGGCG 1 chrV:443134-443380 ( 43) TTGGCCCAGTTGGTTAAGGC 1 chrXI:458447-458758 ( 11) TTGGCCGAGCGGTCTAAGGC 1 chrXIII:504727-505107 ( 34) TTGGCCGAGCGGTCTAAGGC 1 chrIII:295338-295682 ( 30) ATGGCCAAGTTGGTAAGGCG 1 chrV:551201-551479 ( 43) TTGGCCCAGTTGGTTAAGGC 1 chrIV:434156-434446 ( 60) ATGGCCAAGTTGGTAAGGCG 1 chrIX:183325-183663 ( 44) TTGGCCCAGTTGGTTAAGGC 1 chrXV:113653-113934 ( 65) ATGGCCAAGTTGGTAAGGCG 1 chrVII:857278-857646 ( 54) TTGGCCGAGCGGTCTAAGGC 1 chrXVI:880206-880532 ( 25) TTGGCCCAGTTGGTTAAGGC 1 chrXII:628229-628594 ( 28) TTGGCCGAGCGGTCTAAGGC 1 chrXIV:442859-443224 ( 21) TTGGCCGAGCGGTCTAAGGC 1 chrXII:734647-734960 ( 55) TTGGCCCAGTTGGTTAAGGC 1 chrXVI:819369-819690 ( 56) TTGGCCCAGTTGGTTAAGGC 1 chrX:59024-59316 ( 27) ATGGCCAAGTTGGTAAGGCG 1 chrVII:422921-423297 ( 39) TTGGCCGAGCGGTCTAAGGC 1 chrXIV:104667-105031 ( 12) ATGGCCAAGTTGGTAAGGCG 1 chrVII:738975-739302 ( 40) TTGGCCCAGTTGGTTAAGGC 1 chrII:266220-266592 ( 28) ATGGCCAAGTTGGTAAGGCG 1 chrVII:205363-205725 ( 33) TTGGCCGAGCGGTCTAAGGC 1 chrIX:325602-325916 ( 45) ATGGCCAAGTTGGTAAGGCG 1 chrVIII:116008-116342 ( 29) ATGGCCAAGTTGGTAAGGCG 1 chrXV:353937-354278 ( 31) ATGGCCAAGTTGGTAAGGCG 1 chrII:197336-197635 ( 65) TTGGCCCAGTTGGTTAAGGC 1 chrXV:980574-980872 ( 8) ATGGGCGTGTGGTCTAGTGG 1 chrVIII:388789-389155 ( 56) ATGGGCGTGTGGTCTAGTGG 1 chrIII:142614-142929 ( 33) TAGCGCAAGTGGTTTAGTGG 1 chrIV:83387-83701 ( 52) TAGCGCAAGTGGTTTAGTGG 1 chrXV:464355-464635 ( 3) AAGGGCGTGTGGTCTAGTGG 1 chrVII:930915-931170 ( 14) AAGCGCAAGTGGTTTAGTGG 1 chrX:396646-396955 ( 29) AAGCGCAAGTGGTTTAGTGG 1 chrXIII:195988-196314 ( 52) AAGGGCGTGTGGTCTAGTGG 1 chrVI:180864-181200 ( 45) AAGCGCAAGTGGTTTAGTGG 1 chrVII:845491-845823 ( 40) AAGCGCAAGTGGTTTAGTGG 1 chrV:61767-62093 ( 63) AAGCGCAAGTGGTTTAGTGG 1 chrVI:162070-162385 ( 49) AAGCGCAAGTGGTTTAGTGG 1 chrXVI:860210-860551 ( 47) AAGCGCAAGTGGTTTAGTGG 1 chrX:531705-532005 ( 21) GAGCGCAAGTGGTTTAGTGG 1 chrIV:992678-993007 ( 38) GAGCGCAAGTGGTTTAGTGG 1 chrXVI:572113-572481 ( 20) TCGCGCAAGTGGTTTAGTGG 1 chrXV:300928-301308 ( 27) TCGGGCGTGTGGTCTAGTGG 1 chrXIV:567993-568331 ( 1) TCGGGCGTGTGGTCTAGTGG 1 chrI:138979-139360 ( 31) ACGGGCGTGTGGTCTAGTGG 1 chrXV:282010-282320 ( 47) GCGCGCAAGTGGTTTAGTGG 1 chrIV:410232-410516 ( 53) TTGGGCGTGTGGCGTAGTCG 1 chrXII:656847-657137 ( 47) TTGGGCGTGTGGCGTAGTCG 1 chrVII:774177-774570 ( 24) TTGGGCGTGTGGCGTAGTCG 1 chrXI:517820-518127 ( 63) ATGGGCGTGTGGCGTAGTCG 1 chrX:197219-197534 ( 42) TAGGGCGTGTGGCGTAGTCG 1 chrV:438569-438854 ( 45) GTGGTCTAGTCGGTTATGGC 1 chrXV:663708-664018 ( 47) GTGGTCTAGTCGGTTATGGC 1 chrXIII:372360-372643 ( 42) GTGGTCTAGTCGGTTATGGC 1 chrXIII:420480-420808 ( 42) GTGGTCTAGTCGGTTATGGC 1 chrXIII:586545-586864 ( 30) GTGGTCTAGTCGGTTATGGC 1 chrX:378199-378525 ( 54) GTGGTCTAGTCGGTTATGGC 1 chrV:469306-469615 ( 53) GTGGTCTAGTCGGTTATGGC 1 chrXI:379530-379829 ( 57) GTGGTCTAGTCGGTTATGGC 1 chrVII:412166-412523 ( 48) GTGGTCTAGTCGGTTATGGC 1 chrXI:308042-308378 ( 32) GTGGTCTAGTCGGTTATGGC 1 chrXV:226524-226853 ( 26) CAGCGCAAGTGGTTTAGTGG 1 chrVII:823349-823668 ( 30) GTGGTCTAGTCGGTTATGGC 1 chrXIII:321048-321354 ( 51) TCGGGCGTGTGGCGTAGTCG 1 chrIII:123446-123793 ( 62) GAGGGCGTGTGGTCTAGAGG 1 chrXV:594269-594568 ( 40) ACGCGCAAGTGGTTCAGTGG 1 chrIV:619853-620190 ( 45) GTGGCCCAATGGTCACGGCG 1 chrXI:490805-491139 ( 52) GTGGCCCAATGGTCACGGCG 1 chrX:233773-234084 ( 67) GTGGCCCAATGGTCACGGCG 1 chrXII:374187-374531 ( 52) GTGGCCCAATGGTCACGGCG 1 chrV:138501-138895 ( 16) ATGCTCGCGTGGCGTAATGG 1 chrXIII:747800-748122 ( 35) TAGCTCGCGTGGCGTAATGG 1 chrXI:162366-162703 ( 57) TAGCTCGCGTGGCGTAATGG 1 chrVII:736166-736503 ( 54) TAGCTCGCGTGGCGTAATGG 1 chrXIII:131725-132051 ( 41) TAGCTCGCGTGGCGTAATGG 1 chrXIV:631763-632042 ( 48) CCGGGCGTGTGGTCTAGAGG 1 chrII:326694-327031 ( 28) ATGGTCCAGTGGTTCAAGAC 1 chrXVI:435786-436129 ( 40) AAGCTCGTATGGCGCAGTGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTGGCCRAGTGGKTTARGSS MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 42259 bayes= 10.2283 E= 4.2e-400 23 -344 8 46 -70 -145 -1345 128 -1345 -1345 236 -1345 -1345 -5 206 -1345 -1345 155 46 -93 -1345 236 -1345 -1345 -1 -64 128 -164 141 -212 -1345 -110 -277 -1345 230 -1345 -1345 -164 -1345 162 -1345 -99 174 -29 -1345 -1345 236 -1345 -1345 -86 84 83 -1345 25 -86 111 -14 -286 -1345 119 166 -245 -1345 -1345 19 -1345 151 -164 -409 -1345 180 -1 -509 76 176 -1345 -1345 105 162 -1345 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTGGCCRAGTGGKTTARGSS MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 112 E= 4.2e-400 0.357143 0.017857 0.205357 0.419643 0.187500 0.071429 0.000000 0.741071 0.000000 0.000000 1.000000 0.000000 0.000000 0.187500 0.812500 0.000000 0.000000 0.571429 0.267857 0.160714 0.000000 1.000000 0.000000 0.000000 0.303571 0.125000 0.473214 0.098214 0.812500 0.044643 0.000000 0.142857 0.044643 0.000000 0.955357 0.000000 0.000000 0.062500 0.000000 0.937500 0.000000 0.098214 0.651786 0.250000 0.000000 0.000000 1.000000 0.000000 0.000000 0.107143 0.348214 0.544643 0.000000 0.232143 0.107143 0.660714 0.276786 0.026786 0.000000 0.696429 0.964286 0.035714 0.000000 0.000000 0.348214 0.000000 0.553571 0.098214 0.017857 0.000000 0.678571 0.303571 0.008929 0.330357 0.660714 0.000000 0.000000 0.401786 0.598214 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTGGCCRAGTGGKTTARGSS MEME-1 regular expression -------------------------------------------------------------------------------- [TAG]TGG[CG]C[GA]AGT[GT]G[TG][TC][TA]A[GA][GT][GC][GC] -------------------------------------------------------------------------------- Time 261.03 secs. ******************************************************************************** ******************************************************************************** MOTIF BWTAGBKYARTKGGTAKMRCGTHHSRCT MEME-2 width = 28 sites = 87 llr = 1573 E-value = 3.7e-314 ******************************************************************************** -------------------------------------------------------------------------------- Motif BWTAGBKYARTKGGTAKMRCGTHHSRCT MEME-2 Description -------------------------------------------------------------------------------- Simplified A 13:6::::8511::1a:44:2:24:4:: pos.-specific C 31:::4251:21:2:::6:9:342418: probability G 3212a251:514a61:6:6:6::264:: matrix T 4492:3341:64:27:3::12732:12a bits 2.4 * 2.1 * * 1.9 * * * 1.7 * * * * ** Relative 1.4 * * * * ** Entropy 1.2 * * * * ** * ** (26.1 bits) 0.9 * * ** ** ***** * * ** 0.7 * ** *** ******** * * ** 0.5 ******** ************ **** 0.2 * ********************* **** 0.0 ---------------------------- Multilevel TTTAGCGCAATTGGTAGCGCGTCAGGCT consensus CA T TTT G G TAA CTTCA sequence G GC AC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BWTAGBKYARTKGGTAKMRCGTHHSRCT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------------- chrXV:438490-438847 + 30 2.06e-13 ACTCATCCTT GTTAGCTCAGTTGGTAGAGCGTTCGGCT TTTAAGCGCA chrIV:359423-359756 + 43 2.06e-13 ACTCATCCTT GTTAGCTCAGTTGGTAGAGCGTTCGGCT TTTAAGCGCA chrXII:875229-875576 + 29 2.06e-13 ACTCATCCTT GTTAGCTCAGTTGGTAGAGCGTTCGGCT TTTAAGCGCA chrXI:578805-579223 + 6 2.06e-13 TCCTT GTTAGCTCAGTTGGTAGAGCGTTCGGCT TTTAAGCGCA chrVII:115345-115690 + 26 2.06e-13 ACTCATCCTT GTTAGCTCAGTTGGTAGAGCGTTCGGCT TTTAAGCGCA chrXVI:769106-769483 - 26 2.06e-13 ACTCATCCTT GTTAGCTCAGTTGGTAGAGCGTTCGGCT TTTAAGCGCA chrIV:1352395-1352661 - 28 2.46e-12 AAATAGCCTT GTTGGCGCAATCGGTAGCGCGTATGACT CTTAATCATA chrVII:185597-185919 - 46 2.46e-12 AAATAGCCTT GTTGGCGCAATCGGTAGCGCGTATGACT CTTAATCATA chrV:435660-435947 - 39 2.46e-12 TAAGAGCCTT GTTGGCGCAATCGGTAGCGCGTATGACT CTTAATCATA chrVI:226583-226872 - 51 2.46e-12 AAAATGCCTT GTTGGCGCAATCGGTAGCGCGTATGACT CTTAATCATA chrIV:1201613-1201912 + 43 2.46e-12 AAATAGCCTT GTTGGCGCAATCGGTAGCGCGTATGACT CTTAATCATA chrXIII:480531-480839 - 26 2.46e-12 AAGTAGCCTT GTTGGCGCAATCGGTAGCGCGTATGACT CTTAATCATA chrVII:876237-876551 + 55 2.46e-12 GAATAGCCTT GTTGGCGCAATCGGTAGCGCGTATGACT CTTAATCATA chrV:135300-135621 - 55 2.46e-12 AAAAAGCCTT GTTGGCGCAATCGGTAGCGCGTATGACT CTTAATCATA chrVII:122117-122470 + 31 2.46e-12 AATTAGCCTT GTTGGCGCAATCGGTAGCGCGTATGACT CTTAATCATA chrIX:300137-300462 - 19 2.46e-12 AAATAGCCTT GTTGGCGCAATCGGTAGCGCGTATGACT CTTAATCATA chrX:414816-415154 + 36 2.46e-12 AATTAGCCTT GTTGGCGCAATCGGTAGCGCGTATGACT CTTAATCATA chrVII:794262-794571 + 56 3.67e-12 ATTGCGGGCA CATGGCGCAGTTGGTAGCGCGCTTCCCT TGCAAGGAAG chrXII:214794-215090 - 31 3.67e-12 TTTTAGGGCA CATGGCGCAGTTGGTAGCGCGCTTCCCT TGCAAGGAAG chrI:166143-166471 + 15 3.67e-12 GAGTTGGGCA CATGGCGCAGTTGGTAGCGCGCTTCCCT TGCAAGGAAG chrV:311885-312252 - 45 3.67e-12 ATTCTGGGCA CATGGCGCAGTTGGTAGCGCGCTTCCCT TGCAAGGAAG chrXIV:374739-374998 + 56 5.40e-12 AATAAGCGGA CTTAGCTCAGTTGGGAGAGCGCCAGACT GAAGAAAAAC chrIV:1095266-1095618 - 37 5.40e-12 TGTTAGCGGA CTTAGCTCAGTTGGGAGAGCGCCAGACT GAAGAAAAAA chrVIII:358397-358730 - 24 6.53e-12 AGTAAGCGGA TTTAGCTCAGTTGGGAGAGCGCCAGACT GAAGAAAAAA chrXIII:352123-352421 + 63 6.53e-12 TATAAGCGGA TTTAGCTCAGTTGGGAGAGCGCCAGACT GAAGAAATAC chrVIII:237742-238081 - 46 6.53e-12 AGTAAGCGGA TTTAGCTCAGTTGGGAGAGCGCCAGACT GAAGAAAAAA chrVII:440625-440964 - 31 6.53e-12 TATATGCGGA TTTAGCTCAGTTGGGAGAGCGCCAGACT GAAGAAAAAA chrXVI:560082-560440 - 46 6.53e-12 ATTGAGCGGA TTTAGCTCAGTTGGGAGAGCGCCAGACT GAAGAAAAAA chrVI:157859-158170 - 11 6.53e-12 TAGAAGCGGA TTTAGCTCAGTTGGGAGAGCGCCAGACT GAAGAAAAAA chrII:36249-36560 + 49 6.53e-12 TGTAAGCGGA TTTAGCTCAGTTGGGAGAGCGCCAGACT GAAGAAAAAC chrXVI:622448-622803 - 24 6.53e-12 GATATGCGGA TTTAGCTCAGTTGGGAGAGCGCCAGACT GAAGAAAAAA chrIII:82428-82593 - 41 8.97e-10 TGTTATCCGA TATAGTGTAACGGCTATCACATCACGCT TTCACCGTGG chrV:487245-487520 - 38 8.97e-10 TTTAATCCGA TATAGTGTAACGGCTATCACATCACGCT TTCACCGTGG chrIX:370260-370568 + 58 8.97e-10 TATAATCCGA TATAGTGTAACGGCTATCACATCACGCT TTCACCGTGG chrV:354777-355076 + 63 8.97e-10 TGTAATCCGA TATAGTGTAACGGCTATCACATCACGCT TTCACCGTGG chrXI:140920-141247 - 24 8.97e-10 TGTAATCCGA TATAGTGTAACGGCTATCACATCACGCT TTCACCGTGG chrXIII:290662-290958 + 46 8.97e-10 TATAATCCGA TATAGTGTAACGGCTATCACATCACGCT TTCACCGTGG chrX:115841-116179 - 18 8.97e-10 TATAATCCGA TATAGTGTAACGGCTATCACATCACGCT TTCACCGTGG chrVII:541703-542075 + 16 8.97e-10 TACCATCCGA TATAGTGTAACGGCTATCACATCACGCT TTCACCGTGG chrII:645017-645334 + 47 8.97e-10 TATTATCCGA TATAGTGTAACGGCTATCACATCACGCT TTCACCGTGG chrV:176952-177291 + 33 8.97e-10 TTTGATCCGA TATAGTGTAACGGCTATCACATCACGCT TTCACCGTGG chrXVI:210095-210424 - 22 8.97e-10 TATTGTCCGA TATAGTGTAACGGCTATCACATCACGCT TTCACCGTGG chrXII:797010-797349 + 54 8.97e-10 TGTCGTCCGA TATAGTGTAACGGCTATCACATCACGCT TTCACCGTGG chrIV:884228-884582 + 11 3.08e-09 AAAATGCTCG TGTAGCTCAGTGGTTAGAGCTTCGTGCT TATAGCAACA chrXII:605187-605577 - 68 3.08e-09 GCTCG TGTAGCTCAGTGGTTAGAGCTTCGTGCT TATAGCAACA chrIV:802634-802873 - 67 4.20e-09 CGGTCC TATAGTGTAGTGGTTATCACTTTCGGTT TTGATCCGGA chrII:350692-350966 + 53 4.20e-09 AAAAGGGTTT TATAGTGTAGTGGTTATCACTTTCGGTT TTGATCCGGA chrV:131011-131314 - 9 4.20e-09 TAAGAGGTTT TATAGTGTAGTGGTTATCACTTTCGGTT TTGATCCG chrIV:520810-521147 + 49 4.20e-09 TTTAGGGTCC TATAGTGTAGTGGTTATCACTTTCGGTT TTGATCCGGA chrVIII:134161-134499 + 46 4.20e-09 GTTCCGGTCC TATAGTGTAGTGGTTATCACTTTCGGTT TTGATCCGGA chrIII:168205-168550 - 13 4.20e-09 GTCCTGGTCC TATAGTGTAGTGGTTATCACTTTCGGTT TTGATCCGGA chrXII:448505-448868 - 53 4.20e-09 GTTCCGGTCC TATAGTGTAGTGGTTATCACTTTCGGTT TTGATCCGGA chrXIII:808140-808468 - 31 4.20e-09 AAAAAGGTCC TATAGTGTAGTGGTTATCACTTTCGGTT CTGATCCGAA chrIX:197446-197749 + 50 6.89e-09 TCAAATCCGA TGTAGTGTAACGGCTATCACATCACGTT CTCACCGTGG chrIV:1017077-1017447 - 34 6.89e-09 TACAATCCGA TGTAGTGTAACGGCTATCACATCACGTT CTCACCGTGG chrXV:976348-976593 + 6 1.00e-08 GCTTC AGTAGCTCAGTAGGAAGAGCGTCAGTCT CATAATCTGA chrXIII:572749-573113 - 42 1.00e-08 AGACAGCTTC AGTAGCTCAGTAGGAAGAGCGTCAGTCT CATAATCTGA chrX:422782-423099 + 52 1.00e-08 TGTATGCTTC AGTAGCTCAGTAGGAAGAGCGTCAGTCT CATAATCTGA chrX:390942-391285 - 20 1.00e-08 ATAGTGCTTC AGTAGCTCAGTAGGAAGAGCGTCAGTCT CATAATCTGA chrIV:1175673-1176010 + 43 1.00e-08 ACAAAGCTTC AGTAGCTCAGTAGGAAGAGCGTCAGTCT CATAATCTGA chrVIII:475579-475919 - 47 3.08e-08 AGTCTGTTCC AATAGTGTAGCGGCTATCACGTTGCCTT CACACGGCAA chrIV:1075366-1075708 - 25 3.08e-08 ATATTGTTCC AATAGTGTAGCGGCTATCACGTTGCCTT CACACGGCAA chrVII:878601-878972 - 48 3.90e-08 CAAGATGAAG CGGTGGCTCAATGGTAGAGCTTTCGACT CCAATTAAAT chrXI:302752-303129 + 32 3.90e-08 CAAGATGAAG CGGTGGCTCAATGGTAGAGCTTTCGACT CCAATTAAAT chrVII:287249-287614 - 43 3.90e-08 CAAGATGAAG CGGTGGCTCAATGGTAGAGCTTTCGACT CCAATTAAAT chrXIII:379233-379568 - 27 3.90e-08 AAAGTTGAAG CGGTGGCTCAATGGTAGAGCTTTCGACT CCAATTAAAT chrX:415847-416208 - 28 3.90e-08 AAAGTTGAAG CGGTGGCTCAATGGTAGAGCTTTCGACT CCAATTAAAT chrX:517724-518035 - 24 5.29e-08 AAGTTAAGCG CCGTGGCGCAGTGGAAGCGCGCAGGGCT CATAACCCTG chrXV:710053-710338 + 60 5.29e-08 ATTAGCAGCG CCGTGGCGCAGTGGAAGCGCGCAGGGCT CATAACCCTG chrXVI:338763-339079 - 17 5.29e-08 TTTAGCAGCG CCGTGGCGCAGTGGAAGCGCGCAGGGCT CATAACCCTG chrIII:149768-150090 + 45 5.29e-08 ATGTTGAGCG CCGTGGCGCAGTGGAAGCGCGCAGGGCT CATAACCCTG chrV:99968-100299 + 54 5.29e-08 TGGCTAAGCG CCGTGGCGCAGTGGAAGCGCGCAGGGCT CATAACCCTG chrXV:110861-111127 - 57 7.10e-08 AACCCGGGCG GTTAGTGTAGTGGTTATCATCCCACCCT TCCAAGGTGG chrVII:779452-779761 + 65 7.10e-08 ACCCCGGGCG GTTAGTGTAGTGGTTATCATCCCACCCT TCCAAGGT chrXIV:96127-96458 - 38 7.10e-08 CACATGGGCG GTTAGTGTAGTGGTTATCATCCCACCCT TCCAAGGTGG chrXI:46680-46952 - 9 8.77e-08 TACTCAGCCC TTTTGGCCAAGTGGTAAGGCATCGCACT CGTAATGC chrVIII:466894-467122 + 36 1.23e-07 TTTTTAGCCT CCTTAGCTTAGTGGTAGAGCGTTGCACT TGTAATGCAA chrVII:1004085-1004394 + 31 1.23e-07 GGGTTTGCCT CCTTAGCTTAGTGGTAGAGCGTTGCACT TGTAATGCAA chrXVI:744132-744458 + 43 1.23e-07 GTAAAAGCCT CCTTAGCTTAGTGGTAGAGCGTTGCACT TGTAATGCAA chrVII:661594-661924 + 44 1.23e-07 AAATTTGCCT CCTTAGCTTAGTGGTAGAGCGTTGCACT TGTAATGCAA chrX:538435-538713 + 35 1.31e-07 AAGTTGGTTC CGTTGGCGTAATGGTAACGCGTCTCCCT CCTAAGGAGA chrXII:818488-818773 + 34 3.45e-07 ATTATGCTCC TCTAGTGCAATGGTTAGCATGCATTCTT CCGGTGGCTG chrVIII:62620-62923 + 39 5.30e-07 CATATGCCAT CTTAGTATAGTGGTTAGTACACATCGTT GTGGCCGATG chrXIII:362928-363227 + 42 5.30e-07 AGTTTGCCAT CTTAGTATAGTGGTTAGTACACATCGTT GTGGCCGATG chrX:374320-374734 - 69 7.87e-07 GCTC GCGTGGCGTAATGGCAACGCGTCTGACT TCTAATCAGA chrVII:828529-828958 - 70 7.87e-07 CTC GCGTGGCGTAATGGCAACGCGTCTGACT TCTAATCAGA chrXII:92476-92718 + 5 4.29e-06 GGGC GTGTGGTCTAGTGGTATGATTCTCGCTT TGGGCGACTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BWTAGBKYARTKGGTAKMRCGTHHSRCT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXV:438490-438847 2.1e-13 29_[+2]_43 chrIV:359423-359756 2.1e-13 42_[+2]_30 chrXII:875229-875576 2.1e-13 28_[+2]_44 chrXI:578805-579223 2.1e-13 5_[+2]_67 chrVII:115345-115690 2.1e-13 25_[+2]_47 chrXVI:769106-769483 2.1e-13 25_[-2]_47 chrIV:1352395-1352661 2.5e-12 27_[-2]_45 chrVII:185597-185919 2.5e-12 45_[-2]_27 chrV:435660-435947 2.5e-12 38_[-2]_34 chrVI:226583-226872 2.5e-12 50_[-2]_22 chrIV:1201613-1201912 2.5e-12 42_[+2]_30 chrXIII:480531-480839 2.5e-12 25_[-2]_47 chrVII:876237-876551 2.5e-12 54_[+2]_18 chrV:135300-135621 2.5e-12 54_[-2]_18 chrVII:122117-122470 2.5e-12 30_[+2]_42 chrIX:300137-300462 2.5e-12 18_[-2]_54 chrX:414816-415154 2.5e-12 35_[+2]_37 chrVII:794262-794571 3.7e-12 55_[+2]_17 chrXII:214794-215090 3.7e-12 30_[-2]_42 chrI:166143-166471 3.7e-12 14_[+2]_58 chrV:311885-312252 3.7e-12 44_[-2]_28 chrXIV:374739-374998 5.4e-12 55_[+2]_17 chrIV:1095266-1095618 5.4e-12 36_[-2]_36 chrVIII:358397-358730 6.5e-12 23_[-2]_49 chrXIII:352123-352421 6.5e-12 62_[+2]_10 chrVIII:237742-238081 6.5e-12 45_[-2]_27 chrVII:440625-440964 6.5e-12 30_[-2]_42 chrXVI:560082-560440 6.5e-12 45_[-2]_27 chrVI:157859-158170 6.5e-12 10_[-2]_62 chrII:36249-36560 6.5e-12 48_[+2]_24 chrXVI:622448-622803 6.5e-12 23_[-2]_49 chrIII:82428-82593 9e-10 40_[-2]_32 chrV:487245-487520 9e-10 37_[-2]_35 chrIX:370260-370568 9e-10 57_[+2]_15 chrV:354777-355076 9e-10 62_[+2]_10 chrXI:140920-141247 9e-10 23_[-2]_49 chrXIII:290662-290958 9e-10 45_[+2]_27 chrX:115841-116179 9e-10 17_[-2]_55 chrVII:541703-542075 9e-10 15_[+2]_57 chrII:645017-645334 9e-10 46_[+2]_26 chrV:176952-177291 9e-10 32_[+2]_40 chrXVI:210095-210424 9e-10 21_[-2]_51 chrXII:797010-797349 9e-10 53_[+2]_19 chrIV:884228-884582 3.1e-09 10_[+2]_62 chrXII:605187-605577 3.1e-09 67_[-2]_5 chrIV:802634-802873 4.2e-09 66_[-2]_6 chrII:350692-350966 4.2e-09 52_[+2]_20 chrV:131011-131314 4.2e-09 8_[-2]_64 chrIV:520810-521147 4.2e-09 48_[+2]_24 chrVIII:134161-134499 4.2e-09 45_[+2]_27 chrIII:168205-168550 4.2e-09 12_[-2]_60 chrXII:448505-448868 4.2e-09 52_[-2]_20 chrXIII:808140-808468 4.2e-09 30_[-2]_42 chrIX:197446-197749 6.9e-09 49_[+2]_23 chrIV:1017077-1017447 6.9e-09 33_[-2]_39 chrXV:976348-976593 1e-08 5_[+2]_67 chrXIII:572749-573113 1e-08 41_[-2]_31 chrX:422782-423099 1e-08 51_[+2]_21 chrX:390942-391285 1e-08 19_[-2]_53 chrIV:1175673-1176010 1e-08 42_[+2]_30 chrVIII:475579-475919 3.1e-08 46_[-2]_26 chrIV:1075366-1075708 3.1e-08 24_[-2]_48 chrVII:878601-878972 3.9e-08 47_[-2]_25 chrXI:302752-303129 3.9e-08 31_[+2]_41 chrVII:287249-287614 3.9e-08 42_[-2]_30 chrXIII:379233-379568 3.9e-08 26_[-2]_46 chrX:415847-416208 3.9e-08 27_[-2]_45 chrX:517724-518035 5.3e-08 23_[-2]_49 chrXV:710053-710338 5.3e-08 59_[+2]_13 chrXVI:338763-339079 5.3e-08 16_[-2]_56 chrIII:149768-150090 5.3e-08 44_[+2]_28 chrV:99968-100299 5.3e-08 53_[+2]_19 chrXV:110861-111127 7.1e-08 56_[-2]_16 chrVII:779452-779761 7.1e-08 64_[+2]_8 chrXIV:96127-96458 7.1e-08 37_[-2]_35 chrXI:46680-46952 8.8e-08 8_[-2]_64 chrVIII:466894-467122 1.2e-07 35_[+2]_37 chrVII:1004085-1004394 1.2e-07 30_[+2]_42 chrXVI:744132-744458 1.2e-07 42_[+2]_30 chrVII:661594-661924 1.2e-07 43_[+2]_29 chrX:538435-538713 1.3e-07 34_[+2]_38 chrXII:818488-818773 3.5e-07 33_[+2]_39 chrVIII:62620-62923 5.3e-07 38_[+2]_34 chrXIII:362928-363227 5.3e-07 41_[+2]_31 chrX:374320-374734 7.9e-07 68_[-2]_4 chrVII:828529-828958 7.9e-07 69_[-2]_3 chrXII:92476-92718 4.3e-06 4_[+2]_68 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BWTAGBKYARTKGGTAKMRCGTHHSRCT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF BWTAGBKYARTKGGTAKMRCGTHHSRCT width=28 seqs=87 chrXV:438490-438847 ( 30) GTTAGCTCAGTTGGTAGAGCGTTCGGCT 1 chrIV:359423-359756 ( 43) GTTAGCTCAGTTGGTAGAGCGTTCGGCT 1 chrXII:875229-875576 ( 29) GTTAGCTCAGTTGGTAGAGCGTTCGGCT 1 chrXI:578805-579223 ( 6) GTTAGCTCAGTTGGTAGAGCGTTCGGCT 1 chrVII:115345-115690 ( 26) GTTAGCTCAGTTGGTAGAGCGTTCGGCT 1 chrXVI:769106-769483 ( 26) GTTAGCTCAGTTGGTAGAGCGTTCGGCT 1 chrIV:1352395-1352661 ( 28) GTTGGCGCAATCGGTAGCGCGTATGACT 1 chrVII:185597-185919 ( 46) GTTGGCGCAATCGGTAGCGCGTATGACT 1 chrV:435660-435947 ( 39) GTTGGCGCAATCGGTAGCGCGTATGACT 1 chrVI:226583-226872 ( 51) GTTGGCGCAATCGGTAGCGCGTATGACT 1 chrIV:1201613-1201912 ( 43) GTTGGCGCAATCGGTAGCGCGTATGACT 1 chrXIII:480531-480839 ( 26) GTTGGCGCAATCGGTAGCGCGTATGACT 1 chrVII:876237-876551 ( 55) GTTGGCGCAATCGGTAGCGCGTATGACT 1 chrV:135300-135621 ( 55) GTTGGCGCAATCGGTAGCGCGTATGACT 1 chrVII:122117-122470 ( 31) GTTGGCGCAATCGGTAGCGCGTATGACT 1 chrIX:300137-300462 ( 19) GTTGGCGCAATCGGTAGCGCGTATGACT 1 chrX:414816-415154 ( 36) GTTGGCGCAATCGGTAGCGCGTATGACT 1 chrVII:794262-794571 ( 56) CATGGCGCAGTTGGTAGCGCGCTTCCCT 1 chrXII:214794-215090 ( 31) CATGGCGCAGTTGGTAGCGCGCTTCCCT 1 chrI:166143-166471 ( 15) CATGGCGCAGTTGGTAGCGCGCTTCCCT 1 chrV:311885-312252 ( 45) CATGGCGCAGTTGGTAGCGCGCTTCCCT 1 chrXIV:374739-374998 ( 56) CTTAGCTCAGTTGGGAGAGCGCCAGACT 1 chrIV:1095266-1095618 ( 37) CTTAGCTCAGTTGGGAGAGCGCCAGACT 1 chrVIII:358397-358730 ( 24) TTTAGCTCAGTTGGGAGAGCGCCAGACT 1 chrXIII:352123-352421 ( 63) TTTAGCTCAGTTGGGAGAGCGCCAGACT 1 chrVIII:237742-238081 ( 46) TTTAGCTCAGTTGGGAGAGCGCCAGACT 1 chrVII:440625-440964 ( 31) TTTAGCTCAGTTGGGAGAGCGCCAGACT 1 chrXVI:560082-560440 ( 46) TTTAGCTCAGTTGGGAGAGCGCCAGACT 1 chrVI:157859-158170 ( 11) TTTAGCTCAGTTGGGAGAGCGCCAGACT 1 chrII:36249-36560 ( 49) TTTAGCTCAGTTGGGAGAGCGCCAGACT 1 chrXVI:622448-622803 ( 24) TTTAGCTCAGTTGGGAGAGCGCCAGACT 1 chrIII:82428-82593 ( 41) TATAGTGTAACGGCTATCACATCACGCT 1 chrV:487245-487520 ( 38) TATAGTGTAACGGCTATCACATCACGCT 1 chrIX:370260-370568 ( 58) TATAGTGTAACGGCTATCACATCACGCT 1 chrV:354777-355076 ( 63) TATAGTGTAACGGCTATCACATCACGCT 1 chrXI:140920-141247 ( 24) TATAGTGTAACGGCTATCACATCACGCT 1 chrXIII:290662-290958 ( 46) TATAGTGTAACGGCTATCACATCACGCT 1 chrX:115841-116179 ( 18) TATAGTGTAACGGCTATCACATCACGCT 1 chrVII:541703-542075 ( 16) TATAGTGTAACGGCTATCACATCACGCT 1 chrII:645017-645334 ( 47) TATAGTGTAACGGCTATCACATCACGCT 1 chrV:176952-177291 ( 33) TATAGTGTAACGGCTATCACATCACGCT 1 chrXVI:210095-210424 ( 22) TATAGTGTAACGGCTATCACATCACGCT 1 chrXII:797010-797349 ( 54) TATAGTGTAACGGCTATCACATCACGCT 1 chrIV:884228-884582 ( 11) TGTAGCTCAGTGGTTAGAGCTTCGTGCT 1 chrXII:605187-605577 ( 68) TGTAGCTCAGTGGTTAGAGCTTCGTGCT 1 chrIV:802634-802873 ( 67) TATAGTGTAGTGGTTATCACTTTCGGTT 1 chrII:350692-350966 ( 53) TATAGTGTAGTGGTTATCACTTTCGGTT 1 chrV:131011-131314 ( 9) TATAGTGTAGTGGTTATCACTTTCGGTT 1 chrIV:520810-521147 ( 49) TATAGTGTAGTGGTTATCACTTTCGGTT 1 chrVIII:134161-134499 ( 46) TATAGTGTAGTGGTTATCACTTTCGGTT 1 chrIII:168205-168550 ( 13) TATAGTGTAGTGGTTATCACTTTCGGTT 1 chrXII:448505-448868 ( 53) TATAGTGTAGTGGTTATCACTTTCGGTT 1 chrXIII:808140-808468 ( 31) TATAGTGTAGTGGTTATCACTTTCGGTT 1 chrIX:197446-197749 ( 50) TGTAGTGTAACGGCTATCACATCACGTT 1 chrIV:1017077-1017447 ( 34) TGTAGTGTAACGGCTATCACATCACGTT 1 chrXV:976348-976593 ( 6) AGTAGCTCAGTAGGAAGAGCGTCAGTCT 1 chrXIII:572749-573113 ( 42) AGTAGCTCAGTAGGAAGAGCGTCAGTCT 1 chrX:422782-423099 ( 52) AGTAGCTCAGTAGGAAGAGCGTCAGTCT 1 chrX:390942-391285 ( 20) AGTAGCTCAGTAGGAAGAGCGTCAGTCT 1 chrIV:1175673-1176010 ( 43) AGTAGCTCAGTAGGAAGAGCGTCAGTCT 1 chrVIII:475579-475919 ( 47) AATAGTGTAGCGGCTATCACGTTGCCTT 1 chrIV:1075366-1075708 ( 25) AATAGTGTAGCGGCTATCACGTTGCCTT 1 chrVII:878601-878972 ( 48) CGGTGGCTCAATGGTAGAGCTTTCGACT 1 chrXI:302752-303129 ( 32) CGGTGGCTCAATGGTAGAGCTTTCGACT 1 chrVII:287249-287614 ( 43) CGGTGGCTCAATGGTAGAGCTTTCGACT 1 chrXIII:379233-379568 ( 27) CGGTGGCTCAATGGTAGAGCTTTCGACT 1 chrX:415847-416208 ( 28) CGGTGGCTCAATGGTAGAGCTTTCGACT 1 chrX:517724-518035 ( 24) CCGTGGCGCAGTGGAAGCGCGCAGGGCT 1 chrXV:710053-710338 ( 60) CCGTGGCGCAGTGGAAGCGCGCAGGGCT 1 chrXVI:338763-339079 ( 17) CCGTGGCGCAGTGGAAGCGCGCAGGGCT 1 chrIII:149768-150090 ( 45) CCGTGGCGCAGTGGAAGCGCGCAGGGCT 1 chrV:99968-100299 ( 54) CCGTGGCGCAGTGGAAGCGCGCAGGGCT 1 chrXV:110861-111127 ( 57) GTTAGTGTAGTGGTTATCATCCCACCCT 1 chrVII:779452-779761 ( 65) GTTAGTGTAGTGGTTATCATCCCACCCT 1 chrXIV:96127-96458 ( 38) GTTAGTGTAGTGGTTATCATCCCACCCT 1 chrXI:46680-46952 ( 9) TTTTGGCCAAGTGGTAAGGCATCGCACT 1 chrVIII:466894-467122 ( 36) CCTTAGCTTAGTGGTAGAGCGTTGCACT 1 chrVII:1004085-1004394 ( 31) CCTTAGCTTAGTGGTAGAGCGTTGCACT 1 chrXVI:744132-744458 ( 43) CCTTAGCTTAGTGGTAGAGCGTTGCACT 1 chrVII:661594-661924 ( 44) CCTTAGCTTAGTGGTAGAGCGTTGCACT 1 chrX:538435-538713 ( 35) CGTTGGCGTAATGGTAACGCGTCTCCCT 1 chrXII:818488-818773 ( 34) TCTAGTGCAATGGTTAGCATGCATTCTT 1 chrVIII:62620-62923 ( 39) CTTAGTATAGTGGTTAGTACACATCGTT 1 chrXIII:362928-363227 ( 42) CTTAGTATAGTGGTTAGTACACATCGTT 1 chrX:374320-374734 ( 69) GCGTGGCGTAATGGCAACGCGTCTGACT 1 chrVII:828529-828958 ( 70) GCGTGGCGTAATGGCAACGCGTCTGACT 1 chrXII:92476-92718 ( 5) GTGTGGTCTAGTGGTATGATTCTCGCTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BWTAGBKYARTKGGTAKMRCGTHHSRCT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 28 n= 38083 bayes= 9.78896 E= 3.7e-314 -192 44 44 36 -3 -50 -17 36 -1309 -1309 -38 148 100 -1309 -17 -48 -273 -1309 229 -1309 -1309 117 17 18 -373 9 134 -15 -1309 128 -108 52 138 -76 -1309 -173 76 -1309 131 -1309 -173 -8 -62 97 -241 -62 92 55 -1309 -1309 236 -1309 -1309 -8 170 -73 -141 -308 -76 129 171 -1309 -1309 -1309 -273 -1309 170 8 27 159 -308 -373 22 -1309 173 -1309 -1309 228 -1309 -241 -64 -250 159 -73 -1309 62 -1309 120 -48 117 -1309 18 27 24 -27 -34 -1309 87 165 -315 31 -50 113 -241 -1309 207 -1309 -73 -1309 -1309 -1309 171 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BWTAGBKYARTKGGTAKMRCGTHHSRCT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 28 nsites= 87 E= 3.7e-314 0.080460 0.264368 0.264368 0.390805 0.298851 0.137931 0.172414 0.390805 0.000000 0.000000 0.149425 0.850575 0.609195 0.000000 0.172414 0.218391 0.045977 0.000000 0.954023 0.000000 0.000000 0.436782 0.218391 0.344828 0.022989 0.206897 0.494253 0.275862 0.000000 0.471264 0.091954 0.436782 0.793103 0.114943 0.000000 0.091954 0.517241 0.000000 0.482759 0.000000 0.091954 0.183908 0.126437 0.597701 0.057471 0.126437 0.367816 0.448276 0.000000 0.000000 1.000000 0.000000 0.000000 0.183908 0.632184 0.183908 0.114943 0.022989 0.114943 0.747126 1.000000 0.000000 0.000000 0.000000 0.045977 0.000000 0.632184 0.321839 0.367816 0.586207 0.022989 0.022989 0.356322 0.000000 0.643678 0.000000 0.000000 0.942529 0.000000 0.057471 0.195402 0.034483 0.586207 0.183908 0.000000 0.298851 0.000000 0.701149 0.218391 0.436782 0.000000 0.344828 0.367816 0.229885 0.160920 0.241379 0.000000 0.356322 0.609195 0.034483 0.379310 0.137931 0.425287 0.057471 0.000000 0.816092 0.000000 0.183908 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BWTAGBKYARTKGGTAKMRCGTHHSRCT MEME-2 regular expression -------------------------------------------------------------------------------- [TCG][TA]T[AT]G[CTG][GTC][CT]A[AG]T[TG]GGTA[GT][CA][GA]CG[TC][CTA][ATC][GC][GA]CT -------------------------------------------------------------------------------- Time 493.98 secs. ******************************************************************************** ******************************************************************************** MOTIF TCGAACCSVKGAYCTYHYGAT MEME-3 width = 21 sites = 114 llr = 1787 E-value = 1.8e-341 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCGAACCSVKGAYCTYHYGAT MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::aa::13127:::132:51 pos.-specific C :8:::a7532::673544321 probability G ::a::::44481:1::12721 matrix T a2::::2::3:2417433::7 bits 2.4 * * 2.1 * * 1.9 * * 1.7 * **** Relative 1.4 ****** * * Entropy 1.2 ******* * ** * (22.6 bits) 0.9 ******* * *** * 0.7 ******** * **** * * 0.5 **************** *** 0.2 ********************* 0.0 --------------------- Multilevel TCGAACCCGGGACCTCCCGAT consensus T TGATA T CTATCC sequence C T G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCGAACCSVKGAYCTYHYGAT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXIV:631763-632042 + 9 1.97e-11 GCCGGGAC TCGAACCCGGGACCTCCCGCA CCCTAAGCGA chrIII:123446-123793 + 23 1.97e-11 GAGCCGGGAC TCGAACCCGGGACCTCCCGCA CCCTAAGCGA chrXII:214794-215090 + 6 1.60e-09 CGGAA TCGAACCGATGACCTCTTCCT TGCAAGGGAA chrI:166143-166471 - 47 1.60e-09 GCAACCGGAA TCGAACCGATGACCTCTTCCT TGCAAGGGAA chrV:311885-312252 + 20 1.60e-09 GCAACCGGAA TCGAACCGATGACCTCTTCCT TGCAAGGGAA chrIV:667901-668100 + 72 1.86e-09 TCTAGCGGGA TCGAACCGCTGATCCCCGCGT TATTAGCA chrXIV:569782-569978 + 52 1.86e-09 TCTAGCGGGA TCGAACCGCTGATCCCCGCGT TATTAGCACG chrXIV:602240-602482 - 39 1.86e-09 TCTAGCGGGA TCGAACCGCTGATCCCCGCGT TATTAGCACG chrV:443134-443380 + 10 1.86e-09 CTAGCGGGA TCGAACCGCTGATCCCCGCGT TATTAGCACG chrV:551201-551479 + 10 1.86e-09 CTAGCGGGA TCGAACCGCTGATCCCCGCGT TATTAGCACG chrIX:183325-183663 + 11 1.86e-09 TCTAGCGGGA TCGAACCGCTGATCCCCGCGT TATTAGCACG chrVII:738975-739302 - 72 1.86e-09 TAGCGGGA TCGAACCGCTGATCCCCGCGT TATTAGCACG chrX:531705-532005 - 58 2.16e-09 AAGCCCGGAA TCGAACCGGGGGCCCAACGAT GGCAACGTTG chrXVI:572113-572481 - 57 2.16e-09 AAGCCCGGAA TCGAACCGGGGGCCCAACGAT GGCAACGTTG chrIV:992678-993007 - 75 2.16e-09 CGGAA TCGAACCGGGGGCCCAACGAT GGCAACGTTG chrVI:180864-181200 + 7 2.16e-09 CCGGAA TCGAACCGGGGGCCCAACGAT GGCAACGTTG chrVII:845491-845823 - 77 2.16e-09 GAA TCGAACCGGGGGCCCAACGAT GGCAACGTTG chrV:61767-62093 + 25 2.16e-09 AAGCCCGGAA TCGAACCGGGGGCCCAACGAT GGCAACGTTG chrIV:645077-645249 + 55 2.50e-09 CTACCCGGAT TCGAACCGGGGTTGTCCGGAT CAAAACCGAA chrIV:802634-802873 + 43 2.50e-09 CTACCCGGAT TCGAACCGGGGTTGTCCGGAT CAAAACCGAA chrIV:520810-521147 - 80 2.50e-09 . TCGAACCGGGGTTGTCCGGAT CAAAACCGAA chrVIII:134161-134499 - 77 2.50e-09 GAT TCGAACCGGGGTTGTCCGGAT CAAAACCGAA chrXII:448505-448868 + 29 2.50e-09 CTACCCGGAT TCGAACCGGGGTTGTCCGGAT CAAAACCGAA chrIV:1352395-1352661 + 3 3.33e-09 GC TCGAACCCCTAACCTTATGAT TAAGAGTCAT chrVII:185597-185919 + 21 3.33e-09 TGTAGGGGGC TCGAACCCCTAACCTTATGAT TAAGAGTCAT chrV:435660-435947 + 14 3.33e-09 TGTAGGGGGC TCGAACCCCTAACCTTATGAT TAAGAGTCAT chrVI:226583-226872 + 26 3.33e-09 TGTAGGGGGC TCGAACCCCTAACCTTATGAT TAAGAGTCAT chrIV:1201613-1201912 - 75 3.33e-09 GGGGC TCGAACCCCTAACCTTATGAT TAAGAGTCAT chrXIII:480531-480839 + 1 3.33e-09 . TCGAACCCCTAACCTTATGAT TAAGAGTCAT chrV:135300-135621 + 30 3.33e-09 TGTAGGGGGC TCGAACCCCTAACCTTATGAT TAAGAGTCAT chrVII:122117-122470 - 63 3.33e-09 TGTAGGGGGC TCGAACCCCTAACCTTATGAT TAAGAGTCAT chrX:414816-415154 - 68 3.33e-09 TGTAGGGGGC TCGAACCCCTAACCTTATGAT TAAGAGTCAT chrVII:405411-405668 - 17 3.82e-09 ACGATGGGGG TCGAACCCATAATCTTCTGAT TAGAAGTCAG chrIV:568742-569146 - 24 3.82e-09 ACGATGGGGG TCGAACCCATAATCTTCTGAT TAGAAGTCAG chrX:374320-374734 + 44 3.82e-09 ACGATGGGGG TCGAACCCATAATCTTCTGAT TAGAAGTCAG chrXI:162366-162703 + 18 3.82e-09 ACGATGGGGG TCGAACCCATAATCTTCTGAT TAGAAGTCAG chrVII:828529-828958 + 45 3.82e-09 ACGATGGGGG TCGAACCCATAATCTTCTGAT TAGAAGTCAG chrX:355203-355655 - 31 3.82e-09 ACGATGGGGG TCGAACCCATAATCTTCTGAT TAGAAGTCAG chrXIII:131725-132051 + 2 3.82e-09 G TCGAACCCATAATCTTCTGAT TAGAAGTCAG chrII:405719-406149 - 30 3.82e-09 ACGATGGGGG TCGAACCCATAATCTTCTGAT TAGAAGTCAG chrV:138501-138895 - 54 3.82e-09 ACGATGGGGG TCGAACCCATAATCTTCTGAT TAGAAGTCAG chrIII:82428-82593 + 17 5.74e-09 ATACGGGGAG TCGAACCCCGGTCTCCACGGT GAAAGCGTGA chrV:487245-487520 + 14 5.74e-09 ATACGGGGAG TCGAACCCCGGTCTCCACGGT GAAAGCGTGA chrXIII:290662-290958 - 77 5.74e-09 GAG TCGAACCCCGGTCTCCACGGT GAAAGCGTGA chrVII:541703-542075 - 47 5.74e-09 ATACGGGGAG TCGAACCCCGGTCTCCACGGT GAAAGCGTGA chrVII:328453-328837 - 24 5.74e-09 ATACGGGGAG TCGAACCCCGGTCTCCACGGT GAAAGCGTGA chrII:645017-645334 - 78 5.74e-09 AG TCGAACCCCGGTCTCCACGGT GAAAGCGTGA chrV:176952-177291 - 64 5.74e-09 ATACGGGGAG TCGAACCCCGGTCTCCACGGT GAAAGCGTGA chrIV:1017077-1017447 + 10 5.74e-09 AGCGGGGAG TCGAACCCCGGTCTCCACGGT GAGAACGTGA chrVIII:237742-238081 + 2 9.60e-09 A TCGAACACAGGACCTCCAGAT AACTTGACCG chrXVI:560082-560440 + 2 9.60e-09 A TCGAACACAGGACCTCCAGAT AACTTGACCG chrIX:174945-175159 - 66 1.39e-08 CCAATCGGAT TTGAACCGATGATCTCCACAT TACTAGTGTG chrXIV:560593-560831 + 46 1.39e-08 CCAATCGGAT TTGAACCGATGATCTCCACAT TACTAGTGTG chrIII:295338-295682 - 61 1.39e-08 CCAATCGGAT TTGAACCGATGATCTCCACAT TACTAGTGTG chrIV:434156-434446 + 28 1.39e-08 CCAATCGGAT TTGAACCGATGATCTCCACAT TACTAGTGTG chrXIV:104667-105031 - 43 1.39e-08 CCAATCGGAT TTGAACCGATGATCTCCACAT TACTAGTGTG chrII:266220-266592 - 59 1.39e-08 CCAATCGGAT TTGAACCGATGATCTCCACAT TACTAGTGTG chrIX:325602-325916 - 76 1.39e-08 GGAT TTGAACCGATGATCTCCACAT TACTAGTGTG chrXIII:768279-768458 + 66 1.97e-08 GAGTCCGGAA TCGAACCGGAGACCTCTCCCA TGCTAAGGGA chrVI:101363-101564 - 30 1.97e-08 GAGCTGGGAA TTGAACCCAGGGCCTCTCGCA TGCTTTGTCT chrVIII:146143-146329 + 71 1.97e-08 GAGTCCGGAA TCGAACCGGAGACCTCTCCCA TGCTAAGGG chrXII:92476-92718 - 68 1.97e-08 GAGCTGGGAA TTGAACCCAGGGCCTCTCGCA TGCTTTGTCT chrXVI:856877-857100 - 1 1.97e-08 GAGTCCGGAA TCGAACCGGAGACCTCTCCCA chrXIV:547053-547323 - 23 1.97e-08 GAGCTGGGAA TTGAACCCAGGGCCTCTCGCA TGCTTTGTCT chrXV:464355-464635 - 71 1.97e-08 AGCTGGGAA TTGAACCCAGGGCCTCTCGCA TGCTTTGTCT chrXV:980574-980872 - 79 1.97e-08 A TTGAACCCAGGGCCTCTCGCA TGCTTTGTTC chrXII:656847-657137 + 7 1.97e-08 CCGGAA TCGAACCGGAGACCTCTCCCA TGCTAAGGGA chrXIII:321048-321354 + 11 1.97e-08 GAGTCCGGAA TCGAACCGGAGACCTCTCCCA TGCTAAGGGA chrXIV:567993-568331 - 70 1.97e-08 GAGCTGGGAA TTGAACCCAGGGCCTCTCGCA TGCTTTGTCT chrX:197219-197534 + 2 1.97e-08 A TCGAACCGGAGACCTCTCCCA TGCTAAGGGA chrVII:774177-774570 - 63 1.97e-08 GAGTCCGGAA TCGAACCGGAGACCTCTCCCA TGCTAAGGGA chrIV:488582-489007 + 68 2.47e-08 CAACCGAGGT TCGAACTCGGGATCTTCGCCG TGTAAAGGCG chrXI:578805-579223 - 61 2.47e-08 CATAGGGGGC TCGAACCCCTGACATTTCGGT ATCCTTGCTT chrVIII:475579-475919 + 22 3.09e-08 CAACCGAGGA TCGAACTCGGGACCTTTGCCG TGTGAAGGCA chrXV:110861-111127 + 33 3.44e-08 GGTACGAGAA TCGAACCCGTGTCCCCACCTT GGAAGGGTGG chrXIV:96127-96458 + 14 3.44e-08 GGTACGAGAA TCGAACCCGTGTCCCCACCTT GGAAGGGTGG chrXIII:168703-168997 - 48 3.83e-08 CGGGGGCGAG TCGAACGCCCGATCTCAAGAT TTCGTAGTGA chrX:354136-354436 - 61 3.83e-08 CGGGGGCGAG TCGAACGCCCGATCTCAAGAT TTCGTAGTGG chrVI:167305-167619 - 78 3.83e-08 AG TCGAACGCCCGATCTCAAGAT TTCGTAGTGA chrX:542822-543204 + 8 3.83e-08 GGGCGAG TCGAACGCCCGATCTCAAGAT TTCGTAGTGA chrXIII:808140-808468 + 7 3.83e-08 CCGGAT TCGAACTGGGGTTGTTCGGAT CAGAACCGAA chrX:538435-538713 - 67 4.72e-08 CGTACGGGAC TCGAACCCGCAGTCTTCTCCT TAGGAGGGAG chrV:438569-438854 - 77 5.23e-08 GGA TCGAACTGGGGACGTTCTGCG TGTTAAGCAG chrXV:663708-664018 + 14 5.23e-08 TCGCCCAGGA TCGAACTGGGGACGTTCTGCG TGTTAAGCAG chrXIII:372360-372643 + 9 5.23e-08 GCCCAGGA TCGAACTGGGGACGTTCTGCG TGTTAAGCAG chrXIII:420480-420808 + 9 5.23e-08 GCCCAGGA TCGAACTGGGGACGTTCTGCG TGTTAAGCAG chrVII:412166-412523 + 15 5.23e-08 TCGCCCAGGA TCGAACTGGGGACGTTCTGCG TGTTAAGCAG chrVII:823349-823668 - 62 5.23e-08 TCGCCCAGGA TCGAACTGGGGACGTTCTGCG TGTTAAGCAG chrXV:976348-976593 - 38 6.40e-08 CAGGGGAGGT TCGAACTCTCGACCTTCAGAT TATGAGACTG chrXIII:572749-573113 + 17 6.40e-08 CAGGGGAGGT TCGAACTCTCGACCTTCAGAT TATGAGACTG chrIV:1175673-1176010 - 75 6.40e-08 GAGGT TCGAACTCTCGACCTTCAGAT TATGAGACTG chrXII:975837-976108 + 76 1.25e-07 CCAGTGAGGG TTGAACTCACGATCTTGCGAT TAAC chrXI:74476-74790 - 79 1.25e-07 G TTGAACTCACGATCTTGCGAT TAACAGTCGC chrXIV:632465-632775 - 67 1.25e-07 CCAGTGAGGG TTGAACTCACGATCTTGCGAT TAACAGTCGC chrVI:137355-137699 + 24 1.25e-07 CCAGTGAGGG TTGAACTCACGATCTTGCGAT TAACAGTCGC chrVII:730982-731329 - 70 1.25e-07 CCAGTGAGGG TTGAACTCACGATCTTGCGAT TAACAGTCGC chrV:492243-492441 + 75 2.11e-07 CCGCCAGGAC TTGAACCTGGAATCTTCTGGT TCGTA chrIV:619853-620190 + 13 2.11e-07 CCGCCAGGAC TTGAACCTGGAATCTTCTGGT TCGTAGCCAG chrXV:340082-340519 + 64 2.11e-07 CCGCCAGGAC TTGAACCTGGAATCTTCTGGT TCGTAGCCAG chrVIII:466894-467122 - 68 3.18e-07 CCTGCCAGAA TTGAACTAGCGACCTTTGCAT TACAAGTGCA chrXVI:56035-56372 + 31 3.44e-07 CGGACAGGAA TTGAACCTGCAACCCTTCGAT TGCAATCTTA chrVII:1004085-1004394 - 63 4.67e-07 CCTGTCAGAA TTGAACTAACGACCTTTGCAT TACAAGTGCA chrXVI:744132-744458 - 75 4.67e-07 CAGAA TTGAACTAACGACCTTTGCAT TACAAGTGCA chrVII:661594-661924 - 76 4.67e-07 AGAA TTGAACTAACGACCTTTGCAT TACAAGTGCA chrVII:706994-707216 + 68 7.72e-07 GCACTCAGGA TCGAACTAAGGACCAACAGAT TTGCAATCTG chrXVI:435786-436129 + 1 7.72e-07 . TCGAACTAAGGACCAACAGAT TTGCAATCTG chrIII:149768-150090 - 77 8.26e-07 GTT TCGATCCGAGGACATCAGGGT TATGAGCCCT chrV:434469-434632 + 56 1.38e-06 TCTCCTAGAA TCGAACCAGGGTTTCATCGGC CACAACGATG chrVII:319737-319978 - 10 1.38e-06 TCTCCTAGAA TCGAACCAGGGTTTCATCGGC CACAACGAT chrVII:110438-110800 + 71 1.38e-06 TCTCCTAGAA TCGAACCAGGGTTTCATCGGC CACAACGAT chrVIII:62620-62923 - 70 1.38e-06 TCTCCTAGAA TCGAACCAGGGTTTCATCGGC CACAACGATG chrXIII:362928-363227 - 73 1.38e-06 CCTAGAA TCGAACCAGGGTTTCATCGGC CACAACGATG chrXV:594269-594568 + 1 3.21e-06 . TCGAACCCGGGCCTCATGCTT GGGAAGCATA chrXII:818488-818773 - 65 3.73e-06 CTCCCGGGAC TCGAACCCGGATCACAGCCAC CGGAAGAATG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCGAACCSVKGAYCTYHYGAT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:631763-632042 2e-11 8_[+3]_71 chrIII:123446-123793 2e-11 22_[+3]_57 chrXII:214794-215090 1.6e-09 5_[+3]_74 chrI:166143-166471 1.6e-09 46_[-3]_33 chrV:311885-312252 1.6e-09 19_[+3]_60 chrIV:667901-668100 1.9e-09 71_[+3]_8 chrXIV:569782-569978 1.9e-09 51_[+3]_28 chrXIV:602240-602482 1.9e-09 38_[-3]_41 chrV:443134-443380 1.9e-09 9_[+3]_70 chrV:551201-551479 1.9e-09 9_[+3]_70 chrIX:183325-183663 1.9e-09 10_[+3]_69 chrVII:738975-739302 1.9e-09 71_[-3]_8 chrX:531705-532005 2.2e-09 57_[-3]_22 chrXVI:572113-572481 2.2e-09 56_[-3]_23 chrIV:992678-993007 2.2e-09 74_[-3]_5 chrVI:180864-181200 2.2e-09 6_[+3]_73 chrVII:845491-845823 2.2e-09 76_[-3]_3 chrV:61767-62093 2.2e-09 24_[+3]_55 chrIV:645077-645249 2.5e-09 54_[+3]_25 chrIV:802634-802873 2.5e-09 42_[+3]_37 chrIV:520810-521147 2.5e-09 79_[-3] chrVIII:134161-134499 2.5e-09 76_[-3]_3 chrXII:448505-448868 2.5e-09 28_[+3]_51 chrIV:1352395-1352661 3.3e-09 2_[+3]_77 chrVII:185597-185919 3.3e-09 20_[+3]_59 chrV:435660-435947 3.3e-09 13_[+3]_66 chrVI:226583-226872 3.3e-09 25_[+3]_54 chrIV:1201613-1201912 3.3e-09 74_[-3]_5 chrXIII:480531-480839 3.3e-09 [+3]_79 chrV:135300-135621 3.3e-09 29_[+3]_50 chrVII:122117-122470 3.3e-09 62_[-3]_17 chrX:414816-415154 3.3e-09 67_[-3]_12 chrVII:405411-405668 3.8e-09 16_[-3]_63 chrIV:568742-569146 3.8e-09 23_[-3]_56 chrX:374320-374734 3.8e-09 43_[+3]_36 chrXI:162366-162703 3.8e-09 17_[+3]_62 chrVII:828529-828958 3.8e-09 44_[+3]_35 chrX:355203-355655 3.8e-09 30_[-3]_49 chrXIII:131725-132051 3.8e-09 1_[+3]_78 chrII:405719-406149 3.8e-09 29_[-3]_50 chrV:138501-138895 3.8e-09 53_[-3]_26 chrIII:82428-82593 5.7e-09 16_[+3]_63 chrV:487245-487520 5.7e-09 13_[+3]_66 chrXIII:290662-290958 5.7e-09 76_[-3]_3 chrVII:541703-542075 5.7e-09 46_[-3]_33 chrVII:328453-328837 5.7e-09 23_[-3]_56 chrII:645017-645334 5.7e-09 77_[-3]_2 chrV:176952-177291 5.7e-09 63_[-3]_16 chrIV:1017077-1017447 5.7e-09 9_[+3]_70 chrVIII:237742-238081 9.6e-09 1_[+3]_78 chrXVI:560082-560440 9.6e-09 1_[+3]_78 chrIX:174945-175159 1.4e-08 65_[-3]_14 chrXIV:560593-560831 1.4e-08 45_[+3]_34 chrIII:295338-295682 1.4e-08 60_[-3]_19 chrIV:434156-434446 1.4e-08 27_[+3]_52 chrXIV:104667-105031 1.4e-08 42_[-3]_37 chrII:266220-266592 1.4e-08 58_[-3]_21 chrIX:325602-325916 1.4e-08 75_[-3]_4 chrXIII:768279-768458 2e-08 65_[+3]_14 chrVI:101363-101564 2e-08 29_[-3]_50 chrVIII:146143-146329 2e-08 70_[+3]_9 chrXII:92476-92718 2e-08 67_[-3]_12 chrXVI:856877-857100 2e-08 [-3]_79 chrXIV:547053-547323 2e-08 22_[-3]_57 chrXV:464355-464635 2e-08 70_[-3]_9 chrXV:980574-980872 2e-08 78_[-3]_1 chrXII:656847-657137 2e-08 6_[+3]_73 chrXIII:321048-321354 2e-08 10_[+3]_69 chrXIV:567993-568331 2e-08 69_[-3]_10 chrX:197219-197534 2e-08 1_[+3]_78 chrVII:774177-774570 2e-08 62_[-3]_17 chrIV:488582-489007 2.5e-08 67_[+3]_12 chrXI:578805-579223 2.5e-08 60_[-3]_19 chrVIII:475579-475919 3.1e-08 21_[+3]_58 chrXV:110861-111127 3.4e-08 32_[+3]_47 chrXIV:96127-96458 3.4e-08 13_[+3]_66 chrXIII:168703-168997 3.8e-08 47_[-3]_32 chrX:354136-354436 3.8e-08 60_[-3]_19 chrVI:167305-167619 3.8e-08 77_[-3]_2 chrX:542822-543204 3.8e-08 7_[+3]_72 chrXIII:808140-808468 3.8e-08 6_[+3]_73 chrX:538435-538713 4.7e-08 66_[-3]_13 chrV:438569-438854 5.2e-08 76_[-3]_3 chrXV:663708-664018 5.2e-08 13_[+3]_66 chrXIII:372360-372643 5.2e-08 8_[+3]_71 chrXIII:420480-420808 5.2e-08 8_[+3]_71 chrVII:412166-412523 5.2e-08 14_[+3]_65 chrVII:823349-823668 5.2e-08 61_[-3]_18 chrXV:976348-976593 6.4e-08 37_[-3]_42 chrXIII:572749-573113 6.4e-08 16_[+3]_63 chrIV:1175673-1176010 6.4e-08 74_[-3]_5 chrXII:975837-976108 1.2e-07 75_[+3]_4 chrXI:74476-74790 1.2e-07 78_[-3]_1 chrXIV:632465-632775 1.2e-07 66_[-3]_13 chrVI:137355-137699 1.2e-07 23_[+3]_56 chrVII:730982-731329 1.2e-07 69_[-3]_10 chrV:492243-492441 2.1e-07 74_[+3]_5 chrIV:619853-620190 2.1e-07 12_[+3]_67 chrXV:340082-340519 2.1e-07 63_[+3]_16 chrVIII:466894-467122 3.2e-07 67_[-3]_12 chrXVI:56035-56372 3.4e-07 30_[+3]_49 chrVII:1004085-1004394 4.7e-07 62_[-3]_17 chrXVI:744132-744458 4.7e-07 74_[-3]_5 chrVII:661594-661924 4.7e-07 75_[-3]_4 chrVII:706994-707216 7.7e-07 67_[+3]_12 chrXVI:435786-436129 7.7e-07 [+3]_79 chrIII:149768-150090 8.3e-07 76_[-3]_3 chrV:434469-434632 1.4e-06 55_[+3]_24 chrVII:319737-319978 1.4e-06 9_[-3]_70 chrVII:110438-110800 1.4e-06 70_[+3]_9 chrVIII:62620-62923 1.4e-06 69_[-3]_10 chrXIII:362928-363227 1.4e-06 72_[-3]_7 chrXV:594269-594568 3.2e-06 [+3]_79 chrXII:818488-818773 3.7e-06 64_[-3]_15 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCGAACCSVKGAYCTYHYGAT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCGAACCSVKGAYCTYHYGAT width=21 seqs=114 chrXIV:631763-632042 ( 9) TCGAACCCGGGACCTCCCGCA 1 chrIII:123446-123793 ( 23) TCGAACCCGGGACCTCCCGCA 1 chrXII:214794-215090 ( 6) TCGAACCGATGACCTCTTCCT 1 chrI:166143-166471 ( 47) TCGAACCGATGACCTCTTCCT 1 chrV:311885-312252 ( 20) TCGAACCGATGACCTCTTCCT 1 chrIV:667901-668100 ( 72) TCGAACCGCTGATCCCCGCGT 1 chrXIV:569782-569978 ( 52) TCGAACCGCTGATCCCCGCGT 1 chrXIV:602240-602482 ( 39) TCGAACCGCTGATCCCCGCGT 1 chrV:443134-443380 ( 10) TCGAACCGCTGATCCCCGCGT 1 chrV:551201-551479 ( 10) TCGAACCGCTGATCCCCGCGT 1 chrIX:183325-183663 ( 11) TCGAACCGCTGATCCCCGCGT 1 chrVII:738975-739302 ( 72) TCGAACCGCTGATCCCCGCGT 1 chrX:531705-532005 ( 58) TCGAACCGGGGGCCCAACGAT 1 chrXVI:572113-572481 ( 57) TCGAACCGGGGGCCCAACGAT 1 chrIV:992678-993007 ( 75) TCGAACCGGGGGCCCAACGAT 1 chrVI:180864-181200 ( 7) TCGAACCGGGGGCCCAACGAT 1 chrVII:845491-845823 ( 77) TCGAACCGGGGGCCCAACGAT 1 chrV:61767-62093 ( 25) TCGAACCGGGGGCCCAACGAT 1 chrIV:645077-645249 ( 55) TCGAACCGGGGTTGTCCGGAT 1 chrIV:802634-802873 ( 43) TCGAACCGGGGTTGTCCGGAT 1 chrIV:520810-521147 ( 80) TCGAACCGGGGTTGTCCGGAT 1 chrVIII:134161-134499 ( 77) TCGAACCGGGGTTGTCCGGAT 1 chrXII:448505-448868 ( 29) TCGAACCGGGGTTGTCCGGAT 1 chrIV:1352395-1352661 ( 3) TCGAACCCCTAACCTTATGAT 1 chrVII:185597-185919 ( 21) TCGAACCCCTAACCTTATGAT 1 chrV:435660-435947 ( 14) TCGAACCCCTAACCTTATGAT 1 chrVI:226583-226872 ( 26) TCGAACCCCTAACCTTATGAT 1 chrIV:1201613-1201912 ( 75) TCGAACCCCTAACCTTATGAT 1 chrXIII:480531-480839 ( 1) TCGAACCCCTAACCTTATGAT 1 chrV:135300-135621 ( 30) TCGAACCCCTAACCTTATGAT 1 chrVII:122117-122470 ( 63) TCGAACCCCTAACCTTATGAT 1 chrX:414816-415154 ( 68) TCGAACCCCTAACCTTATGAT 1 chrVII:405411-405668 ( 17) TCGAACCCATAATCTTCTGAT 1 chrIV:568742-569146 ( 24) TCGAACCCATAATCTTCTGAT 1 chrX:374320-374734 ( 44) TCGAACCCATAATCTTCTGAT 1 chrXI:162366-162703 ( 18) TCGAACCCATAATCTTCTGAT 1 chrVII:828529-828958 ( 45) TCGAACCCATAATCTTCTGAT 1 chrX:355203-355655 ( 31) TCGAACCCATAATCTTCTGAT 1 chrXIII:131725-132051 ( 2) TCGAACCCATAATCTTCTGAT 1 chrII:405719-406149 ( 30) TCGAACCCATAATCTTCTGAT 1 chrV:138501-138895 ( 54) TCGAACCCATAATCTTCTGAT 1 chrIII:82428-82593 ( 17) TCGAACCCCGGTCTCCACGGT 1 chrV:487245-487520 ( 14) TCGAACCCCGGTCTCCACGGT 1 chrXIII:290662-290958 ( 77) TCGAACCCCGGTCTCCACGGT 1 chrVII:541703-542075 ( 47) TCGAACCCCGGTCTCCACGGT 1 chrVII:328453-328837 ( 24) TCGAACCCCGGTCTCCACGGT 1 chrII:645017-645334 ( 78) TCGAACCCCGGTCTCCACGGT 1 chrV:176952-177291 ( 64) TCGAACCCCGGTCTCCACGGT 1 chrIV:1017077-1017447 ( 10) TCGAACCCCGGTCTCCACGGT 1 chrVIII:237742-238081 ( 2) TCGAACACAGGACCTCCAGAT 1 chrXVI:560082-560440 ( 2) TCGAACACAGGACCTCCAGAT 1 chrIX:174945-175159 ( 66) TTGAACCGATGATCTCCACAT 1 chrXIV:560593-560831 ( 46) TTGAACCGATGATCTCCACAT 1 chrIII:295338-295682 ( 61) TTGAACCGATGATCTCCACAT 1 chrIV:434156-434446 ( 28) TTGAACCGATGATCTCCACAT 1 chrXIV:104667-105031 ( 43) TTGAACCGATGATCTCCACAT 1 chrII:266220-266592 ( 59) TTGAACCGATGATCTCCACAT 1 chrIX:325602-325916 ( 76) TTGAACCGATGATCTCCACAT 1 chrXIII:768279-768458 ( 66) TCGAACCGGAGACCTCTCCCA 1 chrVI:101363-101564 ( 30) TTGAACCCAGGGCCTCTCGCA 1 chrVIII:146143-146329 ( 71) TCGAACCGGAGACCTCTCCCA 1 chrXII:92476-92718 ( 68) TTGAACCCAGGGCCTCTCGCA 1 chrXVI:856877-857100 ( 1) TCGAACCGGAGACCTCTCCCA 1 chrXIV:547053-547323 ( 23) TTGAACCCAGGGCCTCTCGCA 1 chrXV:464355-464635 ( 71) TTGAACCCAGGGCCTCTCGCA 1 chrXV:980574-980872 ( 79) TTGAACCCAGGGCCTCTCGCA 1 chrXII:656847-657137 ( 7) TCGAACCGGAGACCTCTCCCA 1 chrXIII:321048-321354 ( 11) TCGAACCGGAGACCTCTCCCA 1 chrXIV:567993-568331 ( 70) TTGAACCCAGGGCCTCTCGCA 1 chrX:197219-197534 ( 2) TCGAACCGGAGACCTCTCCCA 1 chrVII:774177-774570 ( 63) TCGAACCGGAGACCTCTCCCA 1 chrIV:488582-489007 ( 68) TCGAACTCGGGATCTTCGCCG 1 chrXI:578805-579223 ( 61) TCGAACCCCTGACATTTCGGT 1 chrVIII:475579-475919 ( 22) TCGAACTCGGGACCTTTGCCG 1 chrXV:110861-111127 ( 33) TCGAACCCGTGTCCCCACCTT 1 chrXIV:96127-96458 ( 14) TCGAACCCGTGTCCCCACCTT 1 chrXIII:168703-168997 ( 48) TCGAACGCCCGATCTCAAGAT 1 chrX:354136-354436 ( 61) TCGAACGCCCGATCTCAAGAT 1 chrVI:167305-167619 ( 78) TCGAACGCCCGATCTCAAGAT 1 chrX:542822-543204 ( 8) TCGAACGCCCGATCTCAAGAT 1 chrXIII:808140-808468 ( 7) TCGAACTGGGGTTGTTCGGAT 1 chrX:538435-538713 ( 67) TCGAACCCGCAGTCTTCTCCT 1 chrV:438569-438854 ( 77) TCGAACTGGGGACGTTCTGCG 1 chrXV:663708-664018 ( 14) TCGAACTGGGGACGTTCTGCG 1 chrXIII:372360-372643 ( 9) TCGAACTGGGGACGTTCTGCG 1 chrXIII:420480-420808 ( 9) TCGAACTGGGGACGTTCTGCG 1 chrVII:412166-412523 ( 15) TCGAACTGGGGACGTTCTGCG 1 chrVII:823349-823668 ( 62) TCGAACTGGGGACGTTCTGCG 1 chrXV:976348-976593 ( 38) TCGAACTCTCGACCTTCAGAT 1 chrXIII:572749-573113 ( 17) TCGAACTCTCGACCTTCAGAT 1 chrIV:1175673-1176010 ( 75) TCGAACTCTCGACCTTCAGAT 1 chrXII:975837-976108 ( 76) TTGAACTCACGATCTTGCGAT 1 chrXI:74476-74790 ( 79) TTGAACTCACGATCTTGCGAT 1 chrXIV:632465-632775 ( 67) TTGAACTCACGATCTTGCGAT 1 chrVI:137355-137699 ( 24) TTGAACTCACGATCTTGCGAT 1 chrVII:730982-731329 ( 70) TTGAACTCACGATCTTGCGAT 1 chrV:492243-492441 ( 75) TTGAACCTGGAATCTTCTGGT 1 chrIV:619853-620190 ( 13) TTGAACCTGGAATCTTCTGGT 1 chrXV:340082-340519 ( 64) TTGAACCTGGAATCTTCTGGT 1 chrVIII:466894-467122 ( 68) TTGAACTAGCGACCTTTGCAT 1 chrXVI:56035-56372 ( 31) TTGAACCTGCAACCCTTCGAT 1 chrVII:1004085-1004394 ( 63) TTGAACTAACGACCTTTGCAT 1 chrXVI:744132-744458 ( 75) TTGAACTAACGACCTTTGCAT 1 chrVII:661594-661924 ( 76) TTGAACTAACGACCTTTGCAT 1 chrVII:706994-707216 ( 68) TCGAACTAAGGACCAACAGAT 1 chrXVI:435786-436129 ( 1) TCGAACTAAGGACCAACAGAT 1 chrIII:149768-150090 ( 77) TCGATCCGAGGACATCAGGGT 1 chrV:434469-434632 ( 56) TCGAACCAGGGTTTCATCGGC 1 chrVII:319737-319978 ( 10) TCGAACCAGGGTTTCATCGGC 1 chrVII:110438-110800 ( 71) TCGAACCAGGGTTTCATCGGC 1 chrVIII:62620-62923 ( 70) TCGAACCAGGGTTTCATCGGC 1 chrXIII:362928-363227 ( 73) TCGAACCAGGGTTTCATCGGC 1 chrXV:594269-594568 ( 1) TCGAACCCGGGCCTCATGCTT 1 chrXII:818488-818773 ( 65) TCGAACCCGGATCACAGCCAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCGAACCSVKGAYCTYHYGAT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 41737 bayes= 7.51079 E= 1.8e-341 -1348 -1348 -1348 171 -1348 199 -1348 -42 -1348 -1348 236 -1348 171 -1348 -1348 -1348 170 -1348 -1348 -512 -1348 236 -1348 -1348 -412 194 -247 -60 -166 134 95 -312 13 39 99 -354 -231 -30 120 13 -54 -1348 202 -1348 116 -447 -77 -66 -1348 157 -1348 46 -354 194 -89 -131 -412 48 -1348 122 -121 128 -1348 37 -21 114 -189 -26 -95 99 -8 -17 -1348 66 183 -1348 76 28 17 -354 -121 -189 -147 129 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCGAACCSVKGAYCTYHYGAT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 114 E= 1.8e-341 0.000000 0.000000 0.000000 1.000000 0.000000 0.771930 0.000000 0.228070 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.991228 0.000000 0.000000 0.008772 0.000000 1.000000 0.000000 0.000000 0.017544 0.745614 0.035088 0.201754 0.096491 0.491228 0.377193 0.035088 0.333333 0.254386 0.385965 0.026316 0.061404 0.157895 0.447368 0.333333 0.210526 0.000000 0.789474 0.000000 0.684211 0.008772 0.114035 0.192982 0.000000 0.578947 0.000000 0.421053 0.026316 0.745614 0.105263 0.122807 0.017544 0.271930 0.000000 0.710526 0.131579 0.473684 0.000000 0.394737 0.263158 0.429825 0.052632 0.254386 0.157895 0.385965 0.184211 0.271930 0.000000 0.307018 0.692982 0.000000 0.517544 0.236842 0.219298 0.026316 0.131579 0.052632 0.070175 0.745614 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCGAACCSVKGAYCTYHYGAT MEME-3 regular expression -------------------------------------------------------------------------------- T[CT]GAAC[CT][CG][GAC][GT][GA]A[CT]C[TC][CT][CAT][CT][GC][ACG]T -------------------------------------------------------------------------------- Time 712.32 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrVII:914756-915304 6.19e-01 100 chrI:141472-142056 9.59e-01 100 chrXII:459523-460146 9.85e-01 100 chrXIV:619650-620150 7.24e-01 100 chrII:477076-477664 5.43e-01 100 chrXV:877608-878157 6.65e-01 100 chrXII:460432-460759 3.76e-01 100 chrIX:316154-316590 7.46e-01 100 chrXV:216265-216667 5.61e-01 100 chrXII:97416-97934 8.44e-01 100 chrXVI:74900-75394 2.03e-01 100 chrXII:796426-796832 5.25e-01 100 chrII:444601-445110 1.93e-01 100 chrXV:168004-168389 4.48e-01 100 chrV:305808-306206 9.62e-01 100 chrIII:163488-163865 1.46e-01 100 chrV:140490-140872 2.49e-01 100 chrVII:771822-772388 8.79e-01 100 chrXII:922117-922530 4.45e-01 100 chrXVI:699980-700368 1.90e-01 100 chrVII:149115-149481 8.69e-01 100 chrII:332349-332722 5.20e-01 100 chrXII:713173-713535 9.77e-01 100 chrXII:65365-65816 5.28e-01 100 chrXIII:551387-551780 9.70e-01 100 chrIV:974261-974725 3.78e-01 100 chrXIII:631867-632506 8.51e-01 100 chrXV:380589-381096 7.12e-01 100 chrVIII:382933-383314 1.67e-01 100 chrVIII:125946-126299 9.22e-01 100 chrXII:781481-781824 7.98e-01 100 chrXIV:507187-507641 5.99e-01 100 chrXVI:731936-732286 5.14e-01 100 chrIV:1359423-1359785 9.94e-01 100 chrIV:117200-117555 8.85e-01 100 chrIV:465173-465609 6.92e-01 100 chrVIII:74990-75348 8.86e-01 100 chrV:364136-364557 9.96e-01 100 chrXI:618827-619181 1.11e-01 100 chrVII:534823-535199 9.62e-01 100 chrIV:416842-417229 4.87e-01 100 chrXII:88113-88519 9.25e-01 100 chrXV:866584-866939 8.54e-02 100 chrXV:1028733-1029069 9.82e-01 100 chrIV:130610-130942 9.43e-01 100 chrII:592921-593251 8.00e-01 100 chrVII:788339-788708 5.97e-01 100 chrIV:411289-411624 1.04e-01 100 chrVII:310535-310884 5.49e-01 100 chrX:90087-90435 4.67e-01 100 chrX:521657-522065 4.56e-01 100 chrXVI:842847-843257 9.45e-01 100 chrX:703271-703608 6.45e-01 100 chrXVI:352232-352622 3.66e-01 100 chrXV:79776-80115 3.02e-01 100 chrXIV:63140-63493 7.36e-01 100 chrXII:673864-674210 2.05e-01 100 chrIV:892375-892732 8.60e-01 100 chrXIII:225384-225718 1.47e-01 100 chrV:53543-53886 9.67e-01 100 chrIV:1300969-1301320 4.54e-01 100 chrXII:665023-665414 9.65e-01 100 chrXV:505148-505487 4.75e-01 100 chrV:85129-85571 3.80e-01 100 chrVIII:505840-506174 2.67e-01 100 chrIV:806159-806585 1.43e-01 100 chrII:415522-415852 7.16e-01 100 chrXII:241657-241998 9.21e-01 100 chrIV:1401265-1401592 8.95e-01 100 chrIII:137222-137549 5.39e-01 100 chrV:423125-423444 7.94e-01 100 chrVII:648979-649310 7.83e-01 100 chrX:75385-75715 3.64e-01 100 chrVII:254178-254527 1.62e-01 100 chrV:396230-396558 4.93e-02 100 chrXIV:495202-495517 3.60e-01 100 chrXVI:520198-520522 5.02e-01 100 chrIV:765238-765595 2.92e-01 100 chrVI:95501-95832 2.75e-01 100 chrIX:99664-99984 7.21e-01 100 chrII:605756-606104 4.10e-01 100 chrX:73430-73764 3.63e-01 100 chrIV:221980-222295 7.67e-01 100 chrXVI:76354-76687 4.51e-01 100 chrII:45026-45344 6.27e-01 100 chrXVI:406215-406542 7.05e-01 100 chrXIII:732063-732376 6.15e-01 100 chrIX:248648-249047 1.48e-09 58_[+1(4.09e-11)]_22 chrIV:341291-341597 8.31e-02 100 chrVII:774177-774570 7.17e-16 30_[+2(3.75e-10)]_4_[-3(1.97e-08)]_\ 17 chrVII:277065-277365 7.75e-01 100 chrII:89648-89948 9.99e-01 100 chrXI:158255-158580 7.04e-01 100 chrXV:92961-93286 1.23e-01 100 chrXVI:98659-99111 6.29e-01 100 chrVI:65014-65312 8.45e-01 100 chrV:311885-312252 1.52e-15 19_[+3(1.60e-09)]_4_[-2(3.67e-12)]_\ 28 chrI:138979-139360 2.37e-07 30_[+1(1.75e-08)]_50 chrVII:883792-884246 6.53e-01 100 chrXV:779727-780059 7.24e-01 100 chrXIV:96127-96458 1.69e-09 13_[+3(3.44e-08)]_3_[-2(7.10e-08)]_\ 35 chrXV:678845-679164 4.54e-01 100 chrVII:661594-661924 6.85e-08 43_[+2(1.23e-07)]_4_[-3(4.67e-07)]_\ 4 chrXII:366087-366418 3.68e-01 100 chrIII:227789-228156 1.19e-08 25_[+1(4.09e-11)]_55 chrXIII:145928-146254 3.72e-02 100 chrIV:308030-308365 5.95e-01 100 chrXVI:769106-769483 4.69e-10 25_[-2(2.06e-13)]_47 chrX:415847-416208 5.21e-06 27_[-2(3.90e-08)]_45 chrVIII:388789-389155 5.27e-08 55_[-1(2.49e-09)]_25 chrX:617752-618082 1.97e-07 57_[+1(1.65e-11)]_23 chrIV:1175673-1176010 7.15e-10 42_[+2(1.00e-08)]_4_[-3(6.40e-08)]_\ 5 chrXII:932117-932463 3.94e-01 100 chrXIII:379233-379568 5.21e-06 26_[-2(3.90e-08)]_46 chrXIII:808140-808468 7.77e-12 6_[+3(3.83e-08)]_3_[-2(4.20e-09)]_\ 42 chrV:138501-138895 1.95e-12 15_[+1(2.90e-07)]_18_[-3(3.82e-09)]_\ 26 chrVII:809616-809949 1.84e-02 3_[-2(4.69e-05)]_69 chrX:424348-424685 1.99e-07 23_[-1(5.13e-11)]_57 chrII:197336-197635 9.02e-06 64_[+1(1.65e-09)]_16 chrVI:106209-106545 8.04e-01 100 chrXVI:622448-622803 1.83e-08 23_[-2(6.53e-12)]_49 chrII:604152-604448 1.54e-01 100 chrXV:274500-274879 3.23e-09 39_[+1(5.13e-11)]_41 chrVII:287249-287614 6.06e-05 42_[-2(3.90e-08)]_30 chrXI:302752-303129 5.59e-05 31_[+2(3.90e-08)]_41 chrX:390942-391285 2.52e-06 19_[-2(1.00e-08)]_53 chrII:60877-61213 9.96e-01 100 chrX:157455-157789 5.43e-01 100 chrVIII:103918-104220 9.07e-01 100 chrXVI:860210-860551 4.20e-07 46_[+1(1.04e-08)]_34 chrXV:353937-354278 1.93e-08 30_[-1(1.65e-09)]_50 chrXIII:259052-259388 2.11e-09 43_[-1(3.27e-11)]_37 chrXIV:480913-481290 7.77e-01 100 chrVIII:116008-116342 1.96e-08 28_[-1(1.65e-09)]_52 chrXII:731983-732281 5.72e-08 13_[+1(1.65e-11)]_67 chrXIII:362928-363227 2.21e-06 41_[+2(5.30e-07)]_3_[-3(1.38e-06)]_\ 7 chrVII:555357-555668 4.00e-01 100 chrVII:730982-731329 1.09e-09 37_[+1(1.07e-09)]_12_[-3(1.25e-07)]_\ 10 chrX:542822-543204 7.90e-06 7_[+3(3.83e-08)]_72 chrVII:438584-438889 4.74e-02 19_[-3(5.70e-05)]_60 chrXIV:241417-241722 2.19e-01 100 chrX:523904-524256 2.11e-09 37_[-1(3.27e-11)]_43 chrIX:257371-257678 5.06e-01 100 chrVIII:296900-297193 1.67e-01 100 chrV:99968-100299 2.02e-05 53_[+2(5.29e-08)]_19 chrXVI:744132-744458 8.51e-08 42_[+2(1.23e-07)]_4_[-3(4.67e-07)]_\ 5 chrXII:167853-168183 2.11e-09 31_[-1(3.27e-11)]_49 chrVII:823349-823668 6.91e-09 29_[+1(8.93e-08)]_12_[-3(5.23e-08)]_\ 18 chrVII:726449-726746 9.15e-01 100 chrII:36249-36560 1.36e-08 48_[+2(6.53e-12)]_24 chrIV:1017077-1017447 1.30e-10 9_[+3(5.74e-09)]_3_[-2(6.89e-09)]_\ 39 chrX:422782-423099 2.47e-06 51_[+2(1.00e-08)]_21 chrV:431075-431512 7.30e-03 6_[+3(9.81e-05)]_73 chrV:86407-86779 2.11e-09 66_[+1(3.27e-11)]_14 chrXII:448505-448868 1.36e-12 28_[+3(2.50e-09)]_3_[-2(4.20e-09)]_\ 20 chrXV:340082-340519 1.19e-03 63_[+3(2.11e-07)]_16 chrIX:254255-254533 6.12e-02 100 chrIX:325602-325916 1.23e-13 44_[+1(1.65e-09)]_11_[-3(1.39e-08)]_\ 4 chrXV:226524-226853 2.90e-06 25_[-1(8.93e-08)]_55 chrVI:221755-222058 8.24e-01 100 chrIV:1075366-1075708 1.61e-05 24_[-2(3.08e-08)]_48 chrVI:210514-210871 1.23e-01 100 chrXIII:572749-573113 1.09e-09 16_[+3(6.40e-08)]_4_[-2(1.00e-08)]_\ 31 chrII:405719-406149 6.96e-06 29_[-3(3.82e-09)]_50 chrXII:797010-797349 6.64e-06 53_[+2(8.97e-10)]_19 chrVII:878601-878972 6.06e-05 47_[-2(3.90e-08)]_25 chrX:414816-415154 1.97e-14 35_[+2(2.46e-12)]_4_[-3(3.33e-09)]_\ 12 chrXI:308042-308378 1.89e-04 31_[-1(8.93e-08)]_49 chrXIII:131725-132051 3.38e-12 1_[+3(3.82e-09)]_18_[-1(5.21e-07)]_\ 40 chrI:166143-166471 7.93e-16 14_[+2(3.67e-12)]_4_[-3(1.60e-09)]_\ 33 chrXVI:435786-436129 1.48e-07 [+3(7.72e-07)]_18_[-1(2.90e-06)]_41 chrXVI:689420-689786 1.30e-09 17_[+1(4.09e-11)]_63 chrXV:228170-228493 5.58e-06 55_[+1(1.07e-09)]_25 chrIII:123446-123793 5.05e-14 22_[+3(1.97e-11)]_18_[-1(1.11e-07)]_\ 19 chrVII:412166-412523 6.91e-09 14_[+3(5.23e-08)]_12_[-1(8.93e-08)]_\ 33 chrXII:1028254-1028557 3.49e-01 100 chrIII:168205-168550 5.16e-07 12_[-2(4.20e-09)]_60 chrXVI:210095-210424 4.30e-06 21_[-2(8.97e-10)]_51 chrIII:127564-127880 6.54e-06 49_[+1(1.07e-09)]_31 chrIV:437617-437975 2.11e-09 31_[+1(3.27e-11)]_49 chrVII:736166-736503 2.61e-07 53_[+1(5.21e-07)]_27 chrX:355203-355655 6.96e-06 30_[-3(3.82e-09)]_49 chrXIII:837763-838099 5.65e-02 100 chrVII:205363-205725 1.10e-05 32_[+1(1.65e-09)]_48 chrXII:1018989-1019333 4.81e-01 100 chrVII:779452-779761 1.59e-04 64_[+2(7.10e-08)]_8 chrVII:828529-828958 1.22e-08 44_[+3(3.82e-09)]_4_[-2(7.87e-07)]_\ 3 chrXV:170498-170805 5.79e-01 100 chrXII:374187-374531 4.78e-07 51_[+1(2.58e-07)]_29 chrVI:162070-162385 4.20e-07 48_[+1(1.04e-08)]_32 chrVII:1004085-1004394 6.85e-08 30_[+2(1.23e-07)]_4_[-3(4.67e-07)]_\ 17 chrV:288337-288677 1.30e-09 41_[-1(4.09e-11)]_39 chrX:233773-234084 2.32e-06 66_[+1(2.58e-07)]_14 chrXIII:754426-754733 5.96e-01 100 chrII:266220-266592 1.23e-13 27_[+1(1.65e-09)]_11_[-3(1.39e-08)]_\ 21 chrVI:157859-158170 3.28e-08 10_[-2(6.53e-12)]_62 chrIX:68237-68525 9.89e-01 100 chrVIII:62620-62923 2.22e-06 38_[+2(5.30e-07)]_3_[-3(1.38e-06)]_\ 10 chrX:538435-538713 1.07e-08 34_[+2(1.31e-07)]_4_[-3(4.72e-08)]_\ 13 chrV:176952-177291 2.44e-11 32_[+2(8.97e-10)]_3_[-3(5.74e-09)]_\ 16 chrIX:300137-300462 1.98e-08 18_[-2(2.46e-12)]_54 chrIV:83387-83701 2.93e-07 51_[+1(9.36e-09)]_29 chrXV:370825-371143 9.69e-01 100 chrIV:769071-769406 2.62e-01 100 chrVII:738975-739302 2.46e-11 39_[+1(1.65e-09)]_12_[-3(1.86e-09)]_\ 8 chrXIV:104667-105031 1.23e-13 11_[+1(1.65e-09)]_11_[-3(1.39e-08)]_\ 37 chrV:61767-62093 6.33e-13 24_[+3(2.16e-09)]_17_[-1(1.04e-08)]_\ 18 chrVII:422921-423297 1.10e-05 38_[+1(1.65e-09)]_42 chrX:380921-381311 7.83e-01 100 chrVII:115345-115690 4.69e-10 25_[+2(2.06e-13)]_47 chrXI:379530-379829 3.12e-04 56_[+1(8.93e-08)]_24 chrII:645017-645334 2.44e-11 46_[+2(8.97e-10)]_3_[-3(5.74e-09)]_\ 2 chrIII:142614-142929 3.81e-07 32_[-1(9.36e-09)]_48 chrVII:845491-845823 6.33e-13 39_[+1(1.04e-08)]_17_[-3(2.16e-09)]_\ 3 chrII:326694-327031 3.44e-05 27_[-1(6.62e-07)]_53 chrVIII:134161-134499 1.36e-12 45_[+2(4.20e-09)]_3_[-3(2.50e-09)]_\ 3 chrVI:137355-137699 1.09e-09 23_[+3(1.25e-07)]_12_[-1(1.07e-09)]_\ 24 chrXII:784198-784565 2.15e-08 28_[+1(5.13e-11)]_52 chrVIII:132958-133276 4.98e-10 14_[-1(3.27e-11)]_66 chrXI:578805-579223 1.25e-14 5_[+2(2.06e-13)]_27_[-3(2.47e-08)]_\ 19 chrVI:180864-181200 6.33e-13 6_[+3(2.16e-09)]_17_[-1(1.04e-08)]_\ 36 chrV:441839-442588 8.17e-01 100 chrX:59024-59316 1.14e-08 26_[-1(1.65e-09)]_54 chrX:651307-651576 9.35e-01 100 chrXIV:108105-108472 2.86e-01 100 chrXVI:560082-560440 4.18e-14 1_[+3(9.60e-09)]_23_[-2(6.53e-12)]_\ 27 chrX:197219-197534 1.87e-15 1_[+3(1.97e-08)]_4_[-2(3.75e-10)]_\ 46 chrXIV:567993-568331 2.92e-12 [+1(1.58e-08)]_49_[-3(1.97e-08)]_10 chrVII:328453-328837 2.16e-05 23_[-3(5.74e-09)]_56 chrXII:875229-875576 4.69e-10 28_[+2(2.06e-13)]_44 chrVII:544468-544814 4.16e-02 100 chrXV:300928-301308 9.12e-08 26_[+1(1.58e-08)]_54 chrVII:440625-440964 4.01e-08 30_[-2(6.53e-12)]_42 chrXVI:819369-819690 1.40e-05 55_[+1(1.65e-09)]_25 chrIV:520810-521147 4.87e-12 48_[+2(4.20e-09)]_3_[-3(2.50e-09)] chrV:469306-469615 2.58e-04 52_[+1(8.93e-08)]_28 chrXII:605187-605577 3.83e-06 67_[-2(3.08e-09)]_5 chrXII:592435-592739 7.00e-08 56_[-1(1.65e-11)]_24 chrIV:992678-993007 7.01e-13 37_[+1(1.16e-08)]_17_[-3(2.16e-09)]_\ 5 chrIX:324217-324532 1.68e-01 100 chrXIII:296811-297093 8.94e-02 100 chrIV:359423-359756 4.69e-10 42_[+2(2.06e-13)]_30 chrXI:490805-491139 4.78e-07 51_[+1(2.58e-07)]_29 chrX:378199-378525 3.12e-04 53_[+1(8.93e-08)]_27 chrXII:897727-898015 8.25e-01 100 chrVII:541703-542075 2.44e-11 15_[+2(8.97e-10)]_3_[-3(5.74e-09)]_\ 33 chrVII:110438-110800 2.40e-03 70_[+3(1.38e-06)]_9 chrXV:288044-288376 6.17e-02 100 chrVIII:237742-238081 4.18e-14 1_[+3(9.60e-09)]_23_[-2(6.53e-12)]_\ 27 chrXI:108771-109070 7.85e-01 100 chrIV:1150718-1151090 6.26e-08 61_[-1(5.13e-11)]_19 chrVI:167305-167619 7.90e-06 77_[-3(3.83e-08)]_2 chrXII:962900-963213 2.75e-07 23_[-1(5.13e-11)]_57 chrXII:214794-215090 1.10e-15 5_[+3(1.60e-09)]_4_[-2(3.67e-12)]_\ 42 chrX:115841-116179 7.66e-06 17_[-2(8.97e-10)]_55 chrIII:90757-91078 2.52e-01 100 chrXIII:352123-352421 3.25e-08 62_[+2(6.53e-12)]_10 chrIII:149768-150090 2.41e-08 44_[+2(5.29e-08)]_4_[-3(8.26e-07)]_\ 3 chrIV:1095266-1095618 3.02e-08 36_[-2(5.40e-12)]_36 chrIV:488582-489007 2.31e-04 67_[+3(2.47e-08)]_12 chrXIII:290662-290958 2.44e-11 45_[+2(8.97e-10)]_3_[-3(5.74e-09)]_\ 3 chrXVI:338763-339079 4.70e-05 16_[-2(5.29e-08)]_56 chrXI:162366-162703 3.38e-12 17_[+3(3.82e-09)]_18_[-1(5.21e-07)]_\ 24 chrXII:734647-734960 1.34e-05 54_[+1(1.65e-09)]_26 chrIV:619853-620190 2.43e-10 12_[+3(2.11e-07)]_11_[-1(2.58e-07)]_\ 36 chrVI:191474-191741 3.23e-09 30_[-1(5.13e-11)]_50 chrVII:794262-794571 1.40e-09 55_[+2(3.67e-12)]_17 chrXIV:442859-443224 1.10e-05 20_[+1(1.65e-09)]_60 chrXI:517820-518127 9.44e-11 69_[+2(3.75e-10)]_3 chrXII:573199-573568 7.92e-01 100 chrXI:140920-141247 6.74e-06 23_[-2(8.97e-10)]_49 chrXV:438490-438847 4.69e-10 29_[+2(2.06e-13)]_43 chrX:374320-374734 9.25e-09 43_[+3(3.82e-09)]_4_[-2(7.87e-07)]_\ 4 chrXIV:632465-632775 1.09e-09 34_[+1(1.07e-09)]_12_[-3(1.25e-07)]_\ 13 chrXII:793754-794054 2.59e-01 100 chrXII:426967-427288 1.62e-01 100 chrII:226951-227268 2.11e-09 21_[+1(3.27e-11)]_59 chrIV:1305483-1305787 2.11e-09 50_[+1(3.27e-11)]_30 chrIX:197446-197749 2.89e-05 49_[+2(6.89e-09)]_23 chrVII:122117-122470 1.97e-14 30_[+2(2.46e-12)]_4_[-3(3.33e-09)]_\ 17 chrXIII:586545-586864 3.09e-04 29_[-1(8.93e-08)]_51 chrVIII:475579-475919 2.31e-09 21_[+3(3.09e-08)]_4_[-2(3.08e-08)]_\ 26 chrXII:48742-49063 9.15e-01 100 chrXIV:102561-102883 7.50e-06 49_[+1(1.07e-09)]_31 chrXIII:420480-420808 6.91e-09 8_[+3(5.23e-08)]_12_[-1(8.93e-08)]_\ 39 chrVIII:358397-358730 3.08e-08 23_[-2(6.53e-12)]_49 chrXII:628229-628594 9.34e-06 27_[+1(1.65e-09)]_53 chrV:135300-135621 2.91e-14 29_[+3(3.33e-09)]_4_[-2(2.46e-12)]_\ 18 chrXIII:195988-196314 7.56e-08 51_[-1(1.04e-08)]_29 chrVII:876237-876551 7.74e-09 54_[+2(2.46e-12)]_18 chrXIII:372360-372643 6.91e-09 8_[+3(5.23e-08)]_12_[-1(8.93e-08)]_\ 39 chrXIII:480531-480839 2.91e-14 [+3(3.33e-09)]_4_[-2(2.46e-12)]_47 chrXII:498533-498859 9.52e-01 100 chrXV:663708-664018 6.91e-09 13_[+3(5.23e-08)]_12_[-1(8.93e-08)]_\ 34 chrXVI:880206-880532 2.20e-05 24_[-1(1.65e-09)]_56 chrXV:282010-282320 7.32e-07 46_[+1(1.93e-08)]_34 chrIV:1201613-1201912 2.91e-14 42_[+2(2.46e-12)]_4_[-3(3.33e-09)]_\ 5 chrIX:336258-336572 1.66e-01 100 chrX:396646-396955 4.20e-07 28_[-1(1.04e-08)]_52 chrVII:700507-701186 9.91e-01 100 chrXVI:572113-572481 9.39e-13 19_[+1(1.58e-08)]_17_[-3(2.16e-09)]_\ 23 chrX:204584-204928 4.16e-02 100 chrXV:571796-572124 1.61e-01 100 chrXIII:321048-321354 2.65e-15 10_[+3(1.97e-08)]_4_[-2(3.75e-10)]_\ 37 chrVII:857278-857646 1.10e-05 53_[-1(1.65e-09)]_27 chrXIV:444477-444755 9.11e-01 100 chrXVI:56035-56372 2.26e-03 30_[+3(3.44e-07)]_49 chrV:117638-118231 6.41e-01 100 chrXI:46680-46952 8.73e-06 8_[-2(8.77e-08)]_64 chrVII:531470-531770 4.16e-02 100 chrIV:519626-519905 5.79e-08 33_[+1(5.13e-11)]_47 chrXIII:747800-748122 6.53e-07 34_[-1(5.21e-07)]_46 chrXV:594269-594568 5.36e-10 [+3(3.21e-06)]_18_[-1(1.46e-07)]_41 chrXIV:374739-374998 3.24e-08 55_[+2(5.40e-12)]_17 chrVI:226583-226872 2.91e-14 25_[+3(3.33e-09)]_4_[-2(2.46e-12)]_\ 22 chrV:354777-355076 1.46e-05 62_[+2(8.97e-10)]_10 chrV:131011-131314 6.52e-06 8_[-2(4.20e-09)]_64 chrXII:656847-657137 7.17e-16 6_[+3(1.97e-08)]_4_[-2(3.75e-10)]_\ 41 chrXI:74476-74790 1.87e-11 46_[+1(1.07e-09)]_12_[-3(1.25e-07)]_\ 1 chrX:354136-354436 7.61e-06 60_[-3(3.83e-08)]_19 chrXV:113653-113934 2.26e-08 64_[+1(1.65e-09)]_16 chrVII:366106-366412 3.37e-01 100 chrXVI:645242-645574 9.08e-01 100 chrXV:710053-710338 1.10e-05 59_[+2(5.29e-08)]_13 chrII:350692-350966 2.73e-05 52_[+2(4.20e-09)]_20 chrIV:568742-569146 6.96e-06 23_[-3(3.82e-09)]_56 chrIX:183325-183663 2.46e-11 10_[+3(1.86e-09)]_12_[-1(1.65e-09)]_\ 37 chrIV:434156-434446 1.23e-13 27_[+3(1.39e-08)]_11_[-1(1.65e-09)]_\ 21 chrII:165128-165410 2.83e-01 100 chrIV:358126-358388 7.49e-01 100 chrI:81971-82237 4.61e-01 100 chrV:438569-438854 1.34e-08 44_[+1(8.93e-08)]_12_[-3(5.23e-08)]_\ 3 chrXI:84058-84367 2.75e-07 51_[+1(5.13e-11)]_29 chrVIII:175091-175358 1.80e-01 100 chrXVI:188649-188901 2.41e-01 100 chrII:381001-381325 8.35e-01 100 chrXII:818488-818773 4.33e-07 33_[+2(3.45e-07)]_3_[-3(3.73e-06)]_\ 15 chrIII:178356-178615 9.99e-01 100 chrV:435660-435947 2.91e-14 13_[+3(3.33e-09)]_4_[-2(2.46e-12)]_\ 34 chrVIII:148957-149223 6.53e-01 100 chrV:551201-551479 2.46e-11 9_[+3(1.86e-09)]_12_[-1(1.65e-09)]_\ 38 chrXV:978505-978808 6.21e-02 78_[+1(9.64e-05)]_2 chrXVI:810548-810816 6.79e-06 49_[+1(1.07e-09)]_31 chrIII:295338-295682 1.23e-13 29_[+1(1.65e-09)]_11_[-3(1.39e-08)]_\ 19 chrX:531705-532005 7.01e-13 20_[+1(1.16e-08)]_17_[-3(2.16e-09)]_\ 22 chrXV:978792-979115 4.17e-01 100 chrXVI:378682-378931 5.96e-01 100 chrXV:976348-976593 4.31e-09 5_[+2(1.00e-08)]_4_[-3(6.40e-08)]_\ 42 chrX:517724-518035 2.89e-05 23_[-2(5.29e-08)]_49 chrXIII:168703-168997 7.90e-06 47_[-3(3.83e-08)]_32 chrXIV:631763-632042 2.40e-13 8_[+3(1.97e-11)]_18_[-1(5.75e-07)]_\ 33 chrVII:405411-405668 1.08e-05 16_[-3(3.82e-09)]_63 chrXV:980574-980872 8.93e-13 7_[+1(2.49e-09)]_51_[-3(1.97e-08)]_\ 1 chrXI:513263-513524 1.88e-02 100 chrX:541403-541672 4.16e-02 100 chrIX:370260-370568 7.56e-06 57_[+2(8.97e-10)]_15 chrXV:161144-161381 7.58e-01 100 chrXIII:504727-505107 1.10e-05 33_[+1(1.65e-09)]_47 chrXIII:463420-463696 1.68e-01 100 chrXI:458447-458758 1.10e-05 10_[+1(1.65e-09)]_70 chrVIII:466894-467122 5.89e-08 35_[+2(1.23e-07)]_4_[-3(3.18e-07)]_\ 12 chrV:362233-362474 5.66e-01 100 chrV:443134-443380 2.46e-11 9_[+3(1.86e-09)]_12_[-1(1.65e-09)]_\ 38 chrII:9458-9741 2.14e-07 39_[+1(5.13e-11)]_41 chrVII:185597-185919 2.91e-14 20_[+3(3.33e-09)]_4_[-2(2.46e-12)]_\ 27 chrIV:410232-410516 6.44e-11 59_[+2(3.75e-10)]_13 chrXVI:302719-302966 9.93e-01 100 chrXIV:726059-726312 5.79e-08 56_[-1(5.13e-11)]_24 chrVII:483442-483667 6.41e-01 100 chrIV:217214-217481 5.65e-01 100 chrXV:110861-111127 3.63e-09 32_[+3(3.44e-08)]_3_[-2(7.10e-08)]_\ 16 chrXIV:560593-560831 1.23e-13 45_[+3(1.39e-08)]_11_[-1(1.65e-09)]_\ 3 chrV:225453-225718 8.13e-01 100 chrV:487245-487520 2.44e-11 13_[+3(5.74e-09)]_3_[-2(8.97e-10)]_\ 35 chrIV:802634-802873 1.07e-10 42_[+3(2.50e-09)]_3_[-2(4.20e-09)]_\ 6 chrXI:67785-68058 8.71e-01 100 chrVII:930915-931170 8.54e-05 13_[-1(1.04e-08)]_67 chrIV:579100-579348 6.95e-01 100 chrVII:785507-785784 3.96e-01 100 chrXIII:91823-92093 7.88e-01 100 chrXV:968144-968394 1.20e-01 100 chrV:69062-69336 2.51e-01 100 chrXI:382172-382427 1.12e-01 100 chrXV:464355-464635 1.97e-12 2_[+1(1.04e-08)]_48_[-3(1.97e-08)]_\ 9 chrVIII:271861-272152 6.41e-01 100 chrXII:370540-370883 7.31e-01 100 chrXIV:547053-547323 3.72e-07 22_[-3(1.97e-08)]_57 chrIV:1352395-1352661 2.91e-14 2_[+3(3.33e-09)]_4_[-2(2.46e-12)]_\ 45 chrXVI:794550-794792 5.63e-01 100 chrIV:884228-884582 2.30e-08 10_[+2(3.08e-09)]_62 chrIV:1450948-1451172 9.10e-01 100 chrX:607868-608119 8.01e-01 100 chrVII:319737-319978 6.94e-03 9_[-3(1.38e-06)]_70 chrXV:265127-265363 9.89e-01 100 chrXI:431399-431629 9.93e-01 100 chrXII:975837-976108 9.09e-04 75_[+3(1.25e-07)]_4 chrXIV:602240-602482 2.46e-11 6_[+1(1.65e-09)]_12_[-3(1.86e-09)]_\ 41 chrIV:1355757-1355972 8.97e-01 100 chrIII:78401-78647 7.17e-01 100 chrXIII:298598-298817 7.19e-01 100 chrIV:491030-491253 9.25e-01 100 chrXV:253825-254094 1.34e-01 100 chrVI:223941-224161 6.83e-01 100 chrVII:856752-856949 1.69e-01 100 chrIV:1461590-1461851 3.45e-01 100 chrXII:424209-424424 3.73e-02 100 chrVII:706994-707216 1.42e-03 67_[+3(7.72e-07)]_12 chrIII:38934-39151 9.81e-01 100 chrII:181391-181596 4.02e-01 100 chrIV:946274-946569 2.69e-01 100 chrXII:369689-370031 2.53e-02 100 chrXIV:569782-569978 1.32e-05 51_[+3(1.86e-09)]_28 chrXII:368418-368617 1.39e-01 100 chrXI:518944-519136 6.25e-02 100 chrVI:54965-55196 9.09e-01 100 chrIX:174945-175159 1.23e-13 34_[+1(1.65e-09)]_11_[-3(1.39e-08)]_\ 14 chrXVI:856877-857100 1.62e-04 [-3(1.97e-08)]_79 chrXVI:281673-281868 9.47e-01 100 chrX:391876-392093 4.19e-02 100 chrXIV:500490-500683 3.42e-01 100 chrXV:1025781-1025955 2.96e-01 100 chrVII:894440-894617 8.31e-01 100 chrVII:371280-371473 7.50e-01 100 chrXIV:330872-331073 3.44e-01 100 chrIV:229549-229736 9.23e-01 100 chrV:222372-222571 3.22e-01 100 chrXV:619224-619378 7.29e-02 100 chrIV:667901-668100 2.77e-05 71_[+3(1.86e-09)]_8 chrXII:92476-92718 2.20e-08 4_[+2(4.29e-06)]_35_[-3(1.97e-08)]_\ 12 chrIV:836104-836268 5.15e-02 100 chrXII:282532-282813 9.51e-01 100 chrXII:522208-522406 5.76e-01 100 chrXI:258755-258947 4.84e-01 100 chrV:492243-492441 6.34e-04 74_[+3(2.11e-07)]_5 chrIV:1013744-1013941 5.80e-02 31_[+1(7.07e-05)]_49 chrII:167973-168184 3.05e-01 100 chrXII:822737-822884 8.78e-01 100 chrVII:882853-883033 2.74e-01 100 chrVIII:146143-146329 1.58e-04 70_[+3(1.97e-08)]_9 chrIX:386711-386875 6.92e-01 100 chrVII:397982-398163 4.90e-01 100 chrXV:159711-160071 4.37e-01 100 chrVI:101363-101564 3.90e-07 29_[-3(1.97e-08)]_50 chrX:652285-652388 1.09e-01 100 chrV:270410-270570 9.63e-01 100 chrIV:1080560-1080739 8.19e-02 11_[+1(4.19e-05)]_69 chrVIII:35616-35760 7.22e-01 100 chrII:407234-407420 5.21e-01 100 chrXIV:763103-763277 6.54e-01 100 chrXIII:224118-224271 9.89e-01 100 chrI:142594-143062 3.31e-01 100 chrXI:99762-99929 2.77e-01 100 chrXIII:13218-13578 7.29e-01 100 chrVIII:450999-451240 3.72e-01 100 chrXII:233404-234036 3.56e-01 100 chrV:434469-434632 6.02e-03 55_[+3(1.38e-06)]_24 chrV:85900-86043 9.49e-01 100 chrVIII:98199-98349 4.01e-02 100 chrXIII:768279-768458 1.03e-04 65_[+3(1.97e-08)]_14 chrXV:797065-797213 2.16e-02 [-3(7.23e-05)]_79 chrXII:283261-283391 4.02e-01 100 chrVIII:34609-34969 8.86e-01 100 chrXIV:89160-89520 9.82e-01 100 chrIX:427036-427169 3.82e-01 100 chrIV:645077-645249 4.24e-05 54_[+3(2.50e-09)]_25 chrXI:259377-259469 6.33e-01 92 chrXV:825050-825141 9.55e-01 91 chrXV:780519-780662 4.47e-01 100 chrXIII:759455-759580 9.31e-01 100 chrIV:580074-580199 1.75e-01 100 chrXIII:302836-303196 3.04e-01 100 chrIV:915519-915879 5.05e-01 100 chrIV:386494-386854 2.52e-01 100 chrVII:561463-561823 9.86e-01 100 chrXII:201930-202290 3.01e-02 37_[+3(4.98e-05)]_42 chrVII:920039-920184 1.64e-01 100 chrXI:334410-334770 1.30e-01 100 chrX:195597-195957 5.82e-01 100 chrXIV:577133-577493 3.04e-01 100 chrIV:1165045-1165405 7.03e-01 100 chrX:349014-349374 9.11e-02 100 chrI:71980-72155 3.40e-01 100 chrIX:255260-255620 8.75e-04 9_[+1(1.29e-05)]_71 chrX:160097-160196 9.50e-02 99 chrXIV:586047-586407 7.59e-01 100 chrXVI:303527-303693 4.24e-01 100 chrXII:806224-806319 4.42e-01 95 chrXI:327057-327417 5.04e-02 100 chrVIII:34825-35185 6.31e-01 100 chrXII:263563-263923 6.20e-01 100 chrXIV:499388-499551 1.31e-01 100 chrXII:232445-232696 4.26e-01 100 chrIV:1489500-1489860 3.50e-01 100 chrX:545414-545774 1.80e-02 2_[+1(3.08e-05)]_78 chrX:140181-140307 6.36e-01 100 chrVII:557677-558037 1.51e-03 37_[+1(6.20e-06)]_43 chrXVI:405330-405690 5.90e-01 100 chrXII:198925-199285 7.31e-01 100 chrIV:45493-45853 8.98e-02 100 chrVII:439363-439723 3.81e-01 100 chrXVI:821763-822123 8.05e-01 100 chrVII:609666-610026 3.80e-01 100 chrXII:806285-806645 1.47e-02 17_[-3(6.98e-05)]_62 chrX:122267-122627 4.29e-01 100 chrIII:82428-82593 2.44e-11 16_[+3(5.74e-09)]_3_[-2(8.97e-10)]_\ 32 chrX:139434-139794 5.21e-01 100 chrXII:712376-712736 2.63e-02 36_[-3(8.57e-05)]_43 chrXI:552069-552429 8.41e-01 100 chrXVI:193939-194299 3.79e-01 100 chrXIII:220235-220595 1.79e-01 100 chrIII:230406-230766 6.33e-01 100 chrXV:911775-912135 9.32e-01 100 chrXI:141726-142086 4.99e-01 100 chrXIV:253559-253919 4.39e-01 100 chrXV:620478-620838 5.47e-01 100 chrIV:1328808-1329168 7.48e-01 100 chrVIII:422993-423353 3.64e-01 100 chrII:414031-414391 9.96e-01 100 chrII:414256-414616 5.59e-01 100 chrII:604796-605156 6.89e-01 100 chrXI:107655-108015 4.74e-01 100 chrXVI:194139-194499 9.72e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************