Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.012363 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.055196 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.069703 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.012961 Invoking: fasta-subsample /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/seqs-centered 600 -rest /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/seqs-discarded -seed 1 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/seqs-sampled Finished invoke: name: sample_seqs status: 0 time: 0.064154 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background Finished invoke: name: bg status: 0 time: 0.01066 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 939.297814 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/seqs-shuffled Finished invoke: name: dreme status: 0 time: 93.611868 Invoking: centrimo -seqlen 376 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.214097 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.587073 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background -primary GRATCGAACCSVKGAYCTYMNGRTTAMWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.437024 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background -primary DTGGCYYAGTGGKWWRRGSSNH /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.516804 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background -primary RWRATGTAYGGRTGTWWWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.411689 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background -primary BTAAGGCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.262912 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background -primary GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.246819 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background -primary GTGATAGY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.252757 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background -primary ATGGCAAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.25633 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background -primary ATGGGHG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.276446 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background -primary CACGGYG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.225223 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background -primary ARAAAAW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.312545 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background -primary ACGCSAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.269478 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background -primary AGCGCMAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.240388 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background -primary AAGCGWGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.222271 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background -primary AGTCAKAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.234369 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background -primary CTWGACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.223429 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/spamo_out_16 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background -primary GACTMCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.212027 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/spamo_out_17 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background -primary AGATCGKG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml Finished invoke: name: spamo17 status: 0 time: 0.247137 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background --motif GRATCGAACCSVKGAYCTYMNGRTTAMWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa Finished invoke: name: fimo1 status: 0 time: 0.216971 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background --motif DTGGCYYAGTGGKWWRRGSSNH /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa Finished invoke: name: fimo2 status: 0 time: 0.209634 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background --motif RWRATGTAYGGRTGTWWWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa Finished invoke: name: fimo3 status: 0 time: 0.206206 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background --motif BTAAGGCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa Finished invoke: name: fimo4 status: 0 time: 0.115804 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background --motif GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa Finished invoke: name: fimo5 status: 0 time: 0.114155 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background --motif GTGATAGY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa Finished invoke: name: fimo6 status: 0 time: 0.111557 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background --motif ATGGCAAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa Finished invoke: name: fimo7 status: 0 time: 0.110779 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background --motif ATGGGHG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa Finished invoke: name: fimo8 status: 0 time: 0.129121 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background --motif CACGGYG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa Finished invoke: name: fimo9 status: 0 time: 0.111489 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background --motif ARAAAAW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa Finished invoke: name: fimo10 status: 0 time: 0.097389 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background --motif ACGCSAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa Finished invoke: name: fimo11 status: 0 time: 0.109816 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background --motif AGCGCMAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa Finished invoke: name: fimo12 status: 0 time: 0.112242 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background --motif AAGCGWGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa Finished invoke: name: fimo13 status: 0 time: 0.111067 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background --motif AGTCAKAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa Finished invoke: name: fimo14 status: 0 time: 0.112672 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background --motif CTWGACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa Finished invoke: name: fimo15 status: 0 time: 0.111314 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/fimo_out_16 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background --motif GACTMCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa Finished invoke: name: fimo16 status: 0 time: 0.113173 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/fimo_out_17 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/background --motif AGATCGKG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/YJM789--HIR1.fa Finished invoke: name: fimo17 status: 0 time: 0.112553 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--HIR1/summary.tsv Finished invoke: name: summary status: 0 time: 0.164095 Done