******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--CUP9/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrIV:411274-411632 1.0000 100 chrXIV:374752-375031 1.0000 100 chrXI:326419-326769 1.0000 100 chrVII:366099-366408 1.0000 100 chrIV:836078-836289 1.0000 100 chrIII:163466-163866 1.0000 100 chrVI:221752-222059 1.0000 100 chrXV:424440-424561 1.0000 100 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100 chrVII:311198-311548 1.0000 100 chrV:469299-469596 1.0000 100 chrV:362224-362472 1.0000 100 chrXII:875233-875545 1.0000 100 chrVI:82500-82850 1.0000 100 chrIV:465228-465447 1.0000 100 chrVIII:34502-34852 1.0000 100 chrXV:253815-254103 1.0000 100 chrI:142642-142992 1.0000 100 chrXIII:195989-196317 1.0000 100 chrXIV:631770-632040 1.0000 100 chrXII:673854-674221 1.0000 100 chrVIII:123057-123407 1.0000 100 chrV:435666-435953 1.0000 100 chrV:269374-269724 1.0000 100 chrXI:259576-259926 1.0000 100 chrXI:108766-109069 1.0000 100 chrX:115848-115948 1.0000 100 chrIII:293633-293983 1.0000 100 chrX:354133-354233 1.0000 100 chrXVI:378684-378928 1.0000 100 chrXI:364670-365020 1.0000 100 chrII:332337-332727 1.0000 100 chrXIV:716283-716633 1.0000 100 chrX:349033-349133 1.0000 100 chrXV:571788-572117 1.0000 100 chrIII:162833-163183 1.0000 100 chrIV:434190-434437 1.0000 100 chrII:88109-88459 1.0000 100 chrVII:412201-412522 1.0000 100 chrX:157459-157559 1.0000 100 chrVIII:451694-451810 1.0000 100 chrIII:227782-228143 1.0000 100 chrXI:578822-579227 1.0000 100 chrXIV:444488-444761 1.0000 100 chrXII:1017990-1018340 1.0000 100 chrV:139546-139896 1.0000 100 chrVI:223947-224170 1.0000 100 chrXIII:301642-301992 1.0000 100 chrIX:183365-183667 1.0000 100 chrVII:823342-823665 1.0000 100 chrII:197328-197628 1.0000 100 chrII:592911-593272 1.0000 100 chrV:117738-118231 1.0000 100 chrXI:158819-159169 1.0000 100 chrXIV:555105-555455 1.0000 100 chrII:681963-682158 1.0000 100 chrVII:700509-701193 1.0000 100 chrV:85126-85455 1.0000 100 chrXIII:159343-159693 1.0000 100 chrVII:438584-438893 1.0000 100 chrVIII:40226-40576 1.0000 100 chrXIII:837765-838082 1.0000 100 chrXII:370630-370930 1.0000 100 chrXVI:810546-810822 1.0000 100 chrIX:300146-300477 1.0000 100 chrIV:217205-217502 1.0000 100 chrX:617750-617850 1.0000 100 chrXII:962904-963207 1.0000 100 chrVIII:411427-411777 1.0000 100 chrXIII:297966-298316 1.0000 100 chrXII:374198-374529 1.0000 100 chrX:197212-197312 1.0000 100 chrIX:99657-99992 1.0000 100 chrV:61769-62105 1.0000 100 chrII:167939-168184 1.0000 100 chrIV:1359409-1359799 1.0000 100 chrII:415520-415860 1.0000 100 chrIV:1352385-1352659 1.0000 100 chrX:59040-59140 1.0000 100 chrIX:138703-138848 1.0000 100 chrXVI:819366-819684 1.0000 100 chrX:542867-542967 1.0000 100 chrV:141063-141315 1.0000 100 chrII:628264-628614 1.0000 100 chrII:326715-327029 1.0000 100 chrIII:965-1315 1.0000 100 chrIV:358122-358407 1.0000 100 chrIV:619845-620183 1.0000 100 chrIX:68225-68522 1.0000 100 chrXIV:632468-632735 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--CUP9/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--CUP9/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--CUP9/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 596 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 59589 N= 596 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.296 C 0.204 G 0.204 T 0.296 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--CUP9/background): A 0.306 C 0.194 G 0.194 T 0.306 ******************************************************************************** ******************************************************************************** MOTIF GGCCBAGTKGKTWRAGSS MEME-1 width = 18 sites = 130 llr = 1951 E-value = 1.3e-367 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGCCBAGTKGKTWRAGSS MEME-1 Description -------------------------------------------------------------------------------- Simplified A 1:::1a1::::2665::: pos.-specific C ::864::12::1::2:65 probability G 9a:22:9:4a61:32935 matrix T ::223::93:464:11:: bits 2.4 * * 2.1 * * 1.9 * * 1.7 ** ** * * Relative 1.4 *** *** * * Entropy 1.2 *** *** ** *** (21.7 bits) 0.9 **** *** ** *** 0.7 **** *** ** ** *** 0.5 **** ****** ** *** 0.2 ****************** 0.0 ------------------ Multilevel GGCCCAGTGGGTAAAGCG consensus TTT T T TGG GC sequence G C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCBAGTKGKTWRAGSS MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------ chrIII:227782-228143 + 38 2.90e-10 ATGGCACTAT GGCCGAGTGGTTAAGGCG AGAGACTCGA chrV:288334-288682 - 41 2.90e-10 TAGGCACTAT GGCCGAGTGGTTAAGGCG ACAGACTTGA chrVIII:132957-133275 - 16 2.90e-10 GTGGCAACTT GGCCGAGTGGTTAAGGCG AAAGATTAGA chrXVI:689407-689772 + 34 2.90e-10 TGGGCACTAT GGCCGAGTGGTTAAGGCG ACAGACTTGA chrIV:1305469-1305792 + 58 2.90e-10 AAGGCAACTT GGCCGAGTGGTTAAGGCG AAAGATTAGA chrVI:191476-191736 - 32 2.90e-10 CTGTCCCAGT GGCCGAGTGGTTAAGGCG ATGCCCTGCT chrXII:167871-168182 - 24 2.90e-10 ATGGCAACTT GGCCGAGTGGTTAAGGCG AAAGATTAGA chrV:86427-86773 + 62 2.90e-10 ATGGCAACTT GGCCGAGTGGTTAAGGCG AAAGATTAGA chrII:226950-227264 + 26 2.90e-10 GAGGCAACTT GGCCGAGTGGTTAAGGCG AAAGATTAGA chrIX:248667-249045 + 52 2.90e-10 TAGGCACTAT GGCCGAGTGGTTAAGGCG ACAGACTTGA chrX:523912-524012 - 34 2.90e-10 AAGGCAACTT GGCCGAGTGGTTAAGGCG AAAGATTAGA chrXII:784200-784537 + 44 2.90e-10 CCGTCCCAGT GGCCGAGTGGTTAAGGCG ATGCCTGCTA chrXV:274504-274880 + 39 2.90e-10 GTGTCCCAGT GGCCGAGTGGTTAAGGCG ATGCCCTGCT chrIV:1150733-1151111 - 44 2.90e-10 CAGTCCCAGT GGCCGAGTGGTTAAGGCG ATGCCTGCTA chrXIII:259057-259402 - 35 2.90e-10 ATGGCAACTT GGCCGAGTGGTTAAGGCG AAAGATTAGA chrIV:437605-437941 + 57 2.90e-10 AAGGCAACTT GGCCGAGTGGTTAAGGCG AAAGATTAGA chrXVI:819366-819684 + 62 1.10e-09 ATGGTCTCTT GGCCCAGTTGGTTAAGGC ACCGTGCTAA chrII:197328-197628 + 74 1.10e-09 AAGGTCTCTT GGCCCAGTTGGTTAAGGC ACCGTGCTA chrIX:183365-183667 - 22 1.10e-09 CTGGTCTCTT GGCCCAGTTGGTTAAGGC ACCGTGCTAA chrV:551223-551467 - 38 1.10e-09 CAGGTCTCTT GGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXII:1052009-1052227 - 51 1.10e-09 ATGGTCTCTT GGCCCAGTTGGTTAAGGC ACCGTGCTAA chrVII:738967-739279 + 57 1.10e-09 TAGGTCTCTT GGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXIV:602244-602475 + 11 1.10e-09 ATGGTCTCTT GGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXIV:569801-569987 - 71 1.10e-09 GTGGTCTCTT GGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXII:734651-734958 + 56 1.10e-09 TTGGTCTCTT GGCCCAGTTGGTTAAGGC ACCGTGCTAA chrV:443130-443382 - 44 1.10e-09 TTGGTCTCTT GGCCCAGTTGGTTAAGGC ACCGTGCTAA chrX:617750-617850 + 65 1.93e-09 ATGGGAGTTT GGCCGAGTGGTTTAAGGC GTCAGATTTA chrXII:731980-732272 + 22 1.93e-09 ATGGGAGTTT GGCCGAGTGGTTTAAGGC GTCAGATTTA chrXII:592436-592743 - 55 1.93e-09 ATGGGAGTTT GGCCGAGTGGTTTAAGGC GTCAGATTTA chrX:59040-59140 - 21 2.76e-09 AAGCTTCTAT GGCCAAGTTGGTAAGGCG CCACACTAGT chrIV:434190-434437 - 48 2.76e-09 AAGCTTCTAT GGCCAAGTTGGTAAGGCG CCACACTAGT chrVIII:116011-116347 - 25 2.76e-09 GAGCTTCTAT GGCCAAGTTGGTAAGGCG CCACACTAGT chrIX:325589-325920 + 52 2.76e-09 GAGCTTCTAT GGCCAAGTTGGTAAGGCG CCACACTAGT chrXV:113656-113942 + 61 2.76e-09 TAGCTTCTAT GGCCAAGTTGGTAAGGCG CCACACTAGT chrXIV:560603-560822 - 78 2.76e-09 TCTAT GGCCAAGTTGGTAAGGCG CCACACTAGT chrIII:295379-295611 + 47 2.76e-09 AAGCTTCTAT GGCCAAGTTGGTAAGGCG CCACACTAGT chrXV:353940-354265 - 36 2.76e-09 CTGCTTCTAT GGCCAAGTTGGTAAGGCG CCACACTAGT chrV:311911-312245 - 42 3.93e-09 CTGGGCACAT GGCGCAGTTGGTAGCGCG CTTCCCTTGC chrXII:214783-215088 - 45 3.93e-09 TAGGGCACAT GGCGCAGTTGGTAGCGCG CTTCCCTTGC chrI:166141-166451 + 29 3.93e-09 TTGGGCACAT GGCGCAGTTGGTAGCGCG CTTCCCTTGC chrVII:794274-794568 + 54 3.93e-09 GCGGGCACAT GGCGCAGTTGGTAGCGCG CTTCCCTTGC chrXII:962904-963207 - 25 9.95e-09 ACGGAGGGTT GGCCGAGTGGTCTAAGGC GGCAGACTTA chrII:9442-9716 + 62 9.95e-09 GTGGAGGGTT GGCCGAGTGGTCTAAGGC GGCAGACTTA chrXI:84060-84355 + 59 9.95e-09 ATGGAGGGTT GGCCGAGTGGTCTAAGGC GGCAGACTTA chrX:424353-424453 - 22 9.95e-09 ATGGAGGGTT GGCCGAGTGGTCTAAGGC GGCAGACTTA chrXIV:726080-726313 - 46 9.95e-09 TTGGAGGGTT GGCCGAGTGGTCTAAGGC GGCAGACTTA chrXIV:632468-632735 + 56 1.15e-08 GTGACTCCAT GGCCAAGTTGGTTAAGGC GTGCGACTGT chrX:197212-197312 - 35 1.15e-08 TAGGGCGTGT GGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXVI:810546-810822 + 50 1.15e-08 GCGACTCCAT GGCCAAGTTGGTTAAGGC GTGCGACTGT chrIII:127559-127876 + 57 1.15e-08 ATGACTCCAT GGCCAAGTTGGTTAAGGC GTGCGACTGT chrXI:517822-518125 + 73 1.15e-08 ATGGGCGTGT GGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXIV:102572-102911 + 33 1.15e-08 AAGACTCCAT GGCCAAGTTGGTTAAGGC GTGCGACTGT chrXV:228167-228472 + 70 1.15e-08 TAGACTCCAT GGCCAAGTTGGTTAAGGC GTGCGACTGT chrXI:74476-74790 + 49 1.15e-08 TAGACTCCAT GGCCAAGTTGGTTAAGGC GTGCGACTGT chrVII:730980-731330 + 40 1.15e-08 AAGACTCCAT GGCCAAGTTGGTTAAGGC GTGCGACTGT chrVII:774184-774582 + 24 1.15e-08 TTGGGCGTGT GGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXII:656855-657144 - 32 1.15e-08 TTGGGCGTGT GGCGTAGTCGGTAGCGCG CTCCCTTAGC chrVI:137336-137704 - 64 1.15e-08 CTGACTCCAT GGCCAAGTTGGTTAAGGC GTGCGACTGT chrIV:410234-410507 + 67 1.15e-08 TTGGGCGTGT GGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXII:875233-875545 + 45 3.70e-08 CATCCTTGTT AGCTCAGTTGGTAGAGCG TTCGGCTTTT chrVII:115334-115676 + 41 3.70e-08 CATCCTTGTT AGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXV:438492-438858 + 26 3.70e-08 CATCCTTGTT AGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXVI:769106-769475 - 37 3.70e-08 CATCCTTGTT AGCTCAGTTGGTAGAGCG TTCGGCTTTT chrIV:1352385-1352659 - 41 6.55e-08 TAGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrIX:300146-300477 - 14 6.55e-08 TAGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrV:435666-435953 - 40 6.55e-08 GAGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrIII:151216-151515 - 16 6.55e-08 GAGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrXIII:480499-480849 - 44 6.55e-08 TAGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrVII:122132-122473 + 25 6.55e-08 TAGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrXVI:581901-582211 + 64 6.55e-08 GAGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrVI:226575-226867 - 64 6.55e-08 ATGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrIV:1201586-1201930 + 50 6.55e-08 TAGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrX:414813-414913 + 39 6.55e-08 TAGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrVII:185608-185931 - 42 6.55e-08 TAGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrV:135287-135612 - 73 6.55e-08 AAGCCTTGTT GGCGCAATCGGTAGCGCG TATGACTCTT chrXIV:442870-443199 + 30 1.22e-07 GTGGTTGTTT GGCCGAGCGGTCTAAGGC GCCTGATTCA chrVII:422921-423291 + 44 1.22e-07 GTGGTTGTTT GGCCGAGCGGTCTAAGGC GCCTGATTCA chrXII:628222-628603 + 29 1.22e-07 GTGGTTGTTT GGCCGAGCGGTCTAAGGC GCCTGATTCA chrVII:205354-205710 + 47 1.22e-07 GTGGTTGTTT GGCCGAGCGGTCTAAGGC GCCTGATTCA chrIII:90752-91061 + 11 1.22e-07 TTGGTTGTTT GGCCGAGCGGTCTAAGGC GCCTGATTCA chrVII:857324-857629 - 40 1.22e-07 GTGGTTGTTT GGCCGAGCGGTCTAAGGC GCCTGATTCA chrXIII:504725-505087 + 47 1.22e-07 GTGGTTGTTT GGCCGAGCGGTCTAAGGC GCCTGATTCA chrVII:823342-823665 + 37 2.15e-07 GTGGTTTCGT GGTCTAGTCGGTTATGGC ATCTGCTTAA chrVII:412201-412522 - 31 2.15e-07 CTGGTTTCGT GGTCTAGTCGGTTATGGC ATCTGCTTAA chrV:469299-469596 + 68 2.15e-07 TTGGTTTCGT GGTCTAGTCGGTTATGGC ATCTGCTTAA chrXV:663720-664034 - 33 2.15e-07 GTGGTTTCGT GGTCTAGTCGGTTATGGC ATCTGCTTAA chrXI:308067-308356 - 31 2.15e-07 GTGGTTTCGT GGTCTAGTCGGTTATGGC ATCTGCTTAA chrXI:379527-379836 + 57 2.15e-07 TAGGTTTCGT GGTCTAGTCGGTTATGGC ATCTGCTTAA chrIV:1095250-1095615 - 54 2.15e-07 TAGCGGACTT AGCTCAGTTGGGAGAGCG CCAGACTGAA chrX:378194-378294 + 68 2.15e-07 TAGGTTTCGT GGTCTAGTCGGTTATGGC ATCTGCTTAA chrV:438556-438855 + 53 2.15e-07 TAGGTTTCGT GGTCTAGTCGGTTATGGC ATCTGCTTAA chrXVI:560074-560423 - 66 2.15e-07 GAGCGGATTT AGCTCAGTTGGGAGAGCG CCAGACTGAA chrVI:157867-158167 - 15 2.15e-07 AAGCGGATTT AGCTCAGTTGGGAGAGCG CCAGACTGAA chrVII:440633-440969 - 31 2.15e-07 ATGCGGATTT AGCTCAGTTGGGAGAGCG CCAGACTGAA chrXIII:420495-420815 - 31 2.15e-07 CAGGTTTCGT GGTCTAGTCGGTTATGGC ATCTGCTTAA chrXIII:372369-372648 - 35 2.15e-07 CTGGTTTCGT GGTCTAGTCGGTTATGGC ATCTGCTTAA chrVIII:237744-238101 - 42 2.15e-07 AAGCGGATTT AGCTCAGTTGGGAGAGCG CCAGACTGAA chrVIII:358396-358735 - 29 2.15e-07 AAGCGGATTT AGCTCAGTTGGGAGAGCG CCAGACTGAA chrXVI:622455-622804 - 27 2.15e-07 ATGCGGATTT AGCTCAGTTGGGAGAGCG CCAGACTGAA chrXIV:374752-375031 + 36 2.15e-07 AAGCGGACTT AGCTCAGTTGGGAGAGCG CCAGACTGAA chrIV:619845-620183 - 52 2.57e-07 TGTTCCTCGT GGCCCAATGGTCACGGCG TCTGGCTACG chrXII:374198-374529 + 50 2.57e-07 TGTTCCTCGT GGCCCAATGGTCACGGCG TCTGGCTACG chrXV:340196-340534 - 31 2.57e-07 TGTTCCTCGT GGCCCAATGGTCACGGCG TCTGGCTACG chrXI:490797-491116 + 70 2.57e-07 TGTTCCTCGT GGCCCAATGGTCACGGCG TCTGGCTACG chrX:233775-233875 + 72 2.57e-07 TGTTCCTCGT GGCCCAATGGTCACGGCG TCTGGCTACG chrV:61769-62105 - 48 7.15e-07 AAGCGCAAGT GGTTTAGTGGTAAAATCC AACGTTGCCA chrXV:282001-282322 + 61 7.15e-07 GCGCGCAAGT GGTTTAGTGGTAAAATCC AACGTTGCCA chrXV:226513-226840 - 30 7.15e-07 CAGCGCAAGT GGTTTAGTGGTAAAATCC AACGTTGCCA chrVII:930914-931170 - 6 7.15e-07 AAGCGCAAGT GGTTTAGTGGTAAAATCC AACGT chrXVI:572098-572468 + 44 7.15e-07 TCGCGCAAGT GGTTTAGTGGTAAAATCC AACGTTGCCA chrXVI:860211-860553 + 55 7.15e-07 AAGCGCAAGT GGTTTAGTGGTAAAATCC AACGTTGCCA chrIII:142623-142936 - 17 7.15e-07 TAGCGCAAGT GGTTTAGTGGTAAAATCC AACGTTGCCA chrVI:162068-162385 + 60 7.15e-07 AAGCGCAAGT GGTTTAGTGGTAAAATCC AACGTTGCCA chrIV:83391-83687 + 67 7.15e-07 TAGCGCAAGT GGTTTAGTGGTAAAATCC AACGTTGCCA chrVI:180789-181195 - 77 7.15e-07 GCAAGT GGTTTAGTGGTAAAATCC AACGTTGCCA chrIV:992678-992985 + 59 7.15e-07 GAGCGCAAGT GGTTTAGTGGTAAAATCC AACGTTGCCA chrVII:845486-845830 + 49 7.15e-07 AAGCGCAAGT GGTTTAGTGGTAAAATCC AACGTTGCCA chrX:396651-396751 - 20 7.15e-07 AAGCGCAAGT GGTTTAGTGGTAAAATCC AACGTTGCCA chrX:422785-422885 + 57 7.67e-07 ATGCTTCAGT AGCTCAGTAGGAAGAGCG TCAGTCTCAT chrXV:976355-976574 + 15 7.67e-07 GCGCTTCAGT AGCTCAGTAGGAAGAGCG TCAGTCTCAT chrXIII:572763-573114 - 42 7.67e-07 CAGCTTCAGT AGCTCAGTAGGAAGAGCG TCAGTCTCAT chrX:390952-391052 - 20 7.67e-07 GTGCTTCAGT AGCTCAGTAGGAAGAGCG TCAGTCTCAT chrIV:884225-884566 + 24 8.80e-07 ATGCTCGTGT AGCTCAGTGGTTAGAGCT TCGTGCTTAT chrXII:605200-605581 - 67 8.80e-07 ATGCTCGTGT AGCTCAGTGGTTAGAGCT TCGTGCTTAT chrXIII:195989-196317 - 42 2.81e-06 AAGGGCGTGT GGTCTAGTGGTATGATTC TCGCTTTGGG chrXII:92500-92667 + 23 2.81e-06 AAGGGCGTGT GGTCTAGTGGTATGATTC TCGCTTTGGG chrXV:300929-301306 + 38 2.81e-06 TCGGGCGTGT GGTCTAGTGGTATGATTC TCGCTTTGGG chrXIV:568001-568312 + 17 2.81e-06 TCGGGCGTGT GGTCTAGTGGTATGATTC TCGCTTTGGG chrXV:464358-464632 + 13 2.81e-06 AAGGGCGTGT GGTCTAGTGGTATGATTC TCGCTTTGGG chrVIII:388809-389163 - 34 2.81e-06 ATGGGCGTGT GGTCTAGTGGTATGATTC TCGCTTTGGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCBAGTKGKTWRAGSS MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:227782-228143 2.9e-10 37_[+1]_45 chrV:288334-288682 2.9e-10 40_[-1]_42 chrVIII:132957-133275 2.9e-10 15_[-1]_67 chrXVI:689407-689772 2.9e-10 33_[+1]_49 chrIV:1305469-1305792 2.9e-10 57_[+1]_25 chrVI:191476-191736 2.9e-10 31_[-1]_51 chrXII:167871-168182 2.9e-10 23_[-1]_59 chrV:86427-86773 2.9e-10 61_[+1]_21 chrII:226950-227264 2.9e-10 25_[+1]_57 chrIX:248667-249045 2.9e-10 51_[+1]_31 chrX:523912-524012 2.9e-10 33_[-1]_49 chrXII:784200-784537 2.9e-10 43_[+1]_39 chrXV:274504-274880 2.9e-10 38_[+1]_44 chrIV:1150733-1151111 2.9e-10 43_[-1]_39 chrXIII:259057-259402 2.9e-10 34_[-1]_48 chrIV:437605-437941 2.9e-10 56_[+1]_26 chrXVI:819366-819684 1.1e-09 61_[+1]_21 chrII:197328-197628 1.1e-09 73_[+1]_9 chrIX:183365-183667 1.1e-09 21_[-1]_61 chrV:551223-551467 1.1e-09 37_[-1]_45 chrXII:1052009-1052227 1.1e-09 50_[-1]_32 chrVII:738967-739279 1.1e-09 56_[+1]_26 chrXIV:602244-602475 1.1e-09 10_[+1]_72 chrXIV:569801-569987 1.1e-09 70_[-1]_12 chrXII:734651-734958 1.1e-09 55_[+1]_27 chrV:443130-443382 1.1e-09 43_[-1]_39 chrX:617750-617850 1.9e-09 64_[+1]_18 chrXII:731980-732272 1.9e-09 21_[+1]_61 chrXII:592436-592743 1.9e-09 54_[-1]_28 chrX:59040-59140 2.8e-09 20_[-1]_62 chrIV:434190-434437 2.8e-09 47_[-1]_35 chrVIII:116011-116347 2.8e-09 24_[-1]_58 chrIX:325589-325920 2.8e-09 51_[+1]_31 chrXV:113656-113942 2.8e-09 60_[+1]_22 chrXIV:560603-560822 2.8e-09 77_[-1]_5 chrIII:295379-295611 2.8e-09 46_[+1]_36 chrXV:353940-354265 2.8e-09 35_[-1]_47 chrV:311911-312245 3.9e-09 41_[-1]_41 chrXII:214783-215088 3.9e-09 44_[-1]_38 chrI:166141-166451 3.9e-09 28_[+1]_54 chrVII:794274-794568 3.9e-09 53_[+1]_29 chrXII:962904-963207 9.9e-09 24_[-1]_58 chrII:9442-9716 9.9e-09 61_[+1]_21 chrXI:84060-84355 9.9e-09 58_[+1]_24 chrX:424353-424453 9.9e-09 21_[-1]_61 chrXIV:726080-726313 9.9e-09 45_[-1]_37 chrXIV:632468-632735 1.1e-08 55_[+1]_27 chrX:197212-197312 1.1e-08 34_[-1]_48 chrXVI:810546-810822 1.1e-08 49_[+1]_33 chrIII:127559-127876 1.1e-08 56_[+1]_26 chrXI:517822-518125 1.1e-08 72_[+1]_10 chrXIV:102572-102911 1.1e-08 32_[+1]_50 chrXV:228167-228472 1.1e-08 69_[+1]_13 chrXI:74476-74790 1.1e-08 48_[+1]_34 chrVII:730980-731330 1.1e-08 39_[+1]_43 chrVII:774184-774582 1.1e-08 23_[+1]_59 chrXII:656855-657144 1.1e-08 31_[-1]_51 chrVI:137336-137704 1.1e-08 63_[-1]_19 chrIV:410234-410507 1.1e-08 66_[+1]_16 chrXII:875233-875545 3.7e-08 44_[+1]_38 chrVII:115334-115676 3.7e-08 40_[+1]_42 chrXV:438492-438858 3.7e-08 25_[+1]_57 chrXVI:769106-769475 3.7e-08 36_[-1]_46 chrIV:1352385-1352659 6.6e-08 40_[-1]_42 chrIX:300146-300477 6.6e-08 13_[-1]_69 chrV:435666-435953 6.6e-08 39_[-1]_43 chrIII:151216-151515 6.6e-08 15_[-1]_67 chrXIII:480499-480849 6.6e-08 43_[-1]_39 chrVII:122132-122473 6.6e-08 24_[+1]_58 chrXVI:581901-582211 6.6e-08 63_[+1]_19 chrVI:226575-226867 6.6e-08 63_[-1]_19 chrIV:1201586-1201930 6.6e-08 49_[+1]_33 chrX:414813-414913 6.6e-08 38_[+1]_44 chrVII:185608-185931 6.6e-08 41_[-1]_41 chrV:135287-135612 6.6e-08 72_[-1]_10 chrXIV:442870-443199 1.2e-07 29_[+1]_53 chrVII:422921-423291 1.2e-07 43_[+1]_39 chrXII:628222-628603 1.2e-07 28_[+1]_54 chrVII:205354-205710 1.2e-07 46_[+1]_36 chrIII:90752-91061 1.2e-07 10_[+1]_72 chrVII:857324-857629 1.2e-07 39_[-1]_43 chrXIII:504725-505087 1.2e-07 46_[+1]_36 chrVII:823342-823665 2.2e-07 36_[+1]_46 chrVII:412201-412522 2.2e-07 30_[-1]_52 chrV:469299-469596 2.2e-07 67_[+1]_15 chrXV:663720-664034 2.2e-07 32_[-1]_50 chrXI:308067-308356 2.2e-07 30_[-1]_52 chrXI:379527-379836 2.2e-07 56_[+1]_26 chrIV:1095250-1095615 2.2e-07 53_[-1]_29 chrX:378194-378294 2.2e-07 67_[+1]_15 chrV:438556-438855 2.2e-07 52_[+1]_30 chrXVI:560074-560423 2.2e-07 65_[-1]_17 chrVI:157867-158167 2.2e-07 14_[-1]_68 chrVII:440633-440969 2.2e-07 30_[-1]_52 chrXIII:420495-420815 2.2e-07 30_[-1]_52 chrXIII:372369-372648 2.2e-07 34_[-1]_48 chrVIII:237744-238101 2.2e-07 41_[-1]_41 chrVIII:358396-358735 2.2e-07 28_[-1]_54 chrXVI:622455-622804 2.2e-07 26_[-1]_56 chrXIV:374752-375031 2.2e-07 35_[+1]_47 chrIV:619845-620183 2.6e-07 51_[-1]_31 chrXII:374198-374529 2.6e-07 49_[+1]_33 chrXV:340196-340534 2.6e-07 30_[-1]_52 chrXI:490797-491116 2.6e-07 69_[+1]_13 chrX:233775-233875 2.6e-07 71_[+1]_11 chrV:61769-62105 7.1e-07 47_[-1]_35 chrXV:282001-282322 7.1e-07 60_[+1]_22 chrXV:226513-226840 7.1e-07 29_[-1]_53 chrVII:930914-931170 7.1e-07 5_[-1]_77 chrXVI:572098-572468 7.1e-07 43_[+1]_39 chrXVI:860211-860553 7.1e-07 54_[+1]_28 chrIII:142623-142936 7.1e-07 16_[-1]_66 chrVI:162068-162385 7.1e-07 59_[+1]_23 chrIV:83391-83687 7.1e-07 66_[+1]_16 chrVI:180789-181195 7.1e-07 76_[-1]_6 chrIV:992678-992985 7.1e-07 58_[+1]_24 chrVII:845486-845830 7.1e-07 48_[+1]_34 chrX:396651-396751 7.1e-07 19_[-1]_63 chrX:422785-422885 7.7e-07 56_[+1]_26 chrXV:976355-976574 7.7e-07 14_[+1]_68 chrXIII:572763-573114 7.7e-07 41_[-1]_41 chrX:390952-391052 7.7e-07 19_[-1]_63 chrIV:884225-884566 8.8e-07 23_[+1]_59 chrXII:605200-605581 8.8e-07 66_[-1]_16 chrXIII:195989-196317 2.8e-06 41_[-1]_41 chrXII:92500-92667 2.8e-06 22_[+1]_60 chrXV:300929-301306 2.8e-06 37_[+1]_45 chrXIV:568001-568312 2.8e-06 16_[+1]_66 chrXV:464358-464632 2.8e-06 12_[+1]_70 chrVIII:388809-389163 2.8e-06 33_[-1]_49 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCBAGTKGKTWRAGSS MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGCCBAGTKGKTWRAGSS width=18 seqs=130 chrIII:227782-228143 ( 38) GGCCGAGTGGTTAAGGCG 1 chrV:288334-288682 ( 41) GGCCGAGTGGTTAAGGCG 1 chrVIII:132957-133275 ( 16) GGCCGAGTGGTTAAGGCG 1 chrXVI:689407-689772 ( 34) GGCCGAGTGGTTAAGGCG 1 chrIV:1305469-1305792 ( 58) GGCCGAGTGGTTAAGGCG 1 chrVI:191476-191736 ( 32) GGCCGAGTGGTTAAGGCG 1 chrXII:167871-168182 ( 24) GGCCGAGTGGTTAAGGCG 1 chrV:86427-86773 ( 62) GGCCGAGTGGTTAAGGCG 1 chrII:226950-227264 ( 26) GGCCGAGTGGTTAAGGCG 1 chrIX:248667-249045 ( 52) GGCCGAGTGGTTAAGGCG 1 chrX:523912-524012 ( 34) GGCCGAGTGGTTAAGGCG 1 chrXII:784200-784537 ( 44) GGCCGAGTGGTTAAGGCG 1 chrXV:274504-274880 ( 39) GGCCGAGTGGTTAAGGCG 1 chrIV:1150733-1151111 ( 44) GGCCGAGTGGTTAAGGCG 1 chrXIII:259057-259402 ( 35) GGCCGAGTGGTTAAGGCG 1 chrIV:437605-437941 ( 57) GGCCGAGTGGTTAAGGCG 1 chrXVI:819366-819684 ( 62) GGCCCAGTTGGTTAAGGC 1 chrII:197328-197628 ( 74) GGCCCAGTTGGTTAAGGC 1 chrIX:183365-183667 ( 22) GGCCCAGTTGGTTAAGGC 1 chrV:551223-551467 ( 38) GGCCCAGTTGGTTAAGGC 1 chrXII:1052009-1052227 ( 51) GGCCCAGTTGGTTAAGGC 1 chrVII:738967-739279 ( 57) GGCCCAGTTGGTTAAGGC 1 chrXIV:602244-602475 ( 11) GGCCCAGTTGGTTAAGGC 1 chrXIV:569801-569987 ( 71) GGCCCAGTTGGTTAAGGC 1 chrXII:734651-734958 ( 56) GGCCCAGTTGGTTAAGGC 1 chrV:443130-443382 ( 44) GGCCCAGTTGGTTAAGGC 1 chrX:617750-617850 ( 65) GGCCGAGTGGTTTAAGGC 1 chrXII:731980-732272 ( 22) GGCCGAGTGGTTTAAGGC 1 chrXII:592436-592743 ( 55) GGCCGAGTGGTTTAAGGC 1 chrX:59040-59140 ( 21) GGCCAAGTTGGTAAGGCG 1 chrIV:434190-434437 ( 48) GGCCAAGTTGGTAAGGCG 1 chrVIII:116011-116347 ( 25) GGCCAAGTTGGTAAGGCG 1 chrIX:325589-325920 ( 52) GGCCAAGTTGGTAAGGCG 1 chrXV:113656-113942 ( 61) GGCCAAGTTGGTAAGGCG 1 chrXIV:560603-560822 ( 78) GGCCAAGTTGGTAAGGCG 1 chrIII:295379-295611 ( 47) GGCCAAGTTGGTAAGGCG 1 chrXV:353940-354265 ( 36) GGCCAAGTTGGTAAGGCG 1 chrV:311911-312245 ( 42) GGCGCAGTTGGTAGCGCG 1 chrXII:214783-215088 ( 45) GGCGCAGTTGGTAGCGCG 1 chrI:166141-166451 ( 29) GGCGCAGTTGGTAGCGCG 1 chrVII:794274-794568 ( 54) GGCGCAGTTGGTAGCGCG 1 chrXII:962904-963207 ( 25) GGCCGAGTGGTCTAAGGC 1 chrII:9442-9716 ( 62) GGCCGAGTGGTCTAAGGC 1 chrXI:84060-84355 ( 59) GGCCGAGTGGTCTAAGGC 1 chrX:424353-424453 ( 22) GGCCGAGTGGTCTAAGGC 1 chrXIV:726080-726313 ( 46) GGCCGAGTGGTCTAAGGC 1 chrXIV:632468-632735 ( 56) GGCCAAGTTGGTTAAGGC 1 chrX:197212-197312 ( 35) GGCGTAGTCGGTAGCGCG 1 chrXVI:810546-810822 ( 50) GGCCAAGTTGGTTAAGGC 1 chrIII:127559-127876 ( 57) GGCCAAGTTGGTTAAGGC 1 chrXI:517822-518125 ( 73) GGCGTAGTCGGTAGCGCG 1 chrXIV:102572-102911 ( 33) GGCCAAGTTGGTTAAGGC 1 chrXV:228167-228472 ( 70) GGCCAAGTTGGTTAAGGC 1 chrXI:74476-74790 ( 49) GGCCAAGTTGGTTAAGGC 1 chrVII:730980-731330 ( 40) GGCCAAGTTGGTTAAGGC 1 chrVII:774184-774582 ( 24) GGCGTAGTCGGTAGCGCG 1 chrXII:656855-657144 ( 32) GGCGTAGTCGGTAGCGCG 1 chrVI:137336-137704 ( 64) GGCCAAGTTGGTTAAGGC 1 chrIV:410234-410507 ( 67) GGCGTAGTCGGTAGCGCG 1 chrXII:875233-875545 ( 45) AGCTCAGTTGGTAGAGCG 1 chrVII:115334-115676 ( 41) AGCTCAGTTGGTAGAGCG 1 chrXV:438492-438858 ( 26) AGCTCAGTTGGTAGAGCG 1 chrXVI:769106-769475 ( 37) AGCTCAGTTGGTAGAGCG 1 chrIV:1352385-1352659 ( 41) GGCGCAATCGGTAGCGCG 1 chrIX:300146-300477 ( 14) GGCGCAATCGGTAGCGCG 1 chrV:435666-435953 ( 40) GGCGCAATCGGTAGCGCG 1 chrIII:151216-151515 ( 16) GGCGCAATCGGTAGCGCG 1 chrXIII:480499-480849 ( 44) GGCGCAATCGGTAGCGCG 1 chrVII:122132-122473 ( 25) GGCGCAATCGGTAGCGCG 1 chrXVI:581901-582211 ( 64) GGCGCAATCGGTAGCGCG 1 chrVI:226575-226867 ( 64) GGCGCAATCGGTAGCGCG 1 chrIV:1201586-1201930 ( 50) GGCGCAATCGGTAGCGCG 1 chrX:414813-414913 ( 39) GGCGCAATCGGTAGCGCG 1 chrVII:185608-185931 ( 42) GGCGCAATCGGTAGCGCG 1 chrV:135287-135612 ( 73) GGCGCAATCGGTAGCGCG 1 chrXIV:442870-443199 ( 30) GGCCGAGCGGTCTAAGGC 1 chrVII:422921-423291 ( 44) GGCCGAGCGGTCTAAGGC 1 chrXII:628222-628603 ( 29) GGCCGAGCGGTCTAAGGC 1 chrVII:205354-205710 ( 47) GGCCGAGCGGTCTAAGGC 1 chrIII:90752-91061 ( 11) GGCCGAGCGGTCTAAGGC 1 chrVII:857324-857629 ( 40) GGCCGAGCGGTCTAAGGC 1 chrXIII:504725-505087 ( 47) GGCCGAGCGGTCTAAGGC 1 chrVII:823342-823665 ( 37) GGTCTAGTCGGTTATGGC 1 chrVII:412201-412522 ( 31) GGTCTAGTCGGTTATGGC 1 chrV:469299-469596 ( 68) GGTCTAGTCGGTTATGGC 1 chrXV:663720-664034 ( 33) GGTCTAGTCGGTTATGGC 1 chrXI:308067-308356 ( 31) GGTCTAGTCGGTTATGGC 1 chrXI:379527-379836 ( 57) GGTCTAGTCGGTTATGGC 1 chrIV:1095250-1095615 ( 54) AGCTCAGTTGGGAGAGCG 1 chrX:378194-378294 ( 68) GGTCTAGTCGGTTATGGC 1 chrV:438556-438855 ( 53) GGTCTAGTCGGTTATGGC 1 chrXVI:560074-560423 ( 66) AGCTCAGTTGGGAGAGCG 1 chrVI:157867-158167 ( 15) AGCTCAGTTGGGAGAGCG 1 chrVII:440633-440969 ( 31) AGCTCAGTTGGGAGAGCG 1 chrXIII:420495-420815 ( 31) GGTCTAGTCGGTTATGGC 1 chrXIII:372369-372648 ( 35) GGTCTAGTCGGTTATGGC 1 chrVIII:237744-238101 ( 42) AGCTCAGTTGGGAGAGCG 1 chrVIII:358396-358735 ( 29) AGCTCAGTTGGGAGAGCG 1 chrXVI:622455-622804 ( 27) AGCTCAGTTGGGAGAGCG 1 chrXIV:374752-375031 ( 36) AGCTCAGTTGGGAGAGCG 1 chrIV:619845-620183 ( 52) GGCCCAATGGTCACGGCG 1 chrXII:374198-374529 ( 50) GGCCCAATGGTCACGGCG 1 chrXV:340196-340534 ( 31) GGCCCAATGGTCACGGCG 1 chrXI:490797-491116 ( 70) GGCCCAATGGTCACGGCG 1 chrX:233775-233875 ( 72) GGCCCAATGGTCACGGCG 1 chrV:61769-62105 ( 48) GGTTTAGTGGTAAAATCC 1 chrXV:282001-282322 ( 61) GGTTTAGTGGTAAAATCC 1 chrXV:226513-226840 ( 30) GGTTTAGTGGTAAAATCC 1 chrVII:930914-931170 ( 6) GGTTTAGTGGTAAAATCC 1 chrXVI:572098-572468 ( 44) GGTTTAGTGGTAAAATCC 1 chrXVI:860211-860553 ( 55) GGTTTAGTGGTAAAATCC 1 chrIII:142623-142936 ( 17) GGTTTAGTGGTAAAATCC 1 chrVI:162068-162385 ( 60) GGTTTAGTGGTAAAATCC 1 chrIV:83391-83687 ( 67) GGTTTAGTGGTAAAATCC 1 chrVI:180789-181195 ( 77) GGTTTAGTGGTAAAATCC 1 chrIV:992678-992985 ( 59) GGTTTAGTGGTAAAATCC 1 chrVII:845486-845830 ( 49) GGTTTAGTGGTAAAATCC 1 chrX:396651-396751 ( 20) GGTTTAGTGGTAAAATCC 1 chrX:422785-422885 ( 57) AGCTCAGTAGGAAGAGCG 1 chrXV:976355-976574 ( 15) AGCTCAGTAGGAAGAGCG 1 chrXIII:572763-573114 ( 42) AGCTCAGTAGGAAGAGCG 1 chrX:390952-391052 ( 20) AGCTCAGTAGGAAGAGCG 1 chrIV:884225-884566 ( 24) AGCTCAGTGGTTAGAGCT 1 chrXII:605200-605581 ( 67) AGCTCAGTGGTTAGAGCT 1 chrXIII:195989-196317 ( 42) GGTCTAGTGGTATGATTC 1 chrXII:92500-92667 ( 23) GGTCTAGTGGTATGATTC 1 chrXV:300929-301306 ( 38) GGTCTAGTGGTATGATTC 1 chrXIV:568001-568312 ( 17) GGTCTAGTGGTATGATTC 1 chrXV:464358-464632 ( 13) GGTCTAGTGGTATGATTC 1 chrVIII:388809-389163 ( 34) GGTCTAGTGGTATGATTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCBAGTKGKTWRAGSS MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 18 n= 49457 bayes= 10.3148 E= 1.3e-367 -114 -1367 215 -1367 -1367 -1367 236 -1367 -1367 200 -1367 -45 -1367 163 -27 -36 -131 96 30 -23 171 -1367 -1367 -1367 -122 -1367 216 -1367 -1367 -185 -1367 163 -331 10 117 8 -1367 -1367 236 -1367 -1367 -1367 153 52 -79 -57 -166 104 103 -1367 -1367 30 101 -234 83 -1367 82 -27 20 -199 -1367 -1367 214 -106 -1367 168 77 -273 -1367 130 139 -431 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCBAGTKGKTWRAGSS MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 18 nsites= 130 E= 1.3e-367 0.138462 0.000000 0.861538 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.776923 0.000000 0.223077 0.000000 0.600000 0.161538 0.238462 0.123077 0.376923 0.238462 0.261538 1.000000 0.000000 0.000000 0.000000 0.130769 0.000000 0.869231 0.000000 0.000000 0.053846 0.000000 0.946154 0.030769 0.207692 0.438462 0.323077 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.561538 0.438462 0.176923 0.130769 0.061538 0.630769 0.623077 0.000000 0.000000 0.376923 0.615385 0.038462 0.346154 0.000000 0.538462 0.161538 0.223077 0.076923 0.000000 0.000000 0.853846 0.146154 0.000000 0.623077 0.330769 0.046154 0.000000 0.476923 0.507692 0.015385 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCBAGTKGKTWRAGSS MEME-1 regular expression -------------------------------------------------------------------------------- GG[CT][CT][CTG]AGT[GTC]G[GT]T[AT][AG][AG]G[CG][GC] -------------------------------------------------------------------------------- Time 350.82 secs. ******************************************************************************** ******************************************************************************** MOTIF TAAYCVDRRGRTCMBSGGTTCGAY MEME-2 width = 24 sites = 79 llr = 1348 E-value = 8.6e-245 ******************************************************************************** -------------------------------------------------------------------------------- Motif TAAYCVDRRGRTCMBSGGTTCGAY MEME-2 Description -------------------------------------------------------------------------------- Simplified A :68::3246253:4::2::::2a2 pos.-specific C 22:3721::1:18443::::a::3 probability G :2123445475::2358a:::8:2 matrix T 7:15:131:::62:31::aa:::4 bits 2.4 * * 2.1 * * 1.9 * * 1.7 **** * Relative 1.4 * * ******* Entropy 1.2 * * * ******* (24.6 bits) 0.9 * *** * ******* 0.7 * * * *** * ******** 0.5 ***** **************** 0.2 *********************** 0.0 ------------------------ Multilevel TAATCGGGAGGTCCCGGGTTCGAT consensus C CGATAG AATAGC A C sequence CA T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAYCVDRRGRTCMBSGGTTCGAY MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------ chrV:551223-551467 - 4 3.03e-11 ACCGTGCTAA TAACGCGGGGATCAGCGGTTCGAT CCC chrXII:1052009-1052227 - 17 3.03e-11 ACCGTGCTAA TAACGCGGGGATCAGCGGTTCGAT CCCGCTAGAG chrXIV:602244-602475 + 39 3.03e-11 ACCGTGCTAA TAACGCGGGGATCAGCGGTTCGAT CCCGCTAGAG chrXIV:569801-569987 - 37 3.03e-11 ACCGTGCTAA TAACGCGGGGATCAGCGGTTCGAT CCCGCTAGAG chrIX:210656-210830 + 8 3.03e-11 GTGCTAA TAACGCGGGGATCAGCGGTTCGAT CCCGCTAGAG chrIV:667887-668113 - 71 3.03e-11 TGCTAA TAACGCGGGGATCAGCGGTTCGAT CCCGCTAGAG chrV:443130-443382 - 10 3.03e-11 ACCGTGCTAA TAACGCGGGGATCAGCGGTTCGAT CCCGCTAGA chrXI:140896-141242 - 13 2.76e-10 CATCACGCTT TCACCGTGGAGACCGGGGTTCGAC TCCCCGTATC chrXVI:210060-210422 - 15 2.76e-10 CATCACGCTT TCACCGTGGAGACCGGGGTTCGAC TCCCCGTATC chrV:487248-487524 - 9 2.76e-10 CATCACGCTT TCACCGTGGAGACCGGGGTTCGAC TCCCCGTA chrVII:328428-328862 + 22 2.76e-10 CATCACGCTT TCACCGTGGAGACCGGGGTTCGAC TCCCCGTATC chrV:176936-177309 + 61 2.76e-10 CATCACGCTT TCACCGTGGAGACCGGGGTTCGAC TCCCCGTATC chrVII:541691-542067 + 55 2.76e-10 CATCACGCTT TCACCGTGGAGACCGGGGTTCGAC TCCCCGTATC chrIII:82434-82590 - 14 2.76e-10 CATCACGCTT TCACCGTGGAGACCGGGGTTCGAC TCCCCGTATC chrVII:401463-401624 - 48 2.76e-10 CATCACGCTT TCACCGTGGAGACCGGGGTTCGAC TCCCCGTATC chrII:405711-406118 + 48 3.72e-10 GTCTGACTTC TAATCAGAAGATTATGGGTTCGAC CCCCATCGTG chrV:138501-138913 + 43 3.72e-10 GTCTGACTTC TAATCAGAAGATTATGGGTTCGAC CCCCATCGTG chrX:355205-355305 + 41 3.72e-10 GTCTGACTTC TAATCAGAAGATTATGGGTTCGAC CCCCATCGTG chrIV:568727-569106 + 50 3.72e-10 GTCTGACTTC TAATCAGAAGATTATGGGTTCGAC CCCCATCGTG chrVII:405418-405675 + 8 3.72e-10 TGACTTC TAATCAGAAGATTATGGGTTCGAC CCCCATCGTG chrVII:736168-736543 + 69 3.72e-10 GTCTGACTTC TAATCAGAAGATTATGGGTTCGAC CCCCATCG chrXI:162384-162698 - 10 3.72e-10 GTCTGACTTC TAATCAGAAGATTATGGGTTCGAC CCCCATCGT chrIV:1352385-1352659 - 8 5.71e-10 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAG CCCCCTA chrV:435666-435953 - 7 5.71e-10 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAG CCCCCT chrXIII:480499-480849 - 11 5.71e-10 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAG CCCCCTACAG chrVII:122132-122473 + 52 5.71e-10 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAG CCCCCTACAG chrVI:226575-226867 - 31 5.71e-10 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAG CCCCCTACAG chrX:414813-414913 + 66 5.71e-10 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAG CCCCCTACAG chrVII:185608-185931 - 9 5.71e-10 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAG CCCCCTAC chrV:135287-135612 - 40 5.71e-10 GTATGACTCT TAATCATAAGGTTAGGGGTTCGAG CCCCCTACAG chrV:61769-62105 - 17 9.82e-10 TCCAACGTTG CCATCGTTGGGCCCCCGGTTCGAT TCCGGGCTTG chrV:311911-312245 - 9 9.82e-10 GCTTCCCTTG CAAGGAAGAGGTCATCGGTTCGAT TCCGGTTG chrXII:214783-215088 - 12 9.82e-10 GCTTCCCTTG CAAGGAAGAGGTCATCGGTTCGAT TCCGGTTGCG chrI:166141-166451 + 56 9.82e-10 GCTTCCCTTG CAAGGAAGAGGTCATCGGTTCGAT TCCGGTTGCG chrXVI:572098-572468 + 69 9.82e-10 TCCAACGTTG CCATCGTTGGGCCCCCGGTTCGAT TCCGGGCT chrVI:180789-181195 - 46 9.82e-10 TCCAACGTTG CCATCGTTGGGCCCCCGGTTCGAT TCCGGGCTTG chrVII:845486-845830 + 74 9.82e-10 TCCAACGTTG CCATCGTTGGGCCCCCGGTTCGAT TCC chrVIII:134171-134490 + 75 3.36e-09 CTTTCGGTTT TGATCCGGACAACCCCGGTTCGAA TC chrIV:645104-645218 - 56 3.36e-09 CTTTCGGTTT TGATCCGGACAACCCCGGTTCGAA TCCGGGTAGG chrXII:448536-448883 - 5 3.36e-09 CTTTCGGTTT TGATCCGGACAACCCCGGTTCGAA TCCG chrIV:802622-802874 - 47 3.36e-09 CTTTCGGTTT TGATCCGGACAACCCCGGTTCGAA TCCGGGTAGG chrXIV:631770-632040 - 5 4.22e-09 TCTCGCTTAG GGTGCGGGAGGTCCCGGGTTCGAG TCCC chrXIV:96122-96459 - 15 4.22e-09 TCCCACCCTT CCAAGGTGGGGACACGGGTTCGAT TCTCGTACCG chrXV:110868-111125 - 30 4.22e-09 TCCCACCCTT CCAAGGTGGGGACACGGGTTCGAT TCTCGTACCG chrIII:123461-123793 - 14 4.22e-09 TCTCGCTTAG GGTGCGGGAGGTCCCGGGTTCGAG TCCCGGCTCG chrIV:434190-434437 - 15 8.06e-09 GCCACACTAG TAATGTGGAGATCATCGGTTCAAA TCCGATTGGA chrXIV:560603-560822 - 45 8.06e-09 GCCACACTAG TAATGTGGAGATCATCGGTTCAAA TCCGATTGGA chrIII:295379-295611 + 74 8.06e-09 GCCACACTAG TAATGTGGAGATCATCGGTTCAAA TCC chrXV:353940-354265 - 3 8.06e-09 GCCACACTAG TAATGTGGAGATCATCGGTTCAAA TC chrX:538432-538532 + 66 1.47e-08 GTCTCCCTCC TAAGGAGAAGACTGCGGGTTCGAG TCCCGTACGG chrXIV:568001-568312 + 74 1.78e-08 GAAGACAAAG CATGCGAGAGGCCCTGGGTTCAAT TCC chrVI:101374-101547 + 31 1.78e-08 GAAGACAAAG CATGCGAGAGGCCCTGGGTTCAAT TCCCAGCTCG chrXV:464358-464632 + 69 1.78e-08 GAAGACAAAG CATGCGAGAGGCCCTGGGTTCAAT TCCCAGCT chrXIV:102572-102911 + 61 2.15e-08 GTGCGACTGT TAATCGCAAGATCGTGAGTTCAAC CCTCACTGGG chrVII:730980-731330 + 68 2.15e-08 GTGCGACTGT TAATCGCAAGATCGTGAGTTCAAC CCTCACTGG chrXII:975879-976104 - 56 2.15e-08 GTGCGACTGT TAATCGCAAGATCGTGAGTTCAAC CCTCACTGGG chrVI:137336-137704 - 30 2.15e-08 GTGCGACTGT TAATCGCAAGATCGTGAGTTCAAC CCTCACTGGG chrXVI:856896-857062 + 8 3.36e-08 CCCTTAG CATGGGAGAGGTCTCCGGTTCGAT TCCGGACTCG chrVII:774184-774582 + 51 3.36e-08 GCTCCCTTAG CATGGGAGAGGTCTCCGGTTCGAT TCCGGACTCG chrXIII:808137-808467 - 8 4.35e-08 CTTTCGGTTC TGATCCGAACAACCCCAGTTCGAA TCCGGGT chrXV:976355-976574 + 42 5.58e-08 GTCAGTCTCA TAATCTGAAGGTCGAGAGTTCGAA CCTCCCCTGG chrXIII:572763-573114 - 9 5.58e-08 GTCAGTCTCA TAATCTGAAGGTCGAGAGTTCGAA CCTCCCCT chrIV:488577-489028 - 59 7.68e-08 GTCGCCTTTA CACGGCGAAGATCCCGAGTTCGAA CCTCGGTTGG chrXVI:56085-56370 - 6 7.68e-08 AATAAGATTG CAATCGAAGGGTTGCAGGTTCAAT TCCTG chrVIII:466907-467126 + 58 7.68e-08 GTTGCACTTG TAATGCAAAGGTCGCTAGTTCAAT TCTGGCAGGT chrVII:1004081-1004370 + 75 1.12e-07 GTTGCACTTG TAATGCAAAGGTCGTTAGTTCAAT TC chrXVI:744130-744468 + 69 1.12e-07 GTTGCACTTG TAATGCAAAGGTCGTTAGTTCAAT TCTGACAG chrVII:823342-823665 + 65 1.21e-07 ATCTGCTTAA CACGCAGAACGTCCCCAGTTCGAT CCTGGGCGAA chrXVI:560074-560423 - 14 1.21e-07 TTCGGTCAAG TTATCTGGAGGTCCTGTGTTCGAT CCACAGAATT chrX:354133-354233 + 72 1.40e-07 TACCACTACG AAATCTTGAGATCGGGCGTTCGAC TCGCC chrXIII:168704-169021 + 34 1.40e-07 TATCACTACG AAATCTTGAGATCGGGCGTTCGAC TCGCCCCCGG chrXI:313335-313581 - 7 1.61e-07 CACATCGTTG TGGCCGATGAAACCCTGGTTCGAT TCTAGG chrXIII:362933-363228 + 68 1.61e-07 CACATCGTTG TGGCCGATGAAACCCTGGTTCGAT TCTAGGAGA chrV:434384-434734 - 46 1.61e-07 CACATCGTTG TGGCCGATGAAACCCTGGTTCGAT TCTAGGAGAT chrVII:319747-319935 + 24 1.61e-07 CACATCGTTG TGGCCGATGAAACCCTGGTTCGAT TCTAGGAGAT chrVII:110437-110810 - 66 1.61e-07 CACATCGTTG TGGCCGATGAAACCCTGGTTCGAT TCTAGGAGAT chrIV:1256957-1257111 - 38 1.98e-07 TTCATGCTTC CCAAGCATGGGGCCCGGGTTCGAT TCCCGGCTTC chrIV:619845-620183 - 19 3.12e-07 GTCTGGCTAC GAACCAGAAGATTCCAGGTTCAAG TCCTGGCGGG chrXII:818484-818754 + 74 1.36e-06 TGCATTCTTC CGGTGGCTGTGATCCGGGTTCGAG TCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAYCVDRRGRTCMBSGGTTCGAY MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrV:551223-551467 3e-11 3_[-2]_73 chrXII:1052009-1052227 3e-11 16_[-2]_60 chrXIV:602244-602475 3e-11 38_[+2]_38 chrXIV:569801-569987 3e-11 36_[-2]_40 chrIX:210656-210830 3e-11 7_[+2]_69 chrIV:667887-668113 3e-11 70_[-2]_6 chrV:443130-443382 3e-11 9_[-2]_67 chrXI:140896-141242 2.8e-10 12_[-2]_64 chrXVI:210060-210422 2.8e-10 14_[-2]_62 chrV:487248-487524 2.8e-10 8_[-2]_68 chrVII:328428-328862 2.8e-10 21_[+2]_55 chrV:176936-177309 2.8e-10 60_[+2]_16 chrVII:541691-542067 2.8e-10 54_[+2]_22 chrIII:82434-82590 2.8e-10 13_[-2]_63 chrVII:401463-401624 2.8e-10 47_[-2]_29 chrII:405711-406118 3.7e-10 47_[+2]_29 chrV:138501-138913 3.7e-10 42_[+2]_34 chrX:355205-355305 3.7e-10 40_[+2]_36 chrIV:568727-569106 3.7e-10 49_[+2]_27 chrVII:405418-405675 3.7e-10 7_[+2]_69 chrVII:736168-736543 3.7e-10 68_[+2]_8 chrXI:162384-162698 3.7e-10 9_[-2]_67 chrIV:1352385-1352659 5.7e-10 7_[-2]_69 chrV:435666-435953 5.7e-10 6_[-2]_70 chrXIII:480499-480849 5.7e-10 10_[-2]_66 chrVII:122132-122473 5.7e-10 51_[+2]_25 chrVI:226575-226867 5.7e-10 30_[-2]_46 chrX:414813-414913 5.7e-10 65_[+2]_11 chrVII:185608-185931 5.7e-10 8_[-2]_68 chrV:135287-135612 5.7e-10 39_[-2]_37 chrV:61769-62105 9.8e-10 16_[-2]_60 chrV:311911-312245 9.8e-10 8_[-2]_68 chrXII:214783-215088 9.8e-10 11_[-2]_65 chrI:166141-166451 9.8e-10 55_[+2]_21 chrXVI:572098-572468 9.8e-10 68_[+2]_8 chrVI:180789-181195 9.8e-10 45_[-2]_31 chrVII:845486-845830 9.8e-10 73_[+2]_3 chrVIII:134171-134490 3.4e-09 74_[+2]_2 chrIV:645104-645218 3.4e-09 55_[-2]_21 chrXII:448536-448883 3.4e-09 4_[-2]_72 chrIV:802622-802874 3.4e-09 46_[-2]_30 chrXIV:631770-632040 4.2e-09 4_[-2]_72 chrXIV:96122-96459 4.2e-09 14_[-2]_62 chrXV:110868-111125 4.2e-09 29_[-2]_47 chrIII:123461-123793 4.2e-09 13_[-2]_63 chrIV:434190-434437 8.1e-09 14_[-2]_62 chrXIV:560603-560822 8.1e-09 44_[-2]_32 chrIII:295379-295611 8.1e-09 73_[+2]_3 chrXV:353940-354265 8.1e-09 2_[-2]_74 chrX:538432-538532 1.5e-08 65_[+2]_11 chrXIV:568001-568312 1.8e-08 73_[+2]_3 chrVI:101374-101547 1.8e-08 30_[+2]_46 chrXV:464358-464632 1.8e-08 68_[+2]_8 chrXIV:102572-102911 2.1e-08 60_[+2]_16 chrVII:730980-731330 2.1e-08 67_[+2]_9 chrXII:975879-976104 2.1e-08 55_[-2]_21 chrVI:137336-137704 2.1e-08 29_[-2]_47 chrXVI:856896-857062 3.4e-08 7_[+2]_69 chrVII:774184-774582 3.4e-08 50_[+2]_26 chrXIII:808137-808467 4.4e-08 7_[-2]_69 chrXV:976355-976574 5.6e-08 41_[+2]_35 chrXIII:572763-573114 5.6e-08 8_[-2]_68 chrIV:488577-489028 7.7e-08 58_[-2]_18 chrXVI:56085-56370 7.7e-08 5_[-2]_71 chrVIII:466907-467126 7.7e-08 57_[+2]_19 chrVII:1004081-1004370 1.1e-07 74_[+2]_2 chrXVI:744130-744468 1.1e-07 68_[+2]_8 chrVII:823342-823665 1.2e-07 64_[+2]_12 chrXVI:560074-560423 1.2e-07 13_[-2]_63 chrX:354133-354233 1.4e-07 71_[+2]_5 chrXIII:168704-169021 1.4e-07 33_[+2]_43 chrXI:313335-313581 1.6e-07 6_[-2]_70 chrXIII:362933-363228 1.6e-07 67_[+2]_9 chrV:434384-434734 1.6e-07 45_[-2]_31 chrVII:319747-319935 1.6e-07 23_[+2]_53 chrVII:110437-110810 1.6e-07 65_[-2]_11 chrIV:1256957-1257111 2e-07 37_[-2]_39 chrIV:619845-620183 3.1e-07 18_[-2]_58 chrXII:818484-818754 1.4e-06 73_[+2]_3 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAYCVDRRGRTCMBSGGTTCGAY MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TAAYCVDRRGRTCMBSGGTTCGAY width=24 seqs=79 chrV:551223-551467 ( 4) TAACGCGGGGATCAGCGGTTCGAT 1 chrXII:1052009-1052227 ( 17) TAACGCGGGGATCAGCGGTTCGAT 1 chrXIV:602244-602475 ( 39) TAACGCGGGGATCAGCGGTTCGAT 1 chrXIV:569801-569987 ( 37) TAACGCGGGGATCAGCGGTTCGAT 1 chrIX:210656-210830 ( 8) TAACGCGGGGATCAGCGGTTCGAT 1 chrIV:667887-668113 ( 71) TAACGCGGGGATCAGCGGTTCGAT 1 chrV:443130-443382 ( 10) TAACGCGGGGATCAGCGGTTCGAT 1 chrXI:140896-141242 ( 13) TCACCGTGGAGACCGGGGTTCGAC 1 chrXVI:210060-210422 ( 15) TCACCGTGGAGACCGGGGTTCGAC 1 chrV:487248-487524 ( 9) TCACCGTGGAGACCGGGGTTCGAC 1 chrVII:328428-328862 ( 22) TCACCGTGGAGACCGGGGTTCGAC 1 chrV:176936-177309 ( 61) TCACCGTGGAGACCGGGGTTCGAC 1 chrVII:541691-542067 ( 55) TCACCGTGGAGACCGGGGTTCGAC 1 chrIII:82434-82590 ( 14) TCACCGTGGAGACCGGGGTTCGAC 1 chrVII:401463-401624 ( 48) TCACCGTGGAGACCGGGGTTCGAC 1 chrII:405711-406118 ( 48) TAATCAGAAGATTATGGGTTCGAC 1 chrV:138501-138913 ( 43) TAATCAGAAGATTATGGGTTCGAC 1 chrX:355205-355305 ( 41) TAATCAGAAGATTATGGGTTCGAC 1 chrIV:568727-569106 ( 50) TAATCAGAAGATTATGGGTTCGAC 1 chrVII:405418-405675 ( 8) TAATCAGAAGATTATGGGTTCGAC 1 chrVII:736168-736543 ( 69) TAATCAGAAGATTATGGGTTCGAC 1 chrXI:162384-162698 ( 10) TAATCAGAAGATTATGGGTTCGAC 1 chrIV:1352385-1352659 ( 8) TAATCATAAGGTTAGGGGTTCGAG 1 chrV:435666-435953 ( 7) TAATCATAAGGTTAGGGGTTCGAG 1 chrXIII:480499-480849 ( 11) TAATCATAAGGTTAGGGGTTCGAG 1 chrVII:122132-122473 ( 52) TAATCATAAGGTTAGGGGTTCGAG 1 chrVI:226575-226867 ( 31) TAATCATAAGGTTAGGGGTTCGAG 1 chrX:414813-414913 ( 66) TAATCATAAGGTTAGGGGTTCGAG 1 chrVII:185608-185931 ( 9) TAATCATAAGGTTAGGGGTTCGAG 1 chrV:135287-135612 ( 40) TAATCATAAGGTTAGGGGTTCGAG 1 chrV:61769-62105 ( 17) CCATCGTTGGGCCCCCGGTTCGAT 1 chrV:311911-312245 ( 9) CAAGGAAGAGGTCATCGGTTCGAT 1 chrXII:214783-215088 ( 12) CAAGGAAGAGGTCATCGGTTCGAT 1 chrI:166141-166451 ( 56) CAAGGAAGAGGTCATCGGTTCGAT 1 chrXVI:572098-572468 ( 69) CCATCGTTGGGCCCCCGGTTCGAT 1 chrVI:180789-181195 ( 46) CCATCGTTGGGCCCCCGGTTCGAT 1 chrVII:845486-845830 ( 74) CCATCGTTGGGCCCCCGGTTCGAT 1 chrVIII:134171-134490 ( 75) TGATCCGGACAACCCCGGTTCGAA 1 chrIV:645104-645218 ( 56) TGATCCGGACAACCCCGGTTCGAA 1 chrXII:448536-448883 ( 5) TGATCCGGACAACCCCGGTTCGAA 1 chrIV:802622-802874 ( 47) TGATCCGGACAACCCCGGTTCGAA 1 chrXIV:631770-632040 ( 5) GGTGCGGGAGGTCCCGGGTTCGAG 1 chrXIV:96122-96459 ( 15) CCAAGGTGGGGACACGGGTTCGAT 1 chrXV:110868-111125 ( 30) CCAAGGTGGGGACACGGGTTCGAT 1 chrIII:123461-123793 ( 14) GGTGCGGGAGGTCCCGGGTTCGAG 1 chrIV:434190-434437 ( 15) TAATGTGGAGATCATCGGTTCAAA 1 chrXIV:560603-560822 ( 45) TAATGTGGAGATCATCGGTTCAAA 1 chrIII:295379-295611 ( 74) TAATGTGGAGATCATCGGTTCAAA 1 chrXV:353940-354265 ( 3) TAATGTGGAGATCATCGGTTCAAA 1 chrX:538432-538532 ( 66) TAAGGAGAAGACTGCGGGTTCGAG 1 chrXIV:568001-568312 ( 74) CATGCGAGAGGCCCTGGGTTCAAT 1 chrVI:101374-101547 ( 31) CATGCGAGAGGCCCTGGGTTCAAT 1 chrXV:464358-464632 ( 69) CATGCGAGAGGCCCTGGGTTCAAT 1 chrXIV:102572-102911 ( 61) TAATCGCAAGATCGTGAGTTCAAC 1 chrVII:730980-731330 ( 68) TAATCGCAAGATCGTGAGTTCAAC 1 chrXII:975879-976104 ( 56) TAATCGCAAGATCGTGAGTTCAAC 1 chrVI:137336-137704 ( 30) TAATCGCAAGATCGTGAGTTCAAC 1 chrXVI:856896-857062 ( 8) CATGGGAGAGGTCTCCGGTTCGAT 1 chrVII:774184-774582 ( 51) CATGGGAGAGGTCTCCGGTTCGAT 1 chrXIII:808137-808467 ( 8) TGATCCGAACAACCCCAGTTCGAA 1 chrXV:976355-976574 ( 42) TAATCTGAAGGTCGAGAGTTCGAA 1 chrXIII:572763-573114 ( 9) TAATCTGAAGGTCGAGAGTTCGAA 1 chrIV:488577-489028 ( 59) CACGGCGAAGATCCCGAGTTCGAA 1 chrXVI:56085-56370 ( 6) CAATCGAAGGGTTGCAGGTTCAAT 1 chrVIII:466907-467126 ( 58) TAATGCAAAGGTCGCTAGTTCAAT 1 chrVII:1004081-1004370 ( 75) TAATGCAAAGGTCGTTAGTTCAAT 1 chrXVI:744130-744468 ( 69) TAATGCAAAGGTCGTTAGTTCAAT 1 chrVII:823342-823665 ( 65) CACGCAGAACGTCCCCAGTTCGAT 1 chrXVI:560074-560423 ( 14) TTATCTGGAGGTCCTGTGTTCGAT 1 chrX:354133-354233 ( 72) AAATCTTGAGATCGGGCGTTCGAC 1 chrXIII:168704-169021 ( 34) AAATCTTGAGATCGGGCGTTCGAC 1 chrXI:313335-313581 ( 7) TGGCCGATGAAACCCTGGTTCGAT 1 chrXIII:362933-363228 ( 68) TGGCCGATGAAACCCTGGTTCGAT 1 chrV:434384-434734 ( 46) TGGCCGATGAAACCCTGGTTCGAT 1 chrVII:319747-319935 ( 24) TGGCCGATGAAACCCTGGTTCGAT 1 chrVII:110437-110810 ( 66) TGGCCGATGAAACCCTGGTTCGAT 1 chrIV:1256957-1257111 ( 38) CCAAGCATGGGGCCCGGGTTCGAT 1 chrIV:619845-620183 ( 19) GAACCAGAAGATTCCAGGTTCAAG 1 chrXII:818484-818754 ( 74) CGGTGGCTGTGATCCGGGTTCGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAYCVDRRGRTCMBSGGTTCGAY MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 24 n= 45881 bayes= 9.41741 E= 8.6e-245 -359 31 -235 119 105 -3 -24 -459 141 -294 -135 -179 -301 45 -24 80 -1295 181 70 -1295 -20 15 106 -142 -42 -162 106 -1 31 -1295 131 -113 105 -1295 92 -1295 -89 -135 194 -459 62 -1295 145 -1295 -20 -94 -394 102 -1295 197 -1295 -35 36 110 -24 -359 -359 87 70 -1 -359 76 149 -159 -101 -294 206 -459 -1295 -1295 236 -1295 -1295 -1295 -1295 171 -1295 -1295 -1295 171 -1295 236 -1295 -1295 -59 -1295 204 -1295 171 -1295 -1295 -1295 -101 45 -24 45 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAYCVDRRGRTCMBSGGTTCGAY MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 24 nsites= 79 E= 8.6e-245 0.025316 0.240506 0.037975 0.696203 0.632911 0.189873 0.164557 0.012658 0.810127 0.025316 0.075949 0.088608 0.037975 0.265823 0.164557 0.531646 0.000000 0.683544 0.316456 0.000000 0.265823 0.215190 0.405063 0.113924 0.227848 0.063291 0.405063 0.303797 0.379747 0.000000 0.481013 0.139241 0.632911 0.000000 0.367089 0.000000 0.164557 0.075949 0.746835 0.012658 0.468354 0.000000 0.531646 0.000000 0.265823 0.101266 0.012658 0.620253 0.000000 0.759494 0.000000 0.240506 0.392405 0.417722 0.164557 0.025316 0.025316 0.354430 0.316456 0.303797 0.025316 0.329114 0.544304 0.101266 0.151899 0.025316 0.810127 0.012658 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.202532 0.000000 0.797468 0.000000 1.000000 0.000000 0.000000 0.000000 0.151899 0.265823 0.164557 0.417722 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAYCVDRRGRTCMBSGGTTCGAY MEME-2 regular expression -------------------------------------------------------------------------------- [TC]AA[TC][CG][GAC][GTA][GA][AG]G[GA][TA][CT][CA][CGT][GC]GGTTC[GA]A[TC] -------------------------------------------------------------------------------- Time 660.71 secs. ******************************************************************************** ******************************************************************************** MOTIF RRTGTAYGGRTGTWW MEME-3 width = 15 sites = 169 llr = 1876 E-value = 2.6e-234 ******************************************************************************** -------------------------------------------------------------------------------- Motif RRTGTAYGGRTGTWW MEME-3 Description -------------------------------------------------------------------------------- Simplified A 36:::8:1:4::155 pos.-specific C ::::2:5:::::2:1 probability G 531a:1:9a6:8122 matrix T 1:9:8:5:::92633 bits 2.4 * 2.1 * * 1.9 * * 1.7 * ** Relative 1.4 * ** ** Entropy 1.2 ** ***** (16.0 bits) 0.9 *** ***** 0.7 *********** 0.5 ************* 0.2 ************** 0.0 --------------- Multilevel GATGTATGGGTGTAA consensus AG C C A CTT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRTGTAYGGRTGTWW MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chrVIII:382927-383311 + 32 1.40e-08 TTATTTTCAT GATGTATGGGTGTAT CGGATGTTCG chrXIII:650798-651148 - 56 2.14e-08 AAAACTGTGA AATGTACGGGTGTAA AACAGTCTAA chrX:157459-157559 + 25 2.74e-08 GGATGTATAA AGTGTACGGGTGTAA ACACATTGTC chrX:690633-690733 - 71 3.49e-08 CGCACATGGT GGTGTACGGGTGTGT TGATGACCAT chrIV:221963-222292 + 58 4.48e-08 ATGAGATAAG GGTGTACGGGTGTGG TAACCGTCGT chrIV:1355749-1355969 + 30 4.48e-08 AAATACTATA AATGTATGGGTGTAA TTTTAACCGA chrXII:932110-932462 + 39 5.40e-08 CGGATGTACG GATGTACGGATGTAT ACTATGTAAT chrII:89631-89953 + 59 5.40e-08 TGTTAAAGAG GGTGTATGGATGTAA AGTCACAAAA chrII:681963-682158 - 45 8.54e-08 AAAGTAATGG GGTGTATGGGTGTGG GTGGCAAAAA chrIV:229539-229753 - 56 8.54e-08 TAATCCTTCT GATGTACGGATGTTT TGTGTAAGAT chrIX:68225-68522 - 25 1.26e-07 ACATCTTAGT AATGTACGGATGTAA TAAACTCAAA chrII:592911-593272 + 44 1.26e-07 GGAGTTCAAA GATGTATGGATGCAA GAAAAGAGGT chrXIII:296808-297119 - 51 1.26e-07 AAAAGTTCTA GATGTATGGGTGTGC GGGTAATGCT chrXIII:225380-225721 - 43 1.26e-07 TAAAAAATAG AATGTACGGATGTAA TGCACGGATG chrXI:431383-431640 - 31 1.26e-07 ATGTAAAAAT AGTGTATGGGTGTAT TTGCGCTGTC chrVIII:125936-126303 - 31 1.81e-07 TAAAGATGTA GGTGTACGGATGCAT TAACGTCTTT chrII:415520-415860 + 43 2.11e-07 TGGATGACAA AATGCATGGGTGTAA AAAAGGAAAT chrXIII:224093-224330 + 29 2.11e-07 ATTTCAAAAA AATGTATGGATGTAA AATTCAGTAG chrXI:614098-614448 - 78 2.43e-07 CACCTTGT GGTGTGCGGGTGTTG CAGTCATTAA chrXIII:145901-146266 - 49 2.43e-07 TATGGTGTAT GGTGTATGGATGTAC AAAAATGCTG chrXVI:76359-76693 + 67 2.92e-07 CACATTCGTG GATGTACGGGTGAAA ATACAGTCAA chrV:396227-396565 - 31 2.92e-07 GGTTCACAAA AGTGTACGGATGTAT ACAACAGGGA chrXV:79780-80129 + 44 2.92e-07 ACTTATTTAA TATGTACGGGTGTTT ACATGGAGTT chrIV:1359409-1359799 - 40 3.37e-07 ATGGGTGCGT AATGTACGGATGTTT AATGTCTTTT chrXVI:378684-378928 + 84 3.37e-07 TGAGAACTCG AATGTACGGATGTTT TC chrX:703271-703371 + 59 3.37e-07 ATAAATAGTG GATGCATGGGTGCTT CCACGCGTCT chrIV:1062772-1063122 + 60 3.37e-07 GCCATCATGC GATGTGTGGGTGCTA TTTATTTTCA chrVI:65015-65322 + 49 3.37e-07 TATCTCTGAA TATGTACGGGTGTTG ACATGGAGAA chrII:181369-181620 - 49 3.37e-07 TATTCAATGT AATGTATGGGTGCTT TGTAAAGGGT chrVI:223947-224170 + 49 3.86e-07 GGTCTAAGAG TATGTACGGATGTAA AAGAAAACAG chrXI:108766-109069 - 52 3.86e-07 GAGCCAACTA AATGTACGGATGTTG TAATGTGTTT chrXII:262848-263064 - 57 3.86e-07 AATTAACATA AATGTATGGATGTAT TATTAAATGT chrXII:241644-241997 - 35 3.86e-07 TTACATTTTA TATGTACGGATGTAA AAAGGGAAAT chrXIII:732054-732373 - 41 4.45e-07 ACACATGCGC GATGTGCGGATGTAT TATGTCTTGA chrV:69083-69322 + 28 4.45e-07 GAAGCTTTGT GGGGTACGGGTGCAT GCTCGGCTTT chrVII:149114-149487 + 68 4.45e-07 TGTATGGGTG GGTGTATGGATGCTG TAAGCACAGT chrXVI:404625-404779 - 52 4.45e-07 TTTTTAGAAT GATGCATGGGTGTGC AGCCTTTTTT chrII:45020-45344 - 36 5.14e-07 ACATACATAG AATGTACGGATGCAT GATTGTCTCA chrXIII:551371-551783 + 1 5.14e-07 . AATGTATGGGTGCGT AATGTACAGA chrVI:95484-95845 + 22 5.14e-07 TACGCAATCC GGTGTGTGGGTGCAT GACTGATTGG chrII:605747-606105 - 38 5.14e-07 TGATGGTGAA GATGTACAGGTGTAA AACTGTCAGA chrI:81960-82249 + 56 5.14e-07 ATCTAGCGGA GGTGCACGGATGTAC CAACAGTTTT chrXII:282528-282818 - 32 5.14e-07 GGAGGGAAAA GATGTACAGGTGTAA AAAAGCACCC chrIV:125295-125645 + 58 6.71e-07 AATTTGGTGC GGTGTATGGGTTCAA GTTCCCAAAA chrXV:678856-679166 + 49 6.71e-07 GGGTCCACAA TATGTACGGATGTAT GGTCCCAAAA chrVIII:505839-506174 + 45 7.59e-07 GTCTGGGTGA AATGTATGGATGCAT AATTGTCTCG chrVII:254173-254524 + 49 7.59e-07 CATCTTTCAA TATGCACGGGTGCAA CCTCAAATAT chrII:477078-477452 - 17 7.59e-07 TGGGTGTATA AATGTGTGGGTGCAA CATGAATGTA chrXV:1028712-1029072 + 65 8.74e-07 AAACAAATCA AATGTACGGATGCAC AATGGTAAAC chrXV:92953-93272 + 50 8.74e-07 GAACGTCACA TGTGTACGGATGTAG TTGTGTCACG chrVII:534828-535196 + 42 8.74e-07 GGGTTACACA AATGCACGGATGCAA ATATAAAATA chrIV:341296-341599 + 46 8.74e-07 TGGGTGTTAA AATGTACGGATGGAA AAGTAGACTC chrVI:221752-222059 + 65 8.74e-07 GGGTGTTAAA AATGTACGGGTGAAA AAAGTCTTAT chrXII:818874-819116 - 52 9.91e-07 CAATAATCAA TATGTACGGATGTTG GAAAGGTATG chrVII:726439-726762 - 52 9.91e-07 ATTTAAAAAT AGGGTATGGGTGTAT ATAGGGTATG chrXII:522186-522414 - 51 9.91e-07 GAAAACCTTT TGTGTACGGATGTTT AGTTAATAAT chrIV:358122-358407 + 35 1.12e-06 CTTGTCAGAT AATGTATGGGTGGTG TGTACACCAA chrIV:217205-217502 - 9 1.12e-06 TATAGAATAA AATGTACGGGTTCAA AGCAGGGC chrIV:1300957-1301320 - 19 1.12e-06 AAACATCCAC AGTGCACGGATGTTT GAAGGAAAAT chrXV:161138-161402 + 26 1.12e-06 TAGGAATCCC GATGTATGGGTTTGG TTGCCAGAAA chrV:305809-306208 - 25 1.12e-06 TGGGTTTGTA AATGTGTGGGTGTAC AGTCCCGATA chrXVI:188639-188918 - 60 1.12e-06 CATAGTAACC GATGCATGGGTTTTA AAAGTCACGT chrXVI:279958-280308 - 29 1.26e-06 GGAATTGTGA GGTGCACGGATGCGG ACTTCTCCTT chrXVI:406219-406535 - 42 1.26e-06 TGGAGGTGGA AAGGTACGGATGTTA AACTTCATAA chrXII:922119-922529 - 69 1.26e-06 AGAATTGGAA TATGTACGGGTGTCA ATTTCAAACG chrXII:921740-921940 + 50 1.26e-06 TACTACAGCG GGGGCACGGGTGCAT ACATCTTCAA chrVIII:148952-149231 + 41 1.43e-06 ATAATTCAAT GGTGCATGGGTGAAA ATGTATGGGC chrXVI:731942-732292 - 35 1.43e-06 AACCATCCTA AAGGTATGGGTGTAC TGACGATGCG chrXIV:330856-331092 - 24 1.43e-06 TTTTACTTTA GATGTAAGGATGTAA GATCTCTGAA chrXII:781483-781845 + 42 1.43e-06 GGTTTATGAA AATGCACGGATGCAT TTTTTCTAGA chrVII:438584-438893 + 70 1.61e-06 AAAGTTCCAA AATGTATGGATGGTA AGGTCTTTTT chrXIV:444488-444761 + 31 1.61e-06 GCAAAACAAT AATGTACGGATTTAA AGAGGTACGG chrX:265456-265556 + 33 1.61e-06 CACAAAATGC GAGGTGTGGGTGCAA TCAAGACTCC chrIV:130597-130958 + 22 1.61e-06 AAAGCTATAA AATGTGCGGATGTTT GTATATGTCA chrXI:382214-382446 - 23 1.61e-06 TGTTGGGTGT GATGTCCGGATGCAA CAGCAGCAAA chrXVI:281650-281885 - 47 1.61e-06 AATCAAAGGA AGTGTAAGGGTGTAA AGAGGTAAGG chrXIII:124328-124678 + 60 1.61e-06 ACATTTTAAT AATGTACGGATTTAA TAGCAGTCTT chrV:85126-85455 - 58 1.81e-06 AATACATCGA GGGGTATGGGTGGAT GATATCACTG chrXII:1028254-1028556 - 41 1.81e-06 CATACATTTT GGTGCATGGGTGATA TTTTGTCTTT chrIV:538957-539213 - 68 1.81e-06 GATTGAATGA GGGGTGTGGGTGTGA TAATTCATGT chrXII:796425-796838 + 53 1.81e-06 TATTATCCAG GAGGCACGGATGCAA AAGATAGAAG chrII:60878-61234 + 67 2.02e-06 AGCAATTGAG GGTGTACAGATGTTA AAGTAGTCTG chrV:53534-53898 + 69 2.02e-06 ACACATATTT GGTGTTCGGATGTTA AACAGGGTAT chrV:140478-140878 + 47 2.02e-06 GGCATTGTAA AAGGTATGGGTGCTT TGTGCGTCCA chrVII:277064-277368 - 59 2.02e-06 CCATAGAGCG GGTGTATGGGTCTAG CTAAAATACA chrXIII:754425-754744 + 38 2.02e-06 CGCTATTCTG GATGTATGGGGGTAT TTTATGTTTG chrVII:1000349-1000566 - 49 2.02e-06 CAAATATGCA GGTGTTTGGGTGCTA TCCTAGTGGA chrVII:310534-310888 - 23 2.02e-06 GTGGGTCCCT GGTGTACAGATGTTA CATTGGTTAC chrIX:316154-316597 - 25 2.02e-06 TTTGTAAAAT AATGTATGGGTTCTA GTCTGAAAAC chrVII:366099-366408 + 34 2.02e-06 GATTTATAAA TATGTGTGGGTGTTT ATATGATCAG chrIV:411274-411632 - 30 2.02e-06 TTGGGTGCCC GGGGTGTGGGTGTTT GATTTGTTTC chrXV:901470-901592 + 59 2.27e-06 GGAAACGTAA AATGTACGGGTGAAC AGTCCCGAAA chrXII:1012050-1012400 - 61 2.27e-06 ATTTGCGTGT GGTGCATGGGTTCTA TTCCTCATTA chrVII:788336-788701 + 61 2.55e-06 GGGTTTAGAG TATGCACGGATGTTG TAAGGAATAT chrIV:321700-321949 - 23 2.55e-06 AATAAAGATT GGTGTACGGAGGTAA AGGTATGAAA chrV:423123-423442 - 38 2.55e-06 GGGTGTAGAA GGTGTACGGAGGTAA ATATGCAGCA chrVIII:74987-75356 - 30 2.55e-06 GGATGTAGAA AATGTACAGGTGTGA ACTTGCAGGT chrVII:648978-649312 + 54 2.55e-06 ATGGGTTCTC GTTGTACGGATGTTT AAAATGTCCT chrXVI:627380-627730 + 38 2.55e-06 CGGTCGTTTG GATGCGTGGGTGGTA TAGTTTCTTT chrXII:673854-674221 - 65 2.84e-06 ATCAATATCT GGTGCATGGGTCTAA AAAAATTAAG chrVII:371256-371466 - 42 2.84e-06 GGCGGTGTGA GGTGCATGGGTGCCG GTATTTTTTT chrXIII:298587-298824 - 61 2.84e-06 TGGGCCATGT AATGTCTGGGTGTTG CTTTAATCGA chrIII:163466-163866 + 31 2.84e-06 GCCGCGGTTG GGTGCGTGGGTGCGG TAATTTAACG chrXV:882113-882463 - 58 3.17e-06 GGAAATATGC GGTGCACAGGTGTTT TTATAGGGGG chrXV:1004121-1004373 + 50 3.17e-06 GTATGTTATG GGTGCAAGGGTGTTT TTTTTTTTTT chrXVI:302708-302977 - 35 3.17e-06 GGTGTTTTAG GATGTCTGGATGTAC AAGTTAGCTG chrXIV:63131-63497 + 54 3.53e-06 GGGTTGCTAA AATGTTCGGATGTAA AGTAGTATTG chrV:270383-270613 - 37 3.53e-06 CATTTAGTGG TATGTATGGGTGATA AATTTTTTTC chrX:75381-75481 + 17 3.53e-06 TTCAAATAGT GAGGTGTGGATGTAT AGAGAAATTA chrXV:1025751-1025997 - 50 3.94e-06 AATTACACGT GATGAATGGGTGTTC AGCATATGTT chrX:73415-73515 - 44 3.94e-06 TTTTCAGTGT GGTGCAAGGATGTAA AATGATGTGT chrXVI:575148-575498 - 25 3.94e-06 TTTCTGTTCT TGTGTGTGGGTGCTT CAGGCAAAGA chrIV:1450942-1451192 + 66 3.94e-06 AAAATACAAA TATGTACAGGTGTTA ATGTCTAAAT chrXII:645793-646143 - 26 4.38e-06 TCGCCCGACG GGTGAATGGGTGTGG GTGGAACGAG chrIV:1401255-1401595 - 56 4.38e-06 AAGGGTAATA TATGTGTGGGTGGAA AATGATTGGG chrXI:618815-619184 + 62 4.38e-06 AAATCTATTA GAGGCACGGATGGAA ATAGTATTTA chrXV:167997-168408 + 36 4.38e-06 AACTTAAATA TAGGCACGGGTGTTT AAAGCCGCCC chrXV:866587-866942 + 42 4.83e-06 GCATTCTGGG TTTGTATGGGTGTTA CACCGGTTTT chrXII:65371-65721 + 4 4.83e-06 CCG GATGTACGGCTGTGT GATGCTCCTC chrII:332337-332727 - 41 5.34e-06 TGGGTTTAGA ATTGTATGGGTGCAG CAAGGAAATA chrXV:94502-94810 - 27 5.34e-06 CGAAGACAAT ATTGCATGGGTGTTA ATTCTATTTT chrXI:313335-313581 - 86 5.34e-06 . GATGTGCAGATGTAA CCAAAAATTT chrXII:48751-49061 + 47 5.34e-06 GGGTGTCTAA GATGTACGGATCTTC ATTGGGATGG chrXII:498543-498846 - 27 5.34e-06 TTCCTTACAG GATGCACGGAGGTAA ACAGGAAAGA chrXII:897734-898013 - 36 5.93e-06 GGGTTTTTTG GAGGTACAGGTGTTG TAGAATTCTG chrXIV:495197-495526 + 84 6.54e-06 GGGTGTGTAT AATGTACGGATTGAA TA chrIII:178357-178641 + 23 6.54e-06 AGAGTAGTAA AATGTACAGATGTTT ATTAAGTCCG chrXIII:552910-553260 - 36 6.54e-06 CTTTCTATGA GATGTATGGGTCTCA TGAATAACGG chrVIII:175073-175384 - 2 6.54e-06 GGAGTTTCAT GATGTATGGGTCTCA G chrIX:99657-99992 + 36 7.20e-06 TTCATGAATA AATGTACTGGTGTTA CATGGTGTAC chrXV:253815-254103 + 69 7.20e-06 TTATACGCGC GGTGTACGGATTAAA AAAGTTTTGT chrIV:308030-308367 - 74 7.20e-06 TGCCTGCATA TATGTAAGGATGTAA CAGGAAATGT chrX:391834-391934 - 67 7.20e-06 CGCTCGCAGG GAGGTCTGGGTGTGG GGCGTGTGCG chrII:604151-604446 - 51 8.69e-06 GAATATGAAA AATGTACAGATGTGT AAATGTACGG chrIV:117195-117563 - 39 8.69e-06 TGGGTGTAGA TATGTATGGGTCTGA GATTAATACA chrXV:216256-216680 - 31 1.04e-05 GGAAGGCGCG GGTGCTCGGATGTTC CGATAAAATA chrXI:67778-68053 - 46 1.04e-05 AATTTGATGC GGTGCACGGATTTCA GCACGGGTTT chrV:362224-362472 - 50 1.14e-05 ATTGAAATAT ATTGTATGGGTTTAA ATTTCTTGGA chrVII:856731-856987 + 55 1.14e-05 CCATTGGTGC GGTGTATGGGCGGGT ACCCTCAAAA chrXIV:499353-499565 + 24 1.25e-05 AAACTCATGT GGTGCACTGGTGTTG TTTCCAAGAC chrXV:109794-110023 + 42 1.25e-05 TTAAATGTGT GGTTTATGGGTGCAC CAGGGCTTTA chrXI:158255-158575 - 33 1.36e-05 TTATTTCCAG TGTGCACGGGTTGAA ATAAATGAAT chrV:491123-491340 - 37 1.36e-05 CCCGCAGGTG GGTGTGCGGGCGCTC AGCCTGCTAT chrIX:257367-257679 - 58 1.49e-05 ACAACTTTGC GGTGTACAGATGTCG TCACATACCG chrIV:579079-579358 - 36 1.49e-05 TCTACTTTAT GGTTTATGGGTGGTA AAAGGCTTAT chrXV:779722-780071 + 19 1.61e-05 GTATGGGCTG ATTGTATGGGTTTAT ACAGGCCGTC chrXV:978805-979121 + 25 1.61e-05 TATACACAAG GATGAATGGGTTCTA CGACACCGCG chrII:167939-168184 - 22 1.91e-05 TGGTGAAAAA TATGTCTGGGTTTTA AAACACTGTC chrXVI:520182-520531 - 56 1.91e-05 TTCCTCCGGC GAGGCCTGGGTGGAA CACTCAGGCA chrVIII:296897-297198 - 58 1.91e-05 AGCATGCTGT GATGTACTGGTGGAC GAAATTGTGA chrIV:836078-836289 + 48 1.91e-05 GATAGAGTGA GAGGTGTGGGTTCTG CGGCAGAATG chrXV:673686-674036 + 16 2.25e-05 CAGTACAAGA GGTGTACGGCTTTTG AAAGTCCACT chrXII:731980-732272 + 85 2.25e-05 GATATCTTCG GATGCAAGGGTTCGA A chrX:651288-651388 - 57 2.43e-05 TTGAGACAAA TATGTATGGGTTAAG AATAATTATG chrX:90089-90189 - 46 2.43e-05 AAAACAAGGC CATGTATGGGTGAGA ATGTTCAGGT chrVII:919984-920199 - 47 2.64e-05 TTTTTTTCTT TATGTCTGGGTTTTT TAATATGTTT chrXV:968124-968412 + 51 2.86e-05 AAAAGCGTGG GGTGCGTGGGCGTGC GCTGCTCGAG chrIV:490995-491244 - 60 3.08e-05 TTTTTTCCTG AATGATTGGGTGTAA TAAAATAGGT chrXV:780609-780780 + 63 3.08e-05 TGGTTAGCTT AATGTATAGGTTCTT GATAGTATGA chrXIV:241402-241714 - 53 3.33e-05 GTGTATTGAT GGTGTTTAGGTGCTG GATGTTGGGT chrXV:232003-232353 + 27 3.59e-05 CCTTGGCAAC CGTGTCTGGGTGTGT GATATATTAC chrXVI:699967-700373 - 12 4.17e-05 GATTGGGTGT GATGTAAGGATTCGC GGTCCTCGAA chrXVI:280872-281222 - 80 4.49e-05 GATAGG GATTCATGGGTGGGT ACAAATGGCA chrXV:980568-980853 + 16 4.83e-05 GAAATCACAA ATTGTATGGGCGTGT GGTCTAGTGG chrXII:1018986-1019329 + 36 4.83e-05 AAAATATATT AATGTTTGGGTTTCA ACGTTTCCGT chrXV:900328-900678 - 76 5.57e-05 CAAGAACTTC GGTGTTTGGGTTAGA TACGATTCCA chrXII:370630-370930 + 56 6.39e-05 CTAACCGTGT GGTTCATGGGTGGGC GAAGTGCGCA chrXV:282001-282322 + 22 9.52e-05 CGCTTAAATA GAGGAGTGGATGCTC AGGATAACAT chrVIII:103914-104220 - 38 9.52e-05 AATAACAAAA AATGTGTGGGCTGAA AACCGTCTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRTGTAYGGRTGTWW MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrVIII:382927-383311 1.4e-08 31_[+3]_54 chrXIII:650798-651148 2.1e-08 55_[-3]_30 chrX:157459-157559 2.7e-08 24_[+3]_61 chrX:690633-690733 3.5e-08 70_[-3]_15 chrIV:221963-222292 4.5e-08 57_[+3]_28 chrIV:1355749-1355969 4.5e-08 29_[+3]_56 chrXII:932110-932462 5.4e-08 38_[+3]_47 chrII:89631-89953 5.4e-08 58_[+3]_27 chrII:681963-682158 8.5e-08 44_[-3]_41 chrIV:229539-229753 8.5e-08 55_[-3]_30 chrIX:68225-68522 1.3e-07 24_[-3]_61 chrII:592911-593272 1.3e-07 43_[+3]_42 chrXIII:296808-297119 1.3e-07 50_[-3]_35 chrXIII:225380-225721 1.3e-07 42_[-3]_43 chrXI:431383-431640 1.3e-07 30_[-3]_55 chrVIII:125936-126303 1.8e-07 30_[-3]_55 chrII:415520-415860 2.1e-07 42_[+3]_43 chrXIII:224093-224330 2.1e-07 28_[+3]_57 chrXI:614098-614448 2.4e-07 77_[-3]_8 chrXIII:145901-146266 2.4e-07 48_[-3]_37 chrXVI:76359-76693 2.9e-07 66_[+3]_19 chrV:396227-396565 2.9e-07 30_[-3]_55 chrXV:79780-80129 2.9e-07 43_[+3]_42 chrIV:1359409-1359799 3.4e-07 39_[-3]_46 chrXVI:378684-378928 3.4e-07 83_[+3]_2 chrX:703271-703371 3.4e-07 58_[+3]_27 chrIV:1062772-1063122 3.4e-07 59_[+3]_26 chrVI:65015-65322 3.4e-07 48_[+3]_37 chrII:181369-181620 3.4e-07 48_[-3]_37 chrVI:223947-224170 3.9e-07 48_[+3]_37 chrXI:108766-109069 3.9e-07 51_[-3]_34 chrXII:262848-263064 3.9e-07 56_[-3]_29 chrXII:241644-241997 3.9e-07 34_[-3]_51 chrXIII:732054-732373 4.5e-07 40_[-3]_45 chrV:69083-69322 4.5e-07 27_[+3]_58 chrVII:149114-149487 4.5e-07 67_[+3]_18 chrXVI:404625-404779 4.5e-07 51_[-3]_34 chrII:45020-45344 5.1e-07 35_[-3]_50 chrXIII:551371-551783 5.1e-07 [+3]_85 chrVI:95484-95845 5.1e-07 21_[+3]_64 chrII:605747-606105 5.1e-07 37_[-3]_48 chrI:81960-82249 5.1e-07 55_[+3]_30 chrXII:282528-282818 5.1e-07 31_[-3]_54 chrIV:125295-125645 6.7e-07 57_[+3]_28 chrXV:678856-679166 6.7e-07 48_[+3]_37 chrVIII:505839-506174 7.6e-07 44_[+3]_41 chrVII:254173-254524 7.6e-07 48_[+3]_37 chrII:477078-477452 7.6e-07 16_[-3]_69 chrXV:1028712-1029072 8.7e-07 64_[+3]_21 chrXV:92953-93272 8.7e-07 49_[+3]_36 chrVII:534828-535196 8.7e-07 41_[+3]_44 chrIV:341296-341599 8.7e-07 45_[+3]_40 chrVI:221752-222059 8.7e-07 64_[+3]_21 chrXII:818874-819116 9.9e-07 51_[-3]_34 chrVII:726439-726762 9.9e-07 51_[-3]_34 chrXII:522186-522414 9.9e-07 50_[-3]_35 chrIV:358122-358407 1.1e-06 34_[+3]_51 chrIV:217205-217502 1.1e-06 8_[-3]_77 chrIV:1300957-1301320 1.1e-06 18_[-3]_67 chrXV:161138-161402 1.1e-06 25_[+3]_60 chrV:305809-306208 1.1e-06 24_[-3]_61 chrXVI:188639-188918 1.1e-06 59_[-3]_26 chrXVI:279958-280308 1.3e-06 28_[-3]_57 chrXVI:406219-406535 1.3e-06 41_[-3]_44 chrXII:922119-922529 1.3e-06 68_[-3]_17 chrXII:921740-921940 1.3e-06 49_[+3]_36 chrVIII:148952-149231 1.4e-06 40_[+3]_45 chrXVI:731942-732292 1.4e-06 34_[-3]_51 chrXIV:330856-331092 1.4e-06 23_[-3]_62 chrXII:781483-781845 1.4e-06 41_[+3]_44 chrVII:438584-438893 1.6e-06 69_[+3]_16 chrXIV:444488-444761 1.6e-06 30_[+3]_55 chrX:265456-265556 1.6e-06 32_[+3]_53 chrIV:130597-130958 1.6e-06 21_[+3]_64 chrXI:382214-382446 1.6e-06 22_[-3]_63 chrXVI:281650-281885 1.6e-06 46_[-3]_39 chrXIII:124328-124678 1.6e-06 59_[+3]_26 chrV:85126-85455 1.8e-06 57_[-3]_28 chrXII:1028254-1028556 1.8e-06 40_[-3]_45 chrIV:538957-539213 1.8e-06 67_[-3]_18 chrXII:796425-796838 1.8e-06 52_[+3]_33 chrII:60878-61234 2e-06 66_[+3]_19 chrV:53534-53898 2e-06 68_[+3]_17 chrV:140478-140878 2e-06 46_[+3]_39 chrVII:277064-277368 2e-06 58_[-3]_27 chrXIII:754425-754744 2e-06 37_[+3]_48 chrVII:1000349-1000566 2e-06 48_[-3]_37 chrVII:310534-310888 2e-06 22_[-3]_63 chrIX:316154-316597 2e-06 24_[-3]_61 chrVII:366099-366408 2e-06 33_[+3]_52 chrIV:411274-411632 2e-06 29_[-3]_56 chrXV:901470-901592 2.3e-06 58_[+3]_27 chrXII:1012050-1012400 2.3e-06 60_[-3]_25 chrVII:788336-788701 2.5e-06 60_[+3]_25 chrIV:321700-321949 2.5e-06 22_[-3]_63 chrV:423123-423442 2.5e-06 37_[-3]_48 chrVIII:74987-75356 2.5e-06 29_[-3]_56 chrVII:648978-649312 2.5e-06 53_[+3]_32 chrXVI:627380-627730 2.5e-06 37_[+3]_48 chrXII:673854-674221 2.8e-06 64_[-3]_21 chrVII:371256-371466 2.8e-06 41_[-3]_44 chrXIII:298587-298824 2.8e-06 60_[-3]_25 chrIII:163466-163866 2.8e-06 30_[+3]_55 chrXV:882113-882463 3.2e-06 57_[-3]_28 chrXV:1004121-1004373 3.2e-06 49_[+3]_36 chrXVI:302708-302977 3.2e-06 34_[-3]_51 chrXIV:63131-63497 3.5e-06 53_[+3]_32 chrV:270383-270613 3.5e-06 36_[-3]_49 chrX:75381-75481 3.5e-06 16_[+3]_69 chrXV:1025751-1025997 3.9e-06 49_[-3]_36 chrX:73415-73515 3.9e-06 43_[-3]_42 chrXVI:575148-575498 3.9e-06 24_[-3]_61 chrIV:1450942-1451192 3.9e-06 65_[+3]_20 chrXII:645793-646143 4.4e-06 25_[-3]_60 chrIV:1401255-1401595 4.4e-06 55_[-3]_30 chrXI:618815-619184 4.4e-06 61_[+3]_24 chrXV:167997-168408 4.4e-06 35_[+3]_50 chrXV:866587-866942 4.8e-06 41_[+3]_44 chrXII:65371-65721 4.8e-06 3_[+3]_82 chrII:332337-332727 5.3e-06 40_[-3]_45 chrXV:94502-94810 5.3e-06 26_[-3]_59 chrXI:313335-313581 5.3e-06 85_[-3] chrXII:48751-49061 5.3e-06 46_[+3]_39 chrXII:498543-498846 5.3e-06 26_[-3]_59 chrXII:897734-898013 5.9e-06 35_[-3]_50 chrXIV:495197-495526 6.5e-06 83_[+3]_2 chrIII:178357-178641 6.5e-06 22_[+3]_63 chrXIII:552910-553260 6.5e-06 35_[-3]_50 chrVIII:175073-175384 6.5e-06 1_[-3]_84 chrIX:99657-99992 7.2e-06 35_[+3]_50 chrXV:253815-254103 7.2e-06 68_[+3]_17 chrIV:308030-308367 7.2e-06 73_[-3]_12 chrX:391834-391934 7.2e-06 66_[-3]_19 chrII:604151-604446 8.7e-06 50_[-3]_35 chrIV:117195-117563 8.7e-06 38_[-3]_47 chrXV:216256-216680 1e-05 30_[-3]_55 chrXI:67778-68053 1e-05 45_[-3]_40 chrV:362224-362472 1.1e-05 49_[-3]_36 chrVII:856731-856987 1.1e-05 54_[+3]_31 chrXIV:499353-499565 1.2e-05 23_[+3]_62 chrXV:109794-110023 1.2e-05 41_[+3]_44 chrXI:158255-158575 1.4e-05 32_[-3]_53 chrV:491123-491340 1.4e-05 36_[-3]_49 chrIX:257367-257679 1.5e-05 57_[-3]_28 chrIV:579079-579358 1.5e-05 35_[-3]_50 chrXV:779722-780071 1.6e-05 18_[+3]_67 chrXV:978805-979121 1.6e-05 24_[+3]_61 chrII:167939-168184 1.9e-05 21_[-3]_64 chrXVI:520182-520531 1.9e-05 55_[-3]_30 chrVIII:296897-297198 1.9e-05 57_[-3]_28 chrIV:836078-836289 1.9e-05 47_[+3]_38 chrXV:673686-674036 2.2e-05 15_[+3]_70 chrXII:731980-732272 2.2e-05 84_[+3]_1 chrX:651288-651388 2.4e-05 56_[-3]_29 chrX:90089-90189 2.4e-05 45_[-3]_40 chrVII:919984-920199 2.6e-05 46_[-3]_39 chrXV:968124-968412 2.9e-05 50_[+3]_35 chrIV:490995-491244 3.1e-05 59_[-3]_26 chrXV:780609-780780 3.1e-05 62_[+3]_23 chrXIV:241402-241714 3.3e-05 52_[-3]_33 chrXV:232003-232353 3.6e-05 26_[+3]_59 chrXVI:699967-700373 4.2e-05 11_[-3]_74 chrXVI:280872-281222 4.5e-05 79_[-3]_6 chrXV:980568-980853 4.8e-05 15_[+3]_70 chrXII:1018986-1019329 4.8e-05 35_[+3]_50 chrXV:900328-900678 5.6e-05 75_[-3]_10 chrXII:370630-370930 6.4e-05 55_[+3]_30 chrXV:282001-282322 9.5e-05 21_[+3]_64 chrVIII:103914-104220 9.5e-05 37_[-3]_48 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRTGTAYGGRTGTWW MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RRTGTAYGGRTGTWW width=15 seqs=169 chrVIII:382927-383311 ( 32) GATGTATGGGTGTAT 1 chrXIII:650798-651148 ( 56) AATGTACGGGTGTAA 1 chrX:157459-157559 ( 25) AGTGTACGGGTGTAA 1 chrX:690633-690733 ( 71) GGTGTACGGGTGTGT 1 chrIV:221963-222292 ( 58) GGTGTACGGGTGTGG 1 chrIV:1355749-1355969 ( 30) AATGTATGGGTGTAA 1 chrXII:932110-932462 ( 39) GATGTACGGATGTAT 1 chrII:89631-89953 ( 59) GGTGTATGGATGTAA 1 chrII:681963-682158 ( 45) GGTGTATGGGTGTGG 1 chrIV:229539-229753 ( 56) GATGTACGGATGTTT 1 chrIX:68225-68522 ( 25) AATGTACGGATGTAA 1 chrII:592911-593272 ( 44) GATGTATGGATGCAA 1 chrXIII:296808-297119 ( 51) GATGTATGGGTGTGC 1 chrXIII:225380-225721 ( 43) AATGTACGGATGTAA 1 chrXI:431383-431640 ( 31) AGTGTATGGGTGTAT 1 chrVIII:125936-126303 ( 31) GGTGTACGGATGCAT 1 chrII:415520-415860 ( 43) AATGCATGGGTGTAA 1 chrXIII:224093-224330 ( 29) AATGTATGGATGTAA 1 chrXI:614098-614448 ( 78) GGTGTGCGGGTGTTG 1 chrXIII:145901-146266 ( 49) GGTGTATGGATGTAC 1 chrXVI:76359-76693 ( 67) GATGTACGGGTGAAA 1 chrV:396227-396565 ( 31) AGTGTACGGATGTAT 1 chrXV:79780-80129 ( 44) TATGTACGGGTGTTT 1 chrIV:1359409-1359799 ( 40) AATGTACGGATGTTT 1 chrXVI:378684-378928 ( 84) AATGTACGGATGTTT 1 chrX:703271-703371 ( 59) GATGCATGGGTGCTT 1 chrIV:1062772-1063122 ( 60) GATGTGTGGGTGCTA 1 chrVI:65015-65322 ( 49) TATGTACGGGTGTTG 1 chrII:181369-181620 ( 49) AATGTATGGGTGCTT 1 chrVI:223947-224170 ( 49) TATGTACGGATGTAA 1 chrXI:108766-109069 ( 52) AATGTACGGATGTTG 1 chrXII:262848-263064 ( 57) AATGTATGGATGTAT 1 chrXII:241644-241997 ( 35) TATGTACGGATGTAA 1 chrXIII:732054-732373 ( 41) GATGTGCGGATGTAT 1 chrV:69083-69322 ( 28) GGGGTACGGGTGCAT 1 chrVII:149114-149487 ( 68) GGTGTATGGATGCTG 1 chrXVI:404625-404779 ( 52) GATGCATGGGTGTGC 1 chrII:45020-45344 ( 36) AATGTACGGATGCAT 1 chrXIII:551371-551783 ( 1) AATGTATGGGTGCGT 1 chrVI:95484-95845 ( 22) GGTGTGTGGGTGCAT 1 chrII:605747-606105 ( 38) GATGTACAGGTGTAA 1 chrI:81960-82249 ( 56) GGTGCACGGATGTAC 1 chrXII:282528-282818 ( 32) GATGTACAGGTGTAA 1 chrIV:125295-125645 ( 58) GGTGTATGGGTTCAA 1 chrXV:678856-679166 ( 49) TATGTACGGATGTAT 1 chrVIII:505839-506174 ( 45) AATGTATGGATGCAT 1 chrVII:254173-254524 ( 49) TATGCACGGGTGCAA 1 chrII:477078-477452 ( 17) AATGTGTGGGTGCAA 1 chrXV:1028712-1029072 ( 65) AATGTACGGATGCAC 1 chrXV:92953-93272 ( 50) TGTGTACGGATGTAG 1 chrVII:534828-535196 ( 42) AATGCACGGATGCAA 1 chrIV:341296-341599 ( 46) AATGTACGGATGGAA 1 chrVI:221752-222059 ( 65) AATGTACGGGTGAAA 1 chrXII:818874-819116 ( 52) TATGTACGGATGTTG 1 chrVII:726439-726762 ( 52) AGGGTATGGGTGTAT 1 chrXII:522186-522414 ( 51) TGTGTACGGATGTTT 1 chrIV:358122-358407 ( 35) AATGTATGGGTGGTG 1 chrIV:217205-217502 ( 9) AATGTACGGGTTCAA 1 chrIV:1300957-1301320 ( 19) AGTGCACGGATGTTT 1 chrXV:161138-161402 ( 26) GATGTATGGGTTTGG 1 chrV:305809-306208 ( 25) AATGTGTGGGTGTAC 1 chrXVI:188639-188918 ( 60) GATGCATGGGTTTTA 1 chrXVI:279958-280308 ( 29) GGTGCACGGATGCGG 1 chrXVI:406219-406535 ( 42) AAGGTACGGATGTTA 1 chrXII:922119-922529 ( 69) TATGTACGGGTGTCA 1 chrXII:921740-921940 ( 50) GGGGCACGGGTGCAT 1 chrVIII:148952-149231 ( 41) GGTGCATGGGTGAAA 1 chrXVI:731942-732292 ( 35) AAGGTATGGGTGTAC 1 chrXIV:330856-331092 ( 24) GATGTAAGGATGTAA 1 chrXII:781483-781845 ( 42) AATGCACGGATGCAT 1 chrVII:438584-438893 ( 70) AATGTATGGATGGTA 1 chrXIV:444488-444761 ( 31) AATGTACGGATTTAA 1 chrX:265456-265556 ( 33) GAGGTGTGGGTGCAA 1 chrIV:130597-130958 ( 22) AATGTGCGGATGTTT 1 chrXI:382214-382446 ( 23) GATGTCCGGATGCAA 1 chrXVI:281650-281885 ( 47) AGTGTAAGGGTGTAA 1 chrXIII:124328-124678 ( 60) AATGTACGGATTTAA 1 chrV:85126-85455 ( 58) GGGGTATGGGTGGAT 1 chrXII:1028254-1028556 ( 41) GGTGCATGGGTGATA 1 chrIV:538957-539213 ( 68) GGGGTGTGGGTGTGA 1 chrXII:796425-796838 ( 53) GAGGCACGGATGCAA 1 chrII:60878-61234 ( 67) GGTGTACAGATGTTA 1 chrV:53534-53898 ( 69) GGTGTTCGGATGTTA 1 chrV:140478-140878 ( 47) AAGGTATGGGTGCTT 1 chrVII:277064-277368 ( 59) GGTGTATGGGTCTAG 1 chrXIII:754425-754744 ( 38) GATGTATGGGGGTAT 1 chrVII:1000349-1000566 ( 49) GGTGTTTGGGTGCTA 1 chrVII:310534-310888 ( 23) GGTGTACAGATGTTA 1 chrIX:316154-316597 ( 25) AATGTATGGGTTCTA 1 chrVII:366099-366408 ( 34) TATGTGTGGGTGTTT 1 chrIV:411274-411632 ( 30) GGGGTGTGGGTGTTT 1 chrXV:901470-901592 ( 59) AATGTACGGGTGAAC 1 chrXII:1012050-1012400 ( 61) GGTGCATGGGTTCTA 1 chrVII:788336-788701 ( 61) TATGCACGGATGTTG 1 chrIV:321700-321949 ( 23) GGTGTACGGAGGTAA 1 chrV:423123-423442 ( 38) GGTGTACGGAGGTAA 1 chrVIII:74987-75356 ( 30) AATGTACAGGTGTGA 1 chrVII:648978-649312 ( 54) GTTGTACGGATGTTT 1 chrXVI:627380-627730 ( 38) GATGCGTGGGTGGTA 1 chrXII:673854-674221 ( 65) GGTGCATGGGTCTAA 1 chrVII:371256-371466 ( 42) GGTGCATGGGTGCCG 1 chrXIII:298587-298824 ( 61) AATGTCTGGGTGTTG 1 chrIII:163466-163866 ( 31) GGTGCGTGGGTGCGG 1 chrXV:882113-882463 ( 58) GGTGCACAGGTGTTT 1 chrXV:1004121-1004373 ( 50) GGTGCAAGGGTGTTT 1 chrXVI:302708-302977 ( 35) GATGTCTGGATGTAC 1 chrXIV:63131-63497 ( 54) AATGTTCGGATGTAA 1 chrV:270383-270613 ( 37) TATGTATGGGTGATA 1 chrX:75381-75481 ( 17) GAGGTGTGGATGTAT 1 chrXV:1025751-1025997 ( 50) GATGAATGGGTGTTC 1 chrX:73415-73515 ( 44) GGTGCAAGGATGTAA 1 chrXVI:575148-575498 ( 25) TGTGTGTGGGTGCTT 1 chrIV:1450942-1451192 ( 66) TATGTACAGGTGTTA 1 chrXII:645793-646143 ( 26) GGTGAATGGGTGTGG 1 chrIV:1401255-1401595 ( 56) TATGTGTGGGTGGAA 1 chrXI:618815-619184 ( 62) GAGGCACGGATGGAA 1 chrXV:167997-168408 ( 36) TAGGCACGGGTGTTT 1 chrXV:866587-866942 ( 42) TTTGTATGGGTGTTA 1 chrXII:65371-65721 ( 4) GATGTACGGCTGTGT 1 chrII:332337-332727 ( 41) ATTGTATGGGTGCAG 1 chrXV:94502-94810 ( 27) ATTGCATGGGTGTTA 1 chrXI:313335-313581 ( 86) GATGTGCAGATGTAA 1 chrXII:48751-49061 ( 47) GATGTACGGATCTTC 1 chrXII:498543-498846 ( 27) GATGCACGGAGGTAA 1 chrXII:897734-898013 ( 36) GAGGTACAGGTGTTG 1 chrXIV:495197-495526 ( 84) AATGTACGGATTGAA 1 chrIII:178357-178641 ( 23) AATGTACAGATGTTT 1 chrXIII:552910-553260 ( 36) GATGTATGGGTCTCA 1 chrVIII:175073-175384 ( 2) GATGTATGGGTCTCA 1 chrIX:99657-99992 ( 36) AATGTACTGGTGTTA 1 chrXV:253815-254103 ( 69) GGTGTACGGATTAAA 1 chrIV:308030-308367 ( 74) TATGTAAGGATGTAA 1 chrX:391834-391934 ( 67) GAGGTCTGGGTGTGG 1 chrII:604151-604446 ( 51) AATGTACAGATGTGT 1 chrIV:117195-117563 ( 39) TATGTATGGGTCTGA 1 chrXV:216256-216680 ( 31) GGTGCTCGGATGTTC 1 chrXI:67778-68053 ( 46) GGTGCACGGATTTCA 1 chrV:362224-362472 ( 50) ATTGTATGGGTTTAA 1 chrVII:856731-856987 ( 55) GGTGTATGGGCGGGT 1 chrXIV:499353-499565 ( 24) GGTGCACTGGTGTTG 1 chrXV:109794-110023 ( 42) GGTTTATGGGTGCAC 1 chrXI:158255-158575 ( 33) TGTGCACGGGTTGAA 1 chrV:491123-491340 ( 37) GGTGTGCGGGCGCTC 1 chrIX:257367-257679 ( 58) GGTGTACAGATGTCG 1 chrIV:579079-579358 ( 36) GGTTTATGGGTGGTA 1 chrXV:779722-780071 ( 19) ATTGTATGGGTTTAT 1 chrXV:978805-979121 ( 25) GATGAATGGGTTCTA 1 chrII:167939-168184 ( 22) TATGTCTGGGTTTTA 1 chrXVI:520182-520531 ( 56) GAGGCCTGGGTGGAA 1 chrVIII:296897-297198 ( 58) GATGTACTGGTGGAC 1 chrIV:836078-836289 ( 48) GAGGTGTGGGTTCTG 1 chrXV:673686-674036 ( 16) GGTGTACGGCTTTTG 1 chrXII:731980-732272 ( 85) GATGCAAGGGTTCGA 1 chrX:651288-651388 ( 57) TATGTATGGGTTAAG 1 chrX:90089-90189 ( 46) CATGTATGGGTGAGA 1 chrVII:919984-920199 ( 47) TATGTCTGGGTTTTT 1 chrXV:968124-968412 ( 51) GGTGCGTGGGCGTGC 1 chrIV:490995-491244 ( 60) AATGATTGGGTGTAA 1 chrXV:780609-780780 ( 63) AATGTATAGGTTCTT 1 chrXIV:241402-241714 ( 53) GGTGTTTAGGTGCTG 1 chrXV:232003-232353 ( 27) CGTGTCTGGGTGTGT 1 chrXVI:699967-700373 ( 12) GATGTAAGGATTCGC 1 chrXVI:280872-281222 ( 80) GATTCATGGGTGGGT 1 chrXV:980568-980853 ( 16) ATTGTATGGGCGTGT 1 chrXII:1018986-1019329 ( 36) AATGTTTGGGTTTCA 1 chrXV:900328-900678 ( 76) GGTGTTTGGGTTAGA 1 chrXII:370630-370930 ( 56) GGTTCATGGGTGGGC 1 chrXV:282001-282322 ( 22) GAGGAGTGGATGCTC 1 chrVIII:103914-104220 ( 38) AATGTGTGGGCTGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRTGTAYGGRTGTWW MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 51245 bayes= 8.5517 E= 2.6e-234 6 -404 144 -111 100 -1404 85 -288 -1404 -1404 -79 154 -1404 -1404 233 -369 -337 13 -1404 131 134 -204 -58 -269 -288 125 -1404 70 -188 -1404 221 -410 -1404 -1404 236 -1404 31 -404 165 -1404 -1404 -271 -304 163 -1404 -245 206 -99 -237 28 -104 100 59 -223 -34 17 58 -79 -34 -14 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRTGTAYGGRTGTWW MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 169 E= 2.6e-234 0.319527 0.011834 0.526627 0.142012 0.609467 0.000000 0.349112 0.041420 0.000000 0.000000 0.112426 0.887574 0.000000 0.000000 0.976331 0.023669 0.029586 0.213018 0.000000 0.757396 0.775148 0.047337 0.130178 0.047337 0.041420 0.461538 0.000000 0.497041 0.082840 0.000000 0.899408 0.017751 0.000000 0.000000 1.000000 0.000000 0.378698 0.011834 0.609467 0.000000 0.000000 0.029586 0.023669 0.946746 0.000000 0.035503 0.810651 0.153846 0.059172 0.236686 0.094675 0.609467 0.461538 0.041420 0.153846 0.343195 0.455621 0.112426 0.153846 0.278107 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRTGTAYGGRTGTWW MEME-3 regular expression -------------------------------------------------------------------------------- [GA][AG]TG[TC]A[TC]GG[GA]TG[TC][AT][AT] -------------------------------------------------------------------------------- Time 962.31 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:411274-411632 1.76e-03 29_[-3(2.02e-06)]_13_[-3(6.85e-05)]_\ 28 chrXIV:374752-375031 3.63e-04 35_[+1(2.15e-07)]_47 chrXI:326419-326769 5.86e-01 100 chrVII:366099-366408 1.23e-03 15_[+3(1.04e-05)]_3_[+3(2.02e-06)]_\ 52 chrIV:836078-836289 1.56e-03 47_[+3(1.91e-05)]_38 chrIII:163466-163866 1.00e-03 30_[+3(2.84e-06)]_15_[+3(2.43e-05)]_\ 25 chrVI:221752-222059 1.24e-03 64_[+3(8.74e-07)]_21 chrXV:424440-424561 8.11e-01 100 chrXV:80609-80959 7.27e-01 100 chrIV:520819-521113 3.83e-02 100 chrX:396651-396751 4.33e-03 19_[-1(7.15e-07)]_63 chrIV:410234-410507 3.56e-05 66_[+1(1.15e-08)]_16 chrVIII:388809-389163 4.12e-03 33_[-1(2.81e-06)]_49 chrXIII:145901-146266 1.60e-04 48_[-3(2.43e-07)]_15_[-3(1.25e-05)]_\ 7 chrXII:232823-232969 6.86e-02 100 chrVI:210524-210866 2.05e-01 100 chrXV:109794-110023 2.49e-03 41_[+3(1.25e-05)]_44 chrVII:845486-845830 5.37e-09 48_[+1(7.15e-07)]_7_[+2(9.82e-10)]_\ 3 chrXIII:550794-551144 9.52e-01 100 chrXVI:622455-622804 2.31e-04 26_[-1(2.15e-07)]_56 chrXII:369851-369975 2.47e-03 2_[+1(3.20e-05)]_80 chrXV:353940-354265 5.46e-11 2_[-2(8.06e-09)]_9_[-1(2.76e-09)]_\ 47 chrII:477078-477452 1.72e-03 16_[-3(7.59e-07)]_69 chrIV:802622-802874 9.53e-07 46_[-2(3.36e-09)]_30 chrXIV:408391-408741 7.54e-01 100 chrVI:137336-137704 1.10e-09 29_[-2(2.15e-08)]_10_[-1(1.15e-08)]_\ 19 chrVIII:444634-444984 1.74e-01 100 chrXV:424255-424403 1.68e-01 100 chrXI:46683-46958 9.15e-02 100 chrIX:79377-79727 5.41e-01 100 chrXVI:627380-627730 1.32e-03 37_[+3(2.55e-06)]_48 chrXVI:775674-775992 4.57e-01 100 chrXII:921740-921940 4.23e-03 49_[+3(1.26e-06)]_36 chrXV:79780-80129 2.33e-04 43_[+3(2.92e-07)]_42 chrXVI:188639-188918 1.93e-04 59_[-3(1.12e-06)]_26 chrXV:217895-218245 3.89e-02 100 chrVIII:175073-175384 1.20e-02 1_[-3(6.54e-06)]_84 chrIV:230159-230509 3.27e-01 100 chrXV:167997-168408 1.22e-02 35_[+3(4.38e-06)]_2_[-3(6.85e-05)]_\ 33 chrXVI:404625-404779 1.78e-03 51_[-3(4.45e-07)]_34 chrXV:710046-710330 7.16e-01 100 chrXIV:772025-772275 5.47e-01 100 chrVIII:358396-358735 1.29e-03 28_[-1(2.15e-07)]_54 chrII:181369-181620 8.06e-04 48_[-3(3.37e-07)]_37 chrXII:199224-199574 2.99e-01 100 chrXV:1073511-1073861 9.67e-01 100 chrXV:622088-622438 8.64e-01 100 chrXII:1012050-1012400 1.54e-03 60_[-3(2.27e-06)]_25 chrVII:794274-794568 3.38e-05 53_[+1(3.93e-09)]_29 chrI:142895-143245 5.55e-01 100 chrVIII:35466-35816 4.13e-01 100 chrXII:605200-605581 6.81e-04 66_[-1(8.80e-07)]_16 chrIV:1163755-1164105 1.13e-01 100 chrIV:44236-44586 2.60e-01 100 chrXII:592436-592743 6.06e-06 54_[-1(1.93e-09)]_28 chrXIII:302848-303077 4.66e-02 100 chrV:443130-443382 2.60e-13 9_[-2(3.03e-11)]_10_[-1(1.10e-09)]_\ 39 chrIX:197435-197746 9.33e-01 100 chrXII:513260-513610 6.68e-02 100 chrIII:123461-123793 2.11e-07 13_[-2(4.22e-09)]_8_[-1(8.03e-05)]_\ 37 chrIII:295379-295611 1.50e-10 46_[+1(2.76e-09)]_9_[+2(8.06e-09)]_\ 3 chrVII:883457-883807 3.40e-01 100 chrXII:781483-781845 1.60e-03 23_[+3(4.17e-05)]_3_[+3(1.43e-06)]_\ 44 chrXIII:224093-224330 8.00e-04 28_[+3(2.11e-07)]_10_[+3(4.83e-06)]_\ 32 chrXII:731980-732272 3.82e-08 21_[+1(1.93e-09)]_45_[+3(2.25e-05)]_\ 1 chrIV:437605-437941 2.86e-06 56_[+1(2.90e-10)]_26 chrIV:992678-992985 3.00e-03 58_[+1(7.15e-07)]_24 chrXIII:552910-553260 3.58e-03 35_[-3(6.54e-06)]_50 chrV:78303-78653 3.18e-01 100 chrXII:232527-232660 4.14e-01 100 chrV:250284-250486 4.66e-01 100 chrIX:336272-336577 1.70e-01 100 chrXIV:560603-560822 1.50e-10 44_[-2(8.06e-09)]_9_[-1(2.76e-09)]_\ 5 chrII:89631-89953 4.14e-04 38_[+3(2.02e-06)]_5_[+3(5.40e-08)]_\ 27 chrVII:401463-401624 5.95e-07 47_[-2(2.76e-10)]_29 chrVII:254173-254524 4.16e-05 27_[-3(5.96e-07)]_6_[+3(7.59e-07)]_\ 37 chrX:538432-538532 9.17e-06 65_[+2(1.47e-08)]_11 chrX:690633-690733 4.55e-05 70_[-3(3.49e-08)]_15 chrV:431057-431514 2.43e-01 100 chrIV:667887-668113 3.94e-08 70_[-2(3.03e-11)]_6 chrXII:241644-241997 1.27e-03 34_[-3(3.86e-07)]_6_[-3(5.34e-06)]_\ 30 chrXIV:721120-721470 6.95e-01 100 chrVI:180789-181195 5.37e-09 45_[-2(9.82e-10)]_7_[-1(7.15e-07)]_\ 6 chrVII:648978-649312 1.12e-03 38_[+3(4.83e-06)]_[+3(2.55e-06)]_32 chrXVI:302708-302977 1.86e-02 34_[-3(3.17e-06)]_51 chrIX:210656-210830 3.94e-08 7_[+2(3.03e-11)]_69 chrVII:479893-480243 8.91e-02 100 chrII:680331-680681 1.74e-01 100 chrIII:171377-171727 7.82e-02 100 chrIX:316154-316597 4.29e-03 24_[-3(2.02e-06)]_61 chrIV:579079-579358 3.01e-02 35_[-3(1.49e-05)]_5_[-3(4.83e-05)]_\ 30 chrXIII:168704-169021 7.81e-04 33_[+2(1.40e-07)]_43 chrV:249684-250034 8.94e-01 100 chrXI:162384-162698 1.45e-06 9_[-2(3.72e-10)]_67 chrXV:876855-877205 5.99e-01 100 chrII:350684-350966 5.98e-02 100 chrXIII:728495-728845 6.89e-02 100 chrVII:561586-561694 9.82e-01 100 chrXII:261515-261865 6.60e-02 100 chrIV:1450942-1451192 1.01e-02 65_[+3(3.94e-06)]_20 chrVIII:237744-238101 2.97e-04 41_[-1(2.15e-07)]_41 chrXII:975879-976104 1.65e-05 55_[-2(2.15e-08)]_21 chrVI:220693-221043 8.77e-01 100 chrXIV:241402-241714 8.31e-03 52_[-3(3.33e-05)]_33 chrIX:177741-177896 3.12e-01 100 chrV:396227-396565 2.10e-04 30_[-3(2.92e-07)]_3_[-3(3.59e-05)]_\ 37 chrV:135287-135612 1.02e-10 39_[-2(5.71e-10)]_9_[-1(6.55e-08)]_\ 10 chrXII:261727-262077 3.29e-02 100 chrXIII:163335-163685 8.43e-01 100 chrXII:449739-450089 5.59e-03 48_[+2(3.05e-05)]_28 chrXV:759127-759477 8.48e-01 100 chrIV:117195-117563 9.49e-03 38_[-3(8.69e-06)]_1_[-3(3.59e-05)]_\ 31 chrVII:110437-110810 5.48e-04 65_[-2(1.61e-07)]_11 chrXIII:259057-259402 3.06e-06 34_[-1(2.90e-10)]_48 chrVII:736168-736543 1.45e-06 68_[+2(3.72e-10)]_8 chrVII:310534-310888 2.50e-03 22_[-3(2.02e-06)]_[-3(6.85e-05)]_48 chrIII:293836-294186 9.89e-01 100 chrXVI:575148-575498 1.61e-02 24_[-3(3.94e-06)]_61 chrXI:618815-619184 2.66e-04 31_[-3(1.14e-05)]_15_[+3(4.38e-06)]_\ 24 chrVI:64148-64498 4.05e-01 100 chrXIII:372369-372648 1.51e-07 [-2(1.21e-07)]_10_[-1(2.15e-07)]_48 chrXIII:504725-505087 1.88e-04 46_[+1(1.22e-07)]_36 chrVII:185608-185931 1.02e-10 8_[-2(5.71e-10)]_9_[-1(6.55e-08)]_\ 41 chrXV:160009-160131 1.65e-01 100 chrIV:1150733-1151111 1.39e-06 43_[-1(2.90e-10)]_39 chrXIII:420495-420815 1.57e-04 30_[-1(2.15e-07)]_52 chrIII:48808-49158 3.07e-01 100 chrIV:1402895-1403245 6.81e-01 100 chrXII:637545-637895 5.66e-01 100 chrVII:405418-405675 1.75e-06 7_[+2(3.72e-10)]_69 chrXV:968124-968412 2.04e-03 50_[+3(2.86e-05)]_35 chrXIV:726080-726313 2.63e-05 45_[-1(9.95e-09)]_37 chrXI:99756-99917 9.49e-02 100 chrVII:319747-319935 1.44e-03 23_[+2(1.61e-07)]_53 chrIV:410402-410752 6.75e-01 100 chrIII:292757-293107 9.97e-01 100 chrVIII:74987-75356 6.19e-03 29_[-3(2.55e-06)]_2_[-3(3.33e-05)]_\ 39 chrXV:671100-671410 2.94e-01 100 chrXII:734651-734958 1.78e-05 55_[+1(1.10e-09)]_27 chrXIV:569801-569987 2.60e-13 36_[-2(3.03e-11)]_10_[-1(1.10e-09)]_\ 12 chrXII:522186-522414 3.18e-03 25_[-3(4.38e-06)]_10_[-3(9.91e-07)]_\ 35 chrIV:83391-83687 2.58e-03 66_[+1(7.15e-07)]_16 chrVII:1000349-1000566 1.68e-03 48_[-3(2.02e-06)]_37 chrVIII:382927-383311 4.88e-06 31_[+3(1.40e-08)]_2_[+3(8.69e-06)]_\ 37 chrX:391834-391934 1.51e-02 66_[-3(7.20e-06)]_19 chrX:414813-414913 1.02e-10 38_[+1(6.55e-08)]_9_[+2(5.71e-10)]_\ 11 chrXII:796425-796838 1.49e-03 25_[+3(7.32e-05)]_12_[+3(1.81e-06)]_\ 33 chrX:541406-541506 1.75e-02 100 chrXIV:602244-602475 2.60e-13 10_[+1(1.10e-09)]_10_[+2(3.03e-11)]_\ 38 chrIX:427362-427785 2.20e-01 100 chrVIII:212115-212465 9.30e-01 100 chrIV:568727-569106 1.45e-06 49_[+2(3.72e-10)]_27 chrV:492281-492380 8.21e-01 99 chrXIII:124328-124678 9.82e-03 59_[+3(1.61e-06)]_26 chrVII:856731-856987 8.52e-03 54_[+3(1.14e-05)]_31 chrVII:440633-440969 8.73e-04 30_[-1(2.15e-07)]_52 chrVIII:475615-475922 8.46e-05 1_[-2(5.14e-08)]_75 chrIV:538957-539213 9.34e-04 67_[-3(1.81e-06)]_18 chrIV:154885-155235 2.61e-01 100 chrXIII:754425-754744 6.68e-03 37_[+3(2.02e-06)]_48 chrXII:656855-657144 6.73e-05 31_[-1(1.15e-08)]_51 chrIV:341296-341599 7.82e-05 45_[+3(8.74e-07)]_40 chrIV:1201586-1201930 1.02e-10 49_[+1(6.55e-08)]_9_[+2(5.71e-10)] chrXV:288042-288336 1.01e-01 100 chrIV:668420-668577 2.34e-01 100 chrXV:901470-901592 1.21e-03 58_[+3(2.27e-06)]_27 chrXV:274504-274880 1.12e-06 38_[+1(2.90e-10)]_44 chrX:90089-90189 6.54e-03 45_[-3(2.43e-05)]_40 chrV:99971-100304 2.87e-01 100 chrII:160519-160869 2.93e-01 100 chrXIV:330856-331092 4.13e-03 23_[-3(1.43e-06)]_5_[-3(7.32e-05)]_\ 42 chrVIII:75661-76011 4.87e-01 100 chrXII:282528-282818 2.54e-03 31_[-3(5.14e-07)]_2_[-3(1.76e-05)]_\ 37 chrXII:233740-234090 2.15e-02 100 chrVII:779448-779751 4.30e-01 100 chrXVI:282133-282483 6.53e-01 100 chrIV:1013725-1013960 1.63e-01 100 chrXIII:626429-626779 6.15e-01 100 chrXV:110868-111125 5.14e-06 29_[-2(4.22e-09)]_47 chrXII:784200-784537 8.52e-07 43_[+1(2.90e-10)]_39 chrIII:82434-82590 5.95e-07 13_[-2(2.76e-10)]_63 chrXII:202240-202590 5.62e-01 100 chrVII:661581-661906 2.48e-01 100 chrVII:857324-857629 3.81e-05 39_[-1(1.22e-07)]_43 chrXII:460426-460771 4.20e-01 100 chrVI:162068-162385 4.33e-03 59_[+1(7.15e-07)]_23 chrXV:464358-464632 8.79e-08 12_[+1(2.81e-06)]_38_[+2(1.78e-08)]_\ 8 chrIV:1075375-1075702 2.68e-01 100 chrX:523912-524012 3.06e-06 33_[-1(2.90e-10)]_49 chrVII:882730-883080 4.57e-01 100 chrVI:101374-101547 1.50e-05 30_[+2(1.78e-08)]_46 chrX:233775-233875 1.03e-03 71_[+1(2.57e-07)]_11 chrVIII:555851-556201 7.94e-01 100 chrX:651288-651388 3.49e-02 56_[-3(2.43e-05)]_29 chrV:424708-425058 3.14e-01 100 chrIX:370253-370553 9.16e-01 100 chrXVI:173385-173735 9.19e-01 100 chrXVI:281650-281885 7.92e-03 30_[-3(7.89e-06)]_1_[-3(1.61e-06)]_\ 39 chrVI:226575-226867 1.02e-10 30_[-2(5.71e-10)]_9_[-1(6.55e-08)]_\ 19 chrXI:382214-382446 1.68e-04 22_[-3(1.61e-06)]_41_[-3(1.91e-05)]_\ 7 chrI:167827-168177 5.17e-01 100 chrVII:364928-365278 7.74e-01 100 chrV:434384-434734 9.51e-04 45_[-2(1.61e-07)]_31 chrXVI:280872-281222 5.59e-02 79_[-3(4.49e-05)]_6 chrXII:922119-922529 5.03e-05 42_[-3(1.61e-05)]_11_[-3(1.26e-06)]_\ 17 chrXIII:362933-363228 9.45e-04 67_[+2(1.61e-07)]_9 chrXII:498543-498846 2.62e-02 26_[-3(5.34e-06)]_59 chrX:73415-73515 1.06e-02 43_[-3(3.94e-06)]_42 chrIII:178357-178641 2.56e-02 22_[+3(6.54e-06)]_1_[-3(1.25e-05)]_\ 47 chrIX:248667-249045 4.52e-06 51_[+1(2.90e-10)]_31 chrII:301268-301618 9.12e-01 100 chrXV:232003-232353 2.98e-02 26_[+3(3.59e-05)]_59 chrXVI:574457-574807 6.79e-01 100 chrXV:780609-780780 1.96e-02 62_[+3(3.08e-05)]_23 chrX:74662-74762 9.92e-01 100 chrVIII:505839-506174 7.05e-04 44_[+3(7.59e-07)]_41 chrVII:277064-277368 7.37e-03 58_[-3(2.02e-06)]_27 chrVII:149114-149487 1.68e-03 67_[+3(4.45e-07)]_18 chrIV:1461621-1461806 1.28e-01 100 chrXV:621061-621411 9.83e-01 100 chrXIII:123505-123855 2.22e-01 100 chrIII:308730-308991 1.00e-02 5_[-2(9.45e-05)]_71 chrVIII:40460-40810 6.85e-01 100 chrIX:24788-25138 2.70e-01 100 chrIII:142623-142936 4.33e-03 16_[-1(7.15e-07)]_66 chrXVI:581901-582211 2.58e-04 63_[+1(6.55e-08)]_19 chrVI:167290-167631 1.74e-01 100 chrXV:110252-110602 6.01e-01 100 chrVII:541691-542067 5.77e-07 54_[+2(2.76e-10)]_22 chrX:390952-391052 2.84e-03 19_[-1(7.67e-07)]_63 chrI:81960-82249 1.39e-03 55_[+3(5.14e-07)]_30 chrXV:678856-679166 7.89e-04 48_[+3(6.71e-07)]_37 chrVII:774184-774582 9.72e-10 23_[+1(1.15e-08)]_9_[+2(3.36e-08)]_\ 26 chrVII:319175-319525 2.19e-01 100 chrX:355205-355305 1.45e-06 40_[+2(3.72e-10)]_36 chrVII:738967-739279 9.28e-06 56_[+1(1.10e-09)]_26 chrXII:202041-202391 3.25e-01 100 chrXIII:747802-748124 5.41e-01 100 chrIV:323073-323423 7.96e-01 100 chrIX:255235-255585 8.60e-03 41_[+1(7.75e-05)]_41 chrIV:308030-308367 5.26e-03 53_[-3(6.85e-05)]_5_[-3(7.20e-06)]_\ 12 chrII:645013-645315 2.67e-01 100 chrIV:1355749-1355969 5.08e-04 29_[+3(4.48e-08)]_9_[+3(2.92e-07)]_\ 32 chrXII:426972-427285 1.70e-01 100 chrV:52818-53168 8.58e-01 100 chrIII:90752-91061 1.88e-04 10_[+1(1.22e-07)]_72 chrXVI:769106-769475 2.43e-04 36_[-1(3.70e-08)]_46 chrXV:113656-113942 2.26e-05 60_[+1(2.76e-09)]_22 chrXV:447317-447667 5.76e-01 100 chrXV:1025751-1025997 3.88e-03 49_[-3(3.94e-06)]_36 chrV:491123-491340 1.12e-02 36_[-3(1.36e-05)]_49 chrVIII:146121-146324 9.70e-01 100 chrX:139377-139477 8.70e-01 100 chrX:663965-664065 6.85e-01 100 chrIII:168230-168546 1.57e-01 100 chrXI:67778-68053 2.72e-02 45_[-3(1.04e-05)]_40 chrIII:177521-177871 4.35e-01 100 chrV:423123-423442 3.26e-03 37_[-3(2.55e-06)]_48 chrVII:323831-324021 6.03e-01 100 chrVI:157867-158167 1.22e-03 14_[-1(2.15e-07)]_68 chrII:605747-606105 7.65e-04 37_[-3(5.14e-07)]_48 chrXVI:560074-560423 1.20e-08 13_[-2(1.21e-07)]_28_[-1(2.15e-07)]_\ 17 chrIII:50731-51081 2.49e-01 100 chrXVI:308963-309313 8.33e-01 100 chrVIII:411194-411544 3.29e-01 100 chrV:438556-438855 1.34e-03 52_[+1(2.15e-07)]_30 chrVII:205354-205710 1.88e-04 46_[+1(1.22e-07)]_36 chrXIII:572763-573114 2.17e-07 8_[-2(5.58e-08)]_9_[-1(7.67e-07)]_\ 41 chrXII:48751-49061 2.85e-02 46_[+3(5.34e-06)]_39 chrXIII:762097-762447 4.52e-01 100 chrVII:706985-707203 2.63e-01 100 chrVI:65015-65322 1.96e-03 25_[+3(8.69e-06)]_8_[+3(3.37e-07)]_\ 37 chrXV:673686-674036 2.38e-02 15_[+3(2.25e-05)]_70 chrIV:321700-321949 9.50e-03 22_[-3(2.55e-06)]_11_[-3(1.25e-05)]_\ 37 chrVII:148235-148585 8.67e-01 100 chrIV:221963-222292 6.00e-06 57_[+3(4.48e-08)]_28 chrXII:628222-628603 1.88e-04 28_[+1(1.22e-07)]_54 chrXVI:744130-744468 3.40e-05 68_[+2(1.12e-07)]_8 chrV:140478-140878 4.72e-03 46_[+3(2.02e-06)]_22_[+3(1.49e-05)]_\ 2 chrV:305809-306208 6.26e-03 24_[-3(1.12e-06)]_1_[-3(3.94e-06)]_\ 45 chrXVI:435799-436130 5.60e-01 100 chrII:393522-393872 3.60e-01 100 chrXVI:856896-857062 3.86e-04 7_[+2(3.36e-08)]_69 chrXI:313335-313581 2.18e-06 6_[-2(1.61e-07)]_55_[-3(5.34e-06)] chrX:75381-75481 1.24e-04 16_[+3(3.53e-06)]_27_[+3(4.38e-06)]_\ 27 chrXVI:338788-339067 4.77e-01 100 chrVII:544488-544809 4.68e-02 100 chrVII:730980-731330 1.10e-09 39_[+1(1.15e-08)]_10_[+2(2.15e-08)]_\ 9 chrXI:74476-74790 1.10e-09 48_[+1(1.15e-08)]_10_[+2(2.15e-08)] chrXIV:568001-568312 8.79e-08 16_[+1(2.81e-06)]_39_[+2(1.78e-08)]_\ 3 chrIV:945857-945963 3.40e-01 100 chrVII:534828-535196 3.42e-03 41_[+3(8.74e-07)]_44 chrII:604151-604446 3.84e-03 34_[-3(1.36e-05)]_1_[-3(8.69e-06)]_\ 35 chrXV:94502-94810 2.92e-02 26_[-3(5.34e-06)]_59 chrXIV:776646-776996 2.54e-01 100 chrXIV:575276-575626 1.13e-01 100 chrVIII:85099-85449 8.59e-01 100 chrXVI:406219-406535 3.12e-03 41_[-3(1.26e-06)]_44 chrVI:95484-95845 3.38e-04 21_[+3(5.14e-07)]_64 chrXVI:860211-860553 4.33e-03 54_[+1(7.15e-07)]_28 chrII:226950-227264 2.49e-06 25_[+1(2.90e-10)]_57 chrXVI:572098-572468 1.65e-09 43_[+1(7.15e-07)]_7_[+2(9.82e-10)]_\ 8 chrV:86427-86773 2.63e-06 61_[+1(2.90e-10)]_21 chrX:378194-378294 4.37e-04 67_[+1(2.15e-07)]_15 chrV:69083-69322 5.86e-06 27_[+3(4.45e-07)]_58 chrIV:1095250-1095615 3.30e-07 1_[-2(8.27e-07)]_28_[-1(2.15e-07)]_\ 29 chrXII:167871-168182 3.06e-06 23_[-1(2.90e-10)]_59 chrIV:1401255-1401595 1.40e-02 40_[-3(4.83e-05)]_[-3(4.38e-06)]_30 chrVII:930914-931170 2.51e-03 5_[-1(7.15e-07)]_77 chrXII:65371-65721 5.95e-03 3_[+3(4.83e-06)]_82 chrXI:614876-615150 4.86e-01 100 chrV:138501-138913 1.45e-06 42_[+2(3.72e-10)]_34 chrXII:233408-233579 3.39e-01 100 chrXV:620458-620808 7.86e-01 100 chrIV:1256957-1257111 9.34e-07 37_[-2(1.98e-07)]_39 chrXII:448536-448883 1.87e-07 4_[-2(3.36e-09)]_72 chrXIII:551371-551783 3.65e-03 [+3(5.14e-07)]_[+3(2.25e-05)]_43_\ [-3(3.59e-05)]_12 chrXII:1052009-1052227 2.60e-13 16_[-2(3.03e-11)]_10_[-1(1.10e-09)]_\ 32 chrVII:550295-550645 7.94e-01 100 chrVII:123721-124071 8.99e-01 100 chrXIV:519002-519126 7.88e-01 100 chrIX:324222-324538 1.70e-01 100 chrVI:83336-83686 6.81e-01 100 chrXIII:500264-500614 9.08e-01 100 chrVII:422921-423291 5.53e-05 43_[+1(1.22e-07)]_39 chrVI:191476-191736 2.70e-06 31_[-1(2.90e-10)]_51 chrX:415873-415973 3.20e-02 25_[+2(3.61e-05)]_51 chrXV:161138-161402 3.36e-03 25_[+3(1.12e-06)]_60 chrII:72531-72881 1.29e-01 100 chrIV:1305469-1305792 2.70e-06 57_[+1(2.90e-10)]_25 chrII:256434-256784 6.96e-01 100 chrX:424353-424453 3.06e-05 21_[-1(9.95e-09)]_61 chrXV:300929-301306 2.18e-03 37_[+1(2.81e-06)]_45 chrXV:900328-900678 1.08e-01 75_[-3(5.57e-05)]_10 chrXII:818484-818754 9.92e-05 73_[+2(1.36e-06)]_3 chrXII:1018986-1019329 2.85e-02 35_[+3(4.83e-05)]_50 chrXIII:170908-171258 3.77e-01 100 chrV:53534-53898 1.12e-02 50_[-3(6.54e-06)]_3_[+3(2.02e-06)]_\ 17 chrXII:876536-876886 5.11e-01 100 chrXIII:511284-511634 1.74e-01 100 chrXVI:821730-822080 7.62e-01 100 chrVII:1004081-1004370 2.52e-05 74_[+2(1.12e-07)]_2 chrXVI:689407-689772 3.33e-06 33_[+1(2.90e-10)]_49 chrXIV:716079-716429 7.62e-01 100 chrV:176936-177309 5.95e-07 60_[+2(2.76e-10)]_16 chrXI:159023-159373 2.78e-01 100 chrX:606437-606537 6.69e-01 100 chrXI:518905-519187 2.50e-02 100 chrXIII:761897-762247 7.25e-01 100 chrXIII:831565-831915 5.89e-01 100 chrXV:438492-438858 3.86e-08 25_[+1(3.70e-08)]_32_[+2(1.12e-06)]_\ 1 chrXV:228167-228472 9.12e-05 69_[+1(1.15e-08)]_13 chrXV:976355-976574 2.17e-07 14_[+1(7.67e-07)]_9_[+2(5.58e-08)]_\ 35 chrXV:444883-445233 4.13e-01 100 chrV:551223-551467 2.60e-13 3_[-2(3.03e-11)]_10_[-1(1.10e-09)]_\ 45 chrXI:379527-379836 3.55e-04 56_[+1(2.15e-07)]_26 chrXV:594283-594583 1.05e-01 100 chrIV:323274-323624 9.63e-01 100 chrIV:1237607-1237957 1.41e-01 100 chrXIV:586082-586432 5.58e-01 100 chrXV:1004121-1004373 6.61e-04 49_[+3(3.17e-06)]_36 chrII:803242-803592 7.19e-01 100 chrI:166141-166451 1.94e-11 28_[+1(3.93e-09)]_9_[+2(9.82e-10)]_\ 21 chrXII:1028254-1028556 9.94e-03 40_[-3(1.81e-06)]_2_[+3(2.25e-05)]_\ 28 chrX:652230-652330 4.22e-01 100 chrV:354769-355061 9.23e-01 100 chrXV:254447-254797 3.65e-01 100 chrXI:302747-303157 1.45e-01 100 chrXIV:96122-96459 5.14e-06 14_[-2(4.22e-09)]_62 chrIV:355687-356037 5.32e-01 100 chrV:441828-442568 3.21e-01 100 chrXIV:301752-301952 3.99e-01 100 chrXV:226513-226840 1.03e-03 29_[-1(7.15e-07)]_53 chrIV:130597-130958 8.91e-03 21_[+3(1.61e-06)]_64 chrIII:138649-138999 2.45e-01 100 chrXIII:91605-92067 7.69e-01 100 chrXVI:649097-649447 1.59e-01 100 chrXIV:499353-499565 3.29e-03 23_[+3(1.25e-05)]_62 chrVII:726439-726762 3.75e-03 34_[-3(1.61e-06)]_2_[-3(9.91e-07)]_\ 34 chrXI:614098-614448 5.88e-04 77_[-3(2.43e-07)]_8 chrXV:92953-93272 1.94e-04 23_[+3(2.84e-06)]_11_[+3(8.74e-07)]_\ 36 chrII:45020-45344 2.53e-03 35_[-3(5.14e-07)]_5_[+3(6.54e-06)]_\ 30 chrXV:1028712-1029072 5.33e-03 64_[+3(8.74e-07)]_21 chrIII:149748-150084 5.47e-01 100 chrXVI:731942-732292 1.18e-03 34_[-3(1.43e-06)]_51 chrVIII:132957-133275 5.77e-07 15_[-1(2.90e-10)]_67 chrIV:645104-645218 3.55e-06 55_[-2(3.36e-09)]_21 chrXIII:463412-463695 1.70e-01 100 chrXIV:89232-89364 9.93e-01 100 chrXIII:290647-290962 2.32e-01 100 chrXIII:298587-298824 5.22e-03 60_[-3(2.84e-06)]_25 chrII:309108-309458 1.07e-01 100 chrVII:122132-122473 1.02e-10 24_[+1(6.55e-08)]_9_[+2(5.71e-10)]_\ 25 chrIV:1017091-1017448 3.96e-06 1_[-2(2.76e-10)]_75 chrXIV:102572-102911 1.10e-09 32_[+1(1.15e-08)]_10_[+2(2.15e-08)]_\ 16 chrXI:308067-308356 8.52e-04 30_[-1(2.15e-07)]_52 chrXI:431383-431640 7.05e-04 30_[-3(1.26e-07)]_4_[-3(8.36e-05)]_\ 36 chrXIII:225380-225721 2.73e-05 42_[-3(1.26e-07)]_11_[+2(9.74e-05)]_\ 8 chrIX:325589-325920 1.56e-05 51_[+1(2.76e-09)]_31 chrV:91497-91847 7.02e-01 100 chrXIII:808137-808467 2.77e-06 7_[-2(4.35e-08)]_69 chrVIII:466907-467126 4.08e-05 57_[+2(7.68e-08)]_19 chrXIII:480499-480849 1.02e-10 10_[-2(5.71e-10)]_9_[-1(6.55e-08)]_\ 39 chrXVI:76359-76693 1.56e-03 66_[+3(2.92e-07)]_19 chrXII:952748-953098 4.34e-01 100 chrII:60878-61234 1.08e-02 66_[+3(2.02e-06)]_19 chrVIII:103914-104220 3.77e-02 37_[-3(9.52e-05)]_48 chrXII:932110-932462 6.94e-04 22_[+3(1.26e-07)]_1_[+3(5.40e-08)]_\ 10_[+3(8.74e-07)]_22 chrXII:262848-263064 1.87e-03 36_[-3(2.07e-05)]_5_[-3(3.86e-07)]_\ 29 chrXI:158255-158575 3.72e-02 32_[-3(1.36e-05)]_6_[-3(4.49e-05)]_\ 32 chrXV:882113-882463 1.19e-02 57_[-3(3.17e-06)]_28 chrXII:710609-710959 8.08e-01 100 chrVII:287264-287614 1.29e-01 100 chrXII:587009-587359 2.05e-01 100 chrIX:388309-388399 9.90e-01 90 chrVII:431657-432007 4.81e-01 100 chrIX:257367-257679 3.69e-02 29_[-3(1.76e-05)]_13_[-3(1.49e-05)]_\ 28 chrXII:214783-215088 1.90e-11 11_[-2(9.82e-10)]_9_[-1(3.93e-09)]_\ 38 chrIX:250620-250970 4.44e-01 100 chrXV:216256-216680 1.61e-02 30_[-3(1.04e-05)]_9_[-3(4.17e-05)]_\ 31 chrVIII:148952-149231 5.19e-04 40_[+3(1.43e-06)]_45 chrV:311911-312245 3.10e-11 8_[-2(9.82e-10)]_9_[-1(3.93e-09)]_\ 41 chrVII:328428-328862 5.95e-07 21_[+2(2.76e-10)]_55 chrXII:1029155-1029505 5.83e-01 100 chrXII:818874-819116 2.53e-03 51_[-3(9.91e-07)]_34 chrXVI:405115-405465 8.41e-01 100 chrVII:878630-878971 1.29e-01 100 chrXI:259307-259657 3.34e-01 100 chrXI:517822-518125 5.71e-05 72_[+1(1.15e-08)]_10 chrXV:622709-623059 3.21e-01 100 chrV:487248-487524 5.86e-07 8_[-2(2.76e-10)]_68 chrXVI:210060-210422 5.95e-07 14_[-2(2.76e-10)]_62 chrII:405711-406118 1.45e-06 47_[+2(3.72e-10)]_29 chrIV:1360161-1360511 4.06e-01 100 chrXII:838568-838918 7.49e-01 100 chrIII:30757-31107 9.48e-01 100 chrIII:127559-127876 7.68e-05 56_[+1(1.15e-08)]_26 chrXII:513502-513852 2.79e-01 100 chrXIV:442870-443199 1.88e-04 29_[+1(1.22e-07)]_53 chrIV:490995-491244 1.53e-02 59_[-3(3.08e-05)]_26 chrXII:837853-838203 5.30e-01 100 chrII:134595-134945 2.32e-02 100 chrVIII:134171-134490 1.87e-07 74_[+2(3.36e-09)]_2 chrVIII:116011-116347 1.46e-05 24_[-1(2.76e-09)]_58 chrIV:1062772-1063122 2.30e-05 5_[+2(2.24e-05)]_30_[+3(3.37e-07)]_\ 26 chrXI:140896-141242 5.95e-07 12_[-2(2.76e-10)]_64 chrVII:115334-115676 2.43e-04 40_[+1(3.70e-08)]_42 chrXV:978805-979121 7.33e-03 24_[+3(1.61e-05)]_61 chrIV:229539-229753 6.03e-04 31_[-3(2.02e-06)]_9_[-3(8.54e-08)]_\ 30 chrX:703271-703371 1.07e-03 29_[+3(7.89e-06)]_14_[+3(3.37e-07)]_\ 27 chrXIII:296808-297119 2.15e-04 50_[-3(1.26e-07)]_35 chrXV:797063-797257 7.93e-01 100 chrXV:866587-866942 4.12e-04 21_[-3(1.61e-05)]_5_[+3(4.83e-06)]_\ 44 chrXV:980568-980853 2.00e-03 15_[+3(4.83e-05)]_[+1(6.45e-05)]_52 chrXI:458443-458788 7.33e-02 100 chrXI:758-1108 6.50e-01 100 chrVII:788336-788701 3.29e-03 60_[+3(2.55e-06)]_25 chrXII:459526-460061 8.59e-02 2_[+1(7.21e-05)]_80 chrV:288334-288682 4.52e-06 40_[-1(2.90e-10)]_42 chrX:139579-139679 5.46e-01 100 chrXI:84060-84355 3.11e-06 58_[+1(9.95e-09)]_24 chrVIII:62602-62905 7.33e-01 100 chrXVI:56085-56370 3.26e-05 5_[-2(7.68e-08)]_47_[+2(3.61e-05)] chrXIII:879138-879488 4.89e-01 100 chrX:204578-204678 1.75e-02 100 chrVIII:125936-126303 6.85e-04 30_[-3(1.81e-07)]_55 chrIV:125295-125645 6.22e-04 57_[+3(6.71e-07)]_28 chrXI:490797-491116 4.11e-04 69_[+1(2.57e-07)]_13 chrXIV:495197-495526 1.40e-03 66_[+3(9.55e-06)]_2_[+3(6.54e-06)]_\ 2 chrXVI:481482-481832 5.51e-01 100 chrIV:946282-946571 9.15e-01 100 chrV:397468-397818 6.88e-01 100 chrXII:366088-366387 9.46e-01 100 chrXVI:699967-700373 7.37e-03 11_[-3(4.17e-05)]_20_[-3(6.85e-05)]_\ 39 chrXII:645793-646143 1.54e-04 25_[-3(4.38e-06)]_60 chrVIII:296897-297198 2.89e-02 57_[-3(1.91e-05)]_28 chrIV:884225-884566 6.81e-04 23_[+1(8.80e-07)]_59 chrII:9442-9716 8.59e-06 61_[+1(9.95e-09)]_21 chrV:434609-434959 4.65e-01 100 chrXII:441192-441542 8.72e-01 100 chrV:131032-131314 2.83e-01 100 chrV:85866-86216 2.54e-01 100 chrIV:1301588-1301938 8.22e-01 100 chrX:422785-422885 1.03e-03 56_[+1(7.67e-07)]_26 chrVII:371256-371466 1.99e-03 41_[-3(2.84e-06)]_44 chrXIII:732054-732373 1.99e-03 40_[-3(4.45e-07)]_3_[+3(1.04e-05)]_\ 27 chrIII:151216-151515 6.09e-04 15_[-1(6.55e-08)]_67 chrXV:663720-664034 5.46e-04 32_[-1(2.15e-07)]_50 chrVII:481488-481838 9.19e-01 100 chrXVI:279958-280308 1.54e-03 28_[-3(1.26e-06)]_57 chrV:270383-270613 1.75e-02 36_[-3(3.53e-06)]_24_[-3(2.07e-05)]_\ 10 chrVI:155917-156222 1.17e-01 100 chrXIII:650798-651148 2.55e-04 55_[-3(2.14e-08)]_30 chrIV:356368-356718 8.10e-01 100 chrV:51969-52319 8.97e-01 100 chrXIV:63131-63497 6.94e-03 53_[+3(3.53e-06)]_32 chrIV:1300957-1301320 5.76e-04 18_[-3(1.12e-06)]_3_[+3(3.33e-05)]_\ 49 chrXII:92500-92667 9.32e-03 22_[+1(2.81e-06)]_60 chrXV:340196-340534 4.23e-05 30_[-1(2.57e-07)]_52 chrIV:322485-322835 3.93e-01 100 chrXV:779722-780071 1.53e-02 18_[+3(1.61e-05)]_21_[-3(4.17e-05)]_\ 31 chrVII:919984-920199 8.68e-02 28_[-3(3.59e-05)]_3_[-3(2.64e-05)]_\ 39 chrXVI:75587-75937 8.09e-01 100 chrXVI:520182-520531 2.17e-02 26_[+3(8.36e-05)]_14_[-3(1.91e-05)]_\ 30 chrX:227981-228081 3.59e-01 100 chrXIV:500458-500701 5.00e-01 100 chrX:265456-265556 8.29e-04 32_[+3(1.61e-06)]_53 chrVIII:34702-35052 9.27e-01 100 chrXII:897734-898013 2.97e-02 35_[-3(5.93e-06)]_50 chrIV:488577-489028 2.31e-04 58_[-2(7.68e-08)]_18 chrXIII:887043-887393 4.73e-01 100 chrVII:851073-851423 7.56e-01 100 chrXIII:131711-132063 1.45e-06 1_[-2(3.72e-10)]_75 chrXII:797009-797334 7.77e-01 100 chrXV:282001-282322 1.28e-04 21_[+3(9.52e-05)]_24_[+1(7.15e-07)]_\ 22 chrVII:311198-311548 9.76e-01 100 chrV:469299-469596 1.18e-03 67_[+1(2.15e-07)]_15 chrV:362224-362472 9.05e-03 49_[-3(1.14e-05)]_36 chrXII:875233-875545 2.43e-04 44_[+1(3.70e-08)]_38 chrVI:82500-82850 7.55e-02 100 chrIV:465228-465447 2.54e-01 100 chrVIII:34502-34852 2.58e-01 100 chrXV:253815-254103 3.19e-03 35_[-3(4.49e-05)]_18_[+3(7.20e-06)]_\ 17 chrI:142642-142992 5.00e-01 100 chrXIII:195989-196317 2.75e-03 41_[-1(2.81e-06)]_41 chrXIV:631770-632040 2.11e-07 4_[-2(4.22e-09)]_8_[-1(8.03e-05)]_\ 46 chrXII:673854-674221 2.94e-03 64_[-3(2.84e-06)]_21 chrVIII:123057-123407 3.36e-01 100 chrV:435666-435953 1.02e-10 6_[-2(5.71e-10)]_9_[-1(6.55e-08)]_\ 43 chrV:269374-269724 3.91e-01 100 chrXI:259576-259926 4.72e-01 100 chrXI:108766-109069 1.57e-03 33_[-3(6.39e-05)]_3_[-3(3.86e-07)]_\ 34 chrX:115848-115948 4.45e-01 100 chrIII:293633-293983 9.04e-01 100 chrX:354133-354233 7.19e-05 71_[+2(1.40e-07)]_5 chrXVI:378684-378928 1.41e-04 58_[+3(1.61e-06)]_10_[+3(3.37e-07)]_\ 2 chrXI:364670-365020 5.80e-01 100 chrII:332337-332727 3.22e-03 40_[-3(5.34e-06)]_45 chrXIV:716283-716633 4.69e-01 100 chrX:349033-349133 2.33e-01 100 chrXV:571788-572117 1.70e-01 100 chrIII:162833-163183 8.04e-01 100 chrIV:434190-434437 1.50e-10 14_[-2(8.06e-09)]_9_[-1(2.76e-09)]_\ 35 chrII:88109-88459 8.41e-01 100 chrVII:412201-412522 9.22e-05 30_[-1(2.15e-07)]_52 chrX:157459-157559 2.40e-04 7_[+3(1.01e-07)]_2_[+3(2.74e-08)]_\ 61 chrVIII:451694-451810 3.28e-02 25_[+1(3.84e-05)]_57 chrIII:227782-228143 1.56e-06 37_[+1(2.90e-10)]_45 chrXI:578822-579227 6.72e-04 48_[+2(1.12e-06)]_28 chrXIV:444488-444761 5.67e-03 30_[+3(1.61e-06)]_1_[+3(3.17e-06)]_\ 39 chrXII:1017990-1018340 1.96e-01 100 chrV:139546-139896 8.08e-01 100 chrVI:223947-224170 8.61e-04 48_[+3(3.86e-07)]_37 chrXIII:301642-301992 3.04e-01 100 chrIX:183365-183667 9.45e-06 21_[-1(1.10e-09)]_61 chrVII:823342-823665 1.51e-07 36_[+1(2.15e-07)]_10_[+2(1.21e-07)]_\ 12 chrII:197328-197628 1.48e-05 73_[+1(1.10e-09)]_9 chrII:592911-593272 3.63e-04 26_[+3(6.39e-05)]_2_[+3(1.26e-07)]_\ 42 chrV:117738-118231 7.11e-01 100 chrXI:158819-159169 5.72e-01 100 chrXIV:555105-555455 5.79e-01 100 chrII:681963-682158 1.89e-04 44_[-3(8.54e-08)]_41 chrVII:700509-701193 8.84e-01 100 chrV:85126-85455 2.61e-03 28_[-3(1.14e-05)]_14_[-3(1.81e-06)]_\ 28 chrXIII:159343-159693 6.05e-01 100 chrVII:438584-438893 4.63e-04 46_[+3(3.94e-06)]_8_[+3(1.61e-06)]_\ 16 chrVIII:40226-40576 8.62e-01 100 chrXIII:837765-838082 1.36e-01 100 chrXII:370630-370930 1.11e-02 55_[+3(6.39e-05)]_30 chrXVI:810546-810822 7.09e-05 49_[+1(1.15e-08)]_33 chrIX:300146-300477 5.93e-04 13_[-1(6.55e-08)]_69 chrIV:217205-217502 2.07e-03 8_[-3(1.12e-06)]_77 chrX:617750-617850 6.33e-06 64_[+1(1.93e-09)]_18 chrXII:962904-963207 2.77e-05 24_[-1(9.95e-09)]_58 chrVIII:411427-411777 5.72e-01 100 chrXIII:297966-298316 9.11e-01 100 chrXII:374198-374529 2.28e-07 49_[+1(2.57e-07)]_9_[+2(3.12e-07)] chrX:197212-197312 2.52e-09 1_[-2(3.36e-08)]_9_[-1(1.15e-08)]_\ 48 chrIX:99657-99992 1.15e-02 35_[+3(7.20e-06)]_50 chrV:61769-62105 5.37e-09 16_[-2(9.82e-10)]_7_[-1(7.15e-07)]_\ 35 chrII:167939-168184 3.07e-02 21_[-3(1.91e-05)]_2_[-3(5.57e-05)]_\ 47 chrIV:1359409-1359799 3.27e-03 39_[-3(3.37e-07)]_[-3(1.76e-05)]_31 chrII:415520-415860 1.77e-03 26_[+3(7.82e-05)]_1_[+3(2.11e-07)]_\ 43 chrIV:1352385-1352659 1.02e-10 7_[-2(5.71e-10)]_9_[-1(6.55e-08)]_\ 42 chrX:59040-59140 2.22e-05 20_[-1(2.76e-09)]_62 chrIX:138703-138848 8.91e-01 100 chrXVI:819366-819684 1.90e-05 61_[+1(1.10e-09)]_21 chrX:542867-542967 1.76e-01 100 chrV:141063-141315 3.95e-01 100 chrII:628264-628614 4.75e-01 100 chrII:326715-327029 3.05e-04 25_[-1(4.13e-05)]_57 chrIII:965-1315 1.59e-01 100 chrIV:358122-358407 3.95e-03 34_[+3(1.12e-06)]_51 chrIV:619845-620183 2.28e-07 18_[-2(3.12e-07)]_9_[-1(2.57e-07)]_\ 31 chrIX:68225-68522 4.52e-04 24_[-3(1.26e-07)]_61 chrXIV:632468-632735 1.08e-06 14_[-2(4.00e-05)]_17_[+1(1.15e-08)]_\ 27 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************