Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.02782 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.063626 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.083681 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.029202 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background Finished invoke: name: bg status: 0 time: 0.023539 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 500.423482 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/seqs-shuffled Finished invoke: name: dreme status: 0 time: 53.73021 Invoking: centrimo -seqlen 356 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.184267 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.487701 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background -primary BBNBDTGGYBYAGTGGKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.360413 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background -primary CCSVYRAYCTYCWSATTANDAGTSWGACGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.313282 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background -primary WRATGTAYGGRTGTW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.336966 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background -primary CTYGGCC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.193728 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background -primary CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.192217 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background -primary ACCACKA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.202578 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background -primary ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.232837 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background -primary SGGTTCGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.224358 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background -primary GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.202434 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background -primary ATAGTKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.22588 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background -primary AGCTCAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.194398 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background -primary AAGCGWGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.198159 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background -primary AGCGCMAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.195082 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background -primary CACCGTGS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.196427 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background -primary AGTCAKAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.190433 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/spamo_out_16 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background -primary ATGGGBG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.240707 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/spamo_out_17 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background -primary AAGAAAWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo17 status: 0 time: 0.203341 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/spamo_out_18 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background -primary CGCGTGSC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo18 status: 0 time: 0.20844 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background --motif BBNBDTGGYBYAGTGGKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa Finished invoke: name: fimo1 status: 0 time: 0.183027 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background --motif CCSVYRAYCTYCWSATTANDAGTSWGACGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa Finished invoke: name: fimo2 status: 0 time: 0.200835 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background --motif WRATGTAYGGRTGTW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa Finished invoke: name: fimo3 status: 0 time: 0.179573 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background --motif CTYGGCC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa Finished invoke: name: fimo4 status: 0 time: 0.079375 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background --motif CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa Finished invoke: name: fimo5 status: 0 time: 0.094073 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background --motif ACCACKA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa Finished invoke: name: fimo6 status: 0 time: 0.083598 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background --motif ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa Finished invoke: name: fimo7 status: 0 time: 0.08641 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background --motif SGGTTCGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa Finished invoke: name: fimo8 status: 0 time: 0.099172 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background --motif GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa Finished invoke: name: fimo9 status: 0 time: 0.078503 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background --motif ATAGTKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa Finished invoke: name: fimo10 status: 0 time: 0.097062 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background --motif AGCTCAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa Finished invoke: name: fimo11 status: 0 time: 0.078142 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background --motif AAGCGWGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa Finished invoke: name: fimo12 status: 0 time: 0.080175 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background --motif AGCGCMAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa Finished invoke: name: fimo13 status: 0 time: 0.088748 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background --motif CACCGTGS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa Finished invoke: name: fimo14 status: 0 time: 0.098264 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background --motif AGTCAKAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa Finished invoke: name: fimo15 status: 0 time: 0.093553 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/fimo_out_16 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background --motif ATGGGBG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa Finished invoke: name: fimo16 status: 0 time: 0.09256 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/fimo_out_17 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background --motif AAGAAAWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa Finished invoke: name: fimo17 status: 0 time: 0.088251 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/fimo_out_18 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/background --motif CGCGTGSC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/YJM789--ARR1.fa Finished invoke: name: fimo18 status: 0 time: 0.0933 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ARR1/summary.tsv Finished invoke: name: summary status: 0 time: 0.192999 Done