Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.01155 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.055602 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.067095 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.011851 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background Finished invoke: name: bg status: 0 time: 0.009678 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 585.545391 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/seqs-shuffled Finished invoke: name: dreme status: 0 time: 60.110186 Invoking: centrimo -seqlen 344 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.181832 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.329716 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background -primary GGSCRAGTGGKTTARKGSDHM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.338332 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background -primary TCGAACCSVKGAYCYYMYGRT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.299667 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background -primary WRATGTAYGGRTGTW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.307152 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background -primary CTWRACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.232969 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background -primary GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.190651 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background -primary CRCCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.231058 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background -primary ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.202985 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background -primary ATAGTKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.222886 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background -primary GGYTATCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.20143 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background -primary GTCTGRC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.207885 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background -primary CACCGTGS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.181979 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background -primary AAGGCGCM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.186025 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background -primary TTTCTTB /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.208997 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background -primary GGATTTKA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.197748 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background -primary TGGCGYA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.226132 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/spamo_out_16 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background -primary TAATCAKA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.188727 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/spamo_out_17 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background -primary ACTGAGCT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml Finished invoke: name: spamo17 status: 0 time: 0.18319 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/spamo_out_18 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background -primary CYTGCGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml Finished invoke: name: spamo18 status: 0 time: 0.187294 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background --motif GGSCRAGTGGKTTARKGSDHM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa Finished invoke: name: fimo1 status: 0 time: 0.171923 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background --motif TCGAACCSVKGAYCYYMYGRT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa Finished invoke: name: fimo2 status: 0 time: 0.167682 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background --motif WRATGTAYGGRTGTW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa Finished invoke: name: fimo3 status: 0 time: 0.165211 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background --motif CTWRACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa Finished invoke: name: fimo4 status: 0 time: 0.082138 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background --motif GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa Finished invoke: name: fimo5 status: 0 time: 0.082253 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background --motif CRCCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa Finished invoke: name: fimo6 status: 0 time: 0.068012 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background --motif ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa Finished invoke: name: fimo7 status: 0 time: 0.081516 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background --motif ATAGTKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa Finished invoke: name: fimo8 status: 0 time: 0.081427 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background --motif GGYTATCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa Finished invoke: name: fimo9 status: 0 time: 0.081574 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background --motif GTCTGRC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa Finished invoke: name: fimo10 status: 0 time: 0.080669 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background --motif CACCGTGS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa Finished invoke: name: fimo11 status: 0 time: 0.081589 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background --motif AAGGCGCM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa Finished invoke: name: fimo12 status: 0 time: 0.091447 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background --motif TTTCTTB /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa Finished invoke: name: fimo13 status: 0 time: 0.067923 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background --motif GGATTTKA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa Finished invoke: name: fimo14 status: 0 time: 0.081885 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background --motif TGGCGYA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa Finished invoke: name: fimo15 status: 0 time: 0.081637 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/fimo_out_16 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background --motif TAATCAKA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa Finished invoke: name: fimo16 status: 0 time: 0.081837 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/fimo_out_17 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background --motif ACTGAGCT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa Finished invoke: name: fimo17 status: 0 time: 0.082719 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/fimo_out_18 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/background --motif CYTGCGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/YJM789--AFT2.fa Finished invoke: name: fimo18 status: 0 time: 0.083462 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--AFT2/summary.tsv Finished invoke: name: summary status: 0 time: 0.165239 Done