Invoking:
  getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa 1> $metrics
Finished invoke:
  name: count_seqs  status: 0  time: 0.03919
Invoking:
  fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa 1> $metrics
Finished invoke:
  name: most_seqs  status: 0  time: 0.067911
Invoking:
  fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/seqs-centered
Finished invoke:
  name: center_seqs  status: 0  time: 0.092242
Invoking:
  fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1
Finished invoke:
  name: shuffle_seqs  status: 0  time: 0.015645
Invoking:
  fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background
Finished invoke:
  name: bg  status: 0  time: 0.01802
Invoking:
  meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background -dna -revcomp -nostatus
Finished invoke:
  name: meme  status: 0  time: 510.001601
Invoking:
  dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/seqs-shuffled
Finished invoke:
  name: dreme  status: 0  time: 57.118179
Invoking:
  centrimo -seqlen 340 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml
Finished invoke:
  name: centrimo  status: 0  time: 0.183901
Invoking:
  tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/motif_alignment.txt
Finished invoke:
  name: align  status: 0  time: 0.320063
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background -primary DTGGCBYAGTGGKWWRRGSS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml
Finished invoke:
  name: spamo1  status: 0  time: 0.400239
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background -primary RAGRTCMBSGGTTCGAYYCCS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml
Finished invoke:
  name: spamo2  status: 0  time: 0.32455
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background -primary DRATGTAYGGRTGTW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml
Finished invoke:
  name: spamo3  status: 0  time: 0.345955
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background -primary CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml
Finished invoke:
  name: spamo4  status: 0  time: 0.260889
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background -primary GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml
Finished invoke:
  name: spamo5  status: 0  time: 0.208975
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background -primary CCCATKC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml
Finished invoke:
  name: spamo6  status: 0  time: 0.231732
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background -primary GGTCTCY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml
Finished invoke:
  name: spamo7  status: 0  time: 0.210305
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background -primary CACATYAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml
Finished invoke:
  name: spamo8  status: 0  time: 0.236631
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background -primary TTTTTCW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml
Finished invoke:
  name: spamo9  status: 0  time: 0.212158
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background -primary GGCAACK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml
Finished invoke:
  name: spamo10  status: 0  time: 0.219342
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background -primary ATATTTY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml
Finished invoke:
  name: spamo11  status: 0  time: 0.211255
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background -primary ACSCAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml
Finished invoke:
  name: spamo12  status: 0  time: 0.215017
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background -primary ATCAKAAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml
Finished invoke:
  name: spamo13  status: 0  time: 0.257362
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background -primary ATAGTKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml
Finished invoke:
  name: spamo14  status: 0  time: 0.247108
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background -primary AGCGCMAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml
Finished invoke:
  name: spamo15  status: 0  time: 0.22951
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/spamo_out_16 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background -primary ACTGAGCT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml
Finished invoke:
  name: spamo16  status: 0  time: 0.216093
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background --motif DTGGCBYAGTGGKWWRRGSS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa
Finished invoke:
  name: fimo1  status: 0  time: 0.207389
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background --motif RAGRTCMBSGGTTCGAYYCCS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa
Finished invoke:
  name: fimo2  status: 0  time: 0.193305
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background --motif DRATGTAYGGRTGTW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa
Finished invoke:
  name: fimo3  status: 0  time: 0.394556
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background --motif CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa
Finished invoke:
  name: fimo4  status: 0  time: 0.117674
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background --motif GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa
Finished invoke:
  name: fimo5  status: 0  time: 0.096213
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background --motif CCCATKC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa
Finished invoke:
  name: fimo6  status: 0  time: 0.108577
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background --motif GGTCTCY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa
Finished invoke:
  name: fimo7  status: 0  time: 0.100696
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background --motif CACATYAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa
Finished invoke:
  name: fimo8  status: 0  time: 0.11046
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background --motif TTTTTCW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa
Finished invoke:
  name: fimo9  status: 0  time: 0.089226
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background --motif GGCAACK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa
Finished invoke:
  name: fimo10  status: 0  time: 0.102794
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background --motif ATATTTY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa
Finished invoke:
  name: fimo11  status: 0  time: 0.088071
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background --motif ACSCAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa
Finished invoke:
  name: fimo12  status: 0  time: 0.115731
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background --motif ATCAKAAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa
Finished invoke:
  name: fimo13  status: 0  time: 0.100509
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background --motif ATAGTKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa
Finished invoke:
  name: fimo14  status: 0  time: 0.10323
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background --motif AGCGCMAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa
Finished invoke:
  name: fimo15  status: 0  time: 0.140286
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/fimo_out_16 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/background --motif ACTGAGCT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/YJM789--ACE2.fa
Finished invoke:
  name: fimo16  status: 0  time: 0.112252
Writing output
Invoking:
  meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/YJM789--ACE2/summary.tsv
Finished invoke:
  name: summary  status: 0  time: 0.174397
Done