Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.012119 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.055991 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.067601 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.012616 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background Finished invoke: name: bg status: 0 time: 0.011785 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 650.672102 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/seqs-shuffled Finished invoke: name: dreme status: 0 time: 62.423933 Invoking: centrimo -seqlen 330 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.186367 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.318789 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background -primary DTGGYYBAGTKGKTWRAGSS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.370701 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background -primary RRGRTCMBSGGTTCGAHYCCS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.299855 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background -primary RATGTAYGGRTGTW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.31469 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background -primary CGCCTTAR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.208379 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background -primary ARAAAAAW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.196296 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background -primary ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.200549 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background -primary GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.196489 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background -primary CTATCACR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.216162 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background -primary CACGGTGM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.198469 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background -primary CCASAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.258792 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background -primary ACTGAGCT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.195753 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background -primary ATTAASAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.187877 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background -primary CGSTCTC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.215987 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background -primary AKATCGG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.20781 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background -primary GCMCGGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.19445 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/spamo_out_16 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background -primary RGCCCAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.197455 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background --motif DTGGYYBAGTKGKTWRAGSS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa Finished invoke: name: fimo1 status: 0 time: 0.178247 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background --motif RRGRTCMBSGGTTCGAHYCCS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa Finished invoke: name: fimo2 status: 0 time: 0.179123 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background --motif RATGTAYGGRTGTW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa Finished invoke: name: fimo3 status: 0 time: 0.172347 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background --motif CGCCTTAR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa Finished invoke: name: fimo4 status: 0 time: 0.088152 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background --motif ARAAAAAW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa Finished invoke: name: fimo5 status: 0 time: 0.096913 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background --motif ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa Finished invoke: name: fimo6 status: 0 time: 0.08476 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background --motif GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa Finished invoke: name: fimo7 status: 0 time: 0.085087 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background --motif CTATCACR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa Finished invoke: name: fimo8 status: 0 time: 0.085836 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background --motif CACGGTGM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa Finished invoke: name: fimo9 status: 0 time: 0.085105 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background --motif CCASAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa Finished invoke: name: fimo10 status: 0 time: 0.079063 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background --motif ACTGAGCT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa Finished invoke: name: fimo11 status: 0 time: 0.084156 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background --motif ATTAASAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa Finished invoke: name: fimo12 status: 0 time: 0.08522 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background --motif CGSTCTC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa Finished invoke: name: fimo13 status: 0 time: 0.083423 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background --motif AKATCGG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa Finished invoke: name: fimo14 status: 0 time: 0.084442 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background --motif GCMCGGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa Finished invoke: name: fimo15 status: 0 time: 0.08402 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/fimo_out_16 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/background --motif RGCCCAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/RM11-1A--HSF1.fa Finished invoke: name: fimo16 status: 0 time: 0.109619 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--HSF1/summary.tsv Finished invoke: name: summary status: 0 time: 0.162162 Done