******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--FKH1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrXII:921400-921832 1.0000 100 chrIV:340252-340553 1.0000 100 chrIV:333751-334235 1.0000 100 chrV:438570-438898 1.0000 100 chrII:548566-548758 1.0000 100 chrXVI:286203-286705 1.0000 100 chrXIV:102565-102936 1.0000 100 chrX:139152-139252 1.0000 100 chrIV:1236486-1237734 1.0000 100 chrX:354120-354220 1.0000 100 chrVII:319717-320003 1.0000 100 chrIV:1078135-1078303 1.0000 100 chrI:141617-141958 1.0000 100 chrXV:1028725-1029097 1.0000 100 chrXIII:667627-668111 1.0000 100 chrVII:730983-731352 1.0000 100 chrVIII:512069-512193 1.0000 100 chrXII:92405-92762 1.0000 100 chrVIII:119709-120028 1.0000 100 chrV:435615-435983 1.0000 100 chrXII:636753-640162 1.0000 100 chrXII:232066-234356 1.0000 100 chrXVI:121132-121559 1.0000 100 chrIX:77839-78009 1.0000 100 chrVIII:381430-382259 1.0000 100 chrIV:1305513-1305839 1.0000 100 chrII:613275-613759 1.0000 100 chrXI:101563-101895 1.0000 100 chrX:408995-409095 1.0000 100 chrXV:819978-820462 1.0000 100 chrXI:42820-43304 1.0000 100 chrIV:1150712-1151071 1.0000 100 chrVI:82592-84350 1.0000 100 chrVII:14208-14597 1.0000 100 chrII:122017-122379 1.0000 100 chrXII:446647-447131 1.0000 100 chrIII:127554-127907 1.0000 100 chrVII:610646-610996 1.0000 100 chrVII:405401-405683 1.0000 100 chrXII:348058-348694 1.0000 100 chrXIII:220332-220592 1.0000 100 chrXII:263382-264026 1.0000 100 chrXV:282030-282332 1.0000 100 chrII:256213-256955 1.0000 100 chrXIII:753124-753453 1.0000 100 chrII:161613-161756 1.0000 100 chrXIII:499114-500633 1.0000 100 chrII:235087-235470 1.0000 100 chrVIII:498752-499055 1.0000 100 chrIV:953263-953747 1.0000 100 chrXIV:493623-493998 1.0000 100 chrX:355217-355317 1.0000 100 chrXI:617778-617992 1.0000 100 chrXV:725311-725667 1.0000 100 chrXVI:376867-377351 1.0000 100 chrXI:284072-284772 1.0000 100 chrIV:453765-454068 1.0000 100 chrXII:282772-283886 1.0000 100 chrVII:1020998-1021212 1.0000 100 chrXIII:123413-123796 1.0000 100 chrXII:855826-857431 1.0000 100 chrIX:25035-25258 1.0000 100 chrI:70611-71023 1.0000 100 chrXVI:860217-860588 1.0000 100 chrX:533741-533841 1.0000 100 chrXIV:283158-283642 1.0000 100 chrIX:255294-255484 1.0000 100 chrXIV:63998-64242 1.0000 100 chrXII:930843-931156 1.0000 100 chrI:142253-143539 1.0000 100 chrII:680310-681968 1.0000 100 chrXIV:569769-569993 1.0000 100 chrXI:307822-308371 1.0000 100 chrIII:262696-263116 1.0000 100 chrIX:258638-258841 1.0000 100 chrVII:440505-441001 1.0000 100 chrXVI:641028-641769 1.0000 100 chrX:745060-745160 1.0000 100 chrXIII:118452-118936 1.0000 100 chrVII:544340-544804 1.0000 100 chrVII:442464-442948 1.0000 100 chrXIII:296918-298857 1.0000 100 chrXII:898740-899717 1.0000 100 chrV:67555-68706 1.0000 100 chrXII:234621-235019 1.0000 100 chrXVI:199818-200302 1.0000 100 chrXIV:415575-416103 1.0000 100 chrVII:185590-185904 1.0000 100 chrXIV:661237-661721 1.0000 100 chrXIII:253327-253581 1.0000 100 chrXIV:416831-417315 1.0000 100 chrXI:517821-518116 1.0000 100 chrXVI:432799-434254 1.0000 100 chrXII:710394-710905 1.0000 100 chrXIII:761713-762233 1.0000 100 chrXII:797014-797512 1.0000 100 chrVIII:148100-148442 1.0000 100 chrVI:148088-148247 1.0000 100 chrVII:479243-482969 1.0000 100 chrXV:436390-436818 1.0000 100 chrX:652021-652121 1.0000 100 chrXV:738734-738910 1.0000 100 chrVII:1057340-1057824 1.0000 100 chrV:61039-62119 1.0000 100 chrIII:227802-228409 1.0000 100 chrXII:734974-735310 1.0000 100 chrVII:313008-313325 1.0000 100 chrXII:784189-784566 1.0000 100 chrXIV:661439-661923 1.0000 100 chrXIII:730461-730945 1.0000 100 chrXIII:163633-164052 1.0000 100 chrVII:738945-739320 1.0000 100 chrVII:94689-95173 1.0000 100 chrXI:46640-46937 1.0000 100 chrXIII:164054-164193 1.0000 100 chrVIII:115821-116379 1.0000 100 chrXVI:736578-736908 1.0000 100 chrXVI:95014-95498 1.0000 100 chrV:404191-404675 1.0000 100 chrII:397451-397935 1.0000 100 chrX:703299-703399 1.0000 100 chrIV:322770-323368 1.0000 100 chrX:191451-191551 1.0000 100 chrVII:787065-787287 1.0000 100 chrX:159766-159866 1.0000 100 chrVIII:104997-105671 1.0000 100 chrIV:1162726-1162932 1.0000 100 chrIX:213438-213922 1.0000 100 chrXII:728026-728598 1.0000 100 chrXV:976326-976648 1.0000 100 chrXIII:424732-424899 1.0000 100 chrII:45645-46034 1.0000 100 chrIV:1201582-1201977 1.0000 100 chrXV:29162-30833 1.0000 100 chrXV:87447-88120 1.0000 100 chrXV:908619-908899 1.0000 100 chrXVI:453974-454458 1.0000 100 chrXII:793765-795314 1.0000 100 chrVI:64094-64870 1.0000 100 chrXV:678081-678318 1.0000 100 chrXI:334098-334892 1.0000 100 chrXI:141449-142287 1.0000 100 chrIV:909628-909939 1.0000 100 chrX:454276-454376 1.0000 100 chrIV:572166-572313 1.0000 100 chrXI:307009-307377 1.0000 100 chrVII:878566-878963 1.0000 100 chrXV:892238-892600 1.0000 100 chrXII:459520-460831 1.0000 100 chrIII:13879-14986 1.0000 100 chrXI:163337-164470 1.0000 100 chrVI:223245-223747 1.0000 100 chrVI:199197-199657 1.0000 100 chrX:531684-531784 1.0000 100 chrX:606714-606814 1.0000 100 chrXI:259180-259785 1.0000 100 chrXIV:493889-494266 1.0000 100 chrXIII:226210-226361 1.0000 100 chrXIV:104662-105095 1.0000 100 chrX:415814-415914 1.0000 100 chrIII:137809-139047 1.0000 100 chrVIII:451132-453043 1.0000 100 chrII:333176-333316 1.0000 100 chrXIV:452084-452302 1.0000 100 chrV:122205-122689 1.0000 100 chrXVI:172988-174002 1.0000 100 chrIV:332677-333161 1.0000 100 chrXV:254484-254707 1.0000 100 chrV:67555-68974 1.0000 100 chrIV:1269868-1270466 1.0000 100 chrIV:980828-981175 1.0000 100 chrXII:370817-371374 1.0000 100 chrXIII:698693-699177 1.0000 100 chrVII:592662-592961 1.0000 100 chrV:51691-52261 1.0000 100 chrIV:491855-492071 1.0000 100 chrIV:1080431-1080915 1.0000 100 chrX:172668-172768 1.0000 100 chrXII:440959-441443 1.0000 100 chrXII:1018143-1018798 1.0000 100 chrVIII:104411-104570 1.0000 100 chrIV:913836-914822 1.0000 100 chrVIII:222608-222896 1.0000 100 chrXII:952172-953103 1.0000 100 chrV:441858-442595 1.0000 100 chrXV:92199-92381 1.0000 100 chrXIV:7253-7529 1.0000 100 chrXIV:63406-63640 1.0000 100 chrIII:294684-295051 1.0000 100 chrIV:355246-357314 1.0000 100 chrII:163217-163701 1.0000 100 chrXI:326116-327634 1.0000 100 chrV:138521-139550 1.0000 100 chrXIV:494553-494757 1.0000 100 chrXV:93075-94315 1.0000 100 chrIII:163775-164033 1.0000 100 chrVI:226567-226895 1.0000 100 chrXV:80525-81308 1.0000 100 chrVII:115350-115684 1.0000 100 chrVIII:164026-164510 1.0000 100 chrXI:436608-437092 1.0000 100 chrVII:289344-289687 1.0000 100 chrVII:345808-346683 1.0000 100 chrIII:95944-96314 1.0000 100 chrIII:142113-142472 1.0000 100 chrXIV:229668-230724 1.0000 100 chrIV:386781-387212 1.0000 100 chrXIII:669721-669957 1.0000 100 chrVIII:122588-123072 1.0000 100 chrXIII:252200-252439 1.0000 100 chrVI:220047-220310 1.0000 100 chrXII:373025-373540 1.0000 100 chrXV:444592-446214 1.0000 100 chrXIV:442838-443413 1.0000 100 chrXIII:290648-290989 1.0000 100 chrV:406727-406912 1.0000 100 chrII:405735-406173 1.0000 100 chrXVI:259305-259701 1.0000 100 chrXVI:404693-405815 1.0000 100 chrVIII:145984-146439 1.0000 100 chrXI:614511-614806 1.0000 100 chrVIII:375357-375765 1.0000 100 chrXV:160257-160809 1.0000 100 chrXIV:715934-716645 1.0000 100 chrVII:545204-545719 1.0000 100 chrXIII:753803-753931 1.0000 100 chrXII:1010148-1010632 1.0000 100 chrVIII:147831-148116 1.0000 100 chrIX:316879-317737 1.0000 100 chrIV:555696-556241 1.0000 100 chrX:540359-540459 1.0000 100 chrIV:306832-306954 1.0000 100 chrVII:823337-823669 1.0000 100 chrII:604553-605643 1.0000 100 chrXV:1027876-1028757 1.0000 100 chrXI:100442-100926 1.0000 100 chrIII:177141-177929 1.0000 100 chrIV:1243193-1243315 1.0000 100 chrXV:409531-409682 1.0000 100 chrXI:313304-313607 1.0000 100 chrIV:118403-118677 1.0000 100 chrXV:678318-678493 1.0000 100 chrIV:716545-716897 1.0000 100 chrX:99374-99474 1.0000 100 chrX:391824-391924 1.0000 100 chrIV:599802-600032 1.0000 100 chrV:141004-141363 1.0000 100 chrXIII:288309-289077 1.0000 100 chrXVI:559984-560428 1.0000 100 chrXV:962816-963300 1.0000 100 chrXII:592407-592765 1.0000 100 chrXII:498836-499745 1.0000 100 chrX:73636-73736 1.0000 100 chrXII:369142-370341 1.0000 100 chrXVI:942066-942568 1.0000 100 chrXVI:282254-282738 1.0000 100 chrII:396117-396321 1.0000 100 chrXIII:626134-626943 1.0000 100 chrIX:255884-256255 1.0000 100 chrXVI:775659-775980 1.0000 100 chrVII:774207-774563 1.0000 100 chrIII:248651-249057 1.0000 100 chrII:139297-139490 1.0000 100 chrIV:579369-580603 1.0000 100 chrX:608859-608959 1.0000 100 chrVIII:120918-121799 1.0000 100 chrX:156290-156390 1.0000 100 chrVII:834428-834709 1.0000 100 chrXV:796942-797357 1.0000 100 chrIV:1489052-1489993 1.0000 100 chrVIII:127256-127694 1.0000 100 chrIV:359438-359791 1.0000 100 chrVII:700472-701201 1.0000 100 chrXV:159224-160204 1.0000 100 chrIV:306897-307381 1.0000 100 chrV:99961-100332 1.0000 100 chrII:408436-408920 1.0000 100 chrV:123453-123736 1.0000 100 chrII:87868-88663 1.0000 100 chrVII:110341-110825 1.0000 100 chrXV:503077-503561 1.0000 100 chrXII:875233-875593 1.0000 100 chrXVI:107687-108171 1.0000 100 chrV:397424-397924 1.0000 100 chrIV:466293-466505 1.0000 100 chrII:36240-36596 1.0000 100 chrIV:221366-221655 1.0000 100 chrXIII:302667-302897 1.0000 100 chrVII:779468-779847 1.0000 100 chrIII:82365-82661 1.0000 100 chrXIV:88915-89771 1.0000 100 chrX:348912-349012 1.0000 100 chrV:78005-79219 1.0000 100 chrXV:505083-505389 1.0000 100 chrIV:1268848-1269332 1.0000 100 chrII:40543-40889 1.0000 100 chrX:227726-227826 1.0000 100 chrVII:364212-364470 1.0000 100 chrXVI:303220-304207 1.0000 100 chrXVI:210096-210402 1.0000 100 chrV:305822-306073 1.0000 100 chrIII:57982-58181 1.0000 100 chrXI:617836-618320 1.0000 100 chrX:417148-417248 1.0000 100 chrVII:609297-609998 1.0000 100 chrXVI:297971-298455 1.0000 100 chrX:422788-422888 1.0000 100 chrX:156947-157047 1.0000 100 chrVIII:126518-127002 1.0000 100 chrXII:523074-523420 1.0000 100 chrIV:491612-491856 1.0000 100 chrXV:87447-88053 1.0000 100 chrIII:123413-123797 1.0000 100 chrXVI:701245-701533 1.0000 100 chrXIV:187047-187531 1.0000 100 chrIV:218251-218455 1.0000 100 chrIV:427876-428071 1.0000 100 chrII:306907-307391 1.0000 100 chrXII:515471-515676 1.0000 100 chrIX:25945-26429 1.0000 100 chrII:779481-779737 1.0000 100 chrV:151917-152229 1.0000 100 chrXIV:174133-174673 1.0000 100 chrVI:220735-221040 1.0000 100 chrX:378221-378321 1.0000 100 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1.0000 100 chrVII:599637-599931 1.0000 100 chrX:121152-121252 1.0000 100 chrIV:129951-130547 1.0000 100 chrXIII:123000-123424 1.0000 100 chrIII:315506-316092 1.0000 100 chrXI:106313-106797 1.0000 100 chrXV:900184-900717 1.0000 100 chrXIII:258975-259387 1.0000 100 chrXIII:222647-222941 1.0000 100 chrII:478881-479368 1.0000 100 chrVII:541702-542101 1.0000 100 chrXIII:288965-289539 1.0000 100 chrXIV:414196-414511 1.0000 100 chrVII:398577-400213 1.0000 100 chrXII:837663-839229 1.0000 100 chrXV:842406-842917 1.0000 100 chrII:413903-414325 1.0000 100 chrXV:779850-781052 1.0000 100 chrXV:875269-875654 1.0000 100 chrV:130983-131283 1.0000 100 chrII:236883-237367 1.0000 100 chrXIII:880468-880634 1.0000 100 chrXII:805793-806887 1.0000 100 chrXVI:581925-582429 1.0000 100 chrX:538415-538515 1.0000 100 chrX:197184-197284 1.0000 100 chrXII:709531-709777 1.0000 100 chrIV:1238068-1238373 1.0000 100 chrXII:948006-948229 1.0000 100 chrIV:1256851-1257251 1.0000 100 chrIV:1175707-1176141 1.0000 100 chrXV:506784-507128 1.0000 100 chrXII:358734-359218 1.0000 100 chrXIV:585415-586567 1.0000 100 chrXII:605148-605586 1.0000 100 chrXV:778574-778770 1.0000 100 chrV:302888-303372 1.0000 100 chrX:74476-74576 1.0000 100 chrXI:283087-284181 1.0000 100 chrIII:177141-178014 1.0000 100 chrIV:221582-221934 1.0000 100 chrXVI:718379-719437 1.0000 100 chrX:526537-526637 1.0000 100 chrIII:131858-132147 1.0000 100 chrX:99165-99265 1.0000 100 chrXIII:162960-163564 1.0000 100 chrIV:435033-435331 1.0000 100 chrV:59437-59921 1.0000 100 chrIV:116171-116334 1.0000 100 chrXVI:819322-819813 1.0000 100 chrIV:1269047-1269531 1.0000 100 chrXIV:107133-107374 1.0000 100 chrXIV:351886-352852 1.0000 100 chrI:159757-160141 1.0000 100 chrXII:833620-833962 1.0000 100 chrXVI:650001-650485 1.0000 100 chrIV:468352-468836 1.0000 100 chrVII:533865-534430 1.0000 100 chrVII:364863-365929 1.0000 100 chrXV:277534-277954 1.0000 100 chrVII:148063-148850 1.0000 100 chrXIII:808121-808479 1.0000 100 chrIV:434033-434467 1.0000 100 chrXVI:289172-289544 1.0000 100 chrVII:559341-559825 1.0000 100 chrV:423192-423421 1.0000 100 chrX:75220-75320 1.0000 100 chrII:563876-564360 1.0000 100 chrXI:230100-230584 1.0000 100 chrVI:269824-269947 1.0000 100 chrIV:1013292-1013506 1.0000 100 chrXI:109626-109946 1.0000 100 chrIV:1359547-1359695 1.0000 100 chrIV:323950-324434 1.0000 100 chrXII:366116-366479 1.0000 100 chrVII:855755-856239 1.0000 100 chrVIII:75569-76008 1.0000 100 chrXIII:698639-698803 1.0000 100 chrV:267665-268149 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--FKH1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--FKH1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--FKH1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 531 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 53100 N= 531 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.308 C 0.192 G 0.192 T 0.308 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--FKH1/background): A 0.311 C 0.189 G 0.189 T 0.311 ******************************************************************************** ******************************************************************************** MOTIF TCRKRRGRTCMBSGGTTCGAYYCCS MEME-1 width = 25 sites = 61 llr = 1174 E-value = 9.0e-230 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCRKRRGRTCMBSGGTTCGAYYCCS MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::3246242:3::2::::1a1:::: pos.-specific C 2811::1:18543::::a::35a76 probability G 12444376::2368a:::9:2:::4 matrix T 6:232:1:72:31::aa:::45:2: bits 2.4 * * * 2.2 * * * 1.9 * * * 1.7 * ****** * Relative 1.4 * * ****** * Entropy 1.2 * * * ******* *** (27.8 bits) 1.0 * * * ******** **** 0.7 * *** * ******** **** 0.5 ** **************** **** 0.2 ************************* 0.0 ------------------------- Multilevel TCGGAAGGTCCCGGGTTCGATTCCC consensus CGATGG AATATC CC TG sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCRKRRGRTCMBSGGTTCGAYYCCS MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------- chrIII:123413-123797 - 32 2.28e-14 CGCTTAGGGT GCGGGAGGTCCCGGGTTCGAGTCCC GGCTCGCCCC chrVII:541702-542101 + 36 1.10e-11 CACGCTTTCA CCGTGGAGACCGGGGTTCGACTCCC CGTATCGGAG chrVII:328453-328841 + 23 1.10e-11 CACGCTTTCA CCGTGGAGACCGGGGTTCGACTCCC CGTATCGGAG chrVII:401429-401661 - 42 1.10e-11 CACGCTTTCA CCGTGGAGACCGGGGTTCGACTCCC CGTATCGGAG chrXVI:210096-210402 - 3 1.10e-11 CACGCTTTCA CCGTGGAGACCGGGGTTCGACTCCC CG chrIII:82365-82661 - 9 1.10e-11 CACGCTTTCA CCGTGGAGACCGGGGTTCGACTCCC CGTATCGG chrXIII:290648-290989 + 70 1.10e-11 CACGCTTTCA CCGTGGAGACCGGGGTTCGACTCCC CGTATC chrVII:845464-845920 + 43 1.48e-11 AACGTTGCCA TCGTTGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrIV:83379-83804 + 43 1.48e-11 AACGTTGCCA TCGTTGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrX:531684-531784 + 10 1.48e-11 ACGTTGCCA TCGTTGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrXVI:860217-860588 + 63 1.48e-11 AACGTTGCCA TCGTTGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrXV:282030-282332 + 69 1.48e-11 AACGTTGCCA TCGTTGGGCCCCCGGTTCGATTCCG GGCTTGC chrVII:876253-876611 + 50 2.28e-11 TGACTCTTAA TCATAAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrVI:226567-226895 - 17 2.28e-11 TGACTCTTAA TCATAAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrIV:1201582-1201977 + 59 2.28e-11 TGACTCTTAA TCATAAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrVII:185590-185904 - 27 2.28e-11 TGACTCTTAA TCATAAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrV:435615-435983 - 13 2.28e-11 TGACTCTTAA TCATAAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrXI:162262-162707 - 63 3.02e-11 TGACTTCTAA TCAGAAGATTATGGGTTCGACCCCC ATCGTGAGTG chrVII:736145-736580 + 65 3.02e-11 TGACTTCTAA TCAGAAGATTATGGGTTCGACCCCC ATCGTGAGTG chrX:374335-374435 - 23 3.02e-11 TGACTTCTAA TCAGAAGATTATGGGTTCGACCCCC ATCGTGAGTG chrII:405735-406173 + 11 3.02e-11 TGACTTCTAA TCAGAAGATTATGGGTTCGACCCCC ATCGTGAGTG chrX:355217-355317 + 12 3.02e-11 TGACTTCTAA TCAGAAGATTATGGGTTCGACCCCC ATCGTGAGTG chrVII:405401-405683 + 15 3.02e-11 TGACTTCTAA TCAGAAGATTATGGGTTCGACCCCC ATCGTGAGTG chrXVI:819322-819813 + 51 5.89e-11 GTGCTAATAA CGCGGGGATCAGCGGTTCGATCCCG CTAGAGACCA chrXV:438497-438869 + 71 5.89e-11 AGCAAGGATA CCGAAATGTCAGGGGTTCGAGCCCC CTATG chrXII:875233-875593 + 74 5.89e-11 AGCAAGGATA CCGAAATGTCAGGGGTTCGAGCCCC CT chrIV:359438-359791 + 74 5.89e-11 AGCAAGGATA CCGAAATGTCAGGGGTTCGAGCCCC CT chrXIV:569769-569993 - 46 5.89e-11 GTGCTAATAA CGCGGGGATCAGCGGTTCGATCCCG CTAGAGACCA chrI:166158-166471 + 41 2.53e-10 TCCCTTGCAA GGAAGAGGTCATCGGTTCGATTCCG GTTGCGTCCA chrX:197184-197284 - 47 3.54e-10 CCCTTAGCAT GGGAGAGGTCTCCGGTTCGATTCCG GACTCGTCCA chrXII:656785-657153 - 25 3.54e-10 CCCTTAGCAT GGGAGAGGTCTCCGGTTCGATTCCG GACTCGTCCA chrVII:774207-774563 + 52 3.54e-10 CCCTTAGCAT GGGAGAGGTCTCCGGTTCGATTCCG GACTCGTCCA chrXII:448528-448879 - 7 4.40e-10 TCGGTTTTGA TCCGGACAACCCCGGTTCGAATCCG GGTAGG chrXI:46640-46937 - 7 4.40e-10 GCACTCGTAA TGCGGGGATCGTGGGTTCAATTCCC ACAGAG chrV:130983-131283 - 9 6.05e-10 TCGGTTTTGA TCCGAACAACCCCGGTTCGAATCCG GGTAAGAC chrX:378221-378321 + 68 9.12e-10 TGCTTAACAC GCAGAACGTCCCCAGTTCGATCCTG GGCGAAAT chrVII:823337-823669 + 68 9.12e-10 TGCTTAACAC GCAGAACGTCCCCAGTTCGATCCTG GGCGAAAT chrV:438570-438898 + 55 9.12e-10 TGCTTAACAC GCAGAACGTCCCCAGTTCGATCCTG GGCGAAATCA chrVII:779468-779847 + 46 1.11e-09 CACCCTTCCA AGGTGGGGACACGGGTTCGATTCTC GTACCGCTCA chrXVI:559984-560428 - 52 1.80e-09 GGTCAAGTTA TCTGGAGGTCCTGTGTTCGATCCAC AGAATTCGCA chrVII:440505-441001 - 23 1.80e-09 GGTCAAGTTA TCTGGAGGTCCTGTGTTCGATCCAC AGAATTCGCA chrX:538415-538515 + 72 2.17e-09 TCCCTCCTAA GGAGAAGACTGCGGGTTCGAGTCCC GTAC chrXIII:808121-808479 - 6 3.12e-09 TCGGTTCTGA TCCGAACAACCCCAGTTCGAATCCG GGTGG chrXIV:104662-105095 + 15 3.72e-09 ACACTAGTAA TGTGGAGATCATCGGTTCAAATCCG ATTGGAAGCA chrVIII:115821-116379 - 67 3.72e-09 CACTAGTAA TGTGGAGATCATCGGTTCAAATCCG ATTGGAAGCA chrIV:1256851-1257251 - 17 4.05e-09 ATGCTTCCCA AGCATGGGGCCCGGGTTCGATTCCC GGCTTCCGCA chrX:422788-422888 + 72 4.05e-09 AGTCTCATAA TCTGAAGGTCGAGAGTTCGAACCTC CCCT chrXV:976326-976648 + 22 4.05e-09 AGTCTCATAA TCTGAAGGTCGAGAGTTCGAACCTC CCCTGGAGCA chrXVI:810547-810838 + 73 4.81e-09 CGACTGTTAA TCGCAAGATCGTGAGTTCAACCCTC ACT chrIII:127554-127907 + 75 4.81e-09 CGACTGTTAA TCGCAAGATCGTGAGTTCAACCCTC A chrVII:730983-731352 + 59 4.81e-09 CGACTGTTAA TCGCAAGATCGTGAGTTCAACCCTC ACTGGGGTCG chrXIV:102565-102936 + 55 4.81e-09 CGACTGTTAA TCGCAAGATCGTGAGTTCAACCCTC ACTGGGGTCG chrXV:594244-594561 - 12 1.71e-08 ATGCTTCCCA AGCATGAGGCCCGGGTTCGATTCCC GGCTTGCGCA chrX:354120-354220 + 73 2.45e-08 CACTACGAAA TCTTGAGATCGGGCGTTCGACTCGC CCC chrXVI:435773-436121 - 6 2.82e-08 AGATTGCAAA TCTGTTGGTCCTTAGTTCGATCCTG AGTGC chrXVI:775659-775980 - 6 2.82e-08 AGATTGCAAA TCTGTTGGTCCTTAGTTCGATCCTG AGTGC chrXI:313304-313607 - 6 1.21e-07 ATCGTTGTGG CCGATGAAACCCTGGTTCGATTCTA GGAGA chrVII:878566-878963 - 6 1.21e-07 AAGATTGCAA TCGAAGGGTTGCAGGTTCAATTCCT GTCCG chrVII:319717-320003 + 8 1.21e-07 GTTGTGG CCGATGAAACCCTGGTTCGATTCTA GGAGATGGCA chrV:99961-100332 + 74 1.60e-07 GGGCTCATAA CCCTGATGTCCTCGGATCGAAACCG AG chrVII:544340-544804 - 65 2.85e-07 GCGCTTGTCG CGTGCCAGATCGGGGTTCAATTCCC CGTCGCGGAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCRKRRGRTCMBSGGTTCGAYYCCS MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:123413-123797 2.3e-14 31_[-1]_44 chrVII:541702-542101 1.1e-11 35_[+1]_40 chrVII:328453-328841 1.1e-11 22_[+1]_53 chrVII:401429-401661 1.1e-11 41_[-1]_34 chrXVI:210096-210402 1.1e-11 2_[-1]_73 chrIII:82365-82661 1.1e-11 8_[-1]_67 chrXIII:290648-290989 1.1e-11 69_[+1]_6 chrVII:845464-845920 1.5e-11 42_[+1]_33 chrIV:83379-83804 1.5e-11 42_[+1]_33 chrX:531684-531784 1.5e-11 9_[+1]_66 chrXVI:860217-860588 1.5e-11 62_[+1]_13 chrXV:282030-282332 1.5e-11 68_[+1]_7 chrVII:876253-876611 2.3e-11 49_[+1]_26 chrVI:226567-226895 2.3e-11 16_[-1]_59 chrIV:1201582-1201977 2.3e-11 58_[+1]_17 chrVII:185590-185904 2.3e-11 26_[-1]_49 chrV:435615-435983 2.3e-11 12_[-1]_63 chrXI:162262-162707 3e-11 62_[-1]_13 chrVII:736145-736580 3e-11 64_[+1]_11 chrX:374335-374435 3e-11 22_[-1]_53 chrII:405735-406173 3e-11 10_[+1]_65 chrX:355217-355317 3e-11 11_[+1]_64 chrVII:405401-405683 3e-11 14_[+1]_61 chrXVI:819322-819813 5.9e-11 50_[+1]_25 chrXV:438497-438869 5.9e-11 70_[+1]_5 chrXII:875233-875593 5.9e-11 73_[+1]_2 chrIV:359438-359791 5.9e-11 73_[+1]_2 chrXIV:569769-569993 5.9e-11 45_[-1]_30 chrI:166158-166471 2.5e-10 40_[+1]_35 chrX:197184-197284 3.5e-10 46_[-1]_29 chrXII:656785-657153 3.5e-10 24_[-1]_51 chrVII:774207-774563 3.5e-10 51_[+1]_24 chrXII:448528-448879 4.4e-10 6_[-1]_69 chrXI:46640-46937 4.4e-10 6_[-1]_69 chrV:130983-131283 6.1e-10 8_[-1]_67 chrX:378221-378321 9.1e-10 67_[+1]_8 chrVII:823337-823669 9.1e-10 67_[+1]_8 chrV:438570-438898 9.1e-10 54_[+1]_21 chrVII:779468-779847 1.1e-09 45_[+1]_30 chrXVI:559984-560428 1.8e-09 51_[-1]_24 chrVII:440505-441001 1.8e-09 22_[-1]_53 chrX:538415-538515 2.2e-09 71_[+1]_4 chrXIII:808121-808479 3.1e-09 5_[-1]_70 chrXIV:104662-105095 3.7e-09 14_[+1]_61 chrVIII:115821-116379 3.7e-09 66_[-1]_9 chrIV:1256851-1257251 4.1e-09 16_[-1]_59 chrX:422788-422888 4.1e-09 71_[+1]_4 chrXV:976326-976648 4.1e-09 21_[+1]_54 chrXVI:810547-810838 4.8e-09 72_[+1]_3 chrIII:127554-127907 4.8e-09 74_[+1]_1 chrVII:730983-731352 4.8e-09 58_[+1]_17 chrXIV:102565-102936 4.8e-09 54_[+1]_21 chrXV:594244-594561 1.7e-08 11_[-1]_64 chrX:354120-354220 2.5e-08 72_[+1]_3 chrXVI:435773-436121 2.8e-08 5_[-1]_70 chrXVI:775659-775980 2.8e-08 5_[-1]_70 chrXI:313304-313607 1.2e-07 5_[-1]_70 chrVII:878566-878963 1.2e-07 5_[-1]_70 chrVII:319717-320003 1.2e-07 7_[+1]_68 chrV:99961-100332 1.6e-07 73_[+1]_2 chrVII:544340-544804 2.9e-07 64_[-1]_11 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCRKRRGRTCMBSGGTTCGAYYCCS MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCRKRRGRTCMBSGGTTCGAYYCCS width=25 seqs=61 chrIII:123413-123797 ( 32) GCGGGAGGTCCCGGGTTCGAGTCCC 1 chrVII:541702-542101 ( 36) CCGTGGAGACCGGGGTTCGACTCCC 1 chrVII:328453-328841 ( 23) CCGTGGAGACCGGGGTTCGACTCCC 1 chrVII:401429-401661 ( 42) CCGTGGAGACCGGGGTTCGACTCCC 1 chrXVI:210096-210402 ( 3) CCGTGGAGACCGGGGTTCGACTCCC 1 chrIII:82365-82661 ( 9) CCGTGGAGACCGGGGTTCGACTCCC 1 chrXIII:290648-290989 ( 70) CCGTGGAGACCGGGGTTCGACTCCC 1 chrVII:845464-845920 ( 43) TCGTTGGGCCCCCGGTTCGATTCCG 1 chrIV:83379-83804 ( 43) TCGTTGGGCCCCCGGTTCGATTCCG 1 chrX:531684-531784 ( 10) TCGTTGGGCCCCCGGTTCGATTCCG 1 chrXVI:860217-860588 ( 63) TCGTTGGGCCCCCGGTTCGATTCCG 1 chrXV:282030-282332 ( 69) TCGTTGGGCCCCCGGTTCGATTCCG 1 chrVII:876253-876611 ( 50) TCATAAGGTTAGGGGTTCGAGCCCC 1 chrVI:226567-226895 ( 17) TCATAAGGTTAGGGGTTCGAGCCCC 1 chrIV:1201582-1201977 ( 59) TCATAAGGTTAGGGGTTCGAGCCCC 1 chrVII:185590-185904 ( 27) TCATAAGGTTAGGGGTTCGAGCCCC 1 chrV:435615-435983 ( 13) TCATAAGGTTAGGGGTTCGAGCCCC 1 chrXI:162262-162707 ( 63) TCAGAAGATTATGGGTTCGACCCCC 1 chrVII:736145-736580 ( 65) TCAGAAGATTATGGGTTCGACCCCC 1 chrX:374335-374435 ( 23) TCAGAAGATTATGGGTTCGACCCCC 1 chrII:405735-406173 ( 11) TCAGAAGATTATGGGTTCGACCCCC 1 chrX:355217-355317 ( 12) TCAGAAGATTATGGGTTCGACCCCC 1 chrVII:405401-405683 ( 15) TCAGAAGATTATGGGTTCGACCCCC 1 chrXVI:819322-819813 ( 51) CGCGGGGATCAGCGGTTCGATCCCG 1 chrXV:438497-438869 ( 71) CCGAAATGTCAGGGGTTCGAGCCCC 1 chrXII:875233-875593 ( 74) CCGAAATGTCAGGGGTTCGAGCCCC 1 chrIV:359438-359791 ( 74) CCGAAATGTCAGGGGTTCGAGCCCC 1 chrXIV:569769-569993 ( 46) CGCGGGGATCAGCGGTTCGATCCCG 1 chrI:166158-166471 ( 41) GGAAGAGGTCATCGGTTCGATTCCG 1 chrX:197184-197284 ( 47) GGGAGAGGTCTCCGGTTCGATTCCG 1 chrXII:656785-657153 ( 25) GGGAGAGGTCTCCGGTTCGATTCCG 1 chrVII:774207-774563 ( 52) GGGAGAGGTCTCCGGTTCGATTCCG 1 chrXII:448528-448879 ( 7) TCCGGACAACCCCGGTTCGAATCCG 1 chrXI:46640-46937 ( 7) TGCGGGGATCGTGGGTTCAATTCCC 1 chrV:130983-131283 ( 9) TCCGAACAACCCCGGTTCGAATCCG 1 chrX:378221-378321 ( 68) GCAGAACGTCCCCAGTTCGATCCTG 1 chrVII:823337-823669 ( 68) GCAGAACGTCCCCAGTTCGATCCTG 1 chrV:438570-438898 ( 55) GCAGAACGTCCCCAGTTCGATCCTG 1 chrVII:779468-779847 ( 46) AGGTGGGGACACGGGTTCGATTCTC 1 chrXVI:559984-560428 ( 52) TCTGGAGGTCCTGTGTTCGATCCAC 1 chrVII:440505-441001 ( 23) TCTGGAGGTCCTGTGTTCGATCCAC 1 chrX:538415-538515 ( 72) GGAGAAGACTGCGGGTTCGAGTCCC 1 chrXIII:808121-808479 ( 6) TCCGAACAACCCCAGTTCGAATCCG 1 chrXIV:104662-105095 ( 15) TGTGGAGATCATCGGTTCAAATCCG 1 chrVIII:115821-116379 ( 67) TGTGGAGATCATCGGTTCAAATCCG 1 chrIV:1256851-1257251 ( 17) AGCATGGGGCCCGGGTTCGATTCCC 1 chrX:422788-422888 ( 72) TCTGAAGGTCGAGAGTTCGAACCTC 1 chrXV:976326-976648 ( 22) TCTGAAGGTCGAGAGTTCGAACCTC 1 chrXVI:810547-810838 ( 73) TCGCAAGATCGTGAGTTCAACCCTC 1 chrIII:127554-127907 ( 75) TCGCAAGATCGTGAGTTCAACCCTC 1 chrVII:730983-731352 ( 59) TCGCAAGATCGTGAGTTCAACCCTC 1 chrXIV:102565-102936 ( 55) TCGCAAGATCGTGAGTTCAACCCTC 1 chrXV:594244-594561 ( 12) AGCATGAGGCCCGGGTTCGATTCCC 1 chrX:354120-354220 ( 73) TCTTGAGATCGGGCGTTCGACTCGC 1 chrXVI:435773-436121 ( 6) TCTGTTGGTCCTTAGTTCGATCCTG 1 chrXVI:775659-775980 ( 6) TCTGTTGGTCCTTAGTTCGATCCTG 1 chrXI:313304-313607 ( 6) CCGATGAAACCCTGGTTCGATTCTA 1 chrVII:878566-878963 ( 6) TCGAAGGGTTGCAGGTTCAATTCCT 1 chrVII:319717-320003 ( 8) CCGATGAAACCCTGGTTCGATTCTA 1 chrV:99961-100332 ( 74) CCCTGATGTCCTCGGATCGAAACCG 1 chrVII:544340-544804 ( 65) CGTGCCAGATCGGGGTTCAATTCCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCRKRRGRTCMBSGGTTCGAYYCCS MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 25 n= 40356 bayes= 10.0588 E= 9.0e-230 -266 38 -36 84 -1257 203 28 -1257 -24 -36 117 -92 -66 -153 117 0 51 -353 93 -79 100 -353 79 -324 -92 -94 183 -224 21 -1257 176 -1257 -54 -94 -253 108 -1257 203 -1257 -44 8 128 -21 -266 -324 93 64 0 -424 79 164 -224 -66 -353 199 -324 -1257 -1257 240 -1257 -424 -1257 -1257 166 -1257 -1257 -1257 169 -1257 240 -1257 -1257 -107 -1257 217 -1257 169 -1257 -1257 -1257 -124 56 -21 46 -424 133 -1257 71 -1257 240 -1257 -1257 -324 193 -353 -44 -324 164 93 -424 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCRKRRGRTCMBSGGTTCGAYYCCS MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 25 nsites= 61 E= 9.0e-230 0.049180 0.245902 0.147541 0.557377 0.000000 0.770492 0.229508 0.000000 0.262295 0.147541 0.426230 0.163934 0.196721 0.065574 0.426230 0.311475 0.442623 0.016393 0.360656 0.180328 0.622951 0.016393 0.327869 0.032787 0.163934 0.098361 0.672131 0.065574 0.360656 0.000000 0.639344 0.000000 0.213115 0.098361 0.032787 0.655738 0.000000 0.770492 0.000000 0.229508 0.327869 0.459016 0.163934 0.049180 0.032787 0.360656 0.295082 0.311475 0.016393 0.327869 0.590164 0.065574 0.196721 0.016393 0.754098 0.032787 0.000000 0.000000 1.000000 0.000000 0.016393 0.000000 0.000000 0.983607 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.147541 0.000000 0.852459 0.000000 1.000000 0.000000 0.000000 0.000000 0.131148 0.278689 0.163934 0.426230 0.016393 0.475410 0.000000 0.508197 0.000000 1.000000 0.000000 0.000000 0.032787 0.721311 0.016393 0.229508 0.032787 0.590164 0.360656 0.016393 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCRKRRGRTCMBSGGTTCGAYYCCS MEME-1 regular expression -------------------------------------------------------------------------------- [TC][CG][GA][GT][AG][AG]G[GA][TA][CT][CA][CTG][GC]GGTTCGA[TC][TC]C[CT][CG] -------------------------------------------------------------------------------- Time 270.75 secs. ******************************************************************************** ******************************************************************************** MOTIF AGSBYNNDTGGYBYAGTKGKTARMGCS MEME-2 width = 27 sites = 51 llr = 894 E-value = 3.5e-138 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGSBYNNDTGGYBYAGTKGKTARMGCS MEME-2 Description -------------------------------------------------------------------------------- Simplified A 6:1:1222:2:::1a1::::364511: pos.-specific C 2:54523::::644:::2::::13154 probability G :954:324:8a:31:9:5a5::42625 matrix T 21:34334a::434::a3:57311212 bits 2.4 * * 2.2 * * 1.9 * * * 1.7 * * * * * Relative 1.4 * *** *** * Entropy 1.2 * **** *** * (25.3 bits) 1.0 ** **** *** * 0.7 *** ***** ******* * * 0.5 ***** ****** ********* *** 0.2 ***** ******************** 0.0 --------------------------- Multilevel AGCCCTCGTGGCCTAGTGGGTAGAGCG consensus T GGTGTT TGC T TATAC GC sequence T A A T C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGSBYNNDTGGYBYAGTKGKTARMGCS MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------------- chrXII:656785-657153 - 62 5.08e-13 ACAAGAAAAT TGGGCGTGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrVII:774207-774563 + 13 5.08e-13 ATCAATTAAT TGGGCGTGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXI:517821-518116 + 69 5.08e-13 ATATCTACTA TGGGCGTGTGGCGTAGTCGGTAGCGCG CTCCC chrI:166158-166471 + 2 4.81e-12 T TGGGCACATGGCGCAGTTGGTAGCGCG CTTCCCTTGC chrVII:738945-739320 + 39 1.65e-11 CGAAAAAAAT AGGTCTCTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrVII:876253-876611 + 11 4.33e-11 ATAACAGAAT AGCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrIV:1201582-1201977 + 20 4.33e-11 ACAAATAAAT AGCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrVII:185590-185904 - 64 4.33e-11 TCAACGAAAT AGCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrV:435615-435983 - 50 4.33e-11 CAACAATAAG AGCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrIV:437623-437976 + 22 5.88e-11 ATCATTAGTA AGGCAACTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrX:523876-523976 - 46 5.88e-11 AAGAGATTAA AGGCAACTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrIV:1305513-1305839 + 3 5.88e-11 TA AGGCAACTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrXVI:819322-819813 + 11 9.15e-11 AACAATAGAA TGGTCTCTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrVI:226567-226895 - 54 2.11e-10 GAGATTAAAA TGCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrXII:167844-168210 - 23 2.75e-10 AATAGTCATA TGGCAACTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrXII:92405-92762 + 14 9.52e-10 CAAGTTAATA AGGGCGTGTGGTCTAGTGGTATGATTC TCGCTTTGGG chrXII:592407-592765 - 58 1.07e-09 CAACATACAA TGGGAGTTTGGCCGAGTGGTTTAAGGC GTCAGATTTA chrVII:845464-845920 + 6 1.20e-09 TAACA AGCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrIV:83379-83804 + 6 1.20e-09 CACTT AGCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrXVI:860217-860588 + 26 1.20e-09 GTAAATAACA AGCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrX:378221-378321 + 28 2.10e-09 ATAAATTAAT AGGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrV:438570-438898 + 15 2.10e-09 TCAACAAATT AGGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXII:784189-784566 + 26 2.34e-09 GTTGTTCAAC CGTCCCAGTGGCCGAGTGGTTAAGGCG ATGCCTGCTA chrI:139021-139365 + 8 2.60e-09 ATTAGTA CGGGCGTGTGGTCTAGTGGTATGATTC TCGCTTTGGG chrXIV:568016-568253 + 30 2.60e-09 ATAAAATAAT CGGGCGTGTGGTCTAGTGGTATGATTC TCGCTTTGGG chrXV:438497-438869 + 9 3.21e-09 AAGAACTC ATCCTTGTTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXII:875233-875593 + 12 3.21e-09 CGAAGAACTC ATCCTTGTTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrIV:359438-359791 + 12 3.21e-09 CGAAGAACTC ATCCTTGTTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrVII:115350-115684 + 20 3.21e-09 CGAAGAACTC ATCCTTGTTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXV:282030-282332 + 32 3.21e-09 AACATGAAAG CGCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrVII:730983-731352 + 19 5.34e-09 ATAGTCAAAA AGACTCCATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXIV:102565-102936 + 15 5.34e-09 ATATATTATA AGACTCCATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrVII:823337-823669 + 28 6.49e-09 CCAATAAGAG TGGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXVI:810547-810838 + 33 1.25e-08 TCATTATTTG CGACTCCATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrII:36240-36596 + 29 1.25e-08 ATCAGTTGTA AGCGGATTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXI:46640-46937 - 43 1.50e-08 AAAATTACTC AGCCCTTTTGGCCAAGTGGTAAGGCAT CGCACTCGTA chrIII:127554-127907 + 35 1.50e-08 CAAGATAAAA TGACTCCATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXV:594244-594561 - 48 1.63e-08 TTGATTGAAA CGCGCAAGTGGTTCAGTGGTTAGAATT TATGCTTCCC chrX:422788-422888 + 33 3.48e-08 ATCCTTTGTA TGCTTCAGTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrIV:1256851-1257251 - 53 3.77e-08 AGATCTTCTT AGCGAAAGTGGTTCAGTGGTTAGAATT CATGCTTCCC chrIII:123413-123797 - 68 3.77e-08 CAAAGG AGGGCGTGTGGTCTAGAGGTATGATTC TCGCTTAGGG chrVII:779468-779847 + 8 6.01e-08 TTAACCC CGGGCGGTTAGTGTAGTGGTTATCATC CCACCCTTCC chrXIII:808121-808479 - 42 8.68e-08 CAGAAGAAAA AGGTCCTATAGTGTAGTGGTTATCACT TTCGGTTCTG chrXVI:435773-436121 - 42 8.68e-08 ATACAACAAA AGCTCGTATGGCGCAGTGGTAGCGCAG CAGATTGCAA chrXVI:775659-775980 - 42 8.68e-08 ATAATTCAAA AGCTCGTATGGCGCAGTGGTAGCGCAG CAGATTGCAA chrVII:736145-736580 + 27 1.32e-07 TAATTTCAAT AGCTCGCGTGGCGTAATGGCAACGCGT CTGACTTCTA chrX:374335-374435 - 59 1.32e-07 AACAAATAGT AGCTCGCGTGGCGTAATGGCAACGCGT CTGACTTCTA chrV:130983-131283 - 45 1.41e-07 AATAATTAAG AGGTTTTATAGTGTAGTGGTTATCACT TTCGGTTTTG chrXII:448528-448879 - 43 1.62e-07 CAAGAAGTTC CGGTCCTATAGTGTAGTGGTTATCACT TTCGGTTTTG chrVIII:34487-36305 - 30 4.58e-07 CCGAAGACGA AGCTGCTTTGGCTAAGTTGGTTTCTAC CATTGACGCT chrXI:100442-100926 - 42 6.04e-07 ACCGTGAGAT AGGGTTAATGGTCTTGTGGAGTAAGCG TCCATGATGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGSBYNNDTGGYBYAGTKGKTARMGCS MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:656785-657153 5.1e-13 61_[-2]_12 chrVII:774207-774563 5.1e-13 12_[+2]_61 chrXI:517821-518116 5.1e-13 68_[+2]_5 chrI:166158-166471 4.8e-12 1_[+2]_72 chrVII:738945-739320 1.7e-11 38_[+2]_35 chrVII:876253-876611 4.3e-11 10_[+2]_63 chrIV:1201582-1201977 4.3e-11 19_[+2]_54 chrVII:185590-185904 4.3e-11 63_[-2]_10 chrV:435615-435983 4.3e-11 49_[-2]_24 chrIV:437623-437976 5.9e-11 21_[+2]_52 chrX:523876-523976 5.9e-11 45_[-2]_28 chrIV:1305513-1305839 5.9e-11 2_[+2]_71 chrXVI:819322-819813 9.1e-11 10_[+2]_63 chrVI:226567-226895 2.1e-10 53_[-2]_20 chrXII:167844-168210 2.8e-10 22_[-2]_51 chrXII:92405-92762 9.5e-10 13_[+2]_60 chrXII:592407-592765 1.1e-09 57_[-2]_16 chrVII:845464-845920 1.2e-09 5_[+2]_68 chrIV:83379-83804 1.2e-09 5_[+2]_68 chrXVI:860217-860588 1.2e-09 25_[+2]_48 chrX:378221-378321 2.1e-09 27_[+2]_46 chrV:438570-438898 2.1e-09 14_[+2]_59 chrXII:784189-784566 2.3e-09 25_[+2]_48 chrI:139021-139365 2.6e-09 7_[+2]_66 chrXIV:568016-568253 2.6e-09 29_[+2]_44 chrXV:438497-438869 3.2e-09 8_[+2]_65 chrXII:875233-875593 3.2e-09 11_[+2]_62 chrIV:359438-359791 3.2e-09 11_[+2]_62 chrVII:115350-115684 3.2e-09 19_[+2]_54 chrXV:282030-282332 3.2e-09 31_[+2]_42 chrVII:730983-731352 5.3e-09 18_[+2]_55 chrXIV:102565-102936 5.3e-09 14_[+2]_59 chrVII:823337-823669 6.5e-09 27_[+2]_46 chrXVI:810547-810838 1.3e-08 32_[+2]_41 chrII:36240-36596 1.3e-08 28_[+2]_45 chrXI:46640-46937 1.5e-08 42_[-2]_31 chrIII:127554-127907 1.5e-08 34_[+2]_39 chrXV:594244-594561 1.6e-08 47_[-2]_26 chrX:422788-422888 3.5e-08 32_[+2]_41 chrIV:1256851-1257251 3.8e-08 52_[-2]_21 chrIII:123413-123797 3.8e-08 67_[-2]_6 chrVII:779468-779847 6e-08 7_[+2]_66 chrXIII:808121-808479 8.7e-08 41_[-2]_32 chrXVI:435773-436121 8.7e-08 41_[-2]_32 chrXVI:775659-775980 8.7e-08 41_[-2]_32 chrVII:736145-736580 1.3e-07 26_[+2]_47 chrX:374335-374435 1.3e-07 58_[-2]_15 chrV:130983-131283 1.4e-07 44_[-2]_29 chrXII:448528-448879 1.6e-07 42_[-2]_31 chrVIII:34487-36305 4.6e-07 29_[-2]_44 chrXI:100442-100926 6e-07 41_[-2]_32 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGSBYNNDTGGYBYAGTKGKTARMGCS MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGSBYNNDTGGYBYAGTKGKTARMGCS width=27 seqs=51 chrXII:656785-657153 ( 62) TGGGCGTGTGGCGTAGTCGGTAGCGCG 1 chrVII:774207-774563 ( 13) TGGGCGTGTGGCGTAGTCGGTAGCGCG 1 chrXI:517821-518116 ( 69) TGGGCGTGTGGCGTAGTCGGTAGCGCG 1 chrI:166158-166471 ( 2) TGGGCACATGGCGCAGTTGGTAGCGCG 1 chrVII:738945-739320 ( 39) AGGTCTCTTGGCCCAGTTGGTTAAGGC 1 chrVII:876253-876611 ( 11) AGCCTTGTTGGCGCAATCGGTAGCGCG 1 chrIV:1201582-1201977 ( 20) AGCCTTGTTGGCGCAATCGGTAGCGCG 1 chrVII:185590-185904 ( 64) AGCCTTGTTGGCGCAATCGGTAGCGCG 1 chrV:435615-435983 ( 50) AGCCTTGTTGGCGCAATCGGTAGCGCG 1 chrIV:437623-437976 ( 22) AGGCAACTTGGCCGAGTGGTTAAGGCG 1 chrX:523876-523976 ( 46) AGGCAACTTGGCCGAGTGGTTAAGGCG 1 chrIV:1305513-1305839 ( 3) AGGCAACTTGGCCGAGTGGTTAAGGCG 1 chrXVI:819322-819813 ( 11) TGGTCTCTTGGCCCAGTTGGTTAAGGC 1 chrVI:226567-226895 ( 54) TGCCTTGTTGGCGCAATCGGTAGCGCG 1 chrXII:167844-168210 ( 23) TGGCAACTTGGCCGAGTGGTTAAGGCG 1 chrXII:92405-92762 ( 14) AGGGCGTGTGGTCTAGTGGTATGATTC 1 chrXII:592407-592765 ( 58) TGGGAGTTTGGCCGAGTGGTTTAAGGC 1 chrVII:845464-845920 ( 6) AGCGCAAGTGGTTTAGTGGTAAAATCC 1 chrIV:83379-83804 ( 6) AGCGCAAGTGGTTTAGTGGTAAAATCC 1 chrXVI:860217-860588 ( 26) AGCGCAAGTGGTTTAGTGGTAAAATCC 1 chrX:378221-378321 ( 28) AGGTTTCGTGGTCTAGTCGGTTATGGC 1 chrV:438570-438898 ( 15) AGGTTTCGTGGTCTAGTCGGTTATGGC 1 chrXII:784189-784566 ( 26) CGTCCCAGTGGCCGAGTGGTTAAGGCG 1 chrI:139021-139365 ( 8) CGGGCGTGTGGTCTAGTGGTATGATTC 1 chrXIV:568016-568253 ( 30) CGGGCGTGTGGTCTAGTGGTATGATTC 1 chrXV:438497-438869 ( 9) ATCCTTGTTAGCTCAGTTGGTAGAGCG 1 chrXII:875233-875593 ( 12) ATCCTTGTTAGCTCAGTTGGTAGAGCG 1 chrIV:359438-359791 ( 12) ATCCTTGTTAGCTCAGTTGGTAGAGCG 1 chrVII:115350-115684 ( 20) ATCCTTGTTAGCTCAGTTGGTAGAGCG 1 chrXV:282030-282332 ( 32) CGCGCAAGTGGTTTAGTGGTAAAATCC 1 chrVII:730983-731352 ( 19) AGACTCCATGGCCAAGTTGGTTAAGGC 1 chrXIV:102565-102936 ( 15) AGACTCCATGGCCAAGTTGGTTAAGGC 1 chrVII:823337-823669 ( 28) TGGTTTCGTGGTCTAGTCGGTTATGGC 1 chrXVI:810547-810838 ( 33) CGACTCCATGGCCAAGTTGGTTAAGGC 1 chrII:36240-36596 ( 29) AGCGGATTTAGCTCAGTTGGGAGAGCG 1 chrXI:46640-46937 ( 43) AGCCCTTTTGGCCAAGTGGTAAGGCAT 1 chrIII:127554-127907 ( 35) TGACTCCATGGCCAAGTTGGTTAAGGC 1 chrXV:594244-594561 ( 48) CGCGCAAGTGGTTCAGTGGTTAGAATT 1 chrX:422788-422888 ( 33) TGCTTCAGTAGCTCAGTAGGAAGAGCG 1 chrIV:1256851-1257251 ( 53) AGCGAAAGTGGTTCAGTGGTTAGAATT 1 chrIII:123413-123797 ( 68) AGGGCGTGTGGTCTAGAGGTATGATTC 1 chrVII:779468-779847 ( 8) CGGGCGGTTAGTGTAGTGGTTATCATC 1 chrXIII:808121-808479 ( 42) AGGTCCTATAGTGTAGTGGTTATCACT 1 chrXVI:435773-436121 ( 42) AGCTCGTATGGCGCAGTGGTAGCGCAG 1 chrXVI:775659-775980 ( 42) AGCTCGTATGGCGCAGTGGTAGCGCAG 1 chrVII:736145-736580 ( 27) AGCTCGCGTGGCGTAATGGCAACGCGT 1 chrX:374335-374435 ( 59) AGCTCGCGTGGCGTAATGGCAACGCGT 1 chrV:130983-131283 ( 45) AGGTTTTATAGTGTAGTGGTTATCACT 1 chrXII:448528-448879 ( 43) CGGTCCTATAGTGTAGTGGTTATCACT 1 chrVIII:34487-36305 ( 30) AGCTGCTTTGGCTAAGTTGGTTTCTAC 1 chrXI:100442-100926 ( 42) AGGGTTAATGGTCTTGTGGAGTAAGCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGSBYNNDTGGYBYAGTKGKTARMGCS MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 27 n= 39294 bayes= 10.0988 E= 3.5e-138 101 -27 -1232 -53 -1232 -1232 228 -199 -199 125 125 -398 -1232 98 90 -18 -140 131 -227 26 -40 -10 43 10 -82 73 5 1 -53 -1232 105 34 -1232 -1232 -1232 169 -66 -1232 209 -1232 -1232 -1232 240 -1232 -1232 177 -1232 18 -1232 112 82 -29 -140 90 -69 41 166 -1232 -1232 -398 -118 -1232 219 -1232 -398 -1232 -1232 166 -398 19 143 -29 -1232 -1232 240 -1232 -398 -227 137 54 -18 -1232 -227 114 106 -1232 -227 1 34 -127 119 -166 60 54 5 -240 -140 -95 168 -82 -199 154 31 -118 -1232 105 125 -99 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGSBYNNDTGGYBYAGTKGKTARMGCS MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 27 nsites= 51 E= 3.5e-138 0.627451 0.156863 0.000000 0.215686 0.000000 0.000000 0.921569 0.078431 0.078431 0.450980 0.450980 0.019608 0.000000 0.372549 0.352941 0.274510 0.117647 0.470588 0.039216 0.372549 0.235294 0.176471 0.254902 0.333333 0.176471 0.313725 0.196078 0.313725 0.215686 0.000000 0.392157 0.392157 0.000000 0.000000 0.000000 1.000000 0.196078 0.000000 0.803922 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.647059 0.000000 0.352941 0.000000 0.411765 0.333333 0.254902 0.117647 0.352941 0.117647 0.411765 0.980392 0.000000 0.000000 0.019608 0.137255 0.000000 0.862745 0.000000 0.019608 0.000000 0.000000 0.980392 0.019608 0.215686 0.509804 0.254902 0.000000 0.000000 1.000000 0.000000 0.019608 0.039216 0.490196 0.450980 0.274510 0.000000 0.039216 0.686275 0.647059 0.000000 0.039216 0.313725 0.392157 0.078431 0.431373 0.098039 0.470588 0.274510 0.196078 0.058824 0.117647 0.098039 0.607843 0.176471 0.078431 0.549020 0.235294 0.137255 0.000000 0.392157 0.450980 0.156863 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGSBYNNDTGGYBYAGTKGKTARMGCS MEME-2 regular expression -------------------------------------------------------------------------------- [AT]G[CG][CGT][CT][TGA][CT][GTA]TGG[CT][CGT][TC]AGT[GTC]G[GT][TA][AT][GA][AC]G[CG][GC] -------------------------------------------------------------------------------- Time 523.17 secs. ******************************************************************************** ******************************************************************************** MOTIF WTWTBYTTGTTTAYHTTTT MEME-3 width = 19 sites = 97 llr = 975 E-value = 8.8e-048 ******************************************************************************** -------------------------------------------------------------------------------- Motif WTWTBYTTGTTTAYHTTTT MEME-3 Description -------------------------------------------------------------------------------- Simplified A 3231111:2:::9:321:2 pos.-specific C 211234:::::::52::12 probability G 1:123:1:8:::::11211 matrix T 5655358a:aaa1437785 bits 2.4 2.2 1.9 1.7 * * Relative 1.4 ***** Entropy 1.2 ****** (14.5 bits) 1.0 ******* 0.7 ********* ** 0.5 ********* *** 0.2 ************* **** 0.0 ------------------- Multilevel TTTTGTTTGTTTACATTTT consensus AAA TC A TT sequence C C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTWTBYTTGTTTAYHTTTT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------- chrXV:516365-516601 - 25 1.72e-09 TGATTTTACA TTTCGTTTGTTTACATTTT ATAAATTGAG chrII:40543-40889 + 11 3.33e-09 TCTGTTCGCG CTTTCTTTGTTTACATTTT AGTGAAGTAT chrXVI:286203-286705 + 13 3.33e-09 TTTCAGAATT TTTCTCTTGTTTACCTTTT TTGCTGTTCT chrXII:230996-231518 + 37 5.67e-08 GTGCGTTGCC TTTCTTTTGTTTATATTTT TGTTCAAAAA chrVII:14208-14597 - 30 1.26e-07 TTTGAAACGG AAATTCTTGTTTACATTTT TCATTTTCCC chrIV:386781-387212 - 49 1.51e-07 TGACCGACGC AATTCTTTGTTTACTTTTC CTTCTACTCA chrX:703299-703399 + 53 1.51e-07 CAGGATATTT TTATGTTTGTTTATTTGTT TATTTCCTGC chrIV:995502-995951 - 53 2.17e-07 TTGATTTCAC TTTCCTTTGTTTACATATT ACCATTTTGA chrVI:199197-199657 + 31 2.58e-07 TATTTCGAGC TTTGTCTTGTTTATATTTA GTTACGTTGG chrXVI:736578-736908 + 55 2.58e-07 TATTTCAAAG GTTCCTTTGTTTATTTTTT ATTAACGCTT chrXVI:639275-639656 - 25 3.06e-07 CTCTGTTCTA TCTCTCTTGTTTACCATTT TCCGCTTTGT chrXII:734974-735310 - 45 3.06e-07 TCTGTACACC GTACCCTTGTTTATCTTTT CTGCCTTAAA chrIII:95944-96314 - 19 4.23e-07 TTGTTTACCA TTGTTTTTATTTACCTTTT TAGAATTGTT chrIII:248651-249057 + 49 6.75e-07 TTTAGTTTTT TTTCCCTTGTTTACATATG GAAACTCACC chrXII:234621-235019 + 54 9.07e-07 TTAGTTTCTG TCTTGCTTGTTTATCTTGC ACATCACATC chrX:533741-533841 - 50 9.07e-07 TTTTTACTAT TATTGTTTGTTTATTATTC GCGAGATGCC chrX:99374-99474 - 47 1.05e-06 ACACTTCTTT TTTTTTTTATTTATGTTTT GTTTAACTGA chrIV:466293-466505 + 25 1.38e-06 CCTTTGGTAA CATTCTTTGTTTACCGTTG ACCATCTTTA chrXI:260138-260622 + 26 1.59e-06 TGCTTTAGAG CTAGCCTTGTTTTCTTTTT TATGCTTCAA chrXI:439619-439940 + 20 1.59e-06 ATTCTTGGTT GTTGGCTTATTTACATTTC TCGCGAGCTG chrI:159757-160141 + 47 1.81e-06 AGACATATAA TTATGTTTATTTATATTTA GTGGGAGCAA chrXI:614511-614806 - 31 1.81e-06 GATGTTGACT TTTTGTTTGTTTACGTAGT TTGTTTCAAC chrXV:436390-436818 + 12 1.81e-06 TTAAAGATTC TCAAGCTTATTTACCTTTT ACCTCATTGG chrV:141004-141363 + 24 2.07e-06 GTGGAGGCGT AGTTTTTTGTTTATTTTTT CCCAATTTAC chrXVI:259305-259701 - 40 2.07e-06 CGGCTCGAGA ATTTCCTTGTTTATCCTTT TCCAATAGCG chrVIII:222608-222896 + 24 2.07e-06 TCGTCGAAAA ATTTCTTTGTTTTTTTTTT CCTTTATTGT chrX:79187-79287 + 65 2.35e-06 TCGTGTGCGC CTGTGTGTGTTTACTTTTC CCCAGCACTA chrXI:307009-307377 - 63 2.67e-06 CAGCAAACGC CTTTGTTTGCTTACATTTG GGAAAATCGT chrIV:435033-435331 + 52 3.41e-06 TTTAGTTGAG AAAGTTTTGTTTATTTTTC AGTTATTAAT chrXII:911614-911852 + 47 3.41e-06 TAAGTTGGGA TAATACATGTTTACATTTT CCATGTTATA chrXIII:669721-669957 + 43 3.41e-06 GTTGAGGGGG AATTCCTTGTTTATAGTTA TGATACGTCT chrXIV:493623-493998 + 61 3.41e-06 CAGTGTTTTA ATATGTTTATTTATCTGTT ATTGATATTA chrXIII:501793-502162 + 52 3.85e-06 TATTTTGAAG ACTTCATTGTTTACATTTA CTTTTGACGC chrXIII:424732-424899 + 30 3.85e-06 ATATATGAAA TCATGTTTATTTACGTGTT AGATGTTCCG chrVII:1020998-1021212 - 75 3.85e-06 TAATTAT AATGCCTTGTTTATTTGTG GTACTGATGA chrXVI:121132-121559 + 48 3.85e-06 TTGGCACGTT TTCTTCTTGTTTACACTTT TTTTCGAATA chrIV:1078135-1078303 + 51 3.85e-06 TAACGAGTCA ATAAGCTTGTTTATCTGTC TTGTTTTAAG chrII:122017-122379 - 43 4.34e-06 ATTTATTGAC ATTTCTTTGTTTACAATGA TCAGAGAAGA chrXVI:289172-289544 - 31 4.87e-06 TGAGCCTATT TTACCCTTGTTTATGTTCA CTTTCTCAAT chrXIV:88915-89771 + 17 4.87e-06 TCTGATCCAT TTTCCTTTATTTTCTTTTT TTTTTTTTTC chrXIII:670804-671288 - 71 5.46e-06 AACTCAGAGA TTTTCATTGTTTACCTATG GCAATGTTCA chrIII:142113-142472 - 70 5.46e-06 TGTATTACTA CTGAGCTTGTTTATCTGTA TACTTTTTTC chrXII:373025-373540 + 15 6.11e-06 GTTTGTCTGT CTTATATTGTTTACATTTC AAGTCTAATT chrIII:262696-263116 + 48 6.11e-06 TTCCTGGTTT ATTTATTTGTTTATGTTGT TCTTATATAC chrXV:277534-277954 - 26 6.83e-06 GTTCTTGACA CTGTGGTTGTTTATCTTTT GTTATTAAAG chrXV:908132-908451 + 67 6.83e-06 ATAAGCGGGC TAAACTTTGTTTATGTTTA GGTTAACGAT chrVIII:498752-499055 + 49 6.83e-06 ATGTTGTTGC CACTTCTTGTTTACAATTG TATTCTCTTG chrIV:333751-334235 + 38 6.83e-06 AACTCTTTTT TTAAGTTTGTTTTTATTTT AGTTTGACAC chrXII:921400-921832 + 69 6.83e-06 TCGACCGCCT TTTAGCTTGTTTACTGTGG CAAGGGAGAA chrX:99165-99265 + 64 7.62e-06 TTATCTGCCA TTGCCTTTGTTTACGAGTA TATCGTTAAT chrXIII:286665-287034 + 48 7.62e-06 GTGCGGCATA TTTTTCTTATTTAGTTTTT GTAGGCGGCA chrII:161613-161756 - 16 7.62e-06 CTAGAGCTGT AATTGCATGTTTATTGTTT ATTTGTTTAT chrXIII:222647-222941 + 81 1.16e-05 TATATTATAT CTTTTTTTGCTTATATGTT A chrXII:903438-903811 - 44 1.16e-05 TCTATTTATC ATCCCTTTGTTTATAAGTT CGAGAGTGTT chrXII:131854-132338 - 60 1.16e-05 TCTCGGTTTC TTCTTCTTGTTTACTATCA ATATGGGCCA chrXIV:715934-716645 + 57 1.16e-05 TTGGTTACAA CATGGCTTGTTTTCTTGTC CTTAACAATC chrXIV:414196-414511 - 10 1.28e-05 GAGATAAATC TCTGATTTGTTGACTTTTT GGAACACCA chrXVI:109945-110278 - 24 1.28e-05 GATCAACATC CAAAACTTGTTTACAGTTT TCAATCAACT chrVII:313008-313325 - 45 1.28e-05 CTTCAGAAGG GAAACCTTGTTTATAATTT GGTTTACTTG chrXII:833620-833962 - 42 1.42e-05 TGGATCATTT TTCGCAATGTTTACCTTTT TCGGAGGAAA chrIX:264121-264242 - 11 1.42e-05 CAGCTGCTAA AGAAGCTTGTTTACCTTCT TTACCCACAA chrXV:977973-978223 + 58 1.42e-05 AGTGTGTTAT TTGTCTTTATTTTTATTTT TGCACTAAAA chrX:540359-540459 + 31 1.56e-05 TTTTTCAGAG CAATACGTGTTTATTTTTT CACAACTTCG chrXII:150284-150768 + 48 1.72e-05 TTACCAGCGA ATGCTCTTATTTATCTTCT GCGCCTTTCC chrX:408995-409095 + 20 1.72e-05 CCGCTATTGA AAGTGCATGTTTACTATTA AGGGTTGATG chrXIII:556537-556746 - 36 1.90e-05 TCATTATTTC TTTTGCATGTTTAGTATTT AGACTAAATT chrXIII:379199-379563 + 80 1.90e-05 ACCGCTTCAA CTTTTATTGTTTATCTTGA CA chrIV:716545-716897 + 43 1.90e-05 TTGTTTTGAT TTCCTCTTGTTGACAATTT GCAGTATTTA chrIV:453765-454068 + 63 1.90e-05 GGTAATATTC TCTGTCTTATTTACCATCT TTATGTTTCC chrIV:323950-324434 - 62 2.28e-05 GCAAATTTCC GTACACTTGTTTATTGTTC CCTGTGTTCT chrXV:908619-908899 - 27 2.28e-05 GGTCCGCTAG CTAGGTCTGTTTACTTTCC GCAGCGTAAG chrX:159766-159866 + 26 2.28e-05 CGATCATTTA ATACGTTTATTTACTGTCT TATGAATGTA chrX:652021-652121 + 18 2.28e-05 TAACCAAGCT ATTGCTTTGTTGACCATTG GTGCCAGAGA chrXVI:696861-697205 - 52 2.50e-05 CAAATATCAA TAAATTCTGTTTACATTTC CGCACTATAG chrVII:316865-317286 + 32 2.50e-05 CGGAAATTTT TCTCATATATTTACTTTTT ATAGGAGAGT chrXI:101563-101895 - 43 2.50e-05 CAAATGAGAG TTAGTCTTATTTACATAGT CTTGAACTTG chrIV:870751-871078 + 54 2.74e-05 TCTTTGCGCT TACTGCCTGTTTACTTTGC TTTGCCTTCT chrV:207287-207605 + 26 2.74e-05 GATTCTAGGA GATGGCATATTTATTTTTT ATATTCTTAA chrXII:867870-868354 + 46 2.99e-05 TTGATTGACT TGGTATTTGTTTACTTTGC TACCTATACA chrII:45645-46034 + 6 2.99e-05 CAAGC TCGTATTTGTTTACTGGTA CACCTAGAGT chrIX:77839-78009 - 24 2.99e-05 CCATTTTTGG TGTTGTTTGTTTATTTTAG GAAATATTAG chrVII:364863-365929 - 61 3.26e-05 GCTGTATGTT AAACTTTTGCTTACATTTA TATTTTATGC chrIV:449737-449919 + 12 3.26e-05 TGAAATAATT TATTTATTGTTTATGATTA CCGAAACATA chrXI:436808-437292 + 10 3.26e-05 AATGCTCTT CCTGCTTTGTTTATTATAT GTGTATGAAA chrXIV:107133-107374 - 51 3.55e-05 TTTTGTGGGA ATGTGTTTGTTTACGGACT GTTTCGACAT chrXIII:272941-273143 + 11 3.87e-05 CCTTCGAAGA GTTTGTTTATTTACTATAT TTTATGCTCT chrX:191451-191551 + 54 4.20e-05 AAACTTTACA GAGGCTTTGTTTATATATA GAAAGACCAC chrXI:109626-109946 + 18 4.56e-05 TAAGGATTAC CATTACGTGTTTATGATTT TGTTAAAAAA chrX:417148-417248 + 40 5.36e-05 TCGTCCTACT CTAGTATTATTTACCTATT CATTACCACT chrV:546473-546696 + 71 5.80e-05 TACTGTTTTG ACGTGTATGTTTATTTATC TCTCTTCTGA chrXIV:7253-7529 - 70 5.80e-05 TGATACGCAA TTGAGTGTGTTTATGTATT ATGGTTGAAG chrXIII:880468-880634 - 43 6.77e-05 CGTTTGAAAG TTATTCGTGTTTTCATGTG TACAGTAACT chrXV:725311-725667 + 67 8.45e-05 TAGTTTACTT ACATTCATATTTACATGTG CGTTACTACT chrVIII:119709-120028 - 58 9.76e-05 GTATGGTTTC ACTTCTTTATTTATAAATA TTTATACTAC chrXV:832263-832764 + 64 1.05e-04 TATCTTTCAT TCATTTATATTTATCTGTA GCAATAGCTT chrXIV:452084-452302 + 35 1.05e-04 TCCCTCTCGC TATGTTCTGTTTACCATAT TGACAGTACT chrV:66937-67192 - 63 1.77e-04 ATACAAATAT ATATATATATTTATATGTA TGCGTAAGAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTWTBYTTGTTTAYHTTTT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXV:516365-516601 1.7e-09 24_[-3]_57 chrII:40543-40889 3.3e-09 10_[+3]_71 chrXVI:286203-286705 3.3e-09 12_[+3]_69 chrXII:230996-231518 5.7e-08 36_[+3]_45 chrVII:14208-14597 1.3e-07 29_[-3]_52 chrIV:386781-387212 1.5e-07 48_[-3]_33 chrX:703299-703399 1.5e-07 52_[+3]_29 chrIV:995502-995951 2.2e-07 52_[-3]_29 chrVI:199197-199657 2.6e-07 30_[+3]_51 chrXVI:736578-736908 2.6e-07 54_[+3]_27 chrXVI:639275-639656 3.1e-07 24_[-3]_57 chrXII:734974-735310 3.1e-07 44_[-3]_37 chrIII:95944-96314 4.2e-07 18_[-3]_63 chrIII:248651-249057 6.8e-07 48_[+3]_33 chrXII:234621-235019 9.1e-07 53_[+3]_28 chrX:533741-533841 9.1e-07 49_[-3]_32 chrX:99374-99474 1e-06 46_[-3]_35 chrIV:466293-466505 1.4e-06 24_[+3]_57 chrXI:260138-260622 1.6e-06 25_[+3]_56 chrXI:439619-439940 1.6e-06 19_[+3]_62 chrI:159757-160141 1.8e-06 46_[+3]_35 chrXI:614511-614806 1.8e-06 30_[-3]_51 chrXV:436390-436818 1.8e-06 11_[+3]_70 chrV:141004-141363 2.1e-06 23_[+3]_58 chrXVI:259305-259701 2.1e-06 39_[-3]_42 chrVIII:222608-222896 2.1e-06 23_[+3]_58 chrX:79187-79287 2.3e-06 64_[+3]_17 chrXI:307009-307377 2.7e-06 62_[-3]_19 chrIV:435033-435331 3.4e-06 51_[+3]_30 chrXII:911614-911852 3.4e-06 46_[+3]_35 chrXIII:669721-669957 3.4e-06 42_[+3]_39 chrXIV:493623-493998 3.4e-06 60_[+3]_21 chrXIII:501793-502162 3.9e-06 51_[+3]_30 chrXIII:424732-424899 3.9e-06 29_[+3]_52 chrVII:1020998-1021212 3.9e-06 74_[-3]_7 chrXVI:121132-121559 3.9e-06 47_[+3]_34 chrIV:1078135-1078303 3.9e-06 50_[+3]_31 chrII:122017-122379 4.3e-06 42_[-3]_39 chrXVI:289172-289544 4.9e-06 30_[-3]_51 chrXIV:88915-89771 4.9e-06 16_[+3]_65 chrXIII:670804-671288 5.5e-06 70_[-3]_11 chrIII:142113-142472 5.5e-06 69_[-3]_12 chrXII:373025-373540 6.1e-06 14_[+3]_67 chrIII:262696-263116 6.1e-06 47_[+3]_34 chrXV:277534-277954 6.8e-06 25_[-3]_56 chrXV:908132-908451 6.8e-06 66_[+3]_15 chrVIII:498752-499055 6.8e-06 48_[+3]_33 chrIV:333751-334235 6.8e-06 37_[+3]_44 chrXII:921400-921832 6.8e-06 68_[+3]_13 chrX:99165-99265 7.6e-06 63_[+3]_18 chrXIII:286665-287034 7.6e-06 47_[+3]_34 chrII:161613-161756 7.6e-06 15_[-3]_66 chrXIII:222647-222941 1.2e-05 80_[+3]_1 chrXII:903438-903811 1.2e-05 43_[-3]_38 chrXII:131854-132338 1.2e-05 59_[-3]_22 chrXIV:715934-716645 1.2e-05 56_[+3]_25 chrXIV:414196-414511 1.3e-05 9_[-3]_72 chrXVI:109945-110278 1.3e-05 23_[-3]_58 chrVII:313008-313325 1.3e-05 44_[-3]_37 chrXII:833620-833962 1.4e-05 41_[-3]_40 chrIX:264121-264242 1.4e-05 10_[-3]_71 chrXV:977973-978223 1.4e-05 57_[+3]_24 chrX:540359-540459 1.6e-05 30_[+3]_51 chrXII:150284-150768 1.7e-05 47_[+3]_34 chrX:408995-409095 1.7e-05 19_[+3]_62 chrXIII:556537-556746 1.9e-05 35_[-3]_46 chrXIII:379199-379563 1.9e-05 79_[+3]_2 chrIV:716545-716897 1.9e-05 42_[+3]_39 chrIV:453765-454068 1.9e-05 62_[+3]_19 chrIV:323950-324434 2.3e-05 61_[-3]_20 chrXV:908619-908899 2.3e-05 26_[-3]_55 chrX:159766-159866 2.3e-05 25_[+3]_56 chrX:652021-652121 2.3e-05 17_[+3]_64 chrXVI:696861-697205 2.5e-05 51_[-3]_30 chrVII:316865-317286 2.5e-05 31_[+3]_50 chrXI:101563-101895 2.5e-05 42_[-3]_39 chrIV:870751-871078 2.7e-05 53_[+3]_28 chrV:207287-207605 2.7e-05 25_[+3]_56 chrXII:867870-868354 3e-05 45_[+3]_36 chrII:45645-46034 3e-05 5_[+3]_76 chrIX:77839-78009 3e-05 23_[-3]_58 chrVII:364863-365929 3.3e-05 60_[-3]_21 chrIV:449737-449919 3.3e-05 11_[+3]_70 chrXI:436808-437292 3.3e-05 9_[+3]_72 chrXIV:107133-107374 3.6e-05 50_[-3]_31 chrXIII:272941-273143 3.9e-05 10_[+3]_71 chrX:191451-191551 4.2e-05 53_[+3]_28 chrXI:109626-109946 4.6e-05 17_[+3]_64 chrX:417148-417248 5.4e-05 39_[+3]_42 chrV:546473-546696 5.8e-05 70_[+3]_11 chrXIV:7253-7529 5.8e-05 69_[-3]_12 chrXIII:880468-880634 6.8e-05 42_[-3]_39 chrXV:725311-725667 8.5e-05 66_[+3]_15 chrVIII:119709-120028 9.8e-05 57_[-3]_24 chrXV:832263-832764 0.0001 63_[+3]_18 chrXIV:452084-452302 0.0001 34_[+3]_47 chrV:66937-67192 0.00018 62_[-3]_19 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTWTBYTTGTTTAYHTTTT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WTWTBYTTGTTTAYHTTTT width=19 seqs=97 chrXV:516365-516601 ( 25) TTTCGTTTGTTTACATTTT 1 chrII:40543-40889 ( 11) CTTTCTTTGTTTACATTTT 1 chrXVI:286203-286705 ( 13) TTTCTCTTGTTTACCTTTT 1 chrXII:230996-231518 ( 37) TTTCTTTTGTTTATATTTT 1 chrVII:14208-14597 ( 30) AAATTCTTGTTTACATTTT 1 chrIV:386781-387212 ( 49) AATTCTTTGTTTACTTTTC 1 chrX:703299-703399 ( 53) TTATGTTTGTTTATTTGTT 1 chrIV:995502-995951 ( 53) TTTCCTTTGTTTACATATT 1 chrVI:199197-199657 ( 31) TTTGTCTTGTTTATATTTA 1 chrXVI:736578-736908 ( 55) GTTCCTTTGTTTATTTTTT 1 chrXVI:639275-639656 ( 25) TCTCTCTTGTTTACCATTT 1 chrXII:734974-735310 ( 45) GTACCCTTGTTTATCTTTT 1 chrIII:95944-96314 ( 19) TTGTTTTTATTTACCTTTT 1 chrIII:248651-249057 ( 49) TTTCCCTTGTTTACATATG 1 chrXII:234621-235019 ( 54) TCTTGCTTGTTTATCTTGC 1 chrX:533741-533841 ( 50) TATTGTTTGTTTATTATTC 1 chrX:99374-99474 ( 47) TTTTTTTTATTTATGTTTT 1 chrIV:466293-466505 ( 25) CATTCTTTGTTTACCGTTG 1 chrXI:260138-260622 ( 26) CTAGCCTTGTTTTCTTTTT 1 chrXI:439619-439940 ( 20) GTTGGCTTATTTACATTTC 1 chrI:159757-160141 ( 47) TTATGTTTATTTATATTTA 1 chrXI:614511-614806 ( 31) TTTTGTTTGTTTACGTAGT 1 chrXV:436390-436818 ( 12) TCAAGCTTATTTACCTTTT 1 chrV:141004-141363 ( 24) AGTTTTTTGTTTATTTTTT 1 chrXVI:259305-259701 ( 40) ATTTCCTTGTTTATCCTTT 1 chrVIII:222608-222896 ( 24) ATTTCTTTGTTTTTTTTTT 1 chrX:79187-79287 ( 65) CTGTGTGTGTTTACTTTTC 1 chrXI:307009-307377 ( 63) CTTTGTTTGCTTACATTTG 1 chrIV:435033-435331 ( 52) AAAGTTTTGTTTATTTTTC 1 chrXII:911614-911852 ( 47) TAATACATGTTTACATTTT 1 chrXIII:669721-669957 ( 43) AATTCCTTGTTTATAGTTA 1 chrXIV:493623-493998 ( 61) ATATGTTTATTTATCTGTT 1 chrXIII:501793-502162 ( 52) ACTTCATTGTTTACATTTA 1 chrXIII:424732-424899 ( 30) TCATGTTTATTTACGTGTT 1 chrVII:1020998-1021212 ( 75) AATGCCTTGTTTATTTGTG 1 chrXVI:121132-121559 ( 48) TTCTTCTTGTTTACACTTT 1 chrIV:1078135-1078303 ( 51) ATAAGCTTGTTTATCTGTC 1 chrII:122017-122379 ( 43) ATTTCTTTGTTTACAATGA 1 chrXVI:289172-289544 ( 31) TTACCCTTGTTTATGTTCA 1 chrXIV:88915-89771 ( 17) TTTCCTTTATTTTCTTTTT 1 chrXIII:670804-671288 ( 71) TTTTCATTGTTTACCTATG 1 chrIII:142113-142472 ( 70) CTGAGCTTGTTTATCTGTA 1 chrXII:373025-373540 ( 15) CTTATATTGTTTACATTTC 1 chrIII:262696-263116 ( 48) ATTTATTTGTTTATGTTGT 1 chrXV:277534-277954 ( 26) CTGTGGTTGTTTATCTTTT 1 chrXV:908132-908451 ( 67) TAAACTTTGTTTATGTTTA 1 chrVIII:498752-499055 ( 49) CACTTCTTGTTTACAATTG 1 chrIV:333751-334235 ( 38) TTAAGTTTGTTTTTATTTT 1 chrXII:921400-921832 ( 69) TTTAGCTTGTTTACTGTGG 1 chrX:99165-99265 ( 64) TTGCCTTTGTTTACGAGTA 1 chrXIII:286665-287034 ( 48) TTTTTCTTATTTAGTTTTT 1 chrII:161613-161756 ( 16) AATTGCATGTTTATTGTTT 1 chrXIII:222647-222941 ( 81) CTTTTTTTGCTTATATGTT 1 chrXII:903438-903811 ( 44) ATCCCTTTGTTTATAAGTT 1 chrXII:131854-132338 ( 60) TTCTTCTTGTTTACTATCA 1 chrXIV:715934-716645 ( 57) CATGGCTTGTTTTCTTGTC 1 chrXIV:414196-414511 ( 10) TCTGATTTGTTGACTTTTT 1 chrXVI:109945-110278 ( 24) CAAAACTTGTTTACAGTTT 1 chrVII:313008-313325 ( 45) GAAACCTTGTTTATAATTT 1 chrXII:833620-833962 ( 42) TTCGCAATGTTTACCTTTT 1 chrIX:264121-264242 ( 11) AGAAGCTTGTTTACCTTCT 1 chrXV:977973-978223 ( 58) TTGTCTTTATTTTTATTTT 1 chrX:540359-540459 ( 31) CAATACGTGTTTATTTTTT 1 chrXII:150284-150768 ( 48) ATGCTCTTATTTATCTTCT 1 chrX:408995-409095 ( 20) AAGTGCATGTTTACTATTA 1 chrXIII:556537-556746 ( 36) TTTTGCATGTTTAGTATTT 1 chrXIII:379199-379563 ( 80) CTTTTATTGTTTATCTTGA 1 chrIV:716545-716897 ( 43) TTCCTCTTGTTGACAATTT 1 chrIV:453765-454068 ( 63) TCTGTCTTATTTACCATCT 1 chrIV:323950-324434 ( 62) GTACACTTGTTTATTGTTC 1 chrXV:908619-908899 ( 27) CTAGGTCTGTTTACTTTCC 1 chrX:159766-159866 ( 26) ATACGTTTATTTACTGTCT 1 chrX:652021-652121 ( 18) ATTGCTTTGTTGACCATTG 1 chrXVI:696861-697205 ( 52) TAAATTCTGTTTACATTTC 1 chrVII:316865-317286 ( 32) TCTCATATATTTACTTTTT 1 chrXI:101563-101895 ( 43) TTAGTCTTATTTACATAGT 1 chrIV:870751-871078 ( 54) TACTGCCTGTTTACTTTGC 1 chrV:207287-207605 ( 26) GATGGCATATTTATTTTTT 1 chrXII:867870-868354 ( 46) TGGTATTTGTTTACTTTGC 1 chrII:45645-46034 ( 6) TCGTATTTGTTTACTGGTA 1 chrIX:77839-78009 ( 24) TGTTGTTTGTTTATTTTAG 1 chrVII:364863-365929 ( 61) AAACTTTTGCTTACATTTA 1 chrIV:449737-449919 ( 12) TATTTATTGTTTATGATTA 1 chrXI:436808-437292 ( 10) CCTGCTTTGTTTATTATAT 1 chrXIV:107133-107374 ( 51) ATGTGTTTGTTTACGGACT 1 chrXIII:272941-273143 ( 11) GTTTGTTTATTTACTATAT 1 chrX:191451-191551 ( 54) GAGGCTTTGTTTATATATA 1 chrXI:109626-109946 ( 18) CATTACGTGTTTATGATTT 1 chrX:417148-417248 ( 40) CTAGTATTATTTACCTATT 1 chrV:546473-546696 ( 71) ACGTGTATGTTTATTTATC 1 chrXIV:7253-7529 ( 70) TTGAGTGTGTTTATGTATT 1 chrXIII:880468-880634 ( 43) TTATTCGTGTTTTCATGTG 1 chrXV:725311-725667 ( 67) ACATTCATATTTACATGTG 1 chrVIII:119709-120028 ( 58) ACTTCTTTATTTATAAATA 1 chrXV:832263-832764 ( 64) TCATTTATATTTATCTGTA 1 chrXIV:452084-452302 ( 35) TATGTTCTGTTTACCATAT 1 chrV:66937-67192 ( 63) ATATATATATTTATATGTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTWTBYTTGTTTAYHTTTT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 19 n= 43542 bayes= 9.91678 E= 8.8e-048 -21 -3 -120 58 -33 -39 -220 87 -6 -139 -39 64 -133 -3 -11 73 -145 56 76 -11 -211 112 -420 70 -145 -220 -188 135 -1324 -1324 -1324 169 -45 -1324 203 -1324 -1324 -261 -1324 164 -1324 -1324 -1324 169 -1324 -1324 -261 164 158 -1324 -1324 -211 -1324 150 -320 51 9 26 -74 9 -67 -320 -103 115 -145 -1324 -29 124 -291 -120 -103 133 -67 -29 -74 79 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTWTBYTTGTTTAYHTTTT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 19 nsites= 97 E= 8.8e-048 0.268041 0.185567 0.082474 0.463918 0.247423 0.144330 0.041237 0.567010 0.298969 0.072165 0.144330 0.484536 0.123711 0.185567 0.175258 0.515464 0.113402 0.278351 0.319588 0.288660 0.072165 0.412371 0.010309 0.505155 0.113402 0.041237 0.051546 0.793814 0.000000 0.000000 0.000000 1.000000 0.226804 0.000000 0.773196 0.000000 0.000000 0.030928 0.000000 0.969072 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.030928 0.969072 0.927835 0.000000 0.000000 0.072165 0.000000 0.536082 0.020619 0.443299 0.329897 0.226804 0.113402 0.329897 0.195876 0.020619 0.092784 0.690722 0.113402 0.000000 0.154639 0.731959 0.041237 0.082474 0.092784 0.783505 0.195876 0.154639 0.113402 0.536082 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTWTBYTTGTTTAYHTTTT MEME-3 regular expression -------------------------------------------------------------------------------- [TA][TA][TA]T[GTC][TC]TT[GA]TTTA[CT][ATC]TTTT -------------------------------------------------------------------------------- Time 768.30 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:921400-921832 4.61e-03 68_[+3(6.83e-06)]_13 chrIV:340252-340553 4.06e-01 100 chrIV:333751-334235 2.76e-02 37_[+3(6.83e-06)]_44 chrV:438570-438898 1.78e-11 14_[+2(2.10e-09)]_13_[+1(9.12e-10)]_\ 21 chrII:548566-548758 3.35e-02 100 chrXVI:286203-286705 1.92e-05 12_[+3(3.33e-09)]_20_[+3(4.20e-05)]_\ 30 chrXIV:102565-102936 8.47e-11 14_[+2(5.34e-09)]_13_[+1(4.81e-09)]_\ 21 chrX:139152-139252 5.17e-01 100 chrIV:1236486-1237734 1.91e-01 100 chrX:354120-354220 2.78e-06 17_[+2(2.80e-05)]_28_[+1(2.45e-08)]_\ 3 chrVII:319717-320003 8.40e-04 7_[+1(1.21e-07)]_68 chrIV:1078135-1078303 2.70e-03 50_[+3(3.85e-06)]_31 chrI:141617-141958 4.72e-01 100 chrXV:1028725-1029097 1.82e-01 100 chrXIII:667627-668111 4.80e-01 100 chrVII:730983-731352 1.82e-10 18_[+2(5.34e-09)]_13_[+1(4.81e-09)]_\ 17 chrVIII:512069-512193 8.97e-01 100 chrXII:92405-92762 8.14e-07 13_[+2(9.52e-10)]_60 chrVIII:119709-120028 2.79e-02 57_[-3(9.76e-05)]_24 chrV:435615-435983 1.72e-15 12_[-1(2.28e-11)]_12_[-2(4.33e-11)]_\ 24 chrXII:636753-640162 2.46e-01 100 chrXII:232066-234356 5.73e-02 100 chrXVI:121132-121559 1.43e-02 47_[+3(3.85e-06)]_34 chrIX:77839-78009 3.66e-02 23_[-3(2.99e-05)]_58 chrVIII:381430-382259 1.30e-01 100 chrIV:1305513-1305839 1.69e-08 2_[+2(5.88e-11)]_71 chrII:613275-613759 8.69e-01 100 chrXI:101563-101895 4.52e-02 42_[-3(2.50e-05)]_12_[-3(7.29e-05)]_\ 8 chrX:408995-409095 3.18e-02 19_[+3(1.72e-05)]_23_[-3(7.86e-05)]_\ 20 chrXV:819978-820462 4.23e-01 100 chrXI:42820-43304 3.25e-01 100 chrIV:1150712-1151071 1.06e-02 66_[-2(4.05e-05)]_7 chrVI:82592-84350 4.00e-01 100 chrVII:14208-14597 7.48e-04 29_[-3(1.26e-07)]_52 chrII:122017-122379 1.61e-02 42_[-3(4.34e-06)]_39 chrXII:446647-447131 1.66e-01 100 chrIII:127554-127907 6.36e-10 34_[+2(1.50e-08)]_13_[+1(4.81e-09)]_\ 1 chrVII:610646-610996 9.30e-01 100 chrVII:405401-405683 5.12e-08 14_[+1(3.02e-11)]_61 chrXII:348058-348694 7.92e-01 100 chrXIII:220332-220592 4.01e-01 100 chrXII:263382-264026 1.14e-01 100 chrXV:282030-282332 4.49e-13 31_[+2(3.21e-09)]_10_[+1(1.48e-11)]_\ 7 chrII:256213-256955 5.18e-01 100 chrXIII:753124-753453 5.90e-01 100 chrII:161613-161756 3.50e-03 15_[-3(7.62e-06)]_66 chrXIII:499114-500633 6.85e-01 100 chrII:235087-235470 8.79e-01 100 chrVIII:498752-499055 8.57e-04 48_[+3(6.83e-06)]_33 chrIV:953263-953747 9.00e-02 100 chrXIV:493623-493998 1.33e-02 60_[+3(3.41e-06)]_21 chrX:355217-355317 5.84e-09 11_[+1(3.02e-11)]_19_[+2(8.17e-05)]_\ 18 chrXI:617778-617992 9.20e-01 100 chrXV:725311-725667 1.38e-01 66_[+3(8.45e-05)]_15 chrXVI:376867-377351 6.80e-01 100 chrXI:284072-284772 6.17e-01 100 chrIV:453765-454068 5.68e-02 62_[+3(1.90e-05)]_19 chrXII:282772-283886 3.71e-01 100 chrVII:1020998-1021212 9.09e-03 74_[-3(3.85e-06)]_7 chrXIII:123413-123796 7.56e-02 100 chrXII:855826-857431 2.45e-01 100 chrIX:25035-25258 5.88e-01 100 chrI:70611-71023 2.17e-01 100 chrXVI:860217-860588 6.49e-14 25_[+2(1.20e-09)]_10_[+1(1.48e-11)]_\ 13 chrX:533741-533841 6.07e-03 8_[+3(7.29e-05)]_22_[-3(9.07e-07)]_\ 32 chrXIV:283158-283642 3.20e-01 100 chrIX:255294-255484 1.85e-01 100 chrXIV:63998-64242 8.16e-01 100 chrXII:930843-931156 2.64e-01 100 chrI:142253-143539 8.67e-01 100 chrII:680310-681968 6.44e-01 100 chrXIV:569769-569993 7.05e-07 45_[-1(5.89e-11)]_30 chrXI:307822-308371 8.43e-01 100 chrIII:262696-263116 1.82e-02 47_[+3(6.11e-06)]_34 chrIX:258638-258841 1.77e-01 100 chrVII:440505-441001 2.13e-05 22_[-1(1.80e-09)]_53 chrXVI:641028-641769 1.80e-01 100 chrX:745060-745160 6.97e-01 100 chrXIII:118452-118936 2.51e-01 100 chrVII:544340-544804 5.81e-04 64_[-1(2.85e-07)]_11 chrVII:442464-442948 7.63e-01 100 chrXIII:296918-298857 9.00e-01 100 chrXII:898740-899717 3.25e-01 100 chrV:67555-68706 7.85e-01 100 chrXII:234621-235019 2.99e-03 53_[+3(9.07e-07)]_28 chrXVI:199818-200302 9.47e-02 100 chrXIV:415575-416103 7.90e-02 100 chrVII:185590-185904 1.52e-14 26_[-1(2.28e-11)]_12_[-2(4.33e-11)]_\ 10 chrXIV:661237-661721 9.06e-01 100 chrXIII:253327-253581 5.56e-01 100 chrXIV:416831-417315 5.73e-01 100 chrXI:517821-518116 3.71e-09 68_[+2(5.08e-13)]_5 chrXVI:432799-434254 6.69e-01 100 chrXII:710394-710905 2.70e-02 100 chrXIII:761713-762233 2.57e-01 100 chrXII:797014-797512 8.30e-08 1_[+1(1.10e-11)]_74 chrVIII:148100-148442 5.26e-01 100 chrVI:148088-148247 6.75e-01 100 chrVII:479243-482969 9.39e-01 100 chrXV:436390-436818 2.98e-03 11_[+3(1.81e-06)]_70 chrX:652021-652121 4.45e-02 17_[+3(2.28e-05)]_64 chrXV:738734-738910 6.41e-01 100 chrVII:1057340-1057824 7.25e-01 100 chrV:61039-62119 4.84e-01 100 chrIII:227802-228409 9.70e-01 100 chrXII:734974-735310 2.37e-03 44_[-3(3.06e-07)]_37 chrVII:313008-313325 2.62e-02 44_[-3(1.28e-05)]_37 chrXII:784189-784566 4.89e-06 25_[+2(2.34e-09)]_48 chrXIV:661439-661923 9.97e-02 100 chrXIII:730461-730945 1.64e-01 100 chrXIII:163633-164052 3.78e-01 100 chrVII:738945-739320 4.93e-07 38_[+2(1.65e-11)]_35 chrVII:94689-95173 2.29e-01 100 chrXI:46640-46937 6.87e-11 6_[-1(4.40e-10)]_11_[-2(1.50e-08)]_\ 31 chrXIII:164054-164193 8.73e-01 100 chrVIII:115821-116379 5.33e-05 66_[-1(3.72e-09)]_9 chrXVI:736578-736908 1.36e-03 54_[+3(2.58e-07)]_27 chrXVI:95014-95498 1.60e-01 58_[+3(7.86e-05)]_23 chrV:404191-404675 5.09e-01 100 chrII:397451-397935 4.48e-01 100 chrX:703299-703399 5.47e-04 52_[+3(1.51e-07)]_29 chrIV:322770-323368 3.89e-01 100 chrX:191451-191551 9.03e-02 53_[+3(4.20e-05)]_28 chrVII:787065-787287 9.82e-01 100 chrX:159766-159866 4.85e-02 25_[+3(2.28e-05)]_56 chrVIII:104997-105671 2.15e-01 100 chrIV:1162726-1162932 9.28e-01 100 chrIX:213438-213922 2.70e-02 100 chrXII:728026-728598 3.28e-02 100 chrXV:976326-976648 1.90e-05 21_[+1(4.05e-09)]_54 chrXIII:424732-424899 8.58e-03 29_[+3(3.85e-06)]_52 chrII:45645-46034 4.98e-02 5_[+3(2.99e-05)]_76 chrIV:1201582-1201977 3.49e-15 19_[+2(4.33e-11)]_12_[+1(2.28e-11)]_\ 17 chrXV:29162-30833 2.74e-01 100 chrXV:87447-88120 5.53e-01 100 chrXV:908619-908899 8.03e-03 26_[-3(2.28e-05)]_55 chrXVI:453974-454458 3.26e-01 100 chrXII:793765-795314 9.90e-02 100 chrVI:64094-64870 8.62e-01 100 chrXV:678081-678318 1.52e-02 48_[+1(7.57e-05)]_27 chrXI:334098-334892 4.69e-01 100 chrXI:141449-142287 9.02e-01 100 chrIV:909628-909939 9.38e-01 100 chrX:454276-454376 2.68e-01 100 chrIV:572166-572313 2.72e-01 100 chrXI:307009-307377 1.01e-02 32_[+3(9.76e-05)]_11_[-3(2.67e-06)]_\ 19 chrVII:878566-878963 1.00e-03 5_[-1(1.21e-07)]_70 chrXV:892238-892600 2.65e-01 100 chrXII:459520-460831 6.79e-01 100 chrIII:13879-14986 8.52e-01 100 chrXI:163337-164470 4.02e-01 100 chrVI:223245-223747 6.30e-01 100 chrVI:199197-199657 1.02e-03 30_[+3(2.58e-07)]_51 chrX:531684-531784 4.90e-08 9_[+1(1.48e-11)]_66 chrX:606714-606814 2.68e-01 100 chrXI:259180-259785 1.83e-01 100 chrXIV:493889-494266 6.57e-01 100 chrXIII:226210-226361 7.88e-02 100 chrXIV:104662-105095 9.07e-07 14_[+1(3.72e-09)]_61 chrX:415814-415914 1.76e-02 62_[-2(8.68e-05)]_11 chrIII:137809-139047 9.01e-02 100 chrVIII:451132-453043 1.55e-01 100 chrII:333176-333316 9.48e-01 100 chrXIV:452084-452302 1.33e-01 100 chrV:122205-122689 2.20e-01 100 chrXVI:172988-174002 5.07e-01 100 chrIV:332677-333161 8.39e-01 100 chrXV:254484-254707 7.05e-01 100 chrV:67555-68974 9.38e-01 100 chrIV:1269868-1270466 2.29e-01 100 chrIV:980828-981175 6.68e-02 100 chrXII:370817-371374 1.93e-01 100 chrXIII:698693-699177 9.50e-01 100 chrVII:592662-592961 1.03e-01 100 chrV:51691-52261 2.66e-01 100 chrIV:491855-492071 2.58e-01 100 chrIV:1080431-1080915 7.21e-01 100 chrX:172668-172768 5.99e-01 100 chrXII:440959-441443 3.11e-01 100 chrXII:1018143-1018798 9.91e-02 100 chrVIII:104411-104570 2.92e-01 100 chrIV:913836-914822 3.40e-01 100 chrVIII:222608-222896 6.42e-03 23_[+3(2.07e-06)]_58 chrXII:952172-953103 2.36e-01 100 chrV:441858-442595 8.09e-01 100 chrXV:92199-92381 4.29e-01 100 chrXIV:7253-7529 9.33e-02 69_[-3(5.80e-05)]_12 chrXIV:63406-63640 6.77e-01 100 chrIII:294684-295051 5.56e-01 100 chrIV:355246-357314 8.22e-01 100 chrII:163217-163701 4.72e-01 100 chrXI:326116-327634 1.44e-01 100 chrV:138521-139550 4.24e-01 100 chrXIV:494553-494757 2.36e-01 100 chrXV:93075-94315 5.63e-01 100 chrIII:163775-164033 6.00e-01 100 chrVI:226567-226895 6.91e-14 16_[-1(2.28e-11)]_12_[-2(2.11e-10)]_\ 20 chrXV:80525-81308 8.55e-01 100 chrVII:115350-115684 2.59e-05 19_[+2(3.21e-09)]_54 chrVIII:164026-164510 4.99e-01 100 chrXI:436608-437092 4.15e-01 100 chrVII:289344-289687 6.18e-02 40_[-3(6.77e-05)]_41 chrVII:345808-346683 6.33e-02 53_[-1(2.28e-05)]_22 chrIII:95944-96314 2.85e-03 18_[-3(4.23e-07)]_63 chrIII:142113-142472 9.46e-03 69_[-3(5.46e-06)]_12 chrXIV:229668-230724 2.10e-01 100 chrIV:386781-387212 2.49e-04 48_[-3(1.51e-07)]_33 chrXIII:669721-669957 8.96e-03 42_[+3(3.41e-06)]_39 chrVIII:122588-123072 2.60e-01 100 chrXIII:252200-252439 3.18e-02 100 chrVI:220047-220310 1.09e-01 38_[+3(6.77e-05)]_43 chrXII:373025-373540 3.27e-03 14_[+3(6.11e-06)]_67 chrXV:444592-446214 1.85e-01 100 chrXIV:442838-443413 1.04e-02 9_[+1(1.75e-05)]_66 chrXIII:290648-290989 5.18e-09 69_[+1(1.10e-11)]_6 chrV:406727-406912 2.49e-01 100 chrII:405735-406173 5.84e-09 10_[+1(3.02e-11)]_19_[+2(8.17e-05)]_\ 19 chrXVI:259305-259701 1.06e-02 39_[-3(2.07e-06)]_42 chrXVI:404693-405815 8.28e-01 100 chrVIII:145984-146439 7.72e-01 100 chrXI:614511-614806 1.05e-03 30_[-3(1.81e-06)]_51 chrVIII:375357-375765 5.72e-01 100 chrXV:160257-160809 7.98e-01 100 chrXIV:715934-716645 1.07e-02 56_[+3(1.16e-05)]_25 chrVII:545204-545719 5.73e-01 100 chrXIII:753803-753931 4.64e-01 100 chrXII:1010148-1010632 7.98e-01 100 chrVIII:147831-148116 1.86e-01 100 chrIX:316879-317737 2.34e-01 100 chrIV:555696-556241 7.11e-02 100 chrX:540359-540459 2.00e-02 30_[+3(1.56e-05)]_51 chrIV:306832-306954 1.91e-01 100 chrVII:823337-823669 5.13e-11 27_[+2(6.49e-09)]_13_[+1(9.12e-10)]_\ 8 chrII:604553-605643 9.77e-01 100 chrXV:1027876-1028757 6.52e-01 100 chrXI:100442-100926 4.55e-03 41_[-2(6.04e-07)]_32 chrIII:177141-177929 5.27e-01 100 chrIV:1243193-1243315 4.90e-01 100 chrXV:409531-409682 6.35e-01 100 chrXI:313304-313607 2.97e-05 5_[-1(1.21e-07)]_70 chrIV:118403-118677 4.18e-02 100 chrXV:678318-678493 7.23e-01 100 chrIV:716545-716897 1.27e-02 42_[+3(1.90e-05)]_39 chrX:99374-99474 5.62e-03 46_[-3(1.05e-06)]_35 chrX:391824-391924 5.57e-01 100 chrIV:599802-600032 2.66e-01 100 chrV:141004-141363 4.38e-03 23_[+3(2.07e-06)]_58 chrXIII:288309-289077 8.69e-01 100 chrXVI:559984-560428 4.50e-06 51_[-1(1.80e-09)]_24 chrXV:962816-963300 7.00e-02 100 chrXII:592407-592765 8.01e-06 57_[-2(1.07e-09)]_16 chrXII:498836-499745 9.27e-01 100 chrX:73636-73736 3.68e-01 100 chrXII:369142-370341 3.40e-01 100 chrXVI:942066-942568 8.13e-01 100 chrXVI:282254-282738 9.96e-01 100 chrII:396117-396321 8.67e-02 100 chrXIII:626134-626943 2.46e-01 100 chrIX:255884-256255 7.29e-01 100 chrXVI:775659-775980 1.32e-08 5_[-1(2.82e-08)]_11_[-2(8.68e-08)]_\ 32 chrVII:774207-774563 2.89e-15 12_[+2(5.08e-13)]_12_[+1(3.54e-10)]_\ 24 chrIII:248651-249057 3.26e-03 27_[+3(5.80e-05)]_2_[+3(6.75e-07)]_\ 33 chrII:139297-139490 8.15e-01 100 chrIV:579369-580603 3.64e-01 100 chrX:608859-608959 3.35e-01 100 chrVIII:120918-121799 2.07e-01 100 chrX:156290-156390 9.99e-02 100 chrVII:834428-834709 5.24e-01 100 chrXV:796942-797357 1.28e-01 100 chrIV:1489052-1489993 4.99e-01 100 chrVIII:127256-127694 2.97e-01 100 chrIV:359438-359791 2.32e-12 11_[+2(3.21e-09)]_35_[+1(5.89e-11)]_\ 2 chrVII:700472-701201 9.58e-01 100 chrXV:159224-160204 6.41e-01 100 chrIV:306897-307381 3.51e-02 100 chrV:99961-100332 9.20e-06 35_[+2(2.21e-05)]_11_[+1(1.60e-07)]_\ 2 chrII:408436-408920 5.59e-01 100 chrV:123453-123736 3.98e-01 100 chrII:87868-88663 5.43e-01 100 chrVII:110341-110825 1.66e-01 100 chrXV:503077-503561 4.87e-01 100 chrXII:875233-875593 2.32e-12 11_[+2(3.21e-09)]_35_[+1(5.89e-11)]_\ 2 chrXVI:107687-108171 1.36e-01 100 chrV:397424-397924 7.14e-02 81_[-3(5.36e-05)] chrIV:466293-466505 2.41e-03 24_[+3(1.38e-06)]_57 chrII:36240-36596 5.04e-05 28_[+2(1.25e-08)]_45 chrIV:221366-221655 5.65e-01 100 chrXIII:302667-302897 7.28e-01 100 chrVII:779468-779847 2.49e-10 7_[+2(6.01e-08)]_11_[+1(1.11e-09)]_\ 30 chrIII:82365-82661 5.72e-08 8_[-1(1.10e-11)]_67 chrXIV:88915-89771 1.99e-02 16_[+3(4.87e-06)]_65 chrX:348912-349012 4.98e-01 100 chrV:78005-79219 3.70e-01 100 chrXV:505083-505389 1.56e-01 100 chrIV:1268848-1269332 9.19e-02 100 chrII:40543-40889 1.42e-05 10_[+3(3.33e-09)]_71 chrX:227726-227826 3.55e-01 100 chrVII:364212-364470 6.01e-01 100 chrXVI:303220-304207 6.16e-01 100 chrXVI:210096-210402 1.05e-07 2_[-1(1.10e-11)]_73 chrV:305822-306073 1.41e-01 100 chrIII:57982-58181 2.98e-01 100 chrXI:617836-618320 8.88e-01 100 chrX:417148-417248 1.43e-01 39_[+3(5.36e-05)]_42 chrVII:609297-609998 5.45e-01 100 chrXVI:297971-298455 6.88e-01 100 chrX:422788-422888 6.48e-10 32_[+2(3.48e-08)]_12_[+1(4.05e-09)]_\ 4 chrX:156947-157047 9.02e-01 100 chrVIII:126518-127002 9.85e-01 100 chrXII:523074-523420 7.58e-01 100 chrIV:491612-491856 8.43e-02 [+3(2.99e-05)]_81 chrXV:87447-88053 4.42e-01 100 chrIII:123413-123797 6.04e-15 31_[-1(2.28e-14)]_11_[-2(3.77e-08)]_\ 6 chrXVI:701245-701533 3.13e-01 100 chrXIV:187047-187531 9.98e-01 100 chrIV:218251-218455 4.42e-02 100 chrIV:427876-428071 9.12e-01 100 chrII:306907-307391 4.08e-01 100 chrXII:515471-515676 3.32e-01 100 chrIX:25945-26429 1.04e-01 100 chrII:779481-779737 1.33e-01 100 chrV:151917-152229 5.58e-01 100 chrXIV:174133-174673 1.72e-01 100 chrVI:220735-221040 8.86e-01 100 chrX:378221-378321 1.78e-11 27_[+2(2.10e-09)]_13_[+1(9.12e-10)]_\ 8 chrVII:98185-98371 1.24e-01 100 chrXVI:810547-810838 5.38e-10 32_[+2(1.25e-08)]_13_[+1(4.81e-09)]_\ 3 chrXVI:435773-436121 9.53e-09 5_[-1(2.82e-08)]_11_[-2(8.68e-08)]_\ 32 chrVIII:383020-383261 2.94e-01 100 chrIV:601040-602303 5.06e-01 100 chrX:374335-374435 1.48e-11 22_[-1(3.02e-11)]_11_[-2(1.32e-07)]_\ 15 chrIV:83379-83804 8.82e-14 5_[+2(1.20e-09)]_10_[+1(1.48e-11)]_\ 33 chrXIII:272941-273143 1.11e-01 10_[+3(3.87e-05)]_71 chrXIII:552557-553315 4.33e-01 100 chrII:141702-142186 6.06e-01 100 chrIV:1269868-1270481 5.22e-02 100 chrVII:401429-401661 1.09e-07 41_[-1(1.10e-11)]_34 chrXI:436808-437292 1.32e-02 9_[+3(3.26e-05)]_72 chrIII:11096-11665 6.71e-01 100 chrVII:366118-366675 9.94e-01 100 chrXIII:894629-895113 3.48e-01 100 chrXIV:502416-502560 6.82e-01 100 chrX:523876-523976 1.40e-06 45_[-2(5.88e-11)]_28 chrXII:922175-922458 1.17e-01 29_[+3(9.76e-05)]_52 chrV:85469-86796 4.87e-01 100 chrXVI:654438-654775 7.12e-01 100 chrVIII:34487-36305 9.95e-04 29_[-2(4.58e-07)]_44 chrXII:911614-911852 1.17e-03 46_[+3(3.41e-06)]_35 chrVII:310615-312335 2.47e-01 100 chrXIII:504864-505129 3.97e-02 27_[+1(1.75e-05)]_48 chrVII:561527-561772 1.37e-01 100 chrXII:150284-150768 3.43e-02 47_[+3(1.72e-05)]_34 chrXII:909916-910400 3.71e-01 100 chrXI:439619-439940 3.14e-03 19_[+3(1.59e-06)]_62 chrXIV:19281-19765 4.12e-01 100 chrXII:131854-132338 3.14e-02 59_[-3(1.16e-05)]_22 chrXII:95413-95897 9.78e-01 100 chrXIV:302721-303687 7.89e-01 100 chrXV:968062-968278 1.59e-01 100 chrVII:316865-317286 8.42e-02 31_[+3(2.50e-05)]_50 chrXVI:109945-110278 1.97e-02 23_[-3(1.28e-05)]_58 chrXI:554589-554911 3.08e-01 100 chrXII:448528-448879 6.10e-10 6_[-1(4.40e-10)]_11_[-2(1.62e-07)]_\ 31 chrVII:736145-736580 3.07e-11 26_[+2(1.32e-07)]_11_[+1(3.02e-11)]_\ 11 chrXV:977973-978223 2.29e-02 57_[+3(1.42e-05)]_24 chrIV:1360315-1360744 3.11e-01 100 chrX:79187-79287 1.05e-02 64_[+3(2.35e-06)]_17 chrXIV:575236-575830 9.02e-01 100 chrXII:721823-722307 6.79e-01 100 chrXV:438497-438869 2.32e-12 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25_[+3(2.74e-05)]_56 chrXI:430707-431179 2.65e-01 100 chrXIII:379199-379563 1.52e-04 51_[-2(8.68e-05)]_1_[+3(1.90e-05)]_\ 2 chrXIII:501793-502162 4.41e-03 51_[+3(3.85e-06)]_30 chrXV:903845-904690 4.47e-01 100 chrV:268498-268701 3.86e-02 100 chrVII:545204-545732 6.61e-01 100 chrVII:277731-278700 1.79e-01 100 chrII:449179-449530 1.61e-01 60_[+3(7.29e-05)]_21 chrI:166158-166471 1.46e-14 1_[+2(4.81e-12)]_12_[+1(2.53e-10)]_\ 35 chrVII:439111-439925 6.63e-01 100 chrXIII:670804-671288 1.62e-02 70_[-3(5.46e-06)]_11 chrXV:832263-832764 4.43e-02 100 chrXII:602853-603280 1.40e-02 18_[+3(3.26e-05)]_63 chrIV:449737-449919 7.85e-02 11_[+3(3.26e-05)]_70 chrIV:995502-995951 8.41e-04 52_[-3(2.17e-07)]_29 chrXIII:887096-888060 1.55e-01 100 chrXIII:556537-556746 5.86e-02 35_[-3(1.90e-05)]_46 chrXIV:61890-62166 9.46e-01 100 chrXVI:280530-281652 8.65e-01 100 chrII:236681-237062 7.63e-01 100 chrXV:407926-408194 1.68e-01 55_[+2(9.23e-05)]_18 chrXV:464341-464860 1.24e-01 71_[-3(5.80e-05)]_10 chrX:79932-80032 1.04e-02 100 chrV:546473-546696 3.61e-02 70_[+3(5.80e-05)]_11 chrIV:541241-541996 2.76e-01 100 chrXVI:696861-697205 1.54e-02 51_[-3(2.50e-05)]_30 chrIV:929306-929481 6.01e-01 100 chrVII:574656-574958 1.85e-01 100 chrXV:729460-729944 7.33e-01 100 chrVII:883434-884013 1.26e-01 100 chrXV:252839-253664 4.54e-01 100 chrV:424630-425246 8.88e-01 100 chrIX:264121-264242 2.09e-02 10_[-3(1.42e-05)]_71 chrV:117759-118219 6.56e-01 100 chrIV:870751-871078 6.98e-02 53_[+3(2.74e-05)]_28 chrI:139021-139365 2.01e-06 7_[+2(2.60e-09)]_66 chrIV:1086811-1087295 6.04e-01 100 chrIX:210632-210903 1.28e-01 100 chrVI:95523-95868 4.88e-03 49_[-3(7.86e-05)]_32 chrIII:292579-292972 4.35e-01 100 chrVII:876253-876611 1.51e-14 10_[+2(4.33e-11)]_12_[+1(2.28e-11)]_\ 26 chrXI:162262-162707 5.13e-07 62_[-1(3.02e-11)]_13 chrXVI:110902-111144 2.51e-01 100 chrIV:915155-915623 1.43e-01 100 chrXVI:639275-639656 1.57e-03 5_[-3(2.50e-05)]_[-3(3.06e-07)]_57 chrVII:882357-883113 3.72e-01 100 chrXIV:63631-64103 4.53e-01 100 chrXII:281893-282377 2.22e-01 100 chrVIII:504992-505476 4.19e-01 100 chrXIII:286665-287034 2.84e-02 47_[+3(7.62e-06)]_34 chrXIV:505443-505927 8.51e-01 100 chrXI:431933-432325 1.30e-01 100 chrVII:845464-845920 2.60e-13 5_[+2(1.20e-09)]_10_[+1(1.48e-11)]_\ 33 chrXII:230996-231518 5.33e-04 36_[+3(5.67e-08)]_45 chrIII:114123-114603 4.30e-01 100 chrVII:328453-328841 2.03e-07 22_[+1(1.10e-11)]_53 chrXVI:745711-746195 3.59e-01 100 chrXII:167844-168210 1.06e-06 22_[-2(2.75e-10)]_51 chrVII:801264-801748 3.14e-01 100 chrVII:599637-599931 6.32e-01 100 chrX:121152-121252 4.66e-01 100 chrIV:129951-130547 3.40e-01 100 chrXIII:123000-123424 9.44e-01 100 chrIII:315506-316092 1.67e-02 12_[+1(9.78e-05)]_63 chrXI:106313-106797 2.01e-01 100 chrXV:900184-900717 5.87e-01 100 chrXIII:258975-259387 2.89e-01 100 chrXIII:222647-222941 1.55e-02 80_[+3(1.16e-05)]_1 chrII:478881-479368 3.13e-01 100 chrVII:541702-542101 1.80e-07 35_[+1(1.10e-11)]_40 chrXIII:288965-289539 2.69e-01 100 chrXIV:414196-414511 1.33e-02 9_[-3(1.28e-05)]_72 chrVII:398577-400213 1.18e-02 100 chrXII:837663-839229 1.80e-01 100 chrXV:842406-842917 2.09e-04 [+3(1.38e-06)]_81 chrII:413903-414325 2.19e-02 13_[+2(3.10e-05)]_60 chrXV:779850-781052 1.75e-01 100 chrXV:875269-875654 2.03e-01 100 chrV:130983-131283 4.56e-10 8_[-1(6.05e-10)]_11_[-2(1.41e-07)]_\ 29 chrII:236883-237367 3.76e-01 100 chrXIII:880468-880634 1.41e-01 42_[-3(6.77e-05)]_39 chrXII:805793-806887 4.52e-01 100 chrXVI:581925-582429 8.24e-01 100 chrX:538415-538515 3.00e-07 33_[+2(2.90e-05)]_11_[+1(2.17e-09)]_\ 4 chrX:197184-197284 1.48e-06 46_[-1(3.54e-10)]_29 chrXII:709531-709777 3.98e-01 100 chrIV:1238068-1238373 5.08e-01 100 chrXII:948006-948229 3.13e-01 100 chrIV:1256851-1257251 1.17e-09 16_[-1(4.05e-09)]_11_[-2(3.77e-08)]_\ 21 chrIV:1175707-1176141 8.97e-01 100 chrXV:506784-507128 2.93e-01 100 chrXII:358734-359218 8.33e-01 100 chrXIV:585415-586567 5.95e-01 100 chrXII:605148-605586 7.82e-01 100 chrXV:778574-778770 9.76e-01 100 chrV:302888-303372 3.82e-01 100 chrX:74476-74576 6.82e-01 100 chrXI:283087-284181 5.15e-01 100 chrIII:177141-178014 3.26e-01 100 chrIV:221582-221934 7.57e-01 100 chrXVI:718379-719437 2.21e-01 100 chrX:526537-526637 1.15e-01 100 chrIII:131858-132147 6.29e-01 100 chrX:99165-99265 1.74e-02 63_[+3(7.62e-06)]_18 chrXIII:162960-163564 4.40e-01 100 chrIV:435033-435331 1.71e-02 51_[+3(3.41e-06)]_30 chrV:59437-59921 2.20e-01 100 chrIV:116171-116334 4.75e-01 100 chrXVI:819322-819813 6.41e-14 10_[+2(9.15e-11)]_13_[+1(5.89e-11)]_\ 25 chrIV:1269047-1269531 4.74e-01 100 chrXIV:107133-107374 4.76e-02 50_[-3(3.55e-05)]_31 chrXIV:351886-352852 8.53e-01 100 chrI:159757-160141 4.37e-03 46_[+3(1.81e-06)]_35 chrXII:833620-833962 2.17e-02 41_[-3(1.42e-05)]_40 chrXVI:650001-650485 8.81e-01 100 chrIV:468352-468836 3.11e-01 100 chrVII:533865-534430 3.72e-01 100 chrVII:364863-365929 5.21e-03 60_[-3(3.26e-05)]_21 chrXV:277534-277954 2.29e-02 25_[-3(6.83e-06)]_56 chrVII:148063-148850 5.58e-01 100 chrXIII:808121-808479 3.43e-10 5_[-1(3.12e-09)]_11_[-2(8.68e-08)]_\ 32 chrIV:434033-434467 5.68e-06 73_[-1(3.72e-09)]_2 chrXVI:289172-289544 1.64e-02 30_[-3(4.87e-06)]_51 chrVII:559341-559825 8.04e-01 100 chrV:423192-423421 7.87e-01 100 chrX:75220-75320 5.91e-01 100 chrII:563876-564360 2.13e-01 100 chrXI:230100-230584 2.51e-01 100 chrVI:269824-269947 6.25e-01 100 chrIV:1013292-1013506 6.01e-01 100 chrXI:109626-109946 1.20e-01 17_[+3(4.56e-05)]_64 chrIV:1359547-1359695 8.20e-01 100 chrIV:323950-324434 2.80e-02 61_[-3(2.28e-05)]_20 chrXII:366116-366479 4.52e-02 34_[-1(3.68e-05)]_41 chrVII:855755-856239 4.05e-02 100 chrVIII:75569-76008 2.62e-02 100 chrXIII:698639-698803 7.57e-02 100 chrV:267665-268149 4.79e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************