Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.013309 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.055719 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.067705 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.011421 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background Finished invoke: name: bg status: 0 time: 0.009155 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 561.675351 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/seqs-shuffled Finished invoke: name: dreme status: 0 time: 56.354276 Invoking: centrimo -seqlen 344 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.208948 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.529254 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background -primary RAGRTCMBSGGTTCGAYYCCS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.454026 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background -primary SCMYTAAMCCACTCGSCCAW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.471176 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background -primary AYCCRTAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.247418 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background -primary CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.295007 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background -primary CCAACTK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.25884 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background -primary AARARA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.314961 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background -primary CAASGATG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.225354 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background -primary CATYACGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.230177 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background -primary CCGTGSA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.222097 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background -primary ATCTTSA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.207521 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background -primary GCTACCGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.209018 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background -primary AGTCTKG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.200028 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background -primary AGMAGAT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.232453 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background -primary GCGTMTGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.237437 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background -primary ATAGTKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.252708 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/spamo_out_16 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background -primary GCTATMA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.220136 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/spamo_out_17 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background -primary AACACSCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml Finished invoke: name: spamo17 status: 0 time: 0.188363 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background --motif RAGRTCMBSGGTTCGAYYCCS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa Finished invoke: name: fimo1 status: 0 time: 0.205977 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background --motif SCMYTAAMCCACTCGSCCAW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa Finished invoke: name: fimo2 status: 0 time: 0.174489 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background --motif AYCCRTAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa Finished invoke: name: fimo3 status: 0 time: 0.11444 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background --motif CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa Finished invoke: name: fimo4 status: 0 time: 0.130417 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background --motif CCAACTK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa Finished invoke: name: fimo5 status: 0 time: 0.122375 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background --motif AARARA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa Finished invoke: name: fimo6 status: 0 time: 0.112857 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background --motif CAASGATG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa Finished invoke: name: fimo7 status: 0 time: 0.120416 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background --motif CATYACGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa Finished invoke: name: fimo8 status: 0 time: 0.125502 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background --motif CCGTGSA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa Finished invoke: name: fimo9 status: 0 time: 0.122733 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background --motif ATCTTSA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa Finished invoke: name: fimo10 status: 0 time: 0.100544 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background --motif GCTACCGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa Finished invoke: name: fimo11 status: 0 time: 0.125867 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background --motif AGTCTKG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa Finished invoke: name: fimo12 status: 0 time: 0.130962 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background --motif AGMAGAT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa Finished invoke: name: fimo13 status: 0 time: 0.329549 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background --motif GCGTMTGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa Finished invoke: name: fimo14 status: 0 time: 0.129253 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background --motif ATAGTKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa Finished invoke: name: fimo15 status: 0 time: 0.125319 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/fimo_out_16 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background --motif GCTATMA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa Finished invoke: name: fimo16 status: 0 time: 0.332281 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/fimo_out_17 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background --motif AACACSCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/RM11-1A--CAT8.fa Finished invoke: name: fimo17 status: 0 time: 0.118722 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/summary.tsv Finished invoke: name: summary status: 0 time: 0.261704 Done