******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrXII:460394-460755 1.0000 100 chrIX:316159-316589 1.0000 100 chrXII:459553-460201 1.0000 100 chrII:477075-477455 1.0000 100 chrXII:796437-796833 1.0000 100 chrXV:216284-216673 1.0000 100 chrVIII:382928-383322 1.0000 100 chrV:305813-306189 1.0000 100 chrXII:922124-922535 1.0000 100 chrXII:932102-932484 1.0000 100 chrVII:254147-254559 1.0000 100 chrXVI:699970-700359 1.0000 100 chrIII:163486-163858 1.0000 100 chrII:332350-332714 1.0000 100 chrXII:713163-713559 1.0000 100 chrXIII:551382-551780 1.0000 100 chrVII:534817-535188 1.0000 100 chrVII:149137-149484 1.0000 100 chrXII:781464-781853 1.0000 100 chrV:140487-140869 1.0000 100 chrXVI:731923-732286 1.0000 100 chrIV:1359422-1359779 1.0000 100 chrII:605749-606128 1.0000 100 chrX:90083-90431 1.0000 100 chrXI:618810-619197 1.0000 100 chrVII:788351-788706 1.0000 100 chrIV:117192-117562 1.0000 100 chrVII:310516-310897 1.0000 100 chrVIII:125937-126286 1.0000 100 chrII:592915-593246 1.0000 100 chrVIII:74977-75347 1.0000 100 chrIV:130579-130941 1.0000 100 chrII:60846-61229 1.0000 100 chrXV:866580-866934 1.0000 100 chrXVI:76368-76708 1.0000 100 chrIV:308007-308360 1.0000 100 chrXV:505133-505487 1.0000 100 chrXII:673868-674221 1.0000 100 chrXV:1028722-1029075 1.0000 100 chrV:53540-53893 1.0000 100 chrXIV:495233-495561 1.0000 100 chrXIV:63126-63458 1.0000 100 chrXV:79783-80114 1.0000 100 chrXII:241656-241993 1.0000 100 chrVIII:505835-506181 1.0000 100 chrIV:1300957-1301302 1.0000 100 chrX:703278-703614 1.0000 100 chrX:75376-75706 1.0000 100 chrII:604124-604464 1.0000 100 chrIV:835802-836228 1.0000 100 chrIV:411288-411617 1.0000 100 chrV:423114-423458 1.0000 100 chrXIII:225381-225711 1.0000 100 chrIX:99653-99992 1.0000 100 chrXVI:406203-406549 1.0000 100 chrXIII:145918-146272 1.0000 100 chrVII:648972-649308 1.0000 100 chrXVI:520206-520524 1.0000 100 chrV:396229-396549 1.0000 100 chrVI:95500-95833 1.0000 100 chrIV:221979-222297 1.0000 100 chrXIII:732059-732389 1.0000 100 chrII:45020-45337 1.0000 100 chrXV:92955-93283 1.0000 100 chrXI:158254-158580 1.0000 100 chrXV:678847-679172 1.0000 100 chrII:165092-165402 1.0000 100 chrX:73424-73744 1.0000 100 chrV:138503-138854 1.0000 100 chrXV:779716-780134 1.0000 100 chrVII:277068-277375 1.0000 100 chrXIII:379213-379573 1.0000 100 chrIV:341290-341596 1.0000 100 chrXVI:744119-744473 1.0000 100 chrX:617751-618103 1.0000 100 chrXII:1019007-1019335 1.0000 100 chrXIV:96091-96477 1.0000 100 chrV:354771-355231 1.0000 100 chrVI:65013-65328 1.0000 100 chrXVI:560081-560450 1.0000 100 chrIII:227778-228168 1.0000 100 chrII:415517-415833 1.0000 100 chrXI:308035-308387 1.0000 100 chrIX:248647-249025 1.0000 100 chrXIII:362906-363249 1.0000 100 chrVII:555355-555677 1.0000 100 chrXVI:769102-769482 1.0000 100 chrXII:366079-366432 1.0000 100 chrXVI:860220-860568 1.0000 100 chrXV:353918-354276 1.0000 100 chrXV:94491-94815 1.0000 100 chrXVI:435794-436130 1.0000 100 chrXIII:572771-573108 1.0000 100 chrV:434440-434763 1.0000 100 chrIV:437616-437971 1.0000 100 chrVIII:115961-116337 1.0000 100 chrII:36238-36571 1.0000 100 chrVI:157829-158161 1.0000 100 chrV:431033-431514 1.0000 100 chrXIII:747755-748124 1.0000 100 chrXVI:880179-880543 1.0000 100 chrVII:438587-438896 1.0000 100 chrV:435659-435978 1.0000 100 chrXIII:259032-259392 1.0000 100 chrV:85131-85438 1.0000 100 chrXIV:442835-443224 1.0000 100 chrXVI:622400-622797 1.0000 100 chrX:390920-391281 1.0000 100 chrXV:274500-274891 1.0000 100 chrX:523907-524261 1.0000 100 chrXI:302758-303133 1.0000 100 chrX:355195-355654 1.0000 100 chrVII:661580-661909 1.0000 100 chrII:405719-406145 1.0000 100 chrXIII:352116-352453 1.0000 100 chrX:424312-424686 1.0000 100 chrX:415827-416198 1.0000 100 chrII:266218-266598 1.0000 100 chrIV:1075329-1075708 1.0000 100 chrVIII:237762-238102 1.0000 100 chrXII:167856-168180 1.0000 100 chrVII:736171-736528 1.0000 100 chrX:542828-543205 1.0000 100 chrXIV:241406-241715 1.0000 100 chrIII:168184-168548 1.0000 100 chrVII:823319-823679 1.0000 100 chrVIII:62599-62898 1.0000 100 chrXV:228164-228509 1.0000 100 chrIV:520813-521158 1.0000 100 chrVII:726450-726742 1.0000 100 chrII:642922-643240 1.0000 100 chrVII:412153-412529 1.0000 100 chrXII:897725-898022 1.0000 100 chrXII:784187-784553 1.0000 100 chrVII:828542-828956 1.0000 100 chrII:197335-197621 1.0000 100 chrVII:440558-440975 1.0000 100 chrVI:191468-191773 1.0000 100 chrXII:628219-628623 1.0000 100 chrV:288244-288680 1.0000 100 chrIV:1201594-1201943 1.0000 100 chrXII:731971-732287 1.0000 100 chrX:531659-532167 1.0000 100 chrX:115854-116178 1.0000 100 chrXIII:131710-132057 1.0000 100 chrXIII:290644-290987 1.0000 100 chrIV:568734-569134 1.0000 100 chrVII:110400-110813 1.0000 100 chrXII:48742-49060 1.0000 100 chrIV:1175707-1176021 1.0000 100 chrII:226937-227300 1.0000 100 chrIX:300127-300445 1.0000 100 chrV:86436-86788 1.0000 100 chrXVI:55953-56439 1.0000 100 chrVII:541695-542097 1.0000 100 chrV:311799-312248 1.0000 100 chrXII:448527-448877 1.0000 100 chrV:487229-487549 1.0000 100 chrXV:226508-226842 1.0000 100 chrXVI:775670-775992 1.0000 100 chrVI:226599-226921 1.0000 100 chrXIII:808139-808485 1.0000 100 chrX:233768-234093 1.0000 100 chrXII:1028256-1028558 1.0000 100 chrXII:875215-875582 1.0000 100 chrVII:1004067-1004392 1.0000 100 chrIII:142610-142934 1.0000 100 chrXIV:632444-632795 1.0000 100 chrXIII:837763-838114 1.0000 100 chrIV:1095222-1095615 1.0000 100 chrVII:287215-287613 1.0000 100 chrIV:1401279-1401589 1.0000 100 chrIII:127560-127872 1.0000 100 chrVI:210504-210867 1.0000 100 chrVII:774182-774604 1.0000 100 chrIV:359420-359762 1.0000 100 chrIV:667862-668248 1.0000 100 chrXV:300934-301318 1.0000 100 chrXVI:581904-582266 1.0000 100 chrIV:946136-946549 1.0000 100 chrXVI:689400-689793 1.0000 100 chrVII:876235-876571 1.0000 100 chrXVI:819362-819706 1.0000 100 chrII:326627-327030 1.0000 100 chrV:176938-177386 1.0000 100 chrVII:845487-845874 1.0000 100 chrV:492214-492588 1.0000 100 chrV:469290-469640 1.0000 100 chrIII:151172-151514 1.0000 100 chrXII:592403-592763 1.0000 100 chrIV:1256913-1257245 1.0000 100 chrXI:578797-579220 1.0000 100 chrXII:797018-797352 1.0000 100 chrXIII:296808-297105 1.0000 100 chrV:99973-100291 1.0000 100 chrX:378193-378529 1.0000 100 chrXIV:102557-102950 1.0000 100 chrII:645003-645340 1.0000 100 chrIV:1017056-1017441 1.0000 100 chrX:414815-415114 1.0000 100 chrXI:162349-162707 1.0000 100 chrVII:205361-205737 1.0000 100 chrVII:878574-878980 1.0000 100 chrXI:74465-74806 1.0000 100 chrIV:802588-802956 1.0000 100 chrXVI:210096-210423 1.0000 100 chrX:422777-423103 1.0000 100 chrVII:738961-739319 1.0000 100 chrIX:370248-370588 1.0000 100 chrIV:645057-645371 1.0000 100 chrX:651294-651586 1.0000 100 chrXIV:444475-444772 1.0000 100 chrVII:779452-779829 1.0000 100 chrVI:101224-101554 1.0000 100 chrIX:257375-257685 1.0000 100 chrX:538414-538740 1.0000 100 chrVIII:103922-104216 1.0000 100 chrIV:1305466-1305805 1.0000 100 chrI:166136-166493 1.0000 100 chrVII:422926-423310 1.0000 100 chrIX:254250-254527 1.0000 100 chrX:374393-374738 1.0000 100 chrXIII:420454-420812 1.0000 100 chrIV:1150728-1151083 1.0000 100 chrXIII:480521-480846 1.0000 100 chrX:59045-59328 1.0000 100 chrIV:488552-489034 1.0000 100 chrV:135292-135640 1.0000 100 chrV:551166-551500 1.0000 100 chrXI:140913-141255 1.0000 100 chrXII:962871-963217 1.0000 100 chrVI:180832-181212 1.0000 100 chrXI:313320-313614 1.0000 100 chrXIII:168666-169044 1.0000 100 chrXV:663700-664038 1.0000 100 chrVI:167281-167636 1.0000 100 chrVI:162072-162379 1.0000 100 chrVIII:475560-475924 1.0000 100 chrXI:517819-518120 1.0000 100 chrXI:108768-109070 1.0000 100 chrXII:793754-794082 1.0000 100 chrXV:438487-438870 1.0000 100 chrVII:122118-122528 1.0000 100 chrV:441842-442603 1.0000 100 chrVII:115333-115683 1.0000 100 chrVII:544452-544818 1.0000 100 chrIV:410226-410560 1.0000 100 chrXIV:374714-375046 1.0000 100 chrVI:137328-137700 1.0000 100 chrIV:83393-83729 1.0000 100 chrXV:282008-282331 1.0000 100 chrVIII:358384-358724 1.0000 100 chrX:354079-354438 1.0000 100 chrXV:340173-340522 1.0000 100 chrXII:214796-215099 1.0000 100 chrXII:374203-374560 1.0000 100 chrXV:594270-594573 1.0000 100 chrIV:434089-434450 1.0000 100 chrXV:288040-288386 1.0000 100 chrV:61761-62110 1.0000 100 chrXVI:572141-572538 1.0000 100 chrIV:992689-993020 1.0000 100 chrXII:605203-605580 1.0000 100 chrIII:295307-295777 1.0000 100 chrVII:730990-731331 1.0000 100 chrVI:221754-222053 1.0000 100 chrVII:794255-794580 1.0000 100 chrXIII:195959-196315 1.0000 100 chrVII:857278-857653 1.0000 100 chrXII:734641-734964 1.0000 100 chrXIV:104657-105010 1.0000 100 chrXII:426967-427297 1.0000 100 chrXVI:856752-857083 1.0000 100 chrXII:498534-498860 1.0000 100 chrVIII:134194-134512 1.0000 100 chrXV:110867-111154 1.0000 100 chrIII:123425-123791 1.0000 100 chrIV:619846-620193 1.0000 100 chrXIII:754431-754723 1.0000 100 chrXIV:631759-632062 1.0000 100 chrIX:183340-183668 1.0000 100 chrXII:92394-92776 1.0000 100 chrVII:328427-328822 1.0000 100 chrX:396633-396962 1.0000 100 chrIX:68237-68507 1.0000 100 chrXIII:586542-586866 1.0000 100 chrIII:149757-150121 1.0000 100 chrXV:571810-572115 1.0000 100 chrVIII:296909-297193 1.0000 100 chrXI:490802-491102 1.0000 100 chrI:138995-139360 1.0000 100 chrIV:980842-981184 1.0000 100 chrII:347437-347791 1.0000 100 chrIX:197430-197759 1.0000 100 chrIV:1352288-1352664 1.0000 100 chrXI:513241-513544 1.0000 100 chrXVI:338764-339084 1.0000 100 chrXI:46680-46960 1.0000 100 chrXII:656840-657154 1.0000 100 chrXVI:378679-378937 1.0000 100 chrI:81965-82263 1.0000 100 chrVII:930867-931177 1.0000 100 chrX:517697-518031 1.0000 100 chrXV:113652-113942 1.0000 100 chrIX:174925-175203 1.0000 100 chrV:443105-443393 1.0000 100 chrII:350669-350990 1.0000 100 chrVII:700506-701210 1.0000 100 chrXI:458446-458764 1.0000 100 chrVII:185599-185921 1.0000 100 chrXIII:372324-372612 1.0000 100 chrX:204561-204940 1.0000 100 chrXVI:188651-188911 1.0000 100 chrXIII:321047-321346 1.0000 100 chrVIII:466827-467126 1.0000 100 chrXV:253823-254101 1.0000 100 chrVII:366077-366412 1.0000 100 chrIV:217202-217500 1.0000 100 chrXI:84053-84336 1.0000 100 chrIII:178347-178634 1.0000 100 chrXV:978842-979111 1.0000 100 chrIV:884228-884592 1.0000 100 chrV:131008-131307 1.0000 100 chrIV:519623-519915 1.0000 100 chrXIII:463401-463770 1.0000 100 chrV:438562-438852 1.0000 100 chrXV:980565-980873 1.0000 100 chrXIV:726031-726370 1.0000 100 chrXVI:810555-810833 1.0000 100 chrVIII:146126-146440 1.0000 100 chrX:157472-157768 1.0000 100 chrXVI:302701-302979 1.0000 100 chrVIII:148956-149236 1.0000 100 chrIX:336263-336567 1.0000 100 chrV:117715-118258 1.0000 100 chrXV:464344-464633 1.0000 100 chrVII:405413-405694 1.0000 100 chrXV:976347-976597 1.0000 100 chrXII:975886-976187 1.0000 100 chrII:9438-9730 1.0000 100 chrXVI:794532-794790 1.0000 100 chrXII:1051984-1052263 1.0000 100 chrIV:1450932-1451189 1.0000 100 chrX:541407-541688 1.0000 100 chrXII:818500-818779 1.0000 100 chrXV:710088-710339 1.0000 100 chrXIV:405710-405974 1.0000 100 chrIII:82383-82665 1.0000 100 chrX:197204-197476 1.0000 100 chrIII:90833-91089 1.0000 100 chrII:167929-168198 1.0000 100 chrIV:1461585-1461871 1.0000 100 chrVII:706982-707235 1.0000 100 chrXI:431397-431646 1.0000 100 chrIV:579085-579338 1.0000 100 chrVII:319735-319985 1.0000 100 chrIV:358133-358379 1.0000 100 chrXIV:547059-547337 1.0000 100 chrXI:219732-220053 1.0000 100 chrIV:490997-491241 1.0000 100 chrIV:229522-229764 1.0000 100 chrVI:223927-224170 1.0000 100 chrI:181122-181365 1.0000 100 chrXVI:281653-281896 1.0000 100 chrV:362216-362456 1.0000 100 chrIV:321681-321938 1.0000 100 chrVIII:175099-175337 1.0000 100 chrIX:325713-326013 1.0000 100 chrXIII:504887-505122 1.0000 100 chrX:607867-608130 1.0000 100 chrVIII:388754-389024 1.0000 100 chrIII:382-519 1.0000 100 chrI:182401-182635 1.0000 100 chrXIV:569773-569984 1.0000 100 chrII:89682-89910 1.0000 100 chrXIV:568020-568240 1.0000 100 chrXII:522188-522416 1.0000 100 chrXIII:298576-298815 1.0000 100 chrXV:161164-161384 1.0000 100 chrXV:968167-968372 1.0000 100 chrIX:210636-210844 1.0000 100 chrXI:382205-382425 1.0000 100 chrXIV:525038-525233 1.0000 100 chrXIV:330846-331067 1.0000 100 chrXII:282535-282832 1.0000 100 chrXV:487409-487615 1.0000 100 chrXI:379654-379879 1.0000 100 chrV:270385-270598 1.0000 100 chrIV:1355744-1355945 1.0000 100 chrXII:262853-263058 1.0000 100 chrXII:818886-819147 1.0000 100 chrII:181385-181579 1.0000 100 chrX:391879-392092 1.0000 100 chrXV:159734-159909 1.0000 100 chrVII:561544-561762 1.0000 100 chrXIII:91855-92062 1.0000 100 chrX:745122-745466 1.0000 100 chrVII:856765-856937 1.0000 100 chrX:139447-139695 1.0000 100 chrXV:780596-780848 1.0000 100 chrXIII:768269-768461 1.0000 100 chrVIII:34697-35041 1.0000 100 chrIX:324205-324396 1.0000 100 chrVIII:132948-133131 1.0000 100 chrVII:401447-401632 1.0000 100 chrVIII:35424-35768 1.0000 100 chrV:207336-207514 1.0000 100 chrXIII:183803-183990 1.0000 100 chrXV:168120-168296 1.0000 100 chrXII:369773-370117 1.0000 100 chrXIV:499341-499515 1.0000 100 chrXIV:518993-519158 1.0000 100 chrXI:776-1120 1.0000 100 chrXIV:89334-89678 1.0000 100 chrXI:67817-67995 1.0000 100 chrXVI:404641-404795 1.0000 100 chrXIV:500283-500627 1.0000 100 chrII:88087-88431 1.0000 100 chrXV:110274-110618 1.0000 100 chrXII:424255-424408 1.0000 100 chrVIII:381592-381936 1.0000 100 chrX:663905-664249 1.0000 100 chrXII:199250-199594 1.0000 100 chrV:423982-424326 1.0000 100 chrV:85845-86189 1.0000 100 chrII:681984-682151 1.0000 100 chrXII:233333-233697 1.0000 100 chrXIII:552881-553225 1.0000 100 chrXV:407619-407963 1.0000 100 chrXII:838831-838918 1.0000 87 chrX:227846-228190 1.0000 100 chrVIII:555850-556194 1.0000 100 chrXV:160267-160611 1.0000 100 chrXVI:405279-405623 1.0000 100 chrVII:609432-609776 1.0000 100 chrXI:558721-559065 1.0000 100 chrXIII:163780-164124 1.0000 100 chrVIII:120139-120483 1.0000 100 chrV:249814-249946 1.0000 100 chrXII:1012189-1012291 1.0000 100 chrI:71902-72246 1.0000 100 chrIV:45536-45880 1.0000 100 chrV:397356-397700 1.0000 100 chrVIII:556689-556862 1.0000 100 chrV:78705-79049 1.0000 100 chrXII:806459-806803 1.0000 100 chrXII:202016-202360 1.0000 100 chrXII:636890-637234 1.0000 100 chrXV:234345-234689 1.0000 100 chrVII:346054-346398 1.0000 100 chrIV:929640-929984 1.0000 100 chrXII:637742-638086 1.0000 100 chrXII:254561-254905 1.0000 100 chrVII:847905-848249 1.0000 100 chrIX:317184-317528 1.0000 100 chrVII:479861-480205 1.0000 100 chrIII:313759-314103 1.0000 100 chrXII:232527-232871 1.0000 100 chrIX:317389-317733 1.0000 100 chrXII:233333-233733 1.0000 100 chrI:72135-72479 1.0000 100 chrI:72675-73019 1.0000 100 chrVII:480060-480404 1.0000 100 chrI:72446-72790 1.0000 100 chrXII:199449-199793 1.0000 100 chrVIII:120348-120692 1.0000 100 chrXIII:163981-164325 1.0000 100 chrXII:1012303-1012647 1.0000 100 chrVIII:381793-382137 1.0000 100 chrXIV:500484-500828 1.0000 100 chrXII:1012563-1012907 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 471 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 47087 N= 471 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.290 C 0.210 G 0.210 T 0.290 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/RM11-1A--CAT8/background): A 0.308 C 0.192 G 0.192 T 0.308 ******************************************************************************** ******************************************************************************** MOTIF SCMYTAAMCCACTCGSCCAW MEME-1 width = 20 sites = 125 llr = 2005 E-value = 1.5e-415 ******************************************************************************** -------------------------------------------------------------------------------- Motif SCMYTAAMCCACTCGSCCAW MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::41:766:2a:21:2::74 pos.-specific C 6766::23a6:9:5:38a:2 probability G 43:::122:1::12a52:1: matrix T :::3a2:::1:172::::23 bits 2.4 * * * 2.1 * * * 1.9 * * * 1.7 * * * ** Relative 1.4 ** * * ** * ** Entropy 1.2 ** * * ** * ** (23.1 bits) 1.0 *** * * ** * ** 0.7 ****** ***** **** 0.5 ******************* 0.2 ******************** 0.0 -------------------- Multilevel CCCCTAAACCACTCGGCCAA consensus GGAT TGC A AT CG TT sequence C A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCMYTAAMCCACTCGSCCAW MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------- chrXII:592403-592763 + 61 2.55e-11 TAAATCTGAC GCCTTAAACCACTCGGCCAA ACTCCCATTG chrXII:731971-732287 - 17 2.55e-11 TAAATCTGAC GCCTTAAACCACTCGGCCAA ACTCCCATTG chrX:617751-618103 - 48 2.55e-11 TAAATCTGAC GCCTTAAACCACTCGGCCAA ACTCCCATTG chrII:9438-9730 - 55 5.14e-11 TAAGTCTGCC GCCTTAGACCACTCGGCCAA CCCTCCACGA chrXIV:726031-726370 + 42 5.14e-11 TAAGTCTGCC GCCTTAGACCACTCGGCCAA CCCTCCAAAG chrIV:519623-519915 - 30 5.14e-11 TAAGTCTGCC GCCTTAGACCACTCGGCCAA CCCTCCGTAA chrXI:84053-84336 - 70 5.14e-11 TAAGTCTGCC GCCTTAGACCACTCGGCCAA CCCTCCATAC chrII:347437-347791 - 45 5.14e-11 TAAGTCTGCC GCCTTAGACCACTCGGCCAA CCCTCCGTAT chrXII:962871-963217 + 36 5.14e-11 TAAGTCTGCC GCCTTAGACCACTCGGCCAA CCCTCCGTCG chrX:424312-424686 + 41 5.14e-11 TAAGTCTGCC GCCTTAGACCACTCGGCCAA CCCTCCATCT chrIV:980842-981184 + 67 8.03e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAA GTTGCCTCAA chrIV:1305466-1305805 - 51 8.03e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAA GTTGCCTTAA chrV:86436-86788 - 48 8.03e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAA GTTGCCATAA chrII:226937-227300 - 13 8.03e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAA GTTGCCTCGT chrXII:167856-168180 + 32 8.03e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAA GTTGCCATAT chrX:523907-524261 + 34 8.03e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAA GTTGCCTTTA chrXIII:259032-259392 + 52 8.03e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAA GTTGCCATAC chrIV:437616-437971 - 35 8.03e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAA GTTGCCTTAC chrXVI:689400-689793 - 25 1.25e-10 TCAAGTCTGT CGCCTTAACCACTCGGCCAT AGTGCCCAAA chrIX:248647-249025 - 70 1.25e-10 TCAAGTCTGT CGCCTTAACCACTCGGCCAT AGTGCCTAAA chrIII:227778-228168 - 25 1.25e-10 TCGAGTCTCT CGCCTTAACCACTCGGCCAT AGTGCCATTT chrIV:1150728-1151083 + 61 1.57e-10 TAGCAGGCAT CGCCTTAACCACTCGGCCAC TGGGACTGAA chrVI:191468-191773 + 18 1.57e-10 AGCAGGGCAT CGCCTTAACCACTCGGCCAC TGGGACAGAA chrXII:784187-784553 - 40 1.57e-10 TAGCAGGCAT CGCCTTAACCACTCGGCCAC TGGGACGGTT chrXV:274500-274891 - 34 1.57e-10 AGCAGGGCAT CGCCTTAACCACTCGGCCAC TGGGACACGA chrXV:980565-980873 - 12 5.90e-10 GAGAATCATT CCACTAGACCACACGCCCAT ACAATTTGTG chrXII:1051984-1052263 + 46 2.54e-09 TTAGCACGGT GCCTTAACCAACTGGGCCAA GAGACCATGA chrXV:464344-464633 - 10 2.54e-09 GAGAATCATA CCACTAGACCACACGCCCTT GTTAACTTG chrV:443105-443393 + 51 2.54e-09 TTAGCACGGT GCCTTAACCAACTGGGCCAA GAGACCAAAT chrXII:92394-92776 - 11 2.54e-09 GAGAATCATA CCACTAGACCACACGCCCTT ATTAACTTGT chrIX:183340-183668 + 34 2.54e-09 TTAGCACGGT GCCTTAACCAACTGGGCCAA GAGACCAGGA chrXII:734641-734964 - 56 2.54e-09 TTAGCACGGT GCCTTAACCAACTGGGCCAA GAGACCAAAC chrXIII:195959-196315 + 66 2.54e-09 GAGAATCATA CCACTAGACCACACGCCCTT GTGAACTTGT chrV:551166-551500 + 50 2.54e-09 TTAGCACGGT GCCTTAACCAACTGGGCCAA GAGACCTGTA chrVII:738961-739319 - 38 2.54e-09 TTAGCACGGT GCCTTAACCAACTGGGCCAA GAGACCTATT chrXVI:819362-819706 - 51 2.54e-09 TTAGCACGGT GCCTTAACCAACTGGGCCAA GAGACCATTC chrIV:667862-668248 + 50 2.54e-09 TTAGCACGGT GCCTTAACCAACTGGGCCAA GAGACCAATT chrII:197335-197621 - 72 2.54e-09 TAGCACGGT GCCTTAACCAACTGGGCCAA GAGACCTTGA chrXVI:880179-880543 + 33 2.54e-09 TTAGCACGGT GCCTTAACCAACTGGGCCAA GAGACCATTA chrXIV:568020-568240 - 33 2.95e-09 GAGAATCATA CCACTAGACCACACGCCCGA TTATTTTATG chrXI:458446-458764 - 8 2.95e-09 TGAATCAGGC GCCTTAGACCGCTCGGCCAA ACAACCA chrVII:857278-857653 + 51 2.95e-09 TGAATCAGGC GCCTTAGACCGCTCGGCCAA ACAACCACTT chrVII:422926-423310 - 30 2.95e-09 TGAATCAGGC GCCTTAGACCGCTCGGCCAA ACAACCACTT chrVI:101224-101554 - 35 2.95e-09 GAGAATCATA CCACTAGACCACACGCCCGA ATTATTGTTG chrVII:205361-205737 - 28 2.95e-09 TGAATCAGGC GCCTTAGACCGCTCGGCCAA ACAACCACTT chrXV:300934-301318 - 19 2.95e-09 GAGAATCATA CCACTAGACCACACGCCCGA TCTTTTCTGA chrXII:628219-628623 - 18 2.95e-09 TGAATCAGGC GCCTTAGACCGCTCGGCCAA ACAACCACTT chrXIV:442835-443224 - 33 2.95e-09 TGAATCAGGC GCCTTAGACCGCTCGGCCAA ACAACCACTT chrI:138995-139360 - 23 3.91e-09 GAGAATCATA CCACTAGACCACACGCCCGT ACTAATTGAT chrXII:975886-976187 + 45 4.51e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCAT GGAGTCTTTT chrXVI:810555-810833 - 38 4.51e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCAT GGAGTCGCAA chrVII:730990-731331 - 33 4.51e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCAT GGAGTCTTTT chrVI:137328-137700 + 70 4.51e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCAT GGAGTCAGTC chrXI:74465-74806 - 45 4.51e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCAT GGAGTCTAAT chrXIV:102557-102950 - 19 4.51e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCAT GGAGTCTTAT chrIII:127560-127872 - 56 4.51e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCAT GGAGTCATTT chrXIV:632444-632795 - 36 4.51e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCAT GGAGTCACTT chrXV:228164-228509 - 51 4.51e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCAT GGAGTCTAAT chrXII:656840-657154 + 42 5.16e-09 AGCGCGCTAC CGACTACGCCACACGCCCAA TTTTCTTGTT chrIV:410226-410560 - 34 5.16e-09 AGCGCGCTAC CGACTACGCCACACGCCCAA TATTTGTATG chrVII:774182-774604 - 4 5.16e-09 AGCGCGCTAC CGACTACGCCACACGCCCAA TTA chrXI:517819-518120 - 67 6.76e-09 AGCGCGCTAC CGACTACGCCACACGCCCAT AGTAGATATA chrIX:174925-175203 - 23 8.74e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCAT AGAAGCTCGT chrXV:113652-113942 - 61 8.74e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCAT AGAAGCTAAA chrXIV:104657-105010 - 28 8.74e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCAT AGAAGCTGAG chrIV:83393-83729 - 35 8.74e-09 TTGGATTTTA CCACTAAACCACTTGCGCTA AGTGAACTTG chrX:59045-59328 + 11 8.74e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCAT AGAAGCTTCT chrIII:142610-142934 + 32 8.74e-09 TTGGATTTTA CCACTAAACCACTTGCGCTA GTAATCTTGA chrII:266218-266598 - 26 8.74e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCAT AGAAGCAGTT chrVIII:115961-116337 + 55 8.74e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCAT AGAAGCTCTA chrXV:353918-354276 + 41 8.74e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCAT AGAAGCAGTA chrVII:930867-931177 + 34 1.12e-08 TTGGATTTTA CCACTAAACCACTTGCGCTT ACTGATTATA chrX:396633-396962 + 32 1.12e-08 TTGGATTTTA CCACTAAACCACTTGCGCTT ACTTTTGATA chrV:61761-62110 + 58 1.12e-08 TTGGATTTTA CCACTAAACCACTTGCGCTT ACTATTTGTT chrVI:162072-162379 - 51 1.12e-08 TTGGATTTTA CCACTAAACCACTTGCGCTT GTTTTCTTGT chrVI:180832-181212 + 55 1.12e-08 TTGGATTTTA CCACTAAACCACTTGCGCTT ATTTCTTGGA chrVII:845487-845874 - 17 1.12e-08 TTGGATTTTA CCACTAAACCACTTGCGCTT GTTATTTATA chrXVI:860220-860568 - 33 1.12e-08 TTGGATTTTA CCACTAAACCACTTGCGCTT GTTATTTACA chrIV:992689-993020 - 26 1.26e-08 TTGGATTTTA CCACTAAACCACTTGCGCTC ACAATTGTTG chrXI:219732-220053 - 51 1.60e-08 AGCGCGCTAC CGACTACGCCACACGCCCTA TTTACTGTTA chrX:197204-197476 + 78 1.60e-08 AGCGCGCTAC CGACTACGCCACACGCCCTA ATA chrXV:282008-282331 - 43 1.79e-08 TTGGATTTTA CCACTAAACCACTTGCGCGC TTTCATGTTA chrXIII:321047-321346 + 56 2.25e-08 AGCGCGCTAC CGACTACGCCACACGCCCGA TTTGTATTGA chrXVI:856752-857083 - 33 2.25e-08 AGCGCGCTAC CGACTACGCCACACGCCCGA ATCTTGTTGT chrXV:226508-226842 + 39 4.67e-08 TTGGATTTTA CCACTAAACCACTTGCGCTG AATTTCTTGA chrVIII:146126-146440 + 64 7.51e-08 AGCGCGCTAC CGACTACGCCACACGCCCTG ATATTTGTTG chrIII:123425-123791 + 73 8.23e-08 GAGAATCATA CCTCTAGACCACACGCCCTC CTTTGAAA chrXV:594270-594573 + 37 1.07e-07 TAAATTCTAA CCACTGAACCACTTGCGCGT TTCAATCAAT chrV:138503-138854 - 36 1.27e-07 AGACGCGTTG CCATTACGCCACGCGAGCAT TATTTATTGA chrXI:490802-491102 - 72 1.89e-07 GTAGCCAGA CGCCGTGACCATTGGGCCAC GAGGAACAAG chrIV:619846-620193 + 47 1.89e-07 CGTAGCCAGA CGCCGTGACCATTGGGCCAC GAGGAACAAG chrXII:374203-374560 - 30 1.89e-07 CGTAGCCAGA CGCCGTGACCATTGGGCCAC GAGGAACAAG chrXV:340173-340522 + 49 1.89e-07 CGTAGCCAGA CGCCGTGACCATTGGGCCAC GAGGAACAGA chrV:492214-492588 + 48 1.89e-07 CGTAGCCAGA CGCCGTGACCATTGGGCCAC GAGGAATAGG chrX:233768-234093 - 65 1.89e-07 CGTAGCCAGA CGCCGTGACCATTGGGCCAC GAGGAACAAG chrX:374393-374738 + 45 2.21e-07 AGACGCGTTG CCATTACGCCACGCGAGCTA CTATTTGTTG chrXI:162349-162707 + 63 2.21e-07 AGACGCGTTG CCATTACGCCACGCGAGCTA ATATTTGTTT chrXIII:131710-132057 + 46 2.21e-07 AGACGCGTTG CCATTACGCCACGCGAGCTA AATTTCTTGA chrVII:828542-828956 + 78 2.21e-07 AGACGCGTTG CCATTACGCCACGCGAGCTA CTG chrVII:736171-736528 - 39 2.21e-07 AGACGCGTTG CCATTACGCCACGCGAGCTA TTGAAATTAC chrXIII:747755-748124 + 57 2.21e-07 AGACGCGTTG CCATTACGCCACGCGAGCTA GTCATATATT chrV:438562-438852 - 49 2.56e-07 TTAAGCAGAT GCCATAACCGACTAGACCAC GAAACCTAAT chrXIII:372324-372612 + 75 2.56e-07 TTAAGCAGAT GCCATAACCGACTAGACCAC GAAACC chrXIII:586542-586866 + 30 2.56e-07 TTAAGCAGAT GCCATAACCGACTAGACCAC GAAACCATAG chrXV:663700-664038 + 41 2.56e-07 TTAAGCAGAT GCCATAACCGACTAGACCAC GAAACCACTA chrXIII:420454-420812 + 53 2.56e-07 TTAAGCAGAT GCCATAACCGACTAGACCAC GAAACCTGTT chrX:378193-378529 - 55 2.56e-07 TTAAGCAGAT GCCATAACCGACTAGACCAC GAAACCTATT chrV:469290-469640 - 48 2.56e-07 TTAAGCAGAT GCCATAACCGACTAGACCAC GAAACCAATT chrVII:412153-412529 + 51 2.56e-07 TTAAGCAGAT GCCATAACCGACTAGACCAC GAAACCAGTT chrVII:823319-823679 - 39 2.56e-07 TTAAGCAGAT GCCATAACCGACTAGACCAC GAAACCACTC chrXI:308035-308387 + 31 2.56e-07 TTAAGCAGAT GCCATAACCGACTAGACCAC GAAACCACTT chrXIV:631759-632062 + 40 2.75e-07 GAGAATCATA CCTCTAGACCACACGCCCGG TAGAAGTTGT chrXII:605203-605580 + 74 6.06e-07 GAAGCTCTAA CCACTGAGCTACACGAGCAT TTTCGAA chrII:326627-327030 + 62 8.12e-07 TAAAGGCGAC GTCTTGAACCACTGGACCAT TGGACCCGGA chrXIII:808139-808485 + 38 8.12e-07 AAAGTGATAA CCACTACACTATAGGACCTT TTTCTTCTGT chrIV:802588-802956 + 63 8.59e-07 AAAGTGATAA CCACTACACTATAGGACCGA CAATTCATGT chrIV:645057-645371 + 43 9.58e-07 AAAGTGATAA CCACTACACTATAGGACCGT AACAACTGTG chrIII:168184-168548 + 39 1.01e-06 AAAGTGATAA CCACTACACTATAGGACCAG GACTTCTTGT chrXVI:775670-775992 + 38 1.07e-06 TGCTGCGCTA CCACTGCGCCATACGAGCTT TTGAATTATG chrII:642922-643240 + 30 1.07e-06 TGCTGCGCTA CCACTGCGCCATACGAGCTT TCTATTACAT chrXVI:435794-436130 + 35 1.07e-06 TGCTGCGCTA CCACTGCGCCATACGAGCTT TTGTTGTATA chrIV:1256913-1257245 + 33 1.67e-06 TGAATTCTAA CCACTGAACCACTTTCGCTA AGAAGATCTA chrVIII:134194-134512 - 16 1.83e-06 AAAGTGATAA CCACTACACTATAGGACCGG AACTTACTGG chrXII:448527-448877 + 52 1.83e-06 AAAGTGATAA CCACTACACTATAGGACCGG AACTTCTTGA chrIV:520813-521158 - 35 2.94e-06 AAAGTGATAA CCACTACACTATAGGACCCT AAAATGGACG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCMYTAAMCCACTCGSCCAW MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:592403-592763 2.5e-11 60_[+1]_20 chrXII:731971-732287 2.5e-11 16_[-1]_64 chrX:617751-618103 2.5e-11 47_[-1]_33 chrII:9438-9730 5.1e-11 54_[-1]_26 chrXIV:726031-726370 5.1e-11 41_[+1]_39 chrIV:519623-519915 5.1e-11 29_[-1]_51 chrXI:84053-84336 5.1e-11 69_[-1]_11 chrII:347437-347791 5.1e-11 44_[-1]_36 chrXII:962871-963217 5.1e-11 35_[+1]_45 chrX:424312-424686 5.1e-11 40_[+1]_40 chrIV:980842-981184 8e-11 66_[+1]_14 chrIV:1305466-1305805 8e-11 50_[-1]_30 chrV:86436-86788 8e-11 47_[-1]_33 chrII:226937-227300 8e-11 12_[-1]_68 chrXII:167856-168180 8e-11 31_[+1]_49 chrX:523907-524261 8e-11 33_[+1]_47 chrXIII:259032-259392 8e-11 51_[+1]_29 chrIV:437616-437971 8e-11 34_[-1]_46 chrXVI:689400-689793 1.3e-10 24_[-1]_56 chrIX:248647-249025 1.3e-10 69_[-1]_11 chrIII:227778-228168 1.3e-10 24_[-1]_56 chrIV:1150728-1151083 1.6e-10 60_[+1]_20 chrVI:191468-191773 1.6e-10 17_[+1]_63 chrXII:784187-784553 1.6e-10 39_[-1]_41 chrXV:274500-274891 1.6e-10 33_[-1]_47 chrXV:980565-980873 5.9e-10 11_[-1]_69 chrXII:1051984-1052263 2.5e-09 45_[+1]_35 chrXV:464344-464633 2.5e-09 9_[-1]_71 chrV:443105-443393 2.5e-09 50_[+1]_30 chrXII:92394-92776 2.5e-09 10_[-1]_70 chrIX:183340-183668 2.5e-09 33_[+1]_47 chrXII:734641-734964 2.5e-09 55_[-1]_25 chrXIII:195959-196315 2.5e-09 65_[+1]_15 chrV:551166-551500 2.5e-09 49_[+1]_31 chrVII:738961-739319 2.5e-09 37_[-1]_43 chrXVI:819362-819706 2.5e-09 50_[-1]_30 chrIV:667862-668248 2.5e-09 49_[+1]_31 chrII:197335-197621 2.5e-09 71_[-1]_9 chrXVI:880179-880543 2.5e-09 32_[+1]_48 chrXIV:568020-568240 2.9e-09 32_[-1]_48 chrXI:458446-458764 2.9e-09 7_[-1]_73 chrVII:857278-857653 2.9e-09 50_[+1]_30 chrVII:422926-423310 2.9e-09 29_[-1]_51 chrVI:101224-101554 2.9e-09 34_[-1]_46 chrVII:205361-205737 2.9e-09 27_[-1]_53 chrXV:300934-301318 2.9e-09 18_[-1]_62 chrXII:628219-628623 2.9e-09 17_[-1]_63 chrXIV:442835-443224 2.9e-09 32_[-1]_48 chrI:138995-139360 3.9e-09 22_[-1]_58 chrXII:975886-976187 4.5e-09 44_[+1]_36 chrXVI:810555-810833 4.5e-09 37_[-1]_43 chrVII:730990-731331 4.5e-09 32_[-1]_48 chrVI:137328-137700 4.5e-09 69_[+1]_11 chrXI:74465-74806 4.5e-09 44_[-1]_36 chrXIV:102557-102950 4.5e-09 18_[-1]_62 chrIII:127560-127872 4.5e-09 55_[-1]_25 chrXIV:632444-632795 4.5e-09 35_[-1]_45 chrXV:228164-228509 4.5e-09 50_[-1]_30 chrXII:656840-657154 5.2e-09 41_[+1]_39 chrIV:410226-410560 5.2e-09 33_[-1]_47 chrVII:774182-774604 5.2e-09 3_[-1]_77 chrXI:517819-518120 6.8e-09 66_[-1]_14 chrIX:174925-175203 8.7e-09 22_[-1]_58 chrXV:113652-113942 8.7e-09 60_[-1]_20 chrXIV:104657-105010 8.7e-09 27_[-1]_53 chrIV:83393-83729 8.7e-09 34_[-1]_46 chrX:59045-59328 8.7e-09 10_[+1]_70 chrIII:142610-142934 8.7e-09 31_[+1]_49 chrII:266218-266598 8.7e-09 25_[-1]_55 chrVIII:115961-116337 8.7e-09 54_[+1]_26 chrXV:353918-354276 8.7e-09 40_[+1]_40 chrVII:930867-931177 1.1e-08 33_[+1]_47 chrX:396633-396962 1.1e-08 31_[+1]_49 chrV:61761-62110 1.1e-08 57_[+1]_23 chrVI:162072-162379 1.1e-08 50_[-1]_30 chrVI:180832-181212 1.1e-08 54_[+1]_26 chrVII:845487-845874 1.1e-08 16_[-1]_64 chrXVI:860220-860568 1.1e-08 32_[-1]_48 chrIV:992689-993020 1.3e-08 25_[-1]_55 chrXI:219732-220053 1.6e-08 50_[-1]_30 chrX:197204-197476 1.6e-08 77_[+1]_3 chrXV:282008-282331 1.8e-08 42_[-1]_38 chrXIII:321047-321346 2.2e-08 55_[+1]_25 chrXVI:856752-857083 2.2e-08 32_[-1]_48 chrXV:226508-226842 4.7e-08 38_[+1]_42 chrVIII:146126-146440 7.5e-08 63_[+1]_17 chrIII:123425-123791 8.2e-08 72_[+1]_8 chrXV:594270-594573 1.1e-07 36_[+1]_44 chrV:138503-138854 1.3e-07 35_[-1]_45 chrXI:490802-491102 1.9e-07 71_[-1]_9 chrIV:619846-620193 1.9e-07 46_[+1]_34 chrXII:374203-374560 1.9e-07 29_[-1]_51 chrXV:340173-340522 1.9e-07 48_[+1]_32 chrV:492214-492588 1.9e-07 47_[+1]_33 chrX:233768-234093 1.9e-07 64_[-1]_16 chrX:374393-374738 2.2e-07 44_[+1]_36 chrXI:162349-162707 2.2e-07 62_[+1]_18 chrXIII:131710-132057 2.2e-07 45_[+1]_35 chrVII:828542-828956 2.2e-07 77_[+1]_3 chrVII:736171-736528 2.2e-07 38_[-1]_42 chrXIII:747755-748124 2.2e-07 56_[+1]_24 chrV:438562-438852 2.6e-07 48_[-1]_32 chrXIII:372324-372612 2.6e-07 74_[+1]_6 chrXIII:586542-586866 2.6e-07 29_[+1]_51 chrXV:663700-664038 2.6e-07 40_[+1]_40 chrXIII:420454-420812 2.6e-07 52_[+1]_28 chrX:378193-378529 2.6e-07 54_[-1]_26 chrV:469290-469640 2.6e-07 47_[-1]_33 chrVII:412153-412529 2.6e-07 50_[+1]_30 chrVII:823319-823679 2.6e-07 38_[-1]_42 chrXI:308035-308387 2.6e-07 30_[+1]_50 chrXIV:631759-632062 2.8e-07 39_[+1]_41 chrXII:605203-605580 6.1e-07 73_[+1]_7 chrII:326627-327030 8.1e-07 61_[+1]_19 chrXIII:808139-808485 8.1e-07 37_[+1]_43 chrIV:802588-802956 8.6e-07 62_[+1]_18 chrIV:645057-645371 9.6e-07 42_[+1]_38 chrIII:168184-168548 1e-06 38_[+1]_42 chrXVI:775670-775992 1.1e-06 37_[+1]_43 chrII:642922-643240 1.1e-06 29_[+1]_51 chrXVI:435794-436130 1.1e-06 34_[+1]_46 chrIV:1256913-1257245 1.7e-06 32_[+1]_48 chrVIII:134194-134512 1.8e-06 15_[-1]_65 chrXII:448527-448877 1.8e-06 51_[+1]_29 chrIV:520813-521158 2.9e-06 34_[-1]_46 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCMYTAAMCCACTCGSCCAW MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SCMYTAAMCCACTCGSCCAW width=20 seqs=125 chrXII:592403-592763 ( 61) GCCTTAAACCACTCGGCCAA 1 chrXII:731971-732287 ( 17) GCCTTAAACCACTCGGCCAA 1 chrX:617751-618103 ( 48) GCCTTAAACCACTCGGCCAA 1 chrII:9438-9730 ( 55) GCCTTAGACCACTCGGCCAA 1 chrXIV:726031-726370 ( 42) GCCTTAGACCACTCGGCCAA 1 chrIV:519623-519915 ( 30) GCCTTAGACCACTCGGCCAA 1 chrXI:84053-84336 ( 70) GCCTTAGACCACTCGGCCAA 1 chrII:347437-347791 ( 45) GCCTTAGACCACTCGGCCAA 1 chrXII:962871-963217 ( 36) GCCTTAGACCACTCGGCCAA 1 chrX:424312-424686 ( 41) GCCTTAGACCACTCGGCCAA 1 chrIV:980842-981184 ( 67) CGCCTTAACCACTCGGCCAA 1 chrIV:1305466-1305805 ( 51) CGCCTTAACCACTCGGCCAA 1 chrV:86436-86788 ( 48) CGCCTTAACCACTCGGCCAA 1 chrII:226937-227300 ( 13) CGCCTTAACCACTCGGCCAA 1 chrXII:167856-168180 ( 32) CGCCTTAACCACTCGGCCAA 1 chrX:523907-524261 ( 34) CGCCTTAACCACTCGGCCAA 1 chrXIII:259032-259392 ( 52) CGCCTTAACCACTCGGCCAA 1 chrIV:437616-437971 ( 35) CGCCTTAACCACTCGGCCAA 1 chrXVI:689400-689793 ( 25) CGCCTTAACCACTCGGCCAT 1 chrIX:248647-249025 ( 70) CGCCTTAACCACTCGGCCAT 1 chrIII:227778-228168 ( 25) CGCCTTAACCACTCGGCCAT 1 chrIV:1150728-1151083 ( 61) CGCCTTAACCACTCGGCCAC 1 chrVI:191468-191773 ( 18) CGCCTTAACCACTCGGCCAC 1 chrXII:784187-784553 ( 40) CGCCTTAACCACTCGGCCAC 1 chrXV:274500-274891 ( 34) CGCCTTAACCACTCGGCCAC 1 chrXV:980565-980873 ( 12) CCACTAGACCACACGCCCAT 1 chrXII:1051984-1052263 ( 46) GCCTTAACCAACTGGGCCAA 1 chrXV:464344-464633 ( 10) CCACTAGACCACACGCCCTT 1 chrV:443105-443393 ( 51) GCCTTAACCAACTGGGCCAA 1 chrXII:92394-92776 ( 11) CCACTAGACCACACGCCCTT 1 chrIX:183340-183668 ( 34) GCCTTAACCAACTGGGCCAA 1 chrXII:734641-734964 ( 56) GCCTTAACCAACTGGGCCAA 1 chrXIII:195959-196315 ( 66) CCACTAGACCACACGCCCTT 1 chrV:551166-551500 ( 50) GCCTTAACCAACTGGGCCAA 1 chrVII:738961-739319 ( 38) GCCTTAACCAACTGGGCCAA 1 chrXVI:819362-819706 ( 51) GCCTTAACCAACTGGGCCAA 1 chrIV:667862-668248 ( 50) GCCTTAACCAACTGGGCCAA 1 chrII:197335-197621 ( 72) GCCTTAACCAACTGGGCCAA 1 chrXVI:880179-880543 ( 33) GCCTTAACCAACTGGGCCAA 1 chrXIV:568020-568240 ( 33) CCACTAGACCACACGCCCGA 1 chrXI:458446-458764 ( 8) GCCTTAGACCGCTCGGCCAA 1 chrVII:857278-857653 ( 51) GCCTTAGACCGCTCGGCCAA 1 chrVII:422926-423310 ( 30) GCCTTAGACCGCTCGGCCAA 1 chrVI:101224-101554 ( 35) CCACTAGACCACACGCCCGA 1 chrVII:205361-205737 ( 28) GCCTTAGACCGCTCGGCCAA 1 chrXV:300934-301318 ( 19) CCACTAGACCACACGCCCGA 1 chrXII:628219-628623 ( 18) GCCTTAGACCGCTCGGCCAA 1 chrXIV:442835-443224 ( 33) GCCTTAGACCGCTCGGCCAA 1 chrI:138995-139360 ( 23) CCACTAGACCACACGCCCGT 1 chrXII:975886-976187 ( 45) GCCTTAACCAACTTGGCCAT 1 chrXVI:810555-810833 ( 38) GCCTTAACCAACTTGGCCAT 1 chrVII:730990-731331 ( 33) GCCTTAACCAACTTGGCCAT 1 chrVI:137328-137700 ( 70) GCCTTAACCAACTTGGCCAT 1 chrXI:74465-74806 ( 45) GCCTTAACCAACTTGGCCAT 1 chrXIV:102557-102950 ( 19) GCCTTAACCAACTTGGCCAT 1 chrIII:127560-127872 ( 56) GCCTTAACCAACTTGGCCAT 1 chrXIV:632444-632795 ( 36) GCCTTAACCAACTTGGCCAT 1 chrXV:228164-228509 ( 51) GCCTTAACCAACTTGGCCAT 1 chrXII:656840-657154 ( 42) CGACTACGCCACACGCCCAA 1 chrIV:410226-410560 ( 34) CGACTACGCCACACGCCCAA 1 chrVII:774182-774604 ( 4) CGACTACGCCACACGCCCAA 1 chrXI:517819-518120 ( 67) CGACTACGCCACACGCCCAT 1 chrIX:174925-175203 ( 23) CGCCTTACCAACTTGGCCAT 1 chrXV:113652-113942 ( 61) CGCCTTACCAACTTGGCCAT 1 chrXIV:104657-105010 ( 28) CGCCTTACCAACTTGGCCAT 1 chrIV:83393-83729 ( 35) CCACTAAACCACTTGCGCTA 1 chrX:59045-59328 ( 11) CGCCTTACCAACTTGGCCAT 1 chrIII:142610-142934 ( 32) CCACTAAACCACTTGCGCTA 1 chrII:266218-266598 ( 26) CGCCTTACCAACTTGGCCAT 1 chrVIII:115961-116337 ( 55) CGCCTTACCAACTTGGCCAT 1 chrXV:353918-354276 ( 41) CGCCTTACCAACTTGGCCAT 1 chrVII:930867-931177 ( 34) CCACTAAACCACTTGCGCTT 1 chrX:396633-396962 ( 32) CCACTAAACCACTTGCGCTT 1 chrV:61761-62110 ( 58) CCACTAAACCACTTGCGCTT 1 chrVI:162072-162379 ( 51) CCACTAAACCACTTGCGCTT 1 chrVI:180832-181212 ( 55) CCACTAAACCACTTGCGCTT 1 chrVII:845487-845874 ( 17) CCACTAAACCACTTGCGCTT 1 chrXVI:860220-860568 ( 33) CCACTAAACCACTTGCGCTT 1 chrIV:992689-993020 ( 26) CCACTAAACCACTTGCGCTC 1 chrXI:219732-220053 ( 51) CGACTACGCCACACGCCCTA 1 chrX:197204-197476 ( 78) CGACTACGCCACACGCCCTA 1 chrXV:282008-282331 ( 43) CCACTAAACCACTTGCGCGC 1 chrXIII:321047-321346 ( 56) CGACTACGCCACACGCCCGA 1 chrXVI:856752-857083 ( 33) CGACTACGCCACACGCCCGA 1 chrXV:226508-226842 ( 39) CCACTAAACCACTTGCGCTG 1 chrVIII:146126-146440 ( 64) CGACTACGCCACACGCCCTG 1 chrIII:123425-123791 ( 73) CCTCTAGACCACACGCCCTC 1 chrXV:594270-594573 ( 37) CCACTGAACCACTTGCGCGT 1 chrV:138503-138854 ( 36) CCATTACGCCACGCGAGCAT 1 chrXI:490802-491102 ( 72) CGCCGTGACCATTGGGCCAC 1 chrIV:619846-620193 ( 47) CGCCGTGACCATTGGGCCAC 1 chrXII:374203-374560 ( 30) CGCCGTGACCATTGGGCCAC 1 chrXV:340173-340522 ( 49) CGCCGTGACCATTGGGCCAC 1 chrV:492214-492588 ( 48) CGCCGTGACCATTGGGCCAC 1 chrX:233768-234093 ( 65) CGCCGTGACCATTGGGCCAC 1 chrX:374393-374738 ( 45) CCATTACGCCACGCGAGCTA 1 chrXI:162349-162707 ( 63) CCATTACGCCACGCGAGCTA 1 chrXIII:131710-132057 ( 46) CCATTACGCCACGCGAGCTA 1 chrVII:828542-828956 ( 78) CCATTACGCCACGCGAGCTA 1 chrVII:736171-736528 ( 39) CCATTACGCCACGCGAGCTA 1 chrXIII:747755-748124 ( 57) CCATTACGCCACGCGAGCTA 1 chrV:438562-438852 ( 49) GCCATAACCGACTAGACCAC 1 chrXIII:372324-372612 ( 75) GCCATAACCGACTAGACCAC 1 chrXIII:586542-586866 ( 30) GCCATAACCGACTAGACCAC 1 chrXV:663700-664038 ( 41) GCCATAACCGACTAGACCAC 1 chrXIII:420454-420812 ( 53) GCCATAACCGACTAGACCAC 1 chrX:378193-378529 ( 55) GCCATAACCGACTAGACCAC 1 chrV:469290-469640 ( 48) GCCATAACCGACTAGACCAC 1 chrVII:412153-412529 ( 51) GCCATAACCGACTAGACCAC 1 chrVII:823319-823679 ( 39) GCCATAACCGACTAGACCAC 1 chrXI:308035-308387 ( 31) GCCATAACCGACTAGACCAC 1 chrXIV:631759-632062 ( 40) CCTCTAGACCACACGCCCGG 1 chrXII:605203-605580 ( 74) CCACTGAGCTACACGAGCAT 1 chrII:326627-327030 ( 62) GTCTTGAACCACTGGACCAT 1 chrXIII:808139-808485 ( 38) CCACTACACTATAGGACCTT 1 chrIV:802588-802956 ( 63) CCACTACACTATAGGACCGA 1 chrIV:645057-645371 ( 43) CCACTACACTATAGGACCGT 1 chrIII:168184-168548 ( 39) CCACTACACTATAGGACCAG 1 chrXVI:775670-775992 ( 38) CCACTGCGCCATACGAGCTT 1 chrII:642922-643240 ( 30) CCACTGCGCCATACGAGCTT 1 chrXVI:435794-436130 ( 35) CCACTGCGCCATACGAGCTT 1 chrIV:1256913-1257245 ( 33) CCACTGAACCACTTTCGCTA 1 chrVIII:134194-134512 ( 16) CCACTACACTATAGGACCGG 1 chrXII:448527-448877 ( 52) CCACTACACTATAGGACCGG 1 chrIV:520813-521158 ( 35) CCACTACACTATAGGACCCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCMYTAAMCCACTCGSCCAW MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 38138 bayes= 9.9772 E= 1.5e-415 -1361 172 94 -1361 -1361 186 63 -526 35 163 -1361 -427 -195 159 -1361 16 -1361 -1361 -200 163 122 -1361 -178 -46 86 12 27 -1361 84 59 -26 -1361 -1361 238 -1361 -1361 -57 176 -126 -227 163 -1361 -200 -1361 -1361 218 -1361 -127 -36 -1361 -178 119 -195 135 0 -36 -1361 -1361 237 -526 -41 46 139 -1361 -1361 206 6 -1361 -1361 238 -1361 -1361 109 -458 -88 -41 49 -6 -200 12 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCMYTAAMCCACTCGSCCAW MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 125 E= 1.5e-415 0.000000 0.632000 0.368000 0.000000 0.000000 0.696000 0.296000 0.008000 0.392000 0.592000 0.000000 0.016000 0.080000 0.576000 0.000000 0.344000 0.000000 0.000000 0.048000 0.952000 0.720000 0.000000 0.056000 0.224000 0.560000 0.208000 0.232000 0.000000 0.552000 0.288000 0.160000 0.000000 0.000000 1.000000 0.000000 0.000000 0.208000 0.648000 0.080000 0.064000 0.952000 0.000000 0.048000 0.000000 0.000000 0.872000 0.000000 0.128000 0.240000 0.000000 0.056000 0.704000 0.080000 0.488000 0.192000 0.240000 0.000000 0.000000 0.992000 0.008000 0.232000 0.264000 0.504000 0.000000 0.000000 0.800000 0.200000 0.000000 0.000000 1.000000 0.000000 0.000000 0.656000 0.008000 0.104000 0.232000 0.432000 0.184000 0.048000 0.336000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCMYTAAMCCACTCGSCCAW MEME-1 regular expression -------------------------------------------------------------------------------- [CG][CG][CA][CT]T[AT][AGC][AC]C[CA]AC[TA][CT]G[GCA][CG]C[AT][AT] -------------------------------------------------------------------------------- Time 208.43 secs. ******************************************************************************** ******************************************************************************** MOTIF RAGRTCMBSGGTTCGAYYCCS MEME-2 width = 21 sites = 128 llr = 2089 E-value = 2.3e-439 ******************************************************************************** -------------------------------------------------------------------------------- Motif RAGRTCMBSGGTTCGAYYCCS MEME-2 Description -------------------------------------------------------------------------------- Simplified A 46142:3:12::::2a2:::: pos.-specific C :12118444::::a::24a75 probability G 53751:2358a:::8:2:::4 matrix T 1:::62131::aa:::46:31 bits 2.4 * * * 2.1 * * * 1.9 * * * 1.7 * ** * * Relative 1.4 * ****** * Entropy 1.2 * ******* ** (23.5 bits) 1.0 * * ******* *** 0.7 ** * ******** **** 0.5 **** *********** **** 0.2 **************** **** 0.0 --------------------- Multilevel GAGGTCCCGGGTTCGATTCCC consensus AG A TATC A CC TG sequence GG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCMBSGGTTCGAYYCCS MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrIII:123425-123791 - 29 2.07e-13 TAGGGTGCGG GAGGTCCCGGGTTCGAGTCCC GGCTCGCCCC chrI:166136-166493 + 45 2.92e-11 TTGCAAGGAA GAGGTCATCGGTTCGATTCCG GTTGCGTCCA chrV:311799-312248 - 60 2.92e-11 TTGCAAGGAA GAGGTCATCGGTTCGATTCCG GTTGCGTCCA chrIX:210636-210844 + 18 1.17e-10 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGACCA chrXIV:569773-569984 - 49 1.17e-10 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGACCA chrXII:1051984-1052263 - 8 1.17e-10 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGA chrV:443105-443393 - 13 1.17e-10 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGACCA chrV:551166-551500 - 12 1.17e-10 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGACCA chrVII:738961-739319 + 75 1.17e-10 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGA chrIV:667862-668248 - 12 1.17e-10 TAATAACGCG GGGATCAGCGGTTCGATCCCG CTAGAGACCA chrXIII:768269-768461 - 64 1.40e-10 TAGCATGGGA GAGGTCTCCGGTTCGATTCCG GACTCGTCCA chrX:197204-197476 - 33 1.40e-10 TAGCATGGGA GAGGTCTCCGGTTCGATTCCG GACTCGTCCA chrVIII:146126-146440 - 19 1.40e-10 TAGCATGGGA GAGGTCTCCGGTTCGATTCCG GACTCGTCCA chrXIII:321047-321346 - 11 1.40e-10 TAGCATGGGA GAGGTCTCCGGTTCGATTCCG GACTCGTCCA chrXVI:856752-857083 + 77 1.40e-10 TAGCATGGGA GAGGTCTCCGGTTCGATTCCG GAC chrIV:410226-410560 + 78 1.40e-10 TAGCATGGGA GAGGTCTCCGGTTCGATTCCG GA chrVII:774182-774604 + 48 1.40e-10 TAGCATGGGA GAGGTCTCCGGTTCGATTCCG GACTCGTCCA chrVII:185599-185921 - 14 3.89e-10 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrIV:1352288-1352664 - 50 3.89e-10 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrVII:122118-122528 + 38 3.89e-10 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrV:135292-135640 - 19 3.89e-10 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrIII:151172-151514 - 1 3.89e-10 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC chrXVI:581904-582266 + 69 3.89e-10 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrIX:300127-300445 - 2 3.89e-10 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC C chrIV:1201594-1201943 + 74 3.89e-10 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCC CTACAG chrVIII:388754-389024 - 64 4.58e-10 AAGCATGCGA GAGGCCCTGGGTTCAATTCCC AGCTCGCCCC chrXIV:547059-547337 + 18 4.58e-10 AAGCATGCGA GAGGCCCTGGGTTCAATTCCC AGCTCGCCCC chrXV:110867-111154 - 12 4.58e-10 CTTCCAAGGT GGGGACACGGGTTCGATTCTC GTACCGCTCA chrVII:779452-779829 + 67 4.58e-10 CTTCCAAGGT GGGGACACGGGTTCGATTCTC GTACCGCTCA chrXIV:96091-96477 - 17 4.58e-10 CTTCCAAGGT GGGGACACGGGTTCGATTCTC GTACCGCTCA chrVIII:475560-475924 - 24 5.33e-10 TCACACGGCA AAGGTCCCGAGTTCGATCCTC GGTTGGAACA chrIV:1075329-1075708 - 14 5.33e-10 TCACACGGCA AAGGTCCCGAGTTCGATCCTC GGTTGGAACA chrVII:401447-401632 - 48 7.26e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTATCGGAG chrVII:328427-328822 + 50 7.26e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTATCGGAG chrIV:1017056-1017441 - 19 7.26e-10 TTCTCACCGT GGAGACCGGGGTTCGACTCCC CGCTTCGGAG chrV:176938-177386 + 28 7.26e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTATCGGAG chrV:487229-487549 - 2 7.26e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC C chrVII:541695-542097 + 45 7.26e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTATCGGAG chrXIII:290644-290987 + 77 7.26e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGT chrV:354771-355231 + 24 7.26e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCC CGTATCGGAG chrXIII:183803-183990 - 62 8.42e-10 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrIV:992689-993020 + 68 8.42e-10 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrXVI:572141-572538 + 20 8.42e-10 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrV:61761-62110 - 15 8.42e-10 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrIV:83393-83729 + 77 8.42e-10 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGC chrVI:180832-181212 - 12 8.42e-10 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrVII:845487-845874 + 59 8.42e-10 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrX:531659-532167 + 5 8.42e-10 TCGT TGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrXVI:860220-860568 + 75 8.42e-10 TTGCCATCGT TGGGCCCCCGGTTCGATTCCG GGCTT chrVII:405413-405694 + 8 1.72e-09 TAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrX:374393-374738 - 1 1.72e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC chrXI:162349-162707 - 19 1.72e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrIV:568734-569134 + 39 1.72e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrXIII:131710-132057 - 2 1.72e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC A chrVII:828542-828956 - 34 1.72e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrII:405719-406145 + 37 1.72e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrX:355195-355654 + 41 1.72e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrXIII:747755-748124 - 13 1.72e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC ATCGTGAGTG chrV:138503-138854 + 79 1.72e-09 TTCTAATCAG AAGATTATGGGTTCGACCCCC A chrVIII:134194-134512 + 59 2.27e-09 TTTTGATCCG GACAACCCCGGTTCGAATCCG GGTAGGACCT chrIV:802588-802956 - 19 2.27e-09 TTTTGATCCG GACAACCCCGGTTCGAATCCG GGTAGGACCT chrXII:448527-448877 - 8 2.27e-09 TTTTGATCCG GACAACCCCGGTTCGAATCCG GGTAGGA chrIV:520813-521158 + 78 2.27e-09 TTTTGATCCG GACAACCCCGGTTCGAATCCG GG chrXV:438487-438870 + 80 2.59e-09 AGGATACCGA AATGTCAGGGGTTCGAGCCCC chrXI:578797-579220 + 72 2.59e-09 AGGATACCGA AATGTCAGGGGTTCGAGCCCC CTATGAGG chrIX:174925-175203 + 59 4.35e-09 TAGTAATGTG GAGATCATCGGTTCAAATCCG ATTGGAAGCA chrXIV:104657-105010 + 64 4.35e-09 TAGTAATGTG GAGATCATCGGTTCAAATCCG ATTGGAAGCA chrIII:295307-295777 + 34 4.35e-09 TAGTAATGTG GAGATCATCGGTTCAAATCCG ATTGGAAGCA chrIV:434089-434450 - 55 4.35e-09 TAGTAATGTG GAGATCATCGGTTCAAATCCG ATTGGAAGCA chrX:538414-538740 + 69 4.35e-09 TCCTAAGGAG AAGACTGCGGGTTCGAGTCCC GTACGGAACG chrII:266218-266598 + 62 4.35e-09 TAGTAATGTG GAGATCATCGGTTCAAATCCG ATTGGAAGCA chrVIII:115961-116337 - 18 4.35e-09 TAGTAATGTG GAGATCATCGGTTCAAATCCG ATTGGAAGCA chrXV:353918-354276 - 4 4.35e-09 TAGTAATGTG GAGATCATCGGTTCAAATCCG ATT chrIV:488552-489034 - 64 4.93e-09 TTACACGGCG AAGATCCCGAGTTCGAACCTC GGTTGGATCA chrII:326627-327030 - 24 4.93e-09 TTACACGGCG AAGATCCCGAGTTCGAACCTC GGTTGGATCA chrXI:379654-379879 + 7 7.08e-09 ACGCAG AACGTCCCCAGTTCGATCCTG GGCGAAATCA chrXIII:372324-372612 - 37 7.08e-09 TAACACGCAG AACGTCCCCAGTTCGATCCTG GGCGAAATCA chrXV:663700-664038 - 3 7.08e-09 TAACACGCAG AACGTCCCCAGTTCGATCCTG GG chrXIII:420454-420812 - 15 7.08e-09 TAACACGCAG AACGTCCCCAGTTCGATCCTG GGCGAAATCA chrVII:412153-412529 - 13 7.08e-09 TAACACGCAG AACGTCCCCAGTTCGATCCTG GGCGAAATCA chrVII:823319-823679 + 76 7.08e-09 TAACACGCAG AACGTCCCCAGTTCGATCCTG GGCG chrXV:487409-487615 + 20 5.32e-08 TGTTAATCGC AAGATCGTGAGTTCAACCCTC ACTGGGGTCG chrXII:975886-976187 - 7 5.32e-08 TGTTAATCGC AAGATCGTGAGTTCAACCCTC ACTGGG chrXVI:810555-810833 + 75 5.32e-08 TGTTAATCGC AAGATCGTGAGTTCAACCCTC ACTGG chrVII:730990-731331 + 70 5.32e-08 TGTTAATCGC AAGATCGTGAGTTCAACCCTC ACTGGGGTCG chrVI:137328-137700 - 32 5.32e-08 TGTTAATCGC AAGATCGTGAGTTCAACCCTC ACTGGGGTCG chrXIV:102557-102950 + 56 5.32e-08 TGTTAATCGC AAGATCGTGAGTTCAACCCTC ACTGGGGTCG chrXIV:632444-632795 + 73 5.32e-08 TGTTAATCGC AAGATCGTGAGTTCAACCCTC ACTGGGG chrXII:818500-818779 + 61 7.02e-08 TTCCGGTGGC TGTGATCCGGGTTCGAGTCCC GGGAGGAGCT chrXV:976347-976597 + 41 7.02e-08 TCATAATCTG AAGGTCGAGAGTTCGAACCTC CCCTGGAGCA chrIV:1095222-1095615 - 12 7.02e-08 AAGATATCTG GAGGTCCTGTGTTCGATCCAC AGAGTTCGCA chrIV:1175707-1176021 + 57 7.02e-08 TCATAATCTG AAGGTCGAGAGTTCGAACCTC CCCTGGAGCA chrVII:440558-440975 - 10 7.02e-08 AAGTTATCTG GAGGTCCTGTGTTCGATCCAC AGAATTCGC chrX:390920-391281 - 3 7.02e-08 TCATAATCTG AAGGTCGAGAGTTCGAACCTC CC chrXVI:622400-622797 - 2 7.02e-08 AAGTTATCTG GAGGTCCTGTGTTCGATCCAC A chrXIII:572771-573108 - 4 7.02e-08 TCATAATCTG AAGGTCGAGAGTTCGAACCTC CCC chrXVI:55953-56439 - 33 1.19e-07 TTGCAATCGA AGGGTTGCAGGTTCAATTCCT GTCCGTTTCA chrIV:619846-620193 - 10 1.41e-07 TACGAACCAG AAGATTCCAGGTTCAAGTCCT GGCGGGGAA chrXII:374203-374560 + 66 1.41e-07 TACGAACCAG AAGATTCCAGGTTCAAGTCCT GGCGGGGAAG chrXV:340173-340522 - 12 1.41e-07 TACGAACCAG AAGATTCCAGGTTCAAGTCCT GGCGGGGAAG chrV:492214-492588 - 11 1.41e-07 TACGAACCAG AAGATTCCAGGTTCAAGTCCT GGCGGGGAAG chrXIII:168666-169044 + 48 1.96e-07 ACGAAATCTT GAGATCGGGCGTTCGACTCGC CCCCGGGAGA chrIV:946136-946549 + 78 1.96e-07 ACGAAATCTT GAGATCGGGCGTTCGACTCGC CC chrVII:1004067-1004392 + 78 2.12e-07 TTGTAATGCA AAGGTCGTTAGTTCAATTCTG AC chrXVI:744119-744473 + 79 2.12e-07 TTGTAATGCA AAGGTCGTTAGTTCAATTCTG A chrIX:324205-324396 - 63 3.35e-07 TTGTCGCGTG CCAGATCGGGGTTCAATTCCC CGTCGCGGAG chrX:541407-541688 + 52 3.35e-07 TTGTCGCGTG CCAGATCGGGGTTCAATTCCC CGTCGCGGAG chrXIII:463401-463770 + 60 3.35e-07 TTGTCGCGTG CCAGATCGGGGTTCAATTCCC CGTCGCGGAG chrX:204561-204940 + 76 3.35e-07 TTGTCGCGTG CCAGATCGGGGTTCAATTCCC CGTC chrVII:544452-544818 - 2 3.35e-07 TTGTCGCGTG CCAGATCGGGGTTCAATTCCC C chrVIII:132948-133131 - 47 5.90e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT GCAGTTGTCG chrVII:561544-561762 - 69 5.90e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT GCAGTTGTCG chrI:182401-182635 - 64 5.90e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT GCAGTTGTCG chrIV:980842-981184 - 21 5.90e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT GCAGTTGTCG chrII:226937-227300 + 58 5.90e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT GCAGTTGTCG chrXIII:259032-259392 - 6 5.90e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT GCAGT chrIV:437616-437971 + 80 5.90e-07 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCT chrVII:706982-707235 - 60 9.90e-07 TGCAAATCTG TTGGTCCTTAGTTCGATCCTG AGTGCGAGCT chrXV:710088-710339 + 79 9.90e-07 TCATAACCCT GATGTCCTCGGATCGAAACCG A chrX:517697-518031 - 9 9.90e-07 TCATAACCCT GATGTCCTCGGATCGAAACCG AGCGGCGC chrIII:149757-150121 + 72 9.90e-07 TCATAACCCT GATGTCCTCGGATCGAAACCG AGCGGCGC chrV:207336-207514 + 23 1.78e-06 TTGTGGCCGA TGAAACCCTGGTTCGATTCTA GGAGATGGCA chrVII:319735-319985 + 12 1.78e-06 TTGTGGCCGA TGAAACCCTGGTTCGATTCTA GGAGATGGCA chrVII:110400-110813 - 79 1.78e-06 A TGAAACCCTGGTTCGATTCTA GGAGATGGCA chrXIII:362906-363249 + 78 1.78e-06 TTGTGGCCGA TGAAACCCTGGTTCGATTCTA GG chrIV:519623-519915 + 77 1.88e-06 TTGGACGGTT GTCCGCGCGAGTTCGAACCTC GCA chrXVI:689400-689793 + 70 2.21e-06 GTTGGGCTCT GCCCGCGCTGGTTCAAATCCT GCTGGTGTCG chrV:288244-288680 - 41 2.21e-06 GTTGGGCTCT GCCCGCGCTGGTTCAAATCCT GCTGGTGTCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCMBSGGTTCGAYYCCS MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:123425-123791 2.1e-13 28_[-2]_51 chrI:166136-166493 2.9e-11 44_[+2]_35 chrV:311799-312248 2.9e-11 59_[-2]_20 chrIX:210636-210844 1.2e-10 17_[+2]_62 chrXIV:569773-569984 1.2e-10 48_[-2]_31 chrXII:1051984-1052263 1.2e-10 7_[-2]_72 chrV:443105-443393 1.2e-10 12_[-2]_67 chrV:551166-551500 1.2e-10 11_[-2]_68 chrVII:738961-739319 1.2e-10 74_[+2]_5 chrIV:667862-668248 1.2e-10 11_[-2]_68 chrXIII:768269-768461 1.4e-10 63_[-2]_16 chrX:197204-197476 1.4e-10 32_[-2]_47 chrVIII:146126-146440 1.4e-10 18_[-2]_61 chrXIII:321047-321346 1.4e-10 10_[-2]_69 chrXVI:856752-857083 1.4e-10 76_[+2]_3 chrIV:410226-410560 1.4e-10 77_[+2]_2 chrVII:774182-774604 1.4e-10 47_[+2]_32 chrVII:185599-185921 3.9e-10 13_[-2]_66 chrIV:1352288-1352664 3.9e-10 49_[-2]_30 chrVII:122118-122528 3.9e-10 37_[+2]_42 chrV:135292-135640 3.9e-10 18_[-2]_61 chrIII:151172-151514 3.9e-10 [-2]_79 chrXVI:581904-582266 3.9e-10 68_[+2]_11 chrIX:300127-300445 3.9e-10 1_[-2]_78 chrIV:1201594-1201943 3.9e-10 73_[+2]_6 chrVIII:388754-389024 4.6e-10 63_[-2]_16 chrXIV:547059-547337 4.6e-10 17_[+2]_62 chrXV:110867-111154 4.6e-10 11_[-2]_68 chrVII:779452-779829 4.6e-10 66_[+2]_13 chrXIV:96091-96477 4.6e-10 16_[-2]_63 chrVIII:475560-475924 5.3e-10 23_[-2]_56 chrIV:1075329-1075708 5.3e-10 13_[-2]_66 chrVII:401447-401632 7.3e-10 47_[-2]_32 chrVII:328427-328822 7.3e-10 49_[+2]_30 chrIV:1017056-1017441 7.3e-10 18_[-2]_61 chrV:176938-177386 7.3e-10 27_[+2]_52 chrV:487229-487549 7.3e-10 1_[-2]_78 chrVII:541695-542097 7.3e-10 44_[+2]_35 chrXIII:290644-290987 7.3e-10 76_[+2]_3 chrV:354771-355231 7.3e-10 23_[+2]_56 chrXIII:183803-183990 8.4e-10 61_[-2]_18 chrIV:992689-993020 8.4e-10 67_[+2]_12 chrXVI:572141-572538 8.4e-10 19_[+2]_60 chrV:61761-62110 8.4e-10 14_[-2]_65 chrIV:83393-83729 8.4e-10 76_[+2]_3 chrVI:180832-181212 8.4e-10 11_[-2]_68 chrVII:845487-845874 8.4e-10 58_[+2]_21 chrX:531659-532167 8.4e-10 4_[+2]_75 chrXVI:860220-860568 8.4e-10 74_[+2]_5 chrVII:405413-405694 1.7e-09 7_[+2]_72 chrX:374393-374738 1.7e-09 [-2]_79 chrXI:162349-162707 1.7e-09 18_[-2]_61 chrIV:568734-569134 1.7e-09 38_[+2]_41 chrXIII:131710-132057 1.7e-09 1_[-2]_78 chrVII:828542-828956 1.7e-09 33_[-2]_46 chrII:405719-406145 1.7e-09 36_[+2]_43 chrX:355195-355654 1.7e-09 40_[+2]_39 chrXIII:747755-748124 1.7e-09 12_[-2]_67 chrV:138503-138854 1.7e-09 78_[+2]_1 chrVIII:134194-134512 2.3e-09 58_[+2]_21 chrIV:802588-802956 2.3e-09 18_[-2]_61 chrXII:448527-448877 2.3e-09 7_[-2]_72 chrIV:520813-521158 2.3e-09 77_[+2]_2 chrXV:438487-438870 2.6e-09 79_[+2] chrXI:578797-579220 2.6e-09 71_[+2]_8 chrIX:174925-175203 4.3e-09 58_[+2]_21 chrXIV:104657-105010 4.3e-09 63_[+2]_16 chrIII:295307-295777 4.3e-09 33_[+2]_46 chrIV:434089-434450 4.3e-09 54_[-2]_25 chrX:538414-538740 4.3e-09 68_[+2]_11 chrII:266218-266598 4.3e-09 61_[+2]_18 chrVIII:115961-116337 4.3e-09 17_[-2]_62 chrXV:353918-354276 4.3e-09 3_[-2]_76 chrIV:488552-489034 4.9e-09 63_[-2]_16 chrII:326627-327030 4.9e-09 23_[-2]_56 chrXI:379654-379879 7.1e-09 6_[+2]_73 chrXIII:372324-372612 7.1e-09 36_[-2]_43 chrXV:663700-664038 7.1e-09 2_[-2]_77 chrXIII:420454-420812 7.1e-09 14_[-2]_65 chrVII:412153-412529 7.1e-09 12_[-2]_67 chrVII:823319-823679 7.1e-09 75_[+2]_4 chrXV:487409-487615 5.3e-08 19_[+2]_60 chrXII:975886-976187 5.3e-08 6_[-2]_73 chrXVI:810555-810833 5.3e-08 74_[+2]_5 chrVII:730990-731331 5.3e-08 69_[+2]_10 chrVI:137328-137700 5.3e-08 31_[-2]_48 chrXIV:102557-102950 5.3e-08 55_[+2]_24 chrXIV:632444-632795 5.3e-08 72_[+2]_7 chrXII:818500-818779 7e-08 60_[+2]_19 chrXV:976347-976597 7e-08 40_[+2]_39 chrIV:1095222-1095615 7e-08 11_[-2]_68 chrIV:1175707-1176021 7e-08 56_[+2]_23 chrVII:440558-440975 7e-08 9_[-2]_70 chrX:390920-391281 7e-08 2_[-2]_77 chrXVI:622400-622797 7e-08 1_[-2]_78 chrXIII:572771-573108 7e-08 3_[-2]_76 chrXVI:55953-56439 1.2e-07 32_[-2]_47 chrIV:619846-620193 1.4e-07 9_[-2]_70 chrXII:374203-374560 1.4e-07 65_[+2]_14 chrXV:340173-340522 1.4e-07 11_[-2]_68 chrV:492214-492588 1.4e-07 10_[-2]_69 chrXIII:168666-169044 2e-07 47_[+2]_32 chrIV:946136-946549 2e-07 77_[+2]_2 chrVII:1004067-1004392 2.1e-07 77_[+2]_2 chrXVI:744119-744473 2.1e-07 78_[+2]_1 chrIX:324205-324396 3.3e-07 62_[-2]_17 chrX:541407-541688 3.3e-07 51_[+2]_28 chrXIII:463401-463770 3.3e-07 59_[+2]_20 chrX:204561-204940 3.3e-07 75_[+2]_4 chrVII:544452-544818 3.3e-07 1_[-2]_78 chrVIII:132948-133131 5.9e-07 46_[-2]_33 chrVII:561544-561762 5.9e-07 68_[-2]_11 chrI:182401-182635 5.9e-07 63_[-2]_16 chrIV:980842-981184 5.9e-07 20_[-2]_59 chrII:226937-227300 5.9e-07 57_[+2]_22 chrXIII:259032-259392 5.9e-07 5_[-2]_74 chrIV:437616-437971 5.9e-07 79_[+2] chrVII:706982-707235 9.9e-07 59_[-2]_20 chrXV:710088-710339 9.9e-07 78_[+2]_1 chrX:517697-518031 9.9e-07 8_[-2]_71 chrIII:149757-150121 9.9e-07 71_[+2]_8 chrV:207336-207514 1.8e-06 22_[+2]_57 chrVII:319735-319985 1.8e-06 11_[+2]_68 chrVII:110400-110813 1.8e-06 78_[-2]_1 chrXIII:362906-363249 1.8e-06 77_[+2]_2 chrIV:519623-519915 1.9e-06 76_[+2]_3 chrXVI:689400-689793 2.2e-06 69_[+2]_10 chrV:288244-288680 2.2e-06 40_[-2]_39 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCMBSGGTTCGAYYCCS MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RAGRTCMBSGGTTCGAYYCCS width=21 seqs=128 chrIII:123425-123791 ( 29) GAGGTCCCGGGTTCGAGTCCC 1 chrI:166136-166493 ( 45) GAGGTCATCGGTTCGATTCCG 1 chrV:311799-312248 ( 60) GAGGTCATCGGTTCGATTCCG 1 chrIX:210636-210844 ( 18) GGGATCAGCGGTTCGATCCCG 1 chrXIV:569773-569984 ( 49) GGGATCAGCGGTTCGATCCCG 1 chrXII:1051984-1052263 ( 8) GGGATCAGCGGTTCGATCCCG 1 chrV:443105-443393 ( 13) GGGATCAGCGGTTCGATCCCG 1 chrV:551166-551500 ( 12) GGGATCAGCGGTTCGATCCCG 1 chrVII:738961-739319 ( 75) GGGATCAGCGGTTCGATCCCG 1 chrIV:667862-668248 ( 12) GGGATCAGCGGTTCGATCCCG 1 chrXIII:768269-768461 ( 64) GAGGTCTCCGGTTCGATTCCG 1 chrX:197204-197476 ( 33) GAGGTCTCCGGTTCGATTCCG 1 chrVIII:146126-146440 ( 19) GAGGTCTCCGGTTCGATTCCG 1 chrXIII:321047-321346 ( 11) GAGGTCTCCGGTTCGATTCCG 1 chrXVI:856752-857083 ( 77) GAGGTCTCCGGTTCGATTCCG 1 chrIV:410226-410560 ( 78) GAGGTCTCCGGTTCGATTCCG 1 chrVII:774182-774604 ( 48) GAGGTCTCCGGTTCGATTCCG 1 chrVII:185599-185921 ( 14) AAGGTTAGGGGTTCGAGCCCC 1 chrIV:1352288-1352664 ( 50) AAGGTTAGGGGTTCGAGCCCC 1 chrVII:122118-122528 ( 38) AAGGTTAGGGGTTCGAGCCCC 1 chrV:135292-135640 ( 19) AAGGTTAGGGGTTCGAGCCCC 1 chrIII:151172-151514 ( 1) AAGGTTAGGGGTTCGAGCCCC 1 chrXVI:581904-582266 ( 69) AAGGTTAGGGGTTCGAGCCCC 1 chrIX:300127-300445 ( 2) AAGGTTAGGGGTTCGAGCCCC 1 chrIV:1201594-1201943 ( 74) AAGGTTAGGGGTTCGAGCCCC 1 chrVIII:388754-389024 ( 64) GAGGCCCTGGGTTCAATTCCC 1 chrXIV:547059-547337 ( 18) GAGGCCCTGGGTTCAATTCCC 1 chrXV:110867-111154 ( 12) GGGGACACGGGTTCGATTCTC 1 chrVII:779452-779829 ( 67) GGGGACACGGGTTCGATTCTC 1 chrXIV:96091-96477 ( 17) GGGGACACGGGTTCGATTCTC 1 chrVIII:475560-475924 ( 24) AAGGTCCCGAGTTCGATCCTC 1 chrIV:1075329-1075708 ( 14) AAGGTCCCGAGTTCGATCCTC 1 chrVII:401447-401632 ( 48) GGAGACCGGGGTTCGACTCCC 1 chrVII:328427-328822 ( 50) GGAGACCGGGGTTCGACTCCC 1 chrIV:1017056-1017441 ( 19) GGAGACCGGGGTTCGACTCCC 1 chrV:176938-177386 ( 28) GGAGACCGGGGTTCGACTCCC 1 chrV:487229-487549 ( 2) GGAGACCGGGGTTCGACTCCC 1 chrVII:541695-542097 ( 45) GGAGACCGGGGTTCGACTCCC 1 chrXIII:290644-290987 ( 77) GGAGACCGGGGTTCGACTCCC 1 chrV:354771-355231 ( 24) GGAGACCGGGGTTCGACTCCC 1 chrXIII:183803-183990 ( 62) TGGGCCCCCGGTTCGATTCCG 1 chrIV:992689-993020 ( 68) TGGGCCCCCGGTTCGATTCCG 1 chrXVI:572141-572538 ( 20) TGGGCCCCCGGTTCGATTCCG 1 chrV:61761-62110 ( 15) TGGGCCCCCGGTTCGATTCCG 1 chrIV:83393-83729 ( 77) TGGGCCCCCGGTTCGATTCCG 1 chrVI:180832-181212 ( 12) TGGGCCCCCGGTTCGATTCCG 1 chrVII:845487-845874 ( 59) TGGGCCCCCGGTTCGATTCCG 1 chrX:531659-532167 ( 5) TGGGCCCCCGGTTCGATTCCG 1 chrXVI:860220-860568 ( 75) TGGGCCCCCGGTTCGATTCCG 1 chrVII:405413-405694 ( 8) AAGATTATGGGTTCGACCCCC 1 chrX:374393-374738 ( 1) AAGATTATGGGTTCGACCCCC 1 chrXI:162349-162707 ( 19) AAGATTATGGGTTCGACCCCC 1 chrIV:568734-569134 ( 39) AAGATTATGGGTTCGACCCCC 1 chrXIII:131710-132057 ( 2) AAGATTATGGGTTCGACCCCC 1 chrVII:828542-828956 ( 34) AAGATTATGGGTTCGACCCCC 1 chrII:405719-406145 ( 37) AAGATTATGGGTTCGACCCCC 1 chrX:355195-355654 ( 41) AAGATTATGGGTTCGACCCCC 1 chrXIII:747755-748124 ( 13) AAGATTATGGGTTCGACCCCC 1 chrV:138503-138854 ( 79) AAGATTATGGGTTCGACCCCC 1 chrVIII:134194-134512 ( 59) GACAACCCCGGTTCGAATCCG 1 chrIV:802588-802956 ( 19) GACAACCCCGGTTCGAATCCG 1 chrXII:448527-448877 ( 8) GACAACCCCGGTTCGAATCCG 1 chrIV:520813-521158 ( 78) GACAACCCCGGTTCGAATCCG 1 chrXV:438487-438870 ( 80) AATGTCAGGGGTTCGAGCCCC 1 chrXI:578797-579220 ( 72) AATGTCAGGGGTTCGAGCCCC 1 chrIX:174925-175203 ( 59) GAGATCATCGGTTCAAATCCG 1 chrXIV:104657-105010 ( 64) GAGATCATCGGTTCAAATCCG 1 chrIII:295307-295777 ( 34) GAGATCATCGGTTCAAATCCG 1 chrIV:434089-434450 ( 55) GAGATCATCGGTTCAAATCCG 1 chrX:538414-538740 ( 69) AAGACTGCGGGTTCGAGTCCC 1 chrII:266218-266598 ( 62) GAGATCATCGGTTCAAATCCG 1 chrVIII:115961-116337 ( 18) GAGATCATCGGTTCAAATCCG 1 chrXV:353918-354276 ( 4) GAGATCATCGGTTCAAATCCG 1 chrIV:488552-489034 ( 64) AAGATCCCGAGTTCGAACCTC 1 chrII:326627-327030 ( 24) AAGATCCCGAGTTCGAACCTC 1 chrXI:379654-379879 ( 7) AACGTCCCCAGTTCGATCCTG 1 chrXIII:372324-372612 ( 37) AACGTCCCCAGTTCGATCCTG 1 chrXV:663700-664038 ( 3) AACGTCCCCAGTTCGATCCTG 1 chrXIII:420454-420812 ( 15) AACGTCCCCAGTTCGATCCTG 1 chrVII:412153-412529 ( 13) AACGTCCCCAGTTCGATCCTG 1 chrVII:823319-823679 ( 76) AACGTCCCCAGTTCGATCCTG 1 chrXV:487409-487615 ( 20) AAGATCGTGAGTTCAACCCTC 1 chrXII:975886-976187 ( 7) AAGATCGTGAGTTCAACCCTC 1 chrXVI:810555-810833 ( 75) AAGATCGTGAGTTCAACCCTC 1 chrVII:730990-731331 ( 70) AAGATCGTGAGTTCAACCCTC 1 chrVI:137328-137700 ( 32) AAGATCGTGAGTTCAACCCTC 1 chrXIV:102557-102950 ( 56) AAGATCGTGAGTTCAACCCTC 1 chrXIV:632444-632795 ( 73) AAGATCGTGAGTTCAACCCTC 1 chrXII:818500-818779 ( 61) TGTGATCCGGGTTCGAGTCCC 1 chrXV:976347-976597 ( 41) AAGGTCGAGAGTTCGAACCTC 1 chrIV:1095222-1095615 ( 12) GAGGTCCTGTGTTCGATCCAC 1 chrIV:1175707-1176021 ( 57) AAGGTCGAGAGTTCGAACCTC 1 chrVII:440558-440975 ( 10) GAGGTCCTGTGTTCGATCCAC 1 chrX:390920-391281 ( 3) AAGGTCGAGAGTTCGAACCTC 1 chrXVI:622400-622797 ( 2) GAGGTCCTGTGTTCGATCCAC 1 chrXIII:572771-573108 ( 4) AAGGTCGAGAGTTCGAACCTC 1 chrXVI:55953-56439 ( 33) AGGGTTGCAGGTTCAATTCCT 1 chrIV:619846-620193 ( 10) AAGATTCCAGGTTCAAGTCCT 1 chrXII:374203-374560 ( 66) AAGATTCCAGGTTCAAGTCCT 1 chrXV:340173-340522 ( 12) AAGATTCCAGGTTCAAGTCCT 1 chrV:492214-492588 ( 11) AAGATTCCAGGTTCAAGTCCT 1 chrXIII:168666-169044 ( 48) GAGATCGGGCGTTCGACTCGC 1 chrIV:946136-946549 ( 78) GAGATCGGGCGTTCGACTCGC 1 chrVII:1004067-1004392 ( 78) AAGGTCGTTAGTTCAATTCTG 1 chrXVI:744119-744473 ( 79) AAGGTCGTTAGTTCAATTCTG 1 chrIX:324205-324396 ( 63) CCAGATCGGGGTTCAATTCCC 1 chrX:541407-541688 ( 52) CCAGATCGGGGTTCAATTCCC 1 chrXIII:463401-463770 ( 60) CCAGATCGGGGTTCAATTCCC 1 chrX:204561-204940 ( 76) CCAGATCGGGGTTCAATTCCC 1 chrVII:544452-544818 ( 2) CCAGATCGGGGTTCAATTCCC 1 chrVIII:132948-133131 ( 47) GCCCGCGCAGGTTCGAGTCCT 1 chrVII:561544-561762 ( 69) GCCCGCGCAGGTTCGAGTCCT 1 chrI:182401-182635 ( 64) GCCCGCGCAGGTTCGAGTCCT 1 chrIV:980842-981184 ( 21) GCCCGCGCAGGTTCGAGTCCT 1 chrII:226937-227300 ( 58) GCCCGCGCAGGTTCGAGTCCT 1 chrXIII:259032-259392 ( 6) GCCCGCGCAGGTTCGAGTCCT 1 chrIV:437616-437971 ( 80) GCCCGCGCAGGTTCGAGTCCT 1 chrVII:706982-707235 ( 60) TTGGTCCTTAGTTCGATCCTG 1 chrXV:710088-710339 ( 79) GATGTCCTCGGATCGAAACCG 1 chrX:517697-518031 ( 9) GATGTCCTCGGATCGAAACCG 1 chrIII:149757-150121 ( 72) GATGTCCTCGGATCGAAACCG 1 chrV:207336-207514 ( 23) TGAAACCCTGGTTCGATTCTA 1 chrVII:319735-319985 ( 12) TGAAACCCTGGTTCGATTCTA 1 chrVII:110400-110813 ( 79) TGAAACCCTGGTTCGATTCTA 1 chrXIII:362906-363249 ( 78) TGAAACCCTGGTTCGATTCTA 1 chrIV:519623-519915 ( 77) GTCCGCGCGAGTTCGAACCTC 1 chrXVI:689400-689793 ( 70) GCCCGCGCTGGTTCAAATCCT 1 chrV:288244-288680 ( 41) GCCCGCGCTGGTTCAAATCCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCMBSGGTTCGAYYCCS MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 37667 bayes= 9.52098 E= 2.3e-439 31 -230 126 -139 100 -81 43 -430 -121 -30 179 -272 28 -130 151 -1364 -66 -103 -130 104 -1364 200 -1364 -40 -2 116 14 -249 -330 116 38 -9 -172 87 134 -213 -66 -362 200 -372 -1364 -1364 238 -1364 -372 -1364 -1364 166 -1364 -1364 -1364 170 -1364 238 -1364 -1364 -40 -1364 200 -1364 170 -1364 -1364 -1364 -78 14 -3 45 -372 111 -1364 87 -1364 238 -1364 -1364 -372 189 -362 -30 -330 134 97 -149 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCMBSGGTTCGAYYCCS MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 128 E= 2.3e-439 0.382812 0.039062 0.460938 0.117188 0.617188 0.109375 0.257812 0.015625 0.132812 0.156250 0.664062 0.046875 0.375000 0.078125 0.546875 0.000000 0.195312 0.093750 0.078125 0.632812 0.000000 0.765625 0.000000 0.234375 0.304688 0.429688 0.210938 0.054688 0.031250 0.429688 0.250000 0.289062 0.093750 0.351562 0.484375 0.070312 0.195312 0.015625 0.765625 0.023438 0.000000 0.000000 1.000000 0.000000 0.023438 0.000000 0.000000 0.976562 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.234375 0.000000 0.765625 0.000000 1.000000 0.000000 0.000000 0.000000 0.179688 0.210938 0.187500 0.421875 0.023438 0.414062 0.000000 0.562500 0.000000 1.000000 0.000000 0.000000 0.023438 0.710938 0.015625 0.250000 0.031250 0.484375 0.375000 0.109375 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCMBSGGTTCGAYYCCS MEME-2 regular expression -------------------------------------------------------------------------------- [GA][AG]G[GA]T[CT][CAG][CTG][GC]GGTTC[GA]A[TC][TC]C[CT][CG] -------------------------------------------------------------------------------- Time 390.81 secs. ******************************************************************************** ******************************************************************************** MOTIF AGTCNDRCGCKCTACCAAYTGVSCHAAV MEME-3 width = 28 sites = 54 llr = 1244 E-value = 1.3e-279 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGTCNDRCGCKCTACCAAYTGVSCHAAV MEME-3 Description -------------------------------------------------------------------------------- Simplified A a:1:3371:::::6::77:124::3852 pos.-specific C ::282::9:a:9:2aa:25:13393224 probability G :a12243:a:4:::::2::2737:::24 matrix T ::6:33::::61a2::1157:::14:11 bits 2.4 * ** * 2.1 * ** ** 1.9 * ** * ** * 1.7 ** * *** ** ** * Relative 1.4 ** * *** ** ** ** Entropy 1.2 ** * *** ** ** ** * (33.2 bits) 1.0 ** * ******* ** * * ** * 0.7 ** * ******* ** *** ** * 0.5 **** ******** ********** * * 0.2 **** *********************** 0.0 ---------------------------- Multilevel AGTCAGACGCTCTACCAATTGAGCTAAG consensus C TAG G G C GC ACCC sequence CT C C G G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGTCNDRCGCKCTACCAAYTGVSCHAAV MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------------- chrXIV:374714-375046 - 44 1.34e-14 GTTTTTCTTC AGTCTGGCGCTCTCCCAACTGAGCTAAG TCCGCTTATT chrIV:1095222-1095615 + 61 1.34e-14 TTTTTTCTTC AGTCTGGCGCTCTCCCAACTGAGCTAAG TCCGCTAACA chrVII:115333-115683 - 35 1.77e-14 TGCGCTTAAA AGCCGAACGCTCTACCAACTGAGCTAAC AAGGATGAGT chrXV:438487-438870 - 20 1.77e-14 TGCGCTTAAA AGCCGAACGCTCTACCAACTGAGCTAAC AAGGATGAGT chrXI:578797-579220 - 12 1.77e-14 TGCGCTTAAA AGCCGAACGCTCTACCAACTGAGCTAAC AAGGATGAGT chrIV:359420-359762 - 41 1.77e-14 TGCGCTTAAA AGCCGAACGCTCTACCAACTGAGCTAAC AAGGATGAGT chrXII:875215-875582 - 33 1.77e-14 TGCGCTTAAA AGCCGAACGCTCTACCAACTGAGCTAAC AAGGATGAGT chrXVI:769102-769482 + 28 1.77e-14 TGCGCTTAAA AGCCGAACGCTCTACCAACTGAGCTAAC AAGGATGAGT chrVII:185599-185921 + 44 7.38e-14 TATGATTAAG AGTCATACGCGCTACCGATTGCGCCAAC AAGGCTATTT chrV:135292-135640 + 49 7.38e-14 TATGATTAAG AGTCATACGCGCTACCGATTGCGCCAAC AAGGCTTTTT chrXIII:480521-480846 + 28 7.38e-14 TATGATTAAG AGTCATACGCGCTACCGATTGCGCCAAC AAGGCTACTT chrX:414815-415114 - 57 7.38e-14 TATGATTAAG AGTCATACGCGCTACCGATTGCGCCAAC AAGGCTAATT chrIII:151172-151514 + 31 7.38e-14 TATGATTAAG AGTCATACGCGCTACCGATTGCGCCAAC AAGGCTCTTT chrVII:876235-876571 - 46 7.38e-14 TATGATTAAG AGTCATACGCGCTACCGATTGCGCCAAC AAGGCTATTC chrXVI:581904-582266 - 32 7.38e-14 TATGATTAAG AGTCATACGCGCTACCGATTGCGCCAAC AAGGCTCTTT chrVI:226599-226921 + 18 7.38e-14 TATGATTAAG AGTCATACGCGCTACCGATTGCGCCAAC AAGGCATTTT chrIX:300127-300445 + 32 7.38e-14 TATGATTAAG AGTCATACGCGCTACCGATTGCGCCAAC AAGGCTATTT chrIV:1201594-1201943 - 37 7.38e-14 TATGATTAAG AGTCATACGCGCTACCGATTGCGCCAAC AAGGCTATTT chrV:435659-435978 + 24 7.38e-14 TATGATTAAG AGTCATACGCGCTACCGATTGCGCCAAC AAGGCTCTTA chrVIII:358384-358724 + 33 1.64e-13 TTTTTTCTTC AGTCTGGCGCTCTCCCAACTGAGCTAAA TCCGCTTACT chrVII:440558-440975 + 59 1.64e-13 TTTTTTCTTC AGTCTGGCGCTCTCCCAACTGAGCTAAA TCCGCATATA chrVIII:237762-238102 + 25 1.64e-13 TTTTTTCTTC AGTCTGGCGCTCTCCCAACTGAGCTAAA TCCGCTTACT chrXIII:352116-352453 - 51 1.64e-13 GTATTTCTTC AGTCTGGCGCTCTCCCAACTGAGCTAAA TCCGCTTATA chrXVI:622400-622797 + 51 1.64e-13 TTTTTTCTTC AGTCTGGCGCTCTCCCAACTGAGCTAAA TCCGCATATC chrVI:157829-158161 + 30 1.64e-13 TTTTTTCTTC AGTCTGGCGCTCTCCCAACTGAGCTAAA TCCGCTTCTA chrII:36238-36571 - 49 1.64e-13 GTTTTTCTTC AGTCTGGCGCTCTCCCAACTGAGCTAAA TCCGCTTACA chrXVI:560081-560450 + 42 1.64e-13 TTTTTTCTTC AGTCTGGCGCTCTCCCAACTGAGCTAAA TCCGCTCAAT chrVII:794255-794580 - 55 2.75e-11 CTTCCTTGCA AGGGAAGCGCGCTACCAACTGCGCCATG TGCCCGCAAT chrXII:214796-215099 + 26 2.75e-11 CTTCCTTGCA AGGGAAGCGCGCTACCAACTGCGCCATG TGCCCTAAAA chrI:166136-166493 - 8 2.75e-11 CTTCCTTGCA AGGGAAGCGCGCTACCAACTGCGCCATG TGCCCAA chrXV:976347-976597 - 4 9.31e-11 TCAGATTATG AGACTGACGCTCTTCCTACTGAGCTACT GAA chrX:422777-423103 - 52 9.31e-11 TCAGATTATG AGACTGACGCTCTTCCTACTGAGCTACT GAAGCATACA chrIV:1175707-1176021 - 20 9.31e-11 TCAGATTATG AGACTGACGCTCTTCCTACTGAGCTACT GAAGCTTTGT chrX:390920-391281 + 33 9.31e-11 TCAGATTATG AGACTGACGCTCTTCCTACTGAGCTACT GAAGCACTAT chrXIII:572771-573108 + 34 9.31e-11 TCAGATTATG AGACTGACGCTCTTCCTACTGAGCTACT GAAGCTATCT chrXV:710088-710339 - 42 1.18e-10 CAGGGTTATG AGCCCTGCGCGCTTCCACTGCGCCACGG CGCTGCTAAT chrX:517697-518031 + 39 1.18e-10 CAGGGTTATG AGCCCTGCGCGCTTCCACTGCGCCACGG CGCTTAACTT chrXVI:338764-339084 + 14 1.18e-10 CAGGGTTATG AGCCCTGCGCGCTTCCACTGCGCCACGG CGCTGCTAAA chrIII:149757-150121 - 35 1.18e-10 CAGGGTTATG AGCCCTGCGCGCTTCCACTGCGCCACGG CGCTCAACAT chrV:99973-100291 - 55 1.18e-10 CAGGGTTATG AGCCCTGCGCGCTTCCACTGCGCCACGG CGCTTAGCCA chrVII:878574-878980 + 57 3.46e-10 ATTTAATTGG AGTCGAAAGCTCTACCATTGAGCCACCG CTTCATCTTG chrVII:287215-287613 + 60 3.46e-10 ATTTAATTGG AGTCGAAAGCTCTACCATTGAGCCACCG CTTCATCTTG chrX:415827-416198 + 43 3.46e-10 ATTTAATTGG AGTCGAAAGCTCTACCATTGAGCCACCG CTTCAACTTT chrXI:302758-303133 - 27 3.46e-10 ATTTAATTGG AGTCGAAAGCTCTACCATTGAGCCACCG CTTCATCTTG chrXIII:379213-379573 + 34 3.46e-10 ATTTAATTGG AGTCGAAAGCTCTACCATTGAGCCACCG CTTCAACTTT chrVIII:466827-467126 - 68 7.74e-10 TTACA AGTGCAACGCTCTACCACTAAGCTAAGG AGGCTAAAAA chrVII:1004067-1004392 - 41 7.74e-10 TTGCATTACA AGTGCAACGCTCTACCACTAAGCTAAGG AGGCAAACCC chrVII:661580-661909 - 59 7.74e-10 TTGCATTACA AGTGCAACGCTCTACCACTAAGCTAAGG AGGCAAATTT chrXVI:744119-744473 - 42 7.74e-10 TTGCATTACA AGTGCAACGCTCTACCACTAAGCTAAGG AGGCTTTTAC chrIV:568734-569134 - 2 1.66e-09 TCTGATTAGA AGTCAGACGCGTTGCCATTACGCCACGC G chrX:355195-355654 - 4 1.66e-09 TCTGATTAGA AGTCAGACGCGTTGCCATTACGCCACGC GAG chrX:538414-538740 - 32 1.74e-09 TCTCCTTAGG AGGGAGACGCGTTACCATTACGCCAACG GAACCAACTT chrXI:46680-46960 + 5 5.28e-09 TACG AGTGCGATGCCTTACCACTTGGCCAAAA GGGCTGAGTA chrIV:884228-884592 - 6 1.16e-08 TGTTGCTATA AGCACGAAGCTCTAACCACTGAGCTACA CGAGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGTCNDRCGCKCTACCAAYTGVSCHAAV MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:374714-375046 1.3e-14 43_[-3]_29 chrIV:1095222-1095615 1.3e-14 60_[+3]_12 chrVII:115333-115683 1.8e-14 34_[-3]_38 chrXV:438487-438870 1.8e-14 19_[-3]_53 chrXI:578797-579220 1.8e-14 11_[-3]_61 chrIV:359420-359762 1.8e-14 40_[-3]_32 chrXII:875215-875582 1.8e-14 32_[-3]_40 chrXVI:769102-769482 1.8e-14 27_[+3]_45 chrVII:185599-185921 7.4e-14 43_[+3]_29 chrV:135292-135640 7.4e-14 48_[+3]_24 chrXIII:480521-480846 7.4e-14 27_[+3]_45 chrX:414815-415114 7.4e-14 56_[-3]_16 chrIII:151172-151514 7.4e-14 30_[+3]_42 chrVII:876235-876571 7.4e-14 45_[-3]_27 chrXVI:581904-582266 7.4e-14 31_[-3]_41 chrVI:226599-226921 7.4e-14 17_[+3]_55 chrIX:300127-300445 7.4e-14 31_[+3]_41 chrIV:1201594-1201943 7.4e-14 36_[-3]_36 chrV:435659-435978 7.4e-14 23_[+3]_49 chrVIII:358384-358724 1.6e-13 32_[+3]_40 chrVII:440558-440975 1.6e-13 58_[+3]_14 chrVIII:237762-238102 1.6e-13 24_[+3]_48 chrXIII:352116-352453 1.6e-13 50_[-3]_22 chrXVI:622400-622797 1.6e-13 50_[+3]_22 chrVI:157829-158161 1.6e-13 29_[+3]_43 chrII:36238-36571 1.6e-13 48_[-3]_24 chrXVI:560081-560450 1.6e-13 41_[+3]_31 chrVII:794255-794580 2.7e-11 54_[-3]_18 chrXII:214796-215099 2.7e-11 25_[+3]_47 chrI:166136-166493 2.7e-11 7_[-3]_65 chrXV:976347-976597 9.3e-11 3_[-3]_69 chrX:422777-423103 9.3e-11 51_[-3]_21 chrIV:1175707-1176021 9.3e-11 19_[-3]_53 chrX:390920-391281 9.3e-11 32_[+3]_40 chrXIII:572771-573108 9.3e-11 33_[+3]_39 chrXV:710088-710339 1.2e-10 41_[-3]_31 chrX:517697-518031 1.2e-10 38_[+3]_34 chrXVI:338764-339084 1.2e-10 13_[+3]_59 chrIII:149757-150121 1.2e-10 34_[-3]_38 chrV:99973-100291 1.2e-10 54_[-3]_18 chrVII:878574-878980 3.5e-10 56_[+3]_16 chrVII:287215-287613 3.5e-10 59_[+3]_13 chrX:415827-416198 3.5e-10 42_[+3]_30 chrXI:302758-303133 3.5e-10 26_[-3]_46 chrXIII:379213-379573 3.5e-10 33_[+3]_39 chrVIII:466827-467126 7.7e-10 67_[-3]_5 chrVII:1004067-1004392 7.7e-10 40_[-3]_32 chrVII:661580-661909 7.7e-10 58_[-3]_14 chrXVI:744119-744473 7.7e-10 41_[-3]_31 chrIV:568734-569134 1.7e-09 1_[-3]_71 chrX:355195-355654 1.7e-09 3_[-3]_69 chrX:538414-538740 1.7e-09 31_[-3]_41 chrXI:46680-46960 5.3e-09 4_[+3]_68 chrIV:884228-884592 1.2e-08 5_[-3]_67 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGTCNDRCGCKCTACCAAYTGVSCHAAV MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGTCNDRCGCKCTACCAAYTGVSCHAAV width=28 seqs=54 chrXIV:374714-375046 ( 44) AGTCTGGCGCTCTCCCAACTGAGCTAAG 1 chrIV:1095222-1095615 ( 61) AGTCTGGCGCTCTCCCAACTGAGCTAAG 1 chrVII:115333-115683 ( 35) AGCCGAACGCTCTACCAACTGAGCTAAC 1 chrXV:438487-438870 ( 20) AGCCGAACGCTCTACCAACTGAGCTAAC 1 chrXI:578797-579220 ( 12) AGCCGAACGCTCTACCAACTGAGCTAAC 1 chrIV:359420-359762 ( 41) AGCCGAACGCTCTACCAACTGAGCTAAC 1 chrXII:875215-875582 ( 33) AGCCGAACGCTCTACCAACTGAGCTAAC 1 chrXVI:769102-769482 ( 28) AGCCGAACGCTCTACCAACTGAGCTAAC 1 chrVII:185599-185921 ( 44) AGTCATACGCGCTACCGATTGCGCCAAC 1 chrV:135292-135640 ( 49) AGTCATACGCGCTACCGATTGCGCCAAC 1 chrXIII:480521-480846 ( 28) AGTCATACGCGCTACCGATTGCGCCAAC 1 chrX:414815-415114 ( 57) AGTCATACGCGCTACCGATTGCGCCAAC 1 chrIII:151172-151514 ( 31) AGTCATACGCGCTACCGATTGCGCCAAC 1 chrVII:876235-876571 ( 46) AGTCATACGCGCTACCGATTGCGCCAAC 1 chrXVI:581904-582266 ( 32) AGTCATACGCGCTACCGATTGCGCCAAC 1 chrVI:226599-226921 ( 18) AGTCATACGCGCTACCGATTGCGCCAAC 1 chrIX:300127-300445 ( 32) AGTCATACGCGCTACCGATTGCGCCAAC 1 chrIV:1201594-1201943 ( 37) AGTCATACGCGCTACCGATTGCGCCAAC 1 chrV:435659-435978 ( 24) AGTCATACGCGCTACCGATTGCGCCAAC 1 chrVIII:358384-358724 ( 33) AGTCTGGCGCTCTCCCAACTGAGCTAAA 1 chrVII:440558-440975 ( 59) AGTCTGGCGCTCTCCCAACTGAGCTAAA 1 chrVIII:237762-238102 ( 25) AGTCTGGCGCTCTCCCAACTGAGCTAAA 1 chrXIII:352116-352453 ( 51) AGTCTGGCGCTCTCCCAACTGAGCTAAA 1 chrXVI:622400-622797 ( 51) AGTCTGGCGCTCTCCCAACTGAGCTAAA 1 chrVI:157829-158161 ( 30) AGTCTGGCGCTCTCCCAACTGAGCTAAA 1 chrII:36238-36571 ( 49) AGTCTGGCGCTCTCCCAACTGAGCTAAA 1 chrXVI:560081-560450 ( 42) AGTCTGGCGCTCTCCCAACTGAGCTAAA 1 chrVII:794255-794580 ( 55) AGGGAAGCGCGCTACCAACTGCGCCATG 1 chrXII:214796-215099 ( 26) AGGGAAGCGCGCTACCAACTGCGCCATG 1 chrI:166136-166493 ( 8) AGGGAAGCGCGCTACCAACTGCGCCATG 1 chrXV:976347-976597 ( 4) AGACTGACGCTCTTCCTACTGAGCTACT 1 chrX:422777-423103 ( 52) AGACTGACGCTCTTCCTACTGAGCTACT 1 chrIV:1175707-1176021 ( 20) AGACTGACGCTCTTCCTACTGAGCTACT 1 chrX:390920-391281 ( 33) AGACTGACGCTCTTCCTACTGAGCTACT 1 chrXIII:572771-573108 ( 34) AGACTGACGCTCTTCCTACTGAGCTACT 1 chrXV:710088-710339 ( 42) AGCCCTGCGCGCTTCCACTGCGCCACGG 1 chrX:517697-518031 ( 39) AGCCCTGCGCGCTTCCACTGCGCCACGG 1 chrXVI:338764-339084 ( 14) AGCCCTGCGCGCTTCCACTGCGCCACGG 1 chrIII:149757-150121 ( 35) AGCCCTGCGCGCTTCCACTGCGCCACGG 1 chrV:99973-100291 ( 55) AGCCCTGCGCGCTTCCACTGCGCCACGG 1 chrVII:878574-878980 ( 57) AGTCGAAAGCTCTACCATTGAGCCACCG 1 chrVII:287215-287613 ( 60) AGTCGAAAGCTCTACCATTGAGCCACCG 1 chrX:415827-416198 ( 43) AGTCGAAAGCTCTACCATTGAGCCACCG 1 chrXI:302758-303133 ( 27) AGTCGAAAGCTCTACCATTGAGCCACCG 1 chrXIII:379213-379573 ( 34) AGTCGAAAGCTCTACCATTGAGCCACCG 1 chrVIII:466827-467126 ( 68) AGTGCAACGCTCTACCACTAAGCTAAGG 1 chrVII:1004067-1004392 ( 41) AGTGCAACGCTCTACCACTAAGCTAAGG 1 chrVII:661580-661909 ( 59) AGTGCAACGCTCTACCACTAAGCTAAGG 1 chrXVI:744119-744473 ( 42) AGTGCAACGCTCTACCACTAAGCTAAGG 1 chrIV:568734-569134 ( 2) AGTCAGACGCGTTGCCATTACGCCACGC 1 chrX:355195-355654 ( 4) AGTCAGACGCGTTGCCATTACGCCACGC 1 chrX:538414-538740 ( 32) AGGGAGACGCGTTACCATTACGCCAACG 1 chrXI:46680-46960 ( 5) AGTGCGATGCCTTACCACTTGGCCAAAA 1 chrIV:884228-884592 ( 6) AGCACGAAGCTCTAACCACTGAGCTACA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGTCNDRCGCKCTACCAAYTGVSCHAAV MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 28 n= 34370 bayes= 9.88147 E= 1.3e-279 170 -1240 -1240 -1240 -1240 -1240 238 -1240 -173 21 -137 99 -405 209 -20 -1240 3 9 9 -15 11 -1240 95 -6 111 -1240 80 -1240 -147 218 -1240 -405 -1240 -1240 238 -1240 -1240 238 -1240 -1240 -1240 -337 109 90 -1240 227 -1240 -206 -1240 -1240 -1240 170 94 -5 -237 -73 -405 236 -1240 -1240 -1240 238 -1240 -1240 115 -337 9 -173 111 -5 -1240 -106 -1240 127 -1240 80 -125 -1240 -5 115 -89 -37 184 -1240 40 43 80 -1240 -1240 80 180 -1240 -1240 227 -1240 -206 11 43 -1240 40 134 21 -1240 -1240 75 21 9 -247 -73 88 95 -173 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGTCNDRCGCKCTACCAAYTGVSCHAAV MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 28 nsites= 54 E= 1.3e-279 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.092593 0.222222 0.074074 0.611111 0.018519 0.814815 0.166667 0.000000 0.314815 0.203704 0.203704 0.277778 0.333333 0.000000 0.370370 0.296296 0.666667 0.000000 0.333333 0.000000 0.111111 0.870370 0.000000 0.018519 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.018519 0.407407 0.574074 0.000000 0.925926 0.000000 0.074074 0.000000 0.000000 0.000000 1.000000 0.592593 0.185185 0.037037 0.185185 0.018519 0.981481 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.685185 0.018519 0.203704 0.092593 0.666667 0.185185 0.000000 0.148148 0.000000 0.462963 0.000000 0.537037 0.129630 0.000000 0.185185 0.685185 0.166667 0.148148 0.685185 0.000000 0.407407 0.259259 0.333333 0.000000 0.000000 0.333333 0.666667 0.000000 0.000000 0.925926 0.000000 0.074074 0.333333 0.259259 0.000000 0.407407 0.777778 0.222222 0.000000 0.000000 0.518519 0.222222 0.203704 0.055556 0.185185 0.351852 0.370370 0.092593 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGTCNDRCGCKCTACCAAYTGVSCHAAV MEME-3 regular expression -------------------------------------------------------------------------------- AG[TC]C[ATCG][GAT][AG]CGC[TG]CTACC[AG]A[TC]TG[AGC][GC]C[TAC][AC][ACG][GC] -------------------------------------------------------------------------------- Time 556.76 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:460394-460755 6.60e-01 100 chrIX:316159-316589 2.14e-01 100 chrXII:459553-460201 5.69e-01 100 chrII:477075-477455 6.62e-01 100 chrXII:796437-796833 7.17e-01 100 chrXV:216284-216673 5.19e-01 100 chrVIII:382928-383322 7.63e-01 100 chrV:305813-306189 7.21e-01 100 chrXII:922124-922535 5.70e-01 100 chrXII:932102-932484 9.99e-01 100 chrVII:254147-254559 8.16e-01 100 chrXVI:699970-700359 6.52e-01 100 chrIII:163486-163858 1.57e-01 100 chrII:332350-332714 9.69e-01 100 chrXII:713163-713559 7.84e-01 100 chrXIII:551382-551780 8.20e-01 100 chrVII:534817-535188 7.65e-01 100 chrVII:149137-149484 9.73e-01 100 chrXII:781464-781853 9.94e-01 100 chrV:140487-140869 3.16e-01 100 chrXVI:731923-732286 7.28e-01 100 chrIV:1359422-1359779 9.63e-01 100 chrII:605749-606128 6.31e-01 100 chrX:90083-90431 8.23e-01 100 chrXI:618810-619197 6.18e-01 100 chrVII:788351-788706 7.76e-01 100 chrIV:117192-117562 9.22e-01 100 chrVII:310516-310897 9.44e-01 100 chrVIII:125937-126286 5.05e-01 100 chrII:592915-593246 7.22e-01 100 chrVIII:74977-75347 4.34e-01 100 chrIV:130579-130941 7.26e-01 100 chrII:60846-61229 8.98e-01 100 chrXV:866580-866934 8.88e-01 100 chrXVI:76368-76708 3.44e-01 100 chrIV:308007-308360 7.16e-01 100 chrXV:505133-505487 5.22e-01 100 chrXII:673868-674221 5.95e-01 100 chrXV:1028722-1029075 9.95e-01 100 chrV:53540-53893 9.49e-01 100 chrXIV:495233-495561 9.49e-01 100 chrXIV:63126-63458 8.93e-01 100 chrXV:79783-80114 8.23e-01 100 chrXII:241656-241993 9.26e-01 100 chrVIII:505835-506181 8.36e-01 100 chrIV:1300957-1301302 7.42e-01 100 chrX:703278-703614 6.91e-01 100 chrX:75376-75706 3.97e-01 100 chrII:604124-604464 8.78e-01 100 chrIV:835802-836228 4.03e-01 100 chrIV:411288-411617 3.07e-01 100 chrV:423114-423458 9.80e-01 100 chrXIII:225381-225711 7.70e-01 100 chrIX:99653-99992 7.65e-01 100 chrXVI:406203-406549 8.92e-01 100 chrXIII:145918-146272 2.31e-01 100 chrVII:648972-649308 9.99e-01 100 chrXVI:520206-520524 1.04e-01 100 chrV:396229-396549 6.74e-01 100 chrVI:95500-95833 2.19e-01 100 chrIV:221979-222297 8.62e-01 100 chrXIII:732059-732389 5.64e-01 100 chrII:45020-45337 2.91e-01 100 chrXV:92955-93283 1.36e-02 21_[-2(3.56e-05)]_58 chrXI:158254-158580 9.46e-01 100 chrXV:678847-679172 9.14e-01 100 chrII:165092-165402 6.02e-02 100 chrX:73424-73744 6.44e-01 100 chrV:138503-138854 1.22e-15 41_[-3(1.66e-09)]_9_[+2(1.72e-09)]_\ 1 chrXV:779716-780134 2.27e-01 100 chrVII:277068-277375 5.69e-01 100 chrXIII:379213-379573 1.03e-06 33_[+3(3.46e-10)]_39 chrIV:341290-341596 2.20e-01 100 chrXVI:744119-744473 1.43e-10 41_[-3(7.74e-10)]_9_[+2(2.12e-07)]_\ 1 chrX:617751-618103 1.05e-07 47_[-1(2.55e-11)]_33 chrXII:1019007-1019335 8.51e-01 100 chrXIV:96091-96477 1.10e-07 16_[-2(4.58e-10)]_63 chrV:354771-355231 2.97e-06 23_[+2(7.26e-10)]_56 chrVI:65013-65328 6.87e-01 100 chrXVI:560081-560450 5.95e-10 41_[+3(1.64e-13)]_31 chrIII:227778-228168 4.70e-09 24_[-1(1.25e-10)]_56 chrII:415517-415833 9.96e-01 100 chrXI:308035-308387 5.69e-04 30_[+1(2.56e-07)]_50 chrIX:248647-249025 6.83e-10 69_[-1(1.25e-10)]_11 chrXIII:362906-363249 1.31e-03 77_[+2(1.78e-06)]_2 chrVII:555355-555677 1.67e-01 100 chrXVI:769102-769482 2.11e-10 27_[+3(1.77e-14)]_45 chrXII:366079-366432 1.21e-01 100 chrXVI:860220-860568 1.39e-11 32_[-1(1.12e-08)]_22_[+2(8.42e-10)]_\ 5 chrXV:353918-354276 6.89e-15 3_[-2(4.35e-09)]_16_[+1(8.74e-09)]_\ 40 chrXV:94491-94815 1.00e+00 100 chrXVI:435794-436130 2.82e-05 34_[+1(1.07e-06)]_46 chrXIII:572771-573108 2.37e-12 3_[-2(7.02e-08)]_9_[+3(9.31e-11)]_\ 39 chrV:434440-434763 2.58e-01 100 chrIV:437616-437971 6.40e-13 34_[-1(8.03e-11)]_25_[+2(5.90e-07)] chrVIII:115961-116337 6.89e-15 17_[-2(4.35e-09)]_16_[+1(8.74e-09)]_\ 26 chrII:36238-36571 1.24e-09 48_[-3(1.64e-13)]_24 chrVI:157829-158161 2.33e-09 29_[+3(1.64e-13)]_43 chrV:431033-431514 2.11e-02 100 chrXIII:747755-748124 2.06e-15 12_[-2(1.72e-09)]_9_[+3(1.66e-09)]_\ 30 chrXVI:880179-880543 1.67e-05 32_[+1(2.54e-09)]_48 chrVII:438587-438896 4.04e-01 100 chrV:435659-435978 9.88e-10 23_[+3(7.38e-14)]_49 chrXIII:259032-259392 6.40e-13 5_[-2(5.90e-07)]_25_[+1(8.03e-11)]_\ 29 chrV:85131-85438 3.09e-02 54_[+3(9.03e-05)]_18 chrXIV:442835-443224 4.12e-05 32_[-1(2.95e-09)]_48 chrXVI:622400-622797 1.44e-14 1_[-2(7.02e-08)]_28_[+3(1.64e-13)]_\ 22 chrX:390920-391281 2.04e-12 2_[-2(7.02e-08)]_9_[+3(9.31e-11)]_\ 40 chrXV:274500-274891 1.57e-09 33_[-1(1.57e-10)]_47 chrX:523907-524261 3.37e-09 33_[+1(8.03e-11)]_47 chrXI:302758-303133 1.34e-06 26_[-3(3.46e-10)]_46 chrX:355195-355654 2.17e-11 3_[-3(1.66e-09)]_9_[+2(1.72e-09)]_\ 39 chrVII:661580-661909 2.96e-07 58_[-3(7.74e-10)]_14 chrII:405719-406145 3.53e-06 36_[+2(1.72e-09)]_43 chrXIII:352116-352453 4.03e-11 50_[-3(1.64e-13)]_22 chrX:424312-424686 1.81e-07 40_[+1(5.14e-11)]_40 chrX:415827-416198 1.03e-06 42_[+3(3.46e-10)]_30 chrII:266218-266598 6.89e-15 25_[-1(8.74e-09)]_16_[+2(4.35e-09)]_\ 18 chrIV:1075329-1075708 9.38e-08 13_[-2(5.33e-10)]_66 chrVIII:237762-238102 1.39e-09 24_[+3(1.64e-13)]_48 chrXII:167856-168180 3.44e-09 31_[+1(8.03e-11)]_49 chrVII:736171-736528 5.07e-10 44_[-3(1.66e-09)]_28 chrX:542828-543205 2.27e-02 100 chrXIV:241406-241715 1.75e-01 100 chrIII:168184-168548 2.33e-04 38_[+1(1.01e-06)]_42 chrVII:823319-823679 8.71e-09 38_[-1(2.56e-07)]_17_[+2(7.08e-09)]_\ 4 chrVIII:62599-62898 3.10e-01 100 chrXV:228164-228509 4.15e-05 50_[-1(4.51e-09)]_30 chrIV:520813-521158 5.66e-09 34_[-1(2.94e-06)]_23_[+2(2.27e-09)]_\ 2 chrVII:726450-726742 6.04e-01 100 chrII:642922-643240 2.82e-05 29_[+1(1.07e-06)]_51 chrVII:412153-412529 8.71e-09 12_[-2(7.08e-09)]_17_[+1(2.56e-07)]_\ 30 chrXII:897725-898022 9.99e-01 100 chrXII:784187-784553 1.75e-08 39_[-1(1.57e-10)]_41 chrVII:828542-828956 2.06e-15 33_[-2(1.72e-09)]_9_[+3(1.66e-09)]_\ 9 chrII:197335-197621 1.47e-05 71_[-1(2.54e-09)]_9 chrVII:440558-440975 1.44e-14 9_[-2(7.02e-08)]_28_[+3(1.64e-13)]_\ 14 chrVI:191468-191773 1.27e-09 17_[+1(1.57e-10)]_63 chrXII:628219-628623 3.85e-05 17_[-1(2.95e-09)]_63 chrV:288244-288680 1.31e-03 40_[-2(2.21e-06)]_39 chrIV:1201594-1201943 2.25e-16 36_[-3(7.38e-14)]_9_[+2(3.89e-10)]_\ 6 chrXII:731971-732287 1.05e-07 16_[-1(2.55e-11)]_64 chrX:531659-532167 5.96e-06 4_[+2(8.42e-10)]_75 chrX:115854-116178 3.48e-01 100 chrXIII:131710-132057 2.06e-15 1_[-2(1.72e-09)]_9_[+3(1.66e-09)]_\ 41 chrXIII:290644-290987 2.32e-06 76_[+2(7.26e-10)]_3 chrIV:568734-569134 2.17e-11 1_[-3(1.66e-09)]_9_[+2(1.72e-09)]_\ 41 chrVII:110400-110813 7.02e-03 78_[-2(1.78e-06)]_1 chrXII:48742-49060 7.05e-01 100 chrIV:1175707-1176021 2.50e-12 19_[-3(9.31e-11)]_9_[+2(7.02e-08)]_\ 23 chrII:226937-227300 6.40e-13 12_[-1(8.03e-11)]_25_[+2(5.90e-07)]_\ 22 chrIX:300127-300445 2.25e-16 1_[-2(3.89e-10)]_9_[+3(7.38e-14)]_\ 41 chrV:86436-86788 3.18e-09 47_[-1(8.03e-11)]_33 chrXVI:55953-56439 7.70e-04 32_[-2(1.19e-07)]_47 chrVII:541695-542097 2.32e-06 44_[+2(7.26e-10)]_35 chrV:311799-312248 2.38e-07 59_[-2(2.92e-11)]_20 chrXII:448527-448877 3.66e-09 7_[-2(2.27e-09)]_23_[+1(1.83e-06)]_\ 29 chrV:487229-487549 2.32e-06 1_[-2(7.26e-10)]_78 chrXV:226508-226842 5.72e-05 38_[+1(4.67e-08)]_42 chrXVI:775670-775992 2.82e-05 37_[+1(1.07e-06)]_43 chrVI:226599-226921 9.88e-10 17_[+3(7.38e-14)]_55 chrXIII:808139-808485 1.47e-04 37_[+1(8.12e-07)]_43 chrX:233768-234093 4.67e-08 64_[-1(1.89e-07)]_16 chrXII:1028256-1028558 9.66e-01 100 chrXII:875215-875582 2.46e-10 32_[-3(1.77e-14)]_40 chrVII:1004067-1004392 1.10e-10 40_[-3(7.74e-10)]_9_[+2(2.12e-07)]_\ 2 chrIII:142610-142934 1.31e-05 31_[+1(8.74e-09)]_49 chrXIV:632444-632795 1.59e-09 35_[-1(4.51e-09)]_17_[+2(5.32e-08)]_\ 7 chrXIII:837763-838114 2.37e-01 100 chrIV:1095222-1095615 5.41e-15 11_[-2(7.02e-08)]_28_[+3(1.34e-14)]_\ 12 chrVII:287215-287613 1.72e-06 59_[+3(3.46e-10)]_13 chrIV:1401279-1401589 9.67e-01 100 chrIII:127560-127872 4.15e-05 55_[-1(4.51e-09)]_25 chrVI:210504-210867 1.56e-01 100 chrVII:774182-774604 5.70e-17 3_[-1(5.16e-09)]_24_[+2(1.40e-10)]_\ 32 chrIV:359420-359762 1.62e-10 40_[-3(1.77e-14)]_32 chrIV:667862-668248 1.33e-12 11_[-2(1.17e-10)]_17_[+1(2.54e-09)]_\ 31 chrXV:300934-301318 2.12e-06 18_[-1(2.95e-09)]_62 chrXVI:581904-582266 2.25e-16 31_[-3(7.38e-14)]_9_[+2(3.89e-10)]_\ 11 chrIV:946136-946549 1.16e-05 77_[+2(1.96e-07)]_2 chrXVI:689400-689793 4.22e-13 24_[-1(1.25e-10)]_25_[+2(2.21e-06)]_\ 10 chrVII:876235-876571 9.88e-10 45_[-3(7.38e-14)]_27 chrXVI:819362-819706 1.67e-05 50_[-1(2.54e-09)]_30 chrII:326627-327030 1.25e-08 23_[-2(4.93e-09)]_17_[+1(8.12e-07)]_\ 19 chrV:176938-177386 2.97e-06 27_[+2(7.26e-10)]_52 chrVII:845487-845874 1.39e-11 16_[-1(1.12e-08)]_22_[+2(8.42e-10)]_\ 21 chrV:492214-492588 1.07e-11 10_[-2(1.41e-07)]_16_[+1(1.89e-07)]_\ 33 chrV:469290-469640 5.99e-04 47_[-1(2.56e-07)]_33 chrIII:151172-151514 2.25e-16 [-2(3.89e-10)]_9_[+3(7.38e-14)]_42 chrXII:592403-592763 1.05e-07 60_[+1(2.55e-11)]_20 chrIV:1256913-1257245 2.23e-04 32_[+1(1.67e-06)]_48 chrXI:578797-579220 2.72e-16 11_[-3(1.77e-14)]_32_[+2(2.59e-09)]_\ 8 chrXII:797018-797352 4.99e-01 100 chrXIII:296808-297105 2.28e-01 100 chrV:99973-100291 7.02e-08 54_[-3(1.18e-10)]_18 chrX:378193-378529 4.27e-04 54_[-1(2.56e-07)]_26 chrXIV:102557-102950 1.59e-09 18_[-1(4.51e-09)]_17_[+2(5.32e-08)]_\ 24 chrII:645003-645340 3.70e-01 100 chrIV:1017056-1017441 1.65e-06 18_[-2(7.26e-10)]_61 chrX:414815-415114 1.87e-10 56_[-3(7.38e-14)]_16 chrXI:162349-162707 2.06e-15 18_[-2(1.72e-09)]_9_[+3(1.66e-09)]_\ 24 chrVII:205361-205737 4.12e-05 27_[-1(2.95e-09)]_53 chrVII:878574-878980 1.72e-06 56_[+3(3.46e-10)]_16 chrXI:74465-74806 3.22e-05 44_[-1(4.51e-09)]_36 chrIV:802588-802956 1.81e-09 18_[-2(2.27e-09)]_23_[+1(8.59e-07)]_\ 18 chrXVI:210096-210423 3.93e-01 100 chrX:422777-423103 6.36e-08 51_[-3(9.31e-11)]_21 chrVII:738961-739319 1.33e-12 37_[-1(2.54e-09)]_17_[+2(1.17e-10)]_\ 5 chrIX:370248-370588 5.28e-01 100 chrIV:645057-645371 2.23e-04 42_[+1(9.58e-07)]_38 chrX:651294-651586 8.58e-01 100 chrXIV:444475-444772 7.95e-01 100 chrVII:779452-779829 2.01e-07 66_[+2(4.58e-10)]_13 chrVI:101224-101554 2.61e-06 34_[-1(2.95e-09)]_46 chrIX:257375-257685 8.22e-01 100 chrX:538414-538740 3.29e-11 31_[-3(1.74e-09)]_9_[+2(4.35e-09)]_\ 11 chrVIII:103922-104216 9.98e-01 100 chrIV:1305466-1305805 2.09e-09 50_[-1(8.03e-11)]_30 chrI:166136-166493 9.72e-17 7_[-3(2.75e-11)]_9_[+2(2.92e-11)]_\ 35 chrVII:422926-423310 4.12e-05 29_[-1(2.95e-09)]_51 chrIX:254250-254527 7.98e-02 100 chrX:374393-374738 2.06e-15 [-2(1.72e-09)]_9_[+3(1.66e-09)]_42 chrXIII:420454-420812 8.71e-09 14_[-2(7.08e-09)]_17_[+1(2.56e-07)]_\ 28 chrIV:1150728-1151083 1.27e-07 60_[+1(1.57e-10)]_20 chrXIII:480521-480846 9.88e-10 27_[+3(7.38e-14)]_45 chrX:59045-59328 3.47e-09 10_[+1(8.74e-09)]_70 chrIV:488552-489034 7.69e-05 63_[-2(4.93e-09)]_16 chrV:135292-135640 2.25e-16 18_[-2(3.89e-10)]_9_[+3(7.38e-14)]_\ 24 chrV:551166-551500 1.33e-12 11_[-2(1.17e-10)]_17_[+1(2.54e-09)]_\ 31 chrXI:140913-141255 3.02e-01 100 chrXII:962871-963217 1.75e-07 35_[+1(5.14e-11)]_45 chrVI:180832-181212 1.39e-11 11_[-2(8.42e-10)]_22_[+1(1.12e-08)]_\ 26 chrXI:313320-313614 4.04e-01 100 chrXIII:168666-169044 5.08e-05 47_[+2(1.96e-07)]_32 chrXV:663700-664038 8.71e-09 2_[-2(7.08e-09)]_17_[+1(2.56e-07)]_\ 40 chrVI:167281-167636 1.56e-01 100 chrVI:162072-162379 1.50e-05 50_[-1(1.12e-08)]_30 chrVIII:475560-475924 1.33e-07 23_[-2(5.33e-10)]_56 chrXI:517819-518120 5.26e-05 66_[-1(6.76e-09)]_14 chrXI:108768-109070 6.62e-01 100 chrXII:793754-794082 8.01e-01 100 chrXV:438487-438870 2.72e-16 19_[-3(1.77e-14)]_32_[+2(2.59e-09)] chrVII:122118-122528 2.25e-16 [-3(7.38e-14)]_9_[+2(3.89e-10)]_42 chrV:441842-442603 4.36e-01 100 chrVII:115333-115683 2.38e-10 34_[-3(1.77e-14)]_38 chrVII:544452-544818 1.50e-03 1_[-2(3.35e-07)]_78 chrIV:410226-410560 5.70e-17 33_[-1(5.16e-09)]_24_[+2(1.40e-10)]_\ 2 chrXIV:374714-375046 1.20e-10 43_[-3(1.34e-14)]_29 chrVI:137328-137700 1.59e-09 31_[-2(5.32e-08)]_17_[+1(4.51e-09)]_\ 11 chrIV:83393-83729 1.10e-11 34_[-1(8.74e-09)]_22_[+2(8.42e-10)]_\ 3 chrXV:282008-282331 2.47e-05 42_[-1(1.79e-08)]_38 chrVIII:358384-358724 3.53e-10 32_[+3(1.64e-13)]_40 chrX:354079-354438 2.73e-01 100 chrXV:340173-340522 1.07e-11 11_[-2(1.41e-07)]_16_[+1(1.89e-07)]_\ 32 chrXII:214796-215099 5.40e-09 25_[+3(2.75e-11)]_47 chrXII:374203-374560 1.07e-11 29_[-1(1.89e-07)]_16_[+2(1.41e-07)]_\ 14 chrXV:594270-594573 3.26e-05 36_[+1(1.07e-07)]_44 chrIV:434089-434450 1.27e-05 54_[-2(4.35e-09)]_25 chrXV:288040-288386 1.67e-01 100 chrV:61761-62110 1.39e-11 14_[-2(8.42e-10)]_22_[+1(1.12e-08)]_\ 23 chrXVI:572141-572538 4.02e-08 19_[+2(8.42e-10)]_60 chrIV:992689-993020 1.55e-11 25_[-1(1.26e-08)]_22_[+2(8.42e-10)]_\ 12 chrXII:605203-605580 4.60e-09 58_[+3(1.16e-08)]_14 chrIII:295307-295777 1.27e-05 33_[+2(4.35e-09)]_46 chrVII:730990-731331 1.59e-09 32_[-1(4.51e-09)]_17_[+2(5.32e-08)]_\ 10 chrVI:221754-222053 3.31e-01 100 chrVII:794255-794580 4.26e-09 54_[-3(2.75e-11)]_18 chrXIII:195959-196315 2.28e-06 65_[+1(2.54e-09)]_15 chrVII:857278-857653 4.02e-05 50_[+1(2.95e-09)]_30 chrXII:734641-734964 8.79e-06 55_[-1(2.54e-09)]_25 chrXIV:104657-105010 6.89e-15 27_[-1(8.74e-09)]_16_[+2(4.35e-09)]_\ 16 chrXII:426967-427297 9.26e-01 100 chrXVI:856752-857083 2.32e-16 39_[-3(2.03e-08)]_9_[+2(1.40e-10)]_\ 3 chrXII:498534-498860 8.33e-01 100 chrVIII:134194-134512 3.66e-09 15_[-1(1.83e-06)]_23_[+2(2.27e-09)]_\ 21 chrXV:110867-111154 2.01e-07 11_[-2(4.58e-10)]_68 chrIII:123425-123791 2.45e-14 28_[-2(2.07e-13)]_23_[+1(8.23e-08)]_\ 8 chrIV:619846-620193 1.07e-11 9_[-2(1.41e-07)]_16_[+1(1.89e-07)]_\ 34 chrXIII:754431-754723 6.54e-01 100 chrXIV:631759-632062 1.94e-04 39_[+1(2.75e-07)]_41 chrIX:183340-183668 1.67e-05 33_[+1(2.54e-09)]_47 chrXII:92394-92776 2.28e-06 10_[-1(2.54e-09)]_70 chrVII:328427-328822 2.32e-06 49_[+2(7.26e-10)]_30 chrX:396633-396962 1.63e-05 31_[+1(1.12e-08)]_49 chrIX:68237-68507 8.68e-01 100 chrXIII:586542-586866 6.30e-04 29_[+1(2.56e-07)]_51 chrIII:149757-150121 1.31e-10 34_[-3(1.18e-10)]_9_[+2(9.90e-07)]_\ 8 chrXV:571810-572115 6.14e-01 100 chrVIII:296909-297193 2.60e-01 100 chrXI:490802-491102 1.96e-07 71_[-1(1.89e-07)]_9 chrI:138995-139360 3.36e-06 22_[-1(3.91e-09)]_58 chrIV:980842-981184 6.40e-13 20_[-2(5.90e-07)]_25_[+1(8.03e-11)]_\ 14 chrII:347437-347791 1.85e-07 44_[-1(5.14e-11)]_36 chrIX:197430-197759 4.31e-01 100 chrIV:1352288-1352664 3.36e-08 49_[-2(3.89e-10)]_30 chrXI:513241-513544 5.90e-01 100 chrXVI:338764-339084 1.71e-07 13_[+3(1.18e-10)]_59 chrXI:46680-46960 8.49e-07 4_[+3(5.28e-09)]_68 chrXII:656840-657154 7.01e-10 41_[+1(5.16e-09)]_39 chrXVI:378679-378937 8.40e-01 100 chrI:81965-82263 1.51e-01 100 chrVII:930867-931177 1.63e-05 33_[+1(1.12e-08)]_47 chrX:517697-518031 7.15e-11 8_[-2(9.90e-07)]_9_[+3(1.18e-10)]_\ 34 chrXV:113652-113942 3.81e-09 60_[-1(8.74e-09)]_20 chrIX:174925-175203 6.89e-15 22_[-1(8.74e-09)]_16_[+2(4.35e-09)]_\ 21 chrV:443105-443393 1.33e-12 12_[-2(1.17e-10)]_17_[+1(2.54e-09)]_\ 30 chrII:350669-350990 1.33e-02 100 chrVII:700506-701210 3.82e-01 100 chrXI:458446-458764 5.20e-05 7_[-1(2.95e-09)]_73 chrVII:185599-185921 2.25e-16 13_[-2(3.89e-10)]_9_[+3(7.38e-14)]_\ 29 chrXIII:372324-372612 8.71e-09 36_[-2(7.08e-09)]_17_[+1(2.56e-07)]_\ 6 chrX:204561-204940 1.60e-03 75_[+2(3.35e-07)]_4 chrXVI:188651-188911 7.42e-02 100 chrXIII:321047-321346 2.32e-16 10_[-2(1.40e-10)]_9_[+3(2.03e-08)]_\ 32 chrVIII:466827-467126 1.53e-06 67_[-3(7.74e-10)]_5 chrXV:253823-254101 1.97e-01 100 chrVII:366077-366412 9.91e-01 100 chrIV:217202-217500 2.63e-02 100 chrXI:84053-84336 3.10e-07 69_[-1(5.14e-11)]_11 chrIII:178347-178634 9.73e-01 100 chrXV:978842-979111 5.14e-01 100 chrIV:884228-884592 9.72e-06 5_[-3(1.16e-08)]_67 chrV:131008-131307 1.69e-02 28_[+1(6.33e-05)]_52 chrIV:519623-519915 5.68e-10 29_[-1(5.14e-11)]_27_[+2(1.88e-06)]_\ 3 chrXIII:463401-463770 1.53e-03 59_[+2(3.35e-07)]_20 chrV:438562-438852 4.27e-04 48_[-1(2.56e-07)]_32 chrXV:980565-980873 7.22e-07 11_[-1(5.90e-10)]_69 chrXIV:726031-726370 2.29e-07 41_[+1(5.14e-11)]_39 chrXVI:810555-810833 1.59e-09 37_[-1(4.51e-09)]_17_[+2(5.32e-08)]_\ 5 chrVIII:146126-146440 7.35e-16 18_[-2(1.40e-10)]_9_[+3(2.03e-08)]_\ 24 chrX:157472-157768 8.73e-01 100 chrXVI:302701-302979 8.76e-01 100 chrVIII:148956-149236 7.26e-01 100 chrIX:336263-336567 6.45e-01 100 chrV:117715-118258 7.05e-01 100 chrXV:464344-464633 2.28e-06 9_[-1(2.54e-09)]_71 chrVII:405413-405694 3.99e-06 7_[+2(1.72e-09)]_72 chrXV:976347-976597 6.49e-11 3_[-3(9.31e-11)]_9_[+2(7.02e-08)]_\ 39 chrXII:975886-976187 1.59e-09 6_[-2(5.32e-08)]_17_[+1(4.51e-09)]_\ 36 chrII:9438-9730 9.23e-08 54_[-1(5.14e-11)]_26 chrXVI:794532-794790 8.69e-01 100 chrXII:1051984-1052263 1.33e-12 7_[-2(1.17e-10)]_17_[+1(2.54e-09)]_\ 35 chrIV:1450932-1451189 9.90e-01 100 chrX:541407-541688 1.60e-03 51_[+2(3.35e-07)]_28 chrXII:818500-818779 1.87e-06 17_[-1(5.55e-05)]_23_[+2(7.02e-08)]_\ 19 chrXV:710088-710339 8.24e-11 41_[-3(1.18e-10)]_9_[+2(9.90e-07)]_\ 1 chrXIV:405710-405974 2.56e-01 100 chrIII:82383-82665 5.46e-01 100 chrX:197204-197476 1.68e-16 32_[-2(1.40e-10)]_24_[+1(1.60e-08)]_\ 3 chrIII:90833-91089 5.11e-02 30_[+2(5.50e-05)]_49 chrII:167929-168198 3.50e-01 100 chrIV:1461585-1461871 6.31e-02 46_[-2(5.50e-05)]_33 chrVII:706982-707235 2.40e-03 59_[-2(9.90e-07)]_20 chrXI:431397-431646 6.44e-01 100 chrIV:579085-579338 7.49e-01 100 chrVII:319735-319985 6.57e-03 11_[+2(1.78e-06)]_68 chrIV:358133-358379 9.55e-01 100 chrXIV:547059-547337 3.67e-08 17_[+2(4.58e-10)]_62 chrXI:219732-220053 2.00e-09 50_[-1(1.60e-08)]_30 chrIV:490997-491241 6.84e-01 100 chrIV:229522-229764 4.83e-01 100 chrVI:223927-224170 9.01e-01 100 chrI:181122-181365 6.80e-02 30_[+2(5.50e-05)]_49 chrXVI:281653-281896 9.99e-01 100 chrV:362216-362456 7.03e-01 100 chrIV:321681-321938 9.90e-01 100 chrVIII:175099-175337 5.69e-02 100 chrIX:325713-326013 8.46e-01 100 chrXIII:504887-505122 5.67e-02 23_[+2(5.50e-05)]_56 chrX:607867-608130 5.84e-01 100 chrVIII:388754-389024 2.21e-08 63_[-2(4.58e-10)]_16 chrIII:382-519 4.44e-01 100 chrI:182401-182635 1.18e-04 63_[-2(5.90e-07)]_16 chrXIV:569773-569984 5.73e-07 48_[-2(1.17e-10)]_31 chrII:89682-89910 9.72e-01 100 chrXIV:568020-568240 2.61e-06 32_[-1(2.95e-09)]_48 chrXII:522188-522416 6.31e-01 100 chrXIII:298576-298815 1.67e-01 100 chrXV:161164-161384 9.04e-01 100 chrXV:968167-968372 4.65e-02 100 chrIX:210636-210844 1.18e-07 17_[+2(1.17e-10)]_62 chrXI:382205-382425 1.59e-01 100 chrXIV:525038-525233 2.15e-01 100 chrXIV:330846-331067 9.82e-01 100 chrXII:282535-282832 9.95e-01 100 chrXV:487409-487615 4.22e-04 19_[+2(5.32e-08)]_60 chrXI:379654-379879 1.38e-05 6_[+2(7.08e-09)]_73 chrV:270385-270598 9.91e-01 100 chrIV:1355744-1355945 9.32e-01 100 chrXII:262853-263058 9.83e-01 100 chrXII:818886-819147 9.82e-01 100 chrII:181385-181579 7.32e-01 100 chrX:391879-392092 4.54e-02 100 chrXV:159734-159909 3.65e-01 100 chrVII:561544-561762 1.18e-04 68_[-2(5.90e-07)]_11 chrXIII:91855-92062 8.99e-01 100 chrX:745122-745466 7.46e-01 100 chrVII:856765-856937 1.01e-01 100 chrX:139447-139695 9.35e-01 100 chrXV:780596-780848 6.29e-01 100 chrXIII:768269-768461 1.02e-06 63_[-2(1.40e-10)]_16 chrVIII:34697-35041 4.56e-01 100 chrIX:324205-324396 2.49e-03 62_[-2(3.35e-07)]_17 chrVIII:132948-133131 1.59e-04 46_[-2(5.90e-07)]_33 chrVII:401447-401632 2.97e-06 47_[-2(7.26e-10)]_32 chrVIII:35424-35768 5.27e-02 100 chrV:207336-207514 9.60e-03 22_[+2(1.78e-06)]_57 chrXIII:183803-183990 4.05e-06 61_[-2(8.42e-10)]_18 chrXV:168120-168296 3.91e-01 100 chrXII:369773-370117 3.90e-01 100 chrXIV:499341-499515 1.66e-01 100 chrXIV:518993-519158 2.20e-02 100 chrXI:776-1120 6.14e-01 100 chrXIV:89334-89678 4.18e-01 100 chrXI:67817-67995 6.94e-01 100 chrXVI:404641-404795 9.92e-01 100 chrXIV:500283-500627 9.23e-01 100 chrII:88087-88431 5.78e-01 100 chrXV:110274-110618 6.68e-01 100 chrXII:424255-424408 1.08e-01 100 chrVIII:381592-381936 2.22e-01 100 chrX:663905-664249 4.44e-02 100 chrXII:199250-199594 7.00e-01 100 chrV:423982-424326 2.68e-01 100 chrV:85845-86189 3.32e-01 100 chrII:681984-682151 6.56e-01 100 chrXII:233333-233697 9.74e-01 100 chrXIII:552881-553225 2.50e-01 100 chrXV:407619-407963 6.47e-02 100 chrXII:838831-838918 8.39e-01 87 chrX:227846-228190 2.99e-01 100 chrVIII:555850-556194 8.61e-01 100 chrXV:160267-160611 1.39e-01 100 chrXVI:405279-405623 8.32e-01 100 chrVII:609432-609776 9.78e-01 100 chrXI:558721-559065 4.30e-01 100 chrXIII:163780-164124 8.83e-01 100 chrVIII:120139-120483 7.45e-01 100 chrV:249814-249946 7.04e-01 100 chrXII:1012189-1012291 7.01e-03 100 chrI:71902-72246 3.65e-01 100 chrIV:45536-45880 2.15e-01 100 chrV:397356-397700 9.38e-01 100 chrVIII:556689-556862 1.26e-01 100 chrV:78705-79049 7.24e-01 100 chrXII:806459-806803 1.09e-01 100 chrXII:202016-202360 7.36e-01 100 chrXII:636890-637234 4.46e-01 100 chrXV:234345-234689 7.14e-01 100 chrVII:346054-346398 1.14e-01 100 chrIV:929640-929984 9.41e-02 100 chrXII:637742-638086 5.46e-01 100 chrXII:254561-254905 3.98e-01 100 chrVII:847905-848249 4.01e-01 100 chrIX:317184-317528 5.04e-01 100 chrVII:479861-480205 8.11e-01 100 chrIII:313759-314103 2.99e-02 100 chrXII:232527-232871 1.39e-02 33_[+2(4.50e-05)]_46 chrIX:317389-317733 5.53e-01 100 chrXII:233333-233733 3.86e-01 100 chrI:72135-72479 5.90e-01 100 chrI:72675-73019 3.94e-02 100 chrVII:480060-480404 2.94e-01 100 chrI:72446-72790 2.15e-02 17_[-2(4.21e-05)]_62 chrXII:199449-199793 5.55e-01 100 chrVIII:120348-120692 8.16e-01 100 chrXIII:163981-164325 7.36e-01 100 chrXII:1012303-1012647 1.28e-01 100 chrVIII:381793-382137 4.16e-01 100 chrXIV:500484-500828 4.90e-01 100 chrXII:1012563-1012907 2.96e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************