Invoking:
  getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa 1> $metrics
Finished invoke:
  name: count_seqs  status: 0  time: 0.041014
Invoking:
  fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa 1> $metrics
Finished invoke:
  name: most_seqs  status: 0  time: 0.066712
Invoking:
  fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/seqs-centered
Finished invoke:
  name: center_seqs  status: 0  time: 0.07261
Invoking:
  fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1
Finished invoke:
  name: shuffle_seqs  status: 0  time: 0.015833
Invoking:
  fasta-subsample /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/seqs-centered 600 -rest /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/seqs-discarded -seed 1 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/seqs-sampled
Finished invoke:
  name: sample_seqs  status: 0  time: 0.067265
Invoking:
  fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background
Finished invoke:
  name: bg  status: 0  time: 0.011651
Invoking:
  meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background -dna -revcomp -nostatus
Finished invoke:
  name: meme  status: 0  time: 893.595097
Invoking:
  dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/seqs-shuffled
Finished invoke:
  name: dreme  status: 0  time: 84.827224
Invoking:
  centrimo -seqlen 420 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml
Finished invoke:
  name: centrimo  status: 0  time: 0.202949
Invoking:
  tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/motif_alignment.txt
Finished invoke:
  name: align  status: 0  time: 0.396529
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background -primary TAMCCACTRSRCCAHVNRVSC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml
Finished invoke:
  name: spamo1  status: 0  time: 0.682255
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background -primary TCGAACCSVKGAYCTYMHGATTAMWAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml
Finished invoke:
  name: spamo2  status: 0  time: 0.536458
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background -primary CACCCRTACAY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml
Finished invoke:
  name: spamo3  status: 0  time: 0.537275
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background -primary BTAAGGCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml
Finished invoke:
  name: spamo4  status: 0  time: 0.29507
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background -primary GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml
Finished invoke:
  name: spamo5  status: 0  time: 0.263613
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background -primary ARAAAWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml
Finished invoke:
  name: spamo6  status: 0  time: 0.461389
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background -primary ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml
Finished invoke:
  name: spamo7  status: 0  time: 0.289071
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background -primary GGYTATCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml
Finished invoke:
  name: spamo8  status: 0  time: 0.253168
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background -primary TAGTRTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml
Finished invoke:
  name: spamo9  status: 0  time: 0.299447
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background -primary CCGTGSA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml
Finished invoke:
  name: spamo10  status: 0  time: 0.271329
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background -primary GTCAKAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml
Finished invoke:
  name: spamo11  status: 0  time: 0.288638
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background -primary TTGAARA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml
Finished invoke:
  name: spamo12  status: 0  time: 0.359537
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background -primary CGTGYTAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml
Finished invoke:
  name: spamo13  status: 0  time: 0.256747
Invoking:
  spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background -primary ACTGAGCT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml
Finished invoke:
  name: spamo14  status: 0  time: 0.222518
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background --motif TAMCCACTRSRCCAHVNRVSC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa
Finished invoke:
  name: fimo1  status: 0  time: 0.242661
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background --motif TCGAACCSVKGAYCTYMHGATTAMWAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa
Finished invoke:
  name: fimo2  status: 0  time: 0.24812
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background --motif CACCCRTACAY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa
Finished invoke:
  name: fimo3  status: 0  time: 0.234982
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background --motif BTAAGGCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa
Finished invoke:
  name: fimo4  status: 0  time: 0.134996
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background --motif GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa
Finished invoke:
  name: fimo5  status: 0  time: 0.134634
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background --motif ARAAAWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa
Finished invoke:
  name: fimo6  status: 0  time: 0.119884
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background --motif ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa
Finished invoke:
  name: fimo7  status: 0  time: 0.134241
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background --motif GGYTATCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa
Finished invoke:
  name: fimo8  status: 0  time: 0.134945
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background --motif TAGTRTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa
Finished invoke:
  name: fimo9  status: 0  time: 0.118798
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background --motif CCGTGSA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa
Finished invoke:
  name: fimo10  status: 0  time: 0.133365
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background --motif GTCAKAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa
Finished invoke:
  name: fimo11  status: 0  time: 0.134632
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background --motif TTGAARA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa
Finished invoke:
  name: fimo12  status: 0  time: 0.119986
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background --motif CGTGYTAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa
Finished invoke:
  name: fimo13  status: 0  time: 0.132981
Invoking:
  fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/background --motif ACTGAGCT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/BY4742--ZAP1.fa
Finished invoke:
  name: fimo14  status: 0  time: 0.134303
Writing output
Invoking:
  meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ZAP1/summary.tsv
Finished invoke:
  name: summary  status: 0  time: 0.150613
Done