******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--YAP1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrIV:1490017-1490409 1.0000 100 chrXIV:586156-586341 1.0000 100 chrXV:621614-622024 1.0000 100 chrVII:700842-701156 1.0000 100 chrXV:444831-445241 1.0000 100 chrVI:225066-225439 1.0000 100 chrXV:113684-113915 1.0000 100 chrI:166259-166669 1.0000 100 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chrXI:327029-327439 1.0000 100 chrXIII:880525-880935 1.0000 100 chrXIV:462034-462239 1.0000 100 chrXVI:770742-771152 1.0000 100 chrVIII:116039-116276 1.0000 100 chrXII:37019-37256 1.0000 100 chrXV:445780-445915 1.0000 100 chrV:305673-306083 1.0000 100 chrXII:1029537-1029947 1.0000 100 chrXII:639975-640178 1.0000 100 chrIV:580042-580452 1.0000 100 chrVIII:236521-236931 1.0000 100 chrXV:109795-110205 1.0000 100 chrVII:774230-774473 1.0000 100 chrXIII:56604-57014 1.0000 100 chrXVI:192254-192664 1.0000 100 chrVI:162134-162322 1.0000 100 chrIV:562637-563047 1.0000 100 chrXI:552104-552514 1.0000 100 chrXI:458445-458720 1.0000 100 chrI:70438-70848 1.0000 100 chrIX:248757-248991 1.0000 100 chrV:152124-152534 1.0000 100 chrXV:622391-622801 1.0000 100 chrXVI:581959-582204 1.0000 100 chrV:140453-140863 1.0000 100 chrXIII:146750-147160 1.0000 100 chrXII:5563-5775 1.0000 100 chrXV:383231-383523 1.0000 100 chrIV:1489377-1489568 1.0000 100 chrXI:283918-284328 1.0000 100 chrXVI:642029-642439 1.0000 100 chrIX:142409-142819 1.0000 100 chrV:86474-86774 1.0000 100 chrIV:221442-221852 1.0000 100 chrIX:142210-142620 1.0000 100 chrVII:545171-545581 1.0000 100 chrXII:65522-65673 1.0000 100 chrXIII:485263-485673 1.0000 100 chrXIV:500386-500704 1.0000 100 chrVII:779530-779741 1.0000 100 chrII:375569-375979 1.0000 100 chrXIV:253730-254140 1.0000 100 chrXV:274604-274841 1.0000 100 chrVIII:411109-411519 1.0000 100 chrXIV:392349-392739 1.0000 100 chrXVI:622501-622756 1.0000 100 chrIV:1352432-1352585 1.0000 100 chrIV:1233678-1234142 1.0000 100 chrX:531865-531965 1.0000 100 chrIII:221544-221954 1.0000 100 chrXIV:229661-230071 1.0000 100 chrX:523988-524088 1.0000 100 chrV:177044-177228 1.0000 100 chrXI:513364-513481 1.0000 100 chrV:304198-304608 1.0000 100 chrV:140228-140638 1.0000 100 chrXI:162508-162643 1.0000 100 chrIV:1182880-1183290 1.0000 100 chrIV:551314-551724 1.0000 100 chrXI:219662-220072 1.0000 100 chrX:648879-648979 1.0000 100 chrXIII:349286-349696 1.0000 100 chrXV:411185-411595 1.0000 100 chrXI:284203-284613 1.0000 100 chrII:350732-350951 1.0000 100 chrVII:541752-541994 1.0000 100 chrII:393786-394196 1.0000 100 chrIV:992712-992929 1.0000 100 chrXV:228243-228456 1.0000 100 chrXIII:259114-259349 1.0000 100 chrXV:24552-24962 1.0000 100 chrXV:382949-383239 1.0000 100 chrV:61810-62068 1.0000 100 chrXII:546688-547098 1.0000 100 chrXIV:619731-620047 1.0000 100 chrVII:323353-323636 1.0000 100 chrIV:323014-323424 1.0000 100 chrXV:797018-797221 1.0000 100 chrVIII:294083-294493 1.0000 100 chrXI:105377-105787 1.0000 100 chrIX:197505-197708 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--YAP1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--YAP1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--YAP1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 598 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 59800 N= 598 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.303 C 0.197 G 0.197 T 0.303 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--YAP1/background): A 0.311 C 0.189 G 0.189 T 0.311 ******************************************************************************** ******************************************************************************** MOTIF DTGGCCVAGTKGKTWARGSG MEME-1 width = 20 sites = 125 llr = 1947 E-value = 1.2e-375 ******************************************************************************** -------------------------------------------------------------------------------- Motif DTGGCCVAGTKGKTWARGSG MEME-1 Description -------------------------------------------------------------------------------- Simplified A 312:::391:::::574::: pos.-specific C :1:1773:::2::2::1:52 probability G 3:89213:9:4a61:34858 matrix T 48::1111:a3:475:12:: bits 2.4 * 2.2 * 1.9 * * * 1.7 ** * * * Relative 1.4 ** ** * ** Entropy 1.2 **** *** ** *** (22.5 bits) 1.0 ***** *** ** *** 0.7 ***** *** ***** *** 0.5 ***** ************* 0.2 ******************** 0.0 -------------------- Multilevel TTGGCCCAGTGGGTAAGGCG consensus A G A T T TGATGC sequence G G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DTGGCCVAGTKGKTWARGSG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------- chrXIII:259114-259349 - 33 1.29e-11 GTATGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrX:523988-524088 - 28 1.29e-11 TAAAGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrXV:274604-274841 + 7 1.29e-11 GTCCCA GTGGCCGAGTGGTTAAGGCG ATGCCCTGCT chrV:86474-86774 + 36 1.29e-11 TTATGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrIV:980906-981150 - 52 1.29e-11 TTGAGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrIV:1150837-1151044 - 26 1.29e-11 TTCAGTCCCA GTGGCCGAGTGGTTAAGGCG ATGCCTGCTA chrVII:561622-561841 - 37 1.29e-11 CATTGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrIV:1305512-1305746 + 57 1.29e-11 TTAAGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrVIII:132951-133214 - 50 1.29e-11 AAGTGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrIV:437662-437921 + 37 1.29e-11 GTAAGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrI:182548-182684 - 12 1.29e-11 TTTTGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrXII:167881-168109 - 55 1.29e-11 ATATGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrXII:784273-784522 + 13 1.29e-11 AACCGTCCCA GTGGCCGAGTGGTTAAGGCG ATGCCTGCTA chrVI:191457-191683 - 68 1.29e-11 TTCTGTCCCA GTGGCCGAGTGGTTAAGGCG ATGCCCTGCT chrIX:248757-248991 + 32 3.97e-11 TTTAGGCACT ATGGCCGAGTGGTTAAGGCG ACAGACTTGA chrIII:227853-228106 + 19 3.97e-11 AAATGGCACT ATGGCCGAGTGGTTAAGGCG AGAGACTCGA chrXVI:689490-689677 + 38 3.97e-11 TTTGGGCACT ATGGCCGAGTGGTTAAGGCG ACAGACTTGA chrVIII:116039-116276 - 47 7.43e-11 TAGAGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrXV:354017-354177 - 41 7.43e-11 TACTGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrIII:295286-295696 + 49 7.43e-11 TTAAGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrXIV:560667-560855 - 29 7.43e-11 ACGGGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrXIV:104687-104933 + 51 7.43e-11 CTGAGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrX:59057-59157 - 36 7.43e-11 AGAAGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrIV:434223-434431 - 34 7.43e-11 AGAAGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrIX:174949-175176 + 25 7.43e-11 ACGAGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrXV:113684-113915 + 59 7.43e-11 TTTAGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrV:551294-551407 - 33 2.88e-10 TACAGGTCTC TTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrIX:183426-183642 - 4 2.88e-10 TCCTGGTCTC TTGGCCCAGTTGGTTAAGGC ACC chrXIV:569735-570145 - 25 2.88e-10 CAGTGGTCTC TTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXVI:819389-819633 + 74 2.88e-10 GAATGGTCTC TTGGCCCAGTTGGTTAAGGC ACCGTGC chrXII:1051944-1052354 - 20 2.88e-10 TCATGGTCTC TTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrV:443194-443367 - 20 2.88e-10 ATTTGGTCTC TTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXII:592471-592718 - 50 4.10e-10 CAATGGGAGT TTGGCCGAGTGGTTTAAGGC GTCAGATTTA chrXV:228243-228456 + 38 1.30e-09 ATTAGACTCC ATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXV:487338-487551 + 51 1.30e-09 GTTAGACTCC ATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXI:74487-74760 + 57 1.30e-09 ATTAGACTCC ATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrVII:731043-731269 + 37 1.30e-09 AAAAGACTCC ATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXII:975951-976160 - 26 1.30e-09 AAAAGACTCC ATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrIII:127606-127860 + 39 1.30e-09 AAATGACTCC ATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrVI:137487-137657 - 12 1.30e-09 GACTGACTCC ATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXIV:102608-102821 + 58 1.30e-09 ATAAGACTCC ATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrX:424459-424559 - 5 1.77e-09 AGATGGAGGG TTGGCCGAGTGGTCTAAGGC GGCA chrXII:962838-963248 - 37 1.77e-09 CGACGGAGGG TTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrVII:794220-794630 + 48 3.64e-09 TTGCGGGCAC ATGGCGCAGTTGGTAGCGCG CTTCCCTTGC chrV:311851-312261 - 64 3.64e-09 TTCTGGGCAC ATGGCGCAGTTGGTAGCGCG CTTCCCTTGC chrVII:774230-774473 + 54 1.67e-08 AATTGGGCGT GTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrIV:410180-410590 + 50 1.67e-08 TATTGGGCGT GTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXII:656806-657216 - 20 1.67e-08 AATTGGGCGT GTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXI:517865-518088 + 68 1.67e-08 CTATGGGCGT GTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrX:197156-197256 - 49 1.67e-08 ATTAGGGCGT GTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrVII:115387-115618 + 42 1.87e-08 CTCATCCTTG TTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXV:438581-438800 + 9 1.87e-08 CATCCTTG TTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXI:578870-579142 + 15 1.87e-08 CTCATCCTTG TTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXVI:769166-769437 - 26 1.87e-08 CTCATCCTTG TTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrIV:359466-359759 + 21 1.87e-08 CTCATCCTTG TTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrVII:700842-701156 - 74 1.87e-08 ATCCTTG TTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXI:458445-458720 + 31 2.96e-08 AAGTGGTTGT TTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrXIII:504778-504988 + 68 2.96e-08 AAGTGGTTGT TTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrVII:857323-857575 - 67 2.96e-08 AAGTGGTTGT TTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrVII:205451-205658 + 23 2.96e-08 AAGTGGTTGT TTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrXII:628264-628552 + 31 2.96e-08 AAGTGGTTGT TTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrIV:1461680-1461944 - 42 2.96e-08 AAGTGGTTGT TTGGCCGAGCGGTCTAAGGC GCCTGATTCA chrIV:1352432-1352585 - 55 4.56e-08 AATAGCCTTG TTGGCGCAATCGGTAGCGCG TATGACTCTT chrXVI:581959-582204 + 37 4.56e-08 AAGAGCCTTG TTGGCGCAATCGGTAGCGCG TATGACTCTT chrVII:122198-122345 + 54 4.56e-08 ATTAGCCTTG TTGGCGCAATCGGTAGCGCG TATGACTCTT chrIX:300200-300354 - 48 4.56e-08 AATAGCCTTG TTGGCGCAATCGGTAGCGCG TATGACTCTT chrVII:185639-185869 - 57 4.56e-08 AATAGCCTTG TTGGCGCAATCGGTAGCGCG TATGACTCTT chrXI:202883-203135 + 46 4.56e-08 AAAAGCCTTG TTGGCGCAATCGGTAGCGCG TATGACTCTT chrIV:1201676-1201924 + 6 4.56e-08 CCTTG TTGGCGCAATCGGTAGCGCG TATGACTCTT chrVI:226608-226842 - 60 4.56e-08 AAATGCCTTG TTGGCGCAATCGGTAGCGCG TATGACTCTT chrX:414869-414969 + 40 4.56e-08 ATTAGCCTTG TTGGCGCAATCGGTAGCGCG TATGACTCTT chrVII:876287-876534 + 40 4.56e-08 AATAGCCTTG TTGGCGCAATCGGTAGCGCG TATGACTCTT chrX:233855-233955 + 49 9.25e-08 CTTGTTCCTC GTGGCCCAATGGTCACGGCG TCTGGCTACG chrXI:490752-491162 + 67 9.25e-08 CTTGTTCCTC GTGGCCCAATGGTCACGGCG TCTGGCTACG chrV:492316-492518 - 32 9.25e-08 CCTATTCCTC GTGGCCCAATGGTCACGGCG TCTGGCTACG chrXVI:622501-622756 - 28 1.35e-07 ATATGCGGAT TTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrVIII:358426-358641 - 61 1.35e-07 GTAAGCGGAT TTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrII:36292-36504 + 56 1.35e-07 GTAAGCGGAT TTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrVI:157885-158130 - 25 1.35e-07 AGAAGCGGAT TTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXIV:374797-374965 + 44 1.35e-07 ATAAGCGGAC TTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrVII:440660-440945 - 30 1.35e-07 ATATGCGGAT TTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXIII:352146-352394 + 66 1.35e-07 ATAAGCGGAT TTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXV:980586-980756 + 60 1.62e-07 CACAAATTGT ATGGGCGTGTGGTCTAGTGG AATGATTCTC chrVIII:388967-389084 - 3 1.62e-07 CAACAGATAC ATGGGCGTGTGGTCTAGTGG TA chrIV:992712-992929 + 60 2.52e-07 CAACAATTGT GAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrX:531753-531853 + 25 2.52e-07 AACAATTAGT GAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrXIII:183861-184024 - 59 2.52e-07 CCAATAAAGA TCGCGCAAGTGGTTTAGTGG TAAAATCCAA chrIV:83483-83644 + 33 2.52e-07 CAAGTTCACT TAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrXV:282083-282245 + 48 2.52e-07 TAACATGAAA GCGCGCAAGTGGTTTAGTGG TAAAATCCAA chrIII:142662-142858 - 44 2.52e-07 TCAAGATTAC TAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrXVI:572214-572336 + 42 2.52e-07 ACACAATACT TCGCGCAAGTGGTTTAGTGG TAAAATCCAA chrVII:823375-823639 + 31 3.25e-07 GAGTGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXIII:372447-372625 - 7 3.25e-07 ACCTGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGC chrXII:687861-688005 - 24 3.25e-07 AATAGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrVIII:85253-85511 - 14 3.25e-07 ATTTGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrV:438600-438824 + 44 3.25e-07 ATTAGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrVII:73775-74027 - 26 3.25e-07 AAGTGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXI:379576-379775 + 61 3.25e-07 AATAGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXV:663771-663974 - 38 3.25e-07 TAGTGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrV:61810-62068 - 54 3.53e-07 AACAAATAGT AAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrVI:162134-162322 + 48 3.53e-07 ACAAGAAAAC AAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrX:396721-396821 - 42 3.53e-07 TATCAAAAGT AAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrVII:930913-931117 - 41 3.53e-07 TATAATCAGT AAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrXVI:860317-860483 + 27 3.53e-07 TGTAAATAAC AAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrVI:180831-181241 - 41 3.53e-07 TCCAAGAAAT AAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrXV:300996-301179 + 58 5.26e-07 TCAGAAAAGA TCGGGCGTGTGGTCTAGTGG TATGATTCTC chrXIV:546964-547199 + 61 5.26e-07 CACGAAATAA TCGGGCGTGTGGTCTAGTGG TATGATTCTC chrVI:101315-101443 + 45 5.26e-07 CAACAATAAT TCGGGCGTGTGGTCTAGTGG TATGATTCTC chrXIV:568010-568247 + 35 5.26e-07 CATAAAATAA TCGGGCGTGTGGTCTAGTGG TATGATTCTC chrXII:92459-92644 + 45 7.12e-07 ACAAGTTAAT AAGGGCGTGTGGTCTAGTGG TATGATTCTC chrXV:464353-464516 + 64 7.12e-07 ACAAGTTAAC AAGGGCGTGTGGTCTAGTGG TATGATTCTC chrXIII:196040-196309 - 29 7.12e-07 ACAAGTTCAC AAGGGCGTGTGGTCTAGTGG TATGATTCTC chrI:139046-139268 + 43 7.12e-07 ATCAATTAGT ACGGGCGTGTGGTCTAGTGG TATGATTCTC chrXV:288092-288295 + 55 7.67e-07 GCTTCTCTCG GTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrXIII:168592-169002 + 54 7.67e-07 GTCACTCTCG GTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrIV:946181-946434 + 61 7.67e-07 TCGACTCTCG GTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrXIII:837787-838047 + 67 7.67e-07 TTGACTCTCG GTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrX:542926-543026 - 29 7.67e-07 AATACTCTCG GTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrXIII:572862-573071 - 14 1.10e-06 GACAGCTTCA GTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrXV:976269-976541 + 72 1.10e-06 GTGCGCTTCA GTAGCTCAGTAGGAAGAGCG TCAGTCTCA chrX:390990-391090 - 27 1.10e-06 TAGTGCTTCA GTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrIV:1175727-1175994 + 25 1.10e-06 CAAAGCTTCA GTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrX:422774-422874 + 14 1.10e-06 GTATGCTTCA GTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrXV:226567-226789 - 36 2.39e-06 TCAAGAAATT CAGCGCAAGTGGTTTAGTGG TAAAATCCAA chrXV:594302-594559 - 28 3.21e-06 ATTGATTGAA ACGCGCAAGTGGTTCAGTGG TTAGAATTTA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DTGGCCVAGTKGKTWARGSG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIII:259114-259349 1.3e-11 32_[-1]_48 chrX:523988-524088 1.3e-11 27_[-1]_53 chrXV:274604-274841 1.3e-11 6_[+1]_74 chrV:86474-86774 1.3e-11 35_[+1]_45 chrIV:980906-981150 1.3e-11 51_[-1]_29 chrIV:1150837-1151044 1.3e-11 25_[-1]_55 chrVII:561622-561841 1.3e-11 36_[-1]_44 chrIV:1305512-1305746 1.3e-11 56_[+1]_24 chrVIII:132951-133214 1.3e-11 49_[-1]_31 chrIV:437662-437921 1.3e-11 36_[+1]_44 chrI:182548-182684 1.3e-11 11_[-1]_69 chrXII:167881-168109 1.3e-11 54_[-1]_26 chrXII:784273-784522 1.3e-11 12_[+1]_68 chrVI:191457-191683 1.3e-11 67_[-1]_13 chrIX:248757-248991 4e-11 31_[+1]_49 chrIII:227853-228106 4e-11 18_[+1]_62 chrXVI:689490-689677 4e-11 37_[+1]_43 chrVIII:116039-116276 7.4e-11 46_[-1]_34 chrXV:354017-354177 7.4e-11 40_[-1]_40 chrIII:295286-295696 7.4e-11 48_[+1]_32 chrXIV:560667-560855 7.4e-11 28_[-1]_52 chrXIV:104687-104933 7.4e-11 50_[+1]_30 chrX:59057-59157 7.4e-11 35_[-1]_45 chrIV:434223-434431 7.4e-11 33_[-1]_47 chrIX:174949-175176 7.4e-11 24_[+1]_56 chrXV:113684-113915 7.4e-11 58_[+1]_22 chrV:551294-551407 2.9e-10 32_[-1]_48 chrIX:183426-183642 2.9e-10 3_[-1]_77 chrXIV:569735-570145 2.9e-10 24_[-1]_56 chrXVI:819389-819633 2.9e-10 73_[+1]_7 chrXII:1051944-1052354 2.9e-10 19_[-1]_61 chrV:443194-443367 2.9e-10 19_[-1]_61 chrXII:592471-592718 4.1e-10 49_[-1]_31 chrXV:228243-228456 1.3e-09 37_[+1]_43 chrXV:487338-487551 1.3e-09 50_[+1]_30 chrXI:74487-74760 1.3e-09 56_[+1]_24 chrVII:731043-731269 1.3e-09 36_[+1]_44 chrXII:975951-976160 1.3e-09 25_[-1]_55 chrIII:127606-127860 1.3e-09 38_[+1]_42 chrVI:137487-137657 1.3e-09 11_[-1]_69 chrXIV:102608-102821 1.3e-09 57_[+1]_23 chrX:424459-424559 1.8e-09 4_[-1]_76 chrXII:962838-963248 1.8e-09 36_[-1]_44 chrVII:794220-794630 3.6e-09 47_[+1]_33 chrV:311851-312261 3.6e-09 63_[-1]_17 chrVII:774230-774473 1.7e-08 53_[+1]_27 chrIV:410180-410590 1.7e-08 49_[+1]_31 chrXII:656806-657216 1.7e-08 19_[-1]_61 chrXI:517865-518088 1.7e-08 67_[+1]_13 chrX:197156-197256 1.7e-08 48_[-1]_32 chrVII:115387-115618 1.9e-08 41_[+1]_39 chrXV:438581-438800 1.9e-08 8_[+1]_72 chrXI:578870-579142 1.9e-08 14_[+1]_66 chrXVI:769166-769437 1.9e-08 25_[-1]_55 chrIV:359466-359759 1.9e-08 20_[+1]_60 chrVII:700842-701156 1.9e-08 73_[-1]_7 chrXI:458445-458720 3e-08 30_[+1]_50 chrXIII:504778-504988 3e-08 67_[+1]_13 chrVII:857323-857575 3e-08 66_[-1]_14 chrVII:205451-205658 3e-08 22_[+1]_58 chrXII:628264-628552 3e-08 30_[+1]_50 chrIV:1461680-1461944 3e-08 41_[-1]_39 chrIV:1352432-1352585 4.6e-08 54_[-1]_26 chrXVI:581959-582204 4.6e-08 36_[+1]_44 chrVII:122198-122345 4.6e-08 53_[+1]_27 chrIX:300200-300354 4.6e-08 47_[-1]_33 chrVII:185639-185869 4.6e-08 56_[-1]_24 chrXI:202883-203135 4.6e-08 45_[+1]_35 chrIV:1201676-1201924 4.6e-08 5_[+1]_75 chrVI:226608-226842 4.6e-08 59_[-1]_21 chrX:414869-414969 4.6e-08 39_[+1]_41 chrVII:876287-876534 4.6e-08 39_[+1]_41 chrX:233855-233955 9.2e-08 48_[+1]_32 chrXI:490752-491162 9.2e-08 66_[+1]_14 chrV:492316-492518 9.2e-08 31_[-1]_49 chrXVI:622501-622756 1.3e-07 27_[-1]_53 chrVIII:358426-358641 1.3e-07 60_[-1]_20 chrII:36292-36504 1.3e-07 55_[+1]_25 chrVI:157885-158130 1.3e-07 24_[-1]_56 chrXIV:374797-374965 1.3e-07 43_[+1]_37 chrVII:440660-440945 1.3e-07 29_[-1]_51 chrXIII:352146-352394 1.3e-07 65_[+1]_15 chrXV:980586-980756 1.6e-07 59_[+1]_21 chrVIII:388967-389084 1.6e-07 2_[-1]_78 chrIV:992712-992929 2.5e-07 59_[+1]_21 chrX:531753-531853 2.5e-07 24_[+1]_56 chrXIII:183861-184024 2.5e-07 58_[-1]_22 chrIV:83483-83644 2.5e-07 32_[+1]_48 chrXV:282083-282245 2.5e-07 47_[+1]_33 chrIII:142662-142858 2.5e-07 43_[-1]_37 chrXVI:572214-572336 2.5e-07 41_[+1]_39 chrVII:823375-823639 3.2e-07 30_[+1]_50 chrXIII:372447-372625 3.2e-07 6_[-1]_74 chrXII:687861-688005 3.2e-07 23_[-1]_57 chrVIII:85253-85511 3.2e-07 13_[-1]_67 chrV:438600-438824 3.2e-07 43_[+1]_37 chrVII:73775-74027 3.2e-07 25_[-1]_55 chrXI:379576-379775 3.2e-07 60_[+1]_20 chrXV:663771-663974 3.2e-07 37_[-1]_43 chrV:61810-62068 3.5e-07 53_[-1]_27 chrVI:162134-162322 3.5e-07 47_[+1]_33 chrX:396721-396821 3.5e-07 41_[-1]_39 chrVII:930913-931117 3.5e-07 40_[-1]_40 chrXVI:860317-860483 3.5e-07 26_[+1]_54 chrVI:180831-181241 3.5e-07 40_[-1]_40 chrXV:300996-301179 5.3e-07 57_[+1]_23 chrXIV:546964-547199 5.3e-07 60_[+1]_20 chrVI:101315-101443 5.3e-07 44_[+1]_36 chrXIV:568010-568247 5.3e-07 34_[+1]_46 chrXII:92459-92644 7.1e-07 44_[+1]_36 chrXV:464353-464516 7.1e-07 63_[+1]_17 chrXIII:196040-196309 7.1e-07 28_[-1]_52 chrI:139046-139268 7.1e-07 42_[+1]_38 chrXV:288092-288295 7.7e-07 54_[+1]_26 chrXIII:168592-169002 7.7e-07 53_[+1]_27 chrIV:946181-946434 7.7e-07 60_[+1]_20 chrXIII:837787-838047 7.7e-07 66_[+1]_14 chrX:542926-543026 7.7e-07 28_[-1]_52 chrXIII:572862-573071 1.1e-06 13_[-1]_67 chrXV:976269-976541 1.1e-06 71_[+1]_9 chrX:390990-391090 1.1e-06 26_[-1]_54 chrIV:1175727-1175994 1.1e-06 24_[+1]_56 chrX:422774-422874 1.1e-06 13_[+1]_67 chrXV:226567-226789 2.4e-06 35_[-1]_45 chrXV:594302-594559 3.2e-06 27_[-1]_53 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DTGGCCVAGTKGKTWARGSG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF DTGGCCVAGTKGKTWARGSG width=20 seqs=125 chrXIII:259114-259349 ( 33) TTGGCCGAGTGGTTAAGGCG 1 chrX:523988-524088 ( 28) TTGGCCGAGTGGTTAAGGCG 1 chrXV:274604-274841 ( 7) GTGGCCGAGTGGTTAAGGCG 1 chrV:86474-86774 ( 36) TTGGCCGAGTGGTTAAGGCG 1 chrIV:980906-981150 ( 52) TTGGCCGAGTGGTTAAGGCG 1 chrIV:1150837-1151044 ( 26) GTGGCCGAGTGGTTAAGGCG 1 chrVII:561622-561841 ( 37) TTGGCCGAGTGGTTAAGGCG 1 chrIV:1305512-1305746 ( 57) TTGGCCGAGTGGTTAAGGCG 1 chrVIII:132951-133214 ( 50) TTGGCCGAGTGGTTAAGGCG 1 chrIV:437662-437921 ( 37) TTGGCCGAGTGGTTAAGGCG 1 chrI:182548-182684 ( 12) TTGGCCGAGTGGTTAAGGCG 1 chrXII:167881-168109 ( 55) TTGGCCGAGTGGTTAAGGCG 1 chrXII:784273-784522 ( 13) GTGGCCGAGTGGTTAAGGCG 1 chrVI:191457-191683 ( 68) GTGGCCGAGTGGTTAAGGCG 1 chrIX:248757-248991 ( 32) ATGGCCGAGTGGTTAAGGCG 1 chrIII:227853-228106 ( 19) ATGGCCGAGTGGTTAAGGCG 1 chrXVI:689490-689677 ( 38) ATGGCCGAGTGGTTAAGGCG 1 chrVIII:116039-116276 ( 47) ATGGCCAAGTTGGTAAGGCG 1 chrXV:354017-354177 ( 41) ATGGCCAAGTTGGTAAGGCG 1 chrIII:295286-295696 ( 49) ATGGCCAAGTTGGTAAGGCG 1 chrXIV:560667-560855 ( 29) ATGGCCAAGTTGGTAAGGCG 1 chrXIV:104687-104933 ( 51) ATGGCCAAGTTGGTAAGGCG 1 chrX:59057-59157 ( 36) ATGGCCAAGTTGGTAAGGCG 1 chrIV:434223-434431 ( 34) ATGGCCAAGTTGGTAAGGCG 1 chrIX:174949-175176 ( 25) ATGGCCAAGTTGGTAAGGCG 1 chrXV:113684-113915 ( 59) ATGGCCAAGTTGGTAAGGCG 1 chrV:551294-551407 ( 33) TTGGCCCAGTTGGTTAAGGC 1 chrIX:183426-183642 ( 4) TTGGCCCAGTTGGTTAAGGC 1 chrXIV:569735-570145 ( 25) TTGGCCCAGTTGGTTAAGGC 1 chrXVI:819389-819633 ( 74) TTGGCCCAGTTGGTTAAGGC 1 chrXII:1051944-1052354 ( 20) TTGGCCCAGTTGGTTAAGGC 1 chrV:443194-443367 ( 20) TTGGCCCAGTTGGTTAAGGC 1 chrXII:592471-592718 ( 50) TTGGCCGAGTGGTTTAAGGC 1 chrXV:228243-228456 ( 38) ATGGCCAAGTTGGTTAAGGC 1 chrXV:487338-487551 ( 51) ATGGCCAAGTTGGTTAAGGC 1 chrXI:74487-74760 ( 57) ATGGCCAAGTTGGTTAAGGC 1 chrVII:731043-731269 ( 37) ATGGCCAAGTTGGTTAAGGC 1 chrXII:975951-976160 ( 26) ATGGCCAAGTTGGTTAAGGC 1 chrIII:127606-127860 ( 39) ATGGCCAAGTTGGTTAAGGC 1 chrVI:137487-137657 ( 12) ATGGCCAAGTTGGTTAAGGC 1 chrXIV:102608-102821 ( 58) ATGGCCAAGTTGGTTAAGGC 1 chrX:424459-424559 ( 5) TTGGCCGAGTGGTCTAAGGC 1 chrXII:962838-963248 ( 37) TTGGCCGAGTGGTCTAAGGC 1 chrVII:794220-794630 ( 48) ATGGCGCAGTTGGTAGCGCG 1 chrV:311851-312261 ( 64) ATGGCGCAGTTGGTAGCGCG 1 chrVII:774230-774473 ( 54) GTGGCGTAGTCGGTAGCGCG 1 chrIV:410180-410590 ( 50) GTGGCGTAGTCGGTAGCGCG 1 chrXII:656806-657216 ( 20) GTGGCGTAGTCGGTAGCGCG 1 chrXI:517865-518088 ( 68) GTGGCGTAGTCGGTAGCGCG 1 chrX:197156-197256 ( 49) GTGGCGTAGTCGGTAGCGCG 1 chrVII:115387-115618 ( 42) TTAGCTCAGTTGGTAGAGCG 1 chrXV:438581-438800 ( 9) TTAGCTCAGTTGGTAGAGCG 1 chrXI:578870-579142 ( 15) TTAGCTCAGTTGGTAGAGCG 1 chrXVI:769166-769437 ( 26) TTAGCTCAGTTGGTAGAGCG 1 chrIV:359466-359759 ( 21) TTAGCTCAGTTGGTAGAGCG 1 chrVII:700842-701156 ( 74) TTAGCTCAGTTGGTAGAGCG 1 chrXI:458445-458720 ( 31) TTGGCCGAGCGGTCTAAGGC 1 chrXIII:504778-504988 ( 68) TTGGCCGAGCGGTCTAAGGC 1 chrVII:857323-857575 ( 67) TTGGCCGAGCGGTCTAAGGC 1 chrVII:205451-205658 ( 23) TTGGCCGAGCGGTCTAAGGC 1 chrXII:628264-628552 ( 31) TTGGCCGAGCGGTCTAAGGC 1 chrIV:1461680-1461944 ( 42) TTGGCCGAGCGGTCTAAGGC 1 chrIV:1352432-1352585 ( 55) TTGGCGCAATCGGTAGCGCG 1 chrXVI:581959-582204 ( 37) TTGGCGCAATCGGTAGCGCG 1 chrVII:122198-122345 ( 54) TTGGCGCAATCGGTAGCGCG 1 chrIX:300200-300354 ( 48) TTGGCGCAATCGGTAGCGCG 1 chrVII:185639-185869 ( 57) TTGGCGCAATCGGTAGCGCG 1 chrXI:202883-203135 ( 46) TTGGCGCAATCGGTAGCGCG 1 chrIV:1201676-1201924 ( 6) TTGGCGCAATCGGTAGCGCG 1 chrVI:226608-226842 ( 60) TTGGCGCAATCGGTAGCGCG 1 chrX:414869-414969 ( 40) TTGGCGCAATCGGTAGCGCG 1 chrVII:876287-876534 ( 40) TTGGCGCAATCGGTAGCGCG 1 chrX:233855-233955 ( 49) GTGGCCCAATGGTCACGGCG 1 chrXI:490752-491162 ( 67) GTGGCCCAATGGTCACGGCG 1 chrV:492316-492518 ( 32) GTGGCCCAATGGTCACGGCG 1 chrXVI:622501-622756 ( 28) TTAGCTCAGTTGGGAGAGCG 1 chrVIII:358426-358641 ( 61) TTAGCTCAGTTGGGAGAGCG 1 chrII:36292-36504 ( 56) TTAGCTCAGTTGGGAGAGCG 1 chrVI:157885-158130 ( 25) TTAGCTCAGTTGGGAGAGCG 1 chrXIV:374797-374965 ( 44) TTAGCTCAGTTGGGAGAGCG 1 chrVII:440660-440945 ( 30) TTAGCTCAGTTGGGAGAGCG 1 chrXIII:352146-352394 ( 66) TTAGCTCAGTTGGGAGAGCG 1 chrXV:980586-980756 ( 60) ATGGGCGTGTGGTCTAGTGG 1 chrVIII:388967-389084 ( 3) ATGGGCGTGTGGTCTAGTGG 1 chrIV:992712-992929 ( 60) GAGCGCAAGTGGTTTAGTGG 1 chrX:531753-531853 ( 25) GAGCGCAAGTGGTTTAGTGG 1 chrXIII:183861-184024 ( 59) TCGCGCAAGTGGTTTAGTGG 1 chrIV:83483-83644 ( 33) TAGCGCAAGTGGTTTAGTGG 1 chrXV:282083-282245 ( 48) GCGCGCAAGTGGTTTAGTGG 1 chrIII:142662-142858 ( 44) TAGCGCAAGTGGTTTAGTGG 1 chrXVI:572214-572336 ( 42) TCGCGCAAGTGGTTTAGTGG 1 chrVII:823375-823639 ( 31) GTGGTCTAGTCGGTTATGGC 1 chrXIII:372447-372625 ( 7) GTGGTCTAGTCGGTTATGGC 1 chrXII:687861-688005 ( 24) GTGGTCTAGTCGGTTATGGC 1 chrVIII:85253-85511 ( 14) GTGGTCTAGTCGGTTATGGC 1 chrV:438600-438824 ( 44) GTGGTCTAGTCGGTTATGGC 1 chrVII:73775-74027 ( 26) GTGGTCTAGTCGGTTATGGC 1 chrXI:379576-379775 ( 61) GTGGTCTAGTCGGTTATGGC 1 chrXV:663771-663974 ( 38) GTGGTCTAGTCGGTTATGGC 1 chrV:61810-62068 ( 54) AAGCGCAAGTGGTTTAGTGG 1 chrVI:162134-162322 ( 48) AAGCGCAAGTGGTTTAGTGG 1 chrX:396721-396821 ( 42) AAGCGCAAGTGGTTTAGTGG 1 chrVII:930913-931117 ( 41) AAGCGCAAGTGGTTTAGTGG 1 chrXVI:860317-860483 ( 27) AAGCGCAAGTGGTTTAGTGG 1 chrVI:180831-181241 ( 41) AAGCGCAAGTGGTTTAGTGG 1 chrXV:300996-301179 ( 58) TCGGGCGTGTGGTCTAGTGG 1 chrXIV:546964-547199 ( 61) TCGGGCGTGTGGTCTAGTGG 1 chrVI:101315-101443 ( 45) TCGGGCGTGTGGTCTAGTGG 1 chrXIV:568010-568247 ( 35) TCGGGCGTGTGGTCTAGTGG 1 chrXII:92459-92644 ( 45) AAGGGCGTGTGGTCTAGTGG 1 chrXV:464353-464516 ( 64) AAGGGCGTGTGGTCTAGTGG 1 chrXIII:196040-196309 ( 29) AAGGGCGTGTGGTCTAGTGG 1 chrI:139046-139268 ( 43) ACGGGCGTGTGGTCTAGTGG 1 chrXV:288092-288295 ( 55) GTAGCCAAGTTGGTTTAAGG 1 chrXIII:168592-169002 ( 54) GTAGCCAAGTTGGTTTAAGG 1 chrIV:946181-946434 ( 61) GTAGCCAAGTTGGTTTAAGG 1 chrXIII:837787-838047 ( 67) GTAGCCAAGTTGGTTTAAGG 1 chrX:542926-543026 ( 29) GTAGCCAAGTTGGTTTAAGG 1 chrXIII:572862-573071 ( 14) GTAGCTCAGTAGGAAGAGCG 1 chrXV:976269-976541 ( 72) GTAGCTCAGTAGGAAGAGCG 1 chrX:390990-391090 ( 27) GTAGCTCAGTAGGAAGAGCG 1 chrIV:1175727-1175994 ( 25) GTAGCTCAGTAGGAAGAGCG 1 chrX:422774-422874 ( 14) GTAGCTCAGTAGGAAGAGCG 1 chrXV:226567-226789 ( 36) CAGCGCAAGTGGTTTAGTGG 1 chrXV:594302-594559 ( 28) ACGCGCAAGTGGTTCAGTGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DTGGCCVAGTKGKTWARGSG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 48438 bayes= 9.90128 E= 1.2e-375 -15 -456 48 53 -147 -139 -1361 139 -76 -1361 211 -1361 -1361 -66 222 -1361 -1361 196 8 -228 -1361 193 -48 -111 -7 72 61 -158 157 -1361 -1361 -196 -158 -1361 224 -1361 -1361 -198 -1361 161 -296 -4 119 15 -1361 -1361 240 -1361 -1361 -1361 159 48 -296 -17 -176 124 72 -456 -1361 63 108 -298 57 -296 24 -48 119 -228 -296 -1361 201 -64 -1361 144 137 -1361 -1361 39 199 -1361 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DTGGCCVAGTKGKTWARGSG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 125 E= 1.2e-375 0.280000 0.008000 0.264000 0.448000 0.112000 0.072000 0.000000 0.816000 0.184000 0.000000 0.816000 0.000000 0.000000 0.120000 0.880000 0.000000 0.000000 0.736000 0.200000 0.064000 0.000000 0.720000 0.136000 0.144000 0.296000 0.312000 0.288000 0.104000 0.920000 0.000000 0.000000 0.080000 0.104000 0.000000 0.896000 0.000000 0.000000 0.048000 0.000000 0.952000 0.040000 0.184000 0.432000 0.344000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.568000 0.432000 0.040000 0.168000 0.056000 0.736000 0.512000 0.008000 0.000000 0.480000 0.656000 0.024000 0.280000 0.040000 0.368000 0.136000 0.432000 0.064000 0.040000 0.000000 0.760000 0.200000 0.000000 0.512000 0.488000 0.000000 0.000000 0.248000 0.752000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DTGGCCVAGTKGKTWARGSG MEME-1 regular expression -------------------------------------------------------------------------------- [TAG]TGG[CG]C[CAG]AGT[GT]G[GT]T[AT][AG][GA][GT][CG][GC] -------------------------------------------------------------------------------- Time 351.65 secs. ******************************************************************************** ******************************************************************************** MOTIF SGGRVTCGAACCCVKGACCYY MEME-2 width = 21 sites = 65 llr = 1196 E-value = 1.5e-232 ******************************************************************************** -------------------------------------------------------------------------------- Motif SGGRVTCGAACCCVKGACCYY MEME-2 Description -------------------------------------------------------------------------------- Simplified A :2:54:::aa:::3:36:1:1 pos.-specific C 4:::2:8:::a8741::7734 probability G 68a52::a::::33471:1:: matrix T ::::1a2::::2::5:23165 bits 2.4 * * 2.2 * * * 1.9 * * * 1.7 * ****** Relative 1.4 * * ******* Entropy 1.2 *** ******** * * (26.6 bits) 1.0 **** ******** * ** 0.7 **** ******** * *** 0.5 **** **************** 0.2 ********************* 0.0 --------------------- Multilevel GGGGATCGAACCCCTGACCTT consensus CA AG GAGATT CC sequence C G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRVTCGAACCCVKGACCYY MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrIV:1352432-1352585 + 18 1.96e-11 AGCCCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrXVI:581959-582204 - 73 1.96e-11 CCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrIX:300200-300354 + 11 1.96e-11 AGCCCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrVII:185639-185869 + 20 1.96e-11 AGCCCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrIV:1201676-1201924 - 42 1.96e-11 AGCCCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrVI:226608-226842 + 23 1.96e-11 AGCCCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrXIII:480561-480667 + 67 1.96e-11 AGCCCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrX:414869-414969 - 76 1.96e-11 GTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrVII:876287-876534 - 76 1.96e-11 GTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrV:311851-312261 + 27 6.18e-11 TGGACGCAAC CGGAATCGAACCGATGACCTC TTCCTTGCAA chrII:197397-197754 - 12 9.61e-11 TGGTCTCTAG CGGGATCGAACCGCTGATCCC CGCGTTATTA chrXII:734794-734939 - 29 9.61e-11 TGGTCTCTAG CGGGATCGAACCGCTGATCCC CGCGTTATTA chrIV:667924-668092 + 59 9.61e-11 TGGTCTCTAG CGGGATCGAACCGCTGATCCC CGCGTTATTA chrXV:438581-438800 - 68 1.11e-10 CTCCTCATAG GGGGCTCGAACCCCTGACATT TCGGTATCCT chrXI:578870-579142 - 74 1.11e-10 TCATAG GGGGCTCGAACCCCTGACATT TCGGTATCCT chrIV:359466-359759 - 80 1.11e-10 . GGGGCTCGAACCCCTGACATT TCGGTATCCT chrVII:700842-701156 + 14 1.11e-10 CTCCTCATAG GGGGCTCGAACCCCTGACATT TCGGTATCCT chrIX:197505-197708 - 77 1.90e-10 GCG GGGAGTCGAACCCCGGTCTCC ACGGTGAGAA chrVII:541752-541994 - 68 1.90e-10 CTCCGATACG GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrV:177044-177228 - 54 1.90e-10 CTCCGATACG GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrVII:779530-779741 - 72 1.90e-10 AGCGGTAC GAGAATCGAACCCGTGTCCCC ACCTTGGAAG chrXIV:96183-96359 + 30 1.90e-10 TGAGCGGTAC GAGAATCGAACCCGTGTCCCC ACCTTGGAAG chrXV:110867-111130 + 24 1.90e-10 TGAGCGGTAC GAGAATCGAACCCGTGTCCCC ACCTTGGAAG chrX:115848-115948 + 23 1.90e-10 CTCCGATACG GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrII:645095-645263 - 79 1.90e-10 G GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrIV:1017159-1017362 + 7 1.90e-10 GAAGCG GGGAGTCGAACCCCGGTCTCC ACGGTGAGAA chrXI:140961-141133 + 31 1.90e-10 CTCCGATACG GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrVIII:475670-475849 + 7 2.48e-10 CCAACC GAGGATCGAACTCGGGACCTT TGCCGTGTGA chrIV:1075402-1075641 + 11 2.48e-10 TGTTCCAACC GAGGATCGAACTCGGGACCTT TGCCGTGTGA chrXIII:747848-748016 + 20 2.82e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrIV:568792-569022 - 66 2.82e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrVII:405404-405615 - 52 2.82e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrVII:828640-828896 + 15 2.82e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrVII:736280-736485 - 49 2.82e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrV:138575-138813 - 63 2.82e-10 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrV:61810-62068 + 11 1.03e-09 TGCGCAAGCC CGGAATCGAACCGGGGGCCCA ACGATGGCAA chrX:531753-531853 - 67 1.03e-09 TGCGCAAGCC CGGAATCGAACCGGGGGCCCA ACGATGGCAA chrXIII:183861-184024 + 16 1.03e-09 TGCGCAAGCC CGGAATCGAACCGGGGGCCCA ACGATGGCAA chrIV:83483-83644 - 75 1.03e-09 AAGCC CGGAATCGAACCGGGGGCCCA ACGATGGCAA chrVIII:146050-146460 + 47 1.03e-09 TGGACGAGTC CGGAATCGAACCGGAGACCTC TCCCATGCTA chrIII:142662-142858 + 1 1.03e-09 . CGGAATCGAACCGGGGGCCCA ACGATGGCAA chrXVI:860317-860483 - 69 1.03e-09 TGCGCAAGCC CGGAATCGAACCGGGGGCCCA ACGATGGCAA chrX:197156-197256 + 12 1.03e-09 TGGACGAGTC CGGAATCGAACCGGAGACCTC TCCCATGCTA chrIV:1256970-1257149 + 9 1.42e-09 CGGAAGCC GGGAATCGAACCCGGGCCCCA TGCTTGGGAA chrXI:46691-46895 + 2 2.37e-09 T GGGAATTGAACCCACGATCCC CGCATTACGA chrXII:818544-818742 - 57 1.01e-08 AGCTCCTCCC GGGACTCGAACCCGGATCACA GCCACCGGAA chrVIII:116039-116276 + 10 1.10e-08 GCTTCCAAT CGGATTTGAACCGATGATCTC CACATTACTA chrXV:354017-354177 + 4 1.10e-08 AAT CGGATTTGAACCGATGATCTC CACATTACTA chrIX:174949-175176 - 61 1.10e-08 TGCTTCCAAT CGGATTTGAACCGATGATCTC CACATTACTA chrVII:823375-823639 - 68 1.19e-08 TGATTTCGCC CAGGATCGAACTGGGGACGTT CTGCGTGTTA chrVIII:358426-358641 + 5 1.19e-08 TTCT GTGGATCGAACACAGGACCTC CAGATAACTT chrXVI:560131-560321 + 32 1.19e-08 TGCGAATTCT GTGGATCGAACACAGGACCTC CAGATAACTT chrII:350732-350951 - 77 1.63e-08 ACC CGGATTCGAACCGGGGTTGTC CGGATCAAAA chrXII:448557-448834 + 15 1.63e-08 AGGTCCTACC CGGATTCGAACCGGGGTTGTC CGGATCAAAA chrIV:1175727-1175994 - 61 2.75e-08 TGCTCCAGGG GAGGTTCGAACTCTCGACCTT CAGATTATGA chrX:422774-422874 - 50 2.75e-08 TGCTCCAGGG GAGGTTCGAACTCTCGACCTT CAGATTATGA chrXV:228243-228456 - 75 2.96e-08 CCAGT GAGGGTTGAACTCACGATCTT GCGATTAACA chrVII:731043-731269 - 74 2.96e-08 CCCAGT GAGGGTTGAACTCACGATCTT GCGATTAACA chrIII:127606-127860 - 76 2.96e-08 CAGT GAGGGTTGAACTCACGATCTT GCGATTAACA chrXIII:808164-808431 + 9 7.02e-08 GTCCCACC CGGATTCGAACTGGGGTTGTT CGGATCAGAA chrXVI:744176-744435 - 70 1.67e-07 TGCCACCTGT CAGAATTGAACTAACGACCTT TGCATTACAA chrVII:1004121-1004358 - 68 1.67e-07 TGCCACCTGT CAGAATTGAACTAACGACCTT TGCATTACAA chrXVI:775698-775945 + 4 2.79e-07 ACT CAGGATCGAACTAAGGACCAA CAGATTTGCA chrXV:571768-572178 - 76 3.72e-07 GACG GGGAATTGAACCCCGATCTGG CACGCGACAA chrI:130650-131060 + 68 3.90e-07 TTCACGGTTC CGTGATCGAACCCATTTCTTT GTCCACCACT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRVTCGAACCCVKGACCYY MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:1352432-1352585 2e-11 17_[+2]_62 chrXVI:581959-582204 2e-11 72_[-2]_7 chrIX:300200-300354 2e-11 10_[+2]_69 chrVII:185639-185869 2e-11 19_[+2]_60 chrIV:1201676-1201924 2e-11 41_[-2]_38 chrVI:226608-226842 2e-11 22_[+2]_57 chrXIII:480561-480667 2e-11 66_[+2]_13 chrX:414869-414969 2e-11 75_[-2]_4 chrVII:876287-876534 2e-11 75_[-2]_4 chrV:311851-312261 6.2e-11 26_[+2]_53 chrII:197397-197754 9.6e-11 11_[-2]_68 chrXII:734794-734939 9.6e-11 28_[-2]_51 chrIV:667924-668092 9.6e-11 58_[+2]_21 chrXV:438581-438800 1.1e-10 67_[-2]_12 chrXI:578870-579142 1.1e-10 73_[-2]_6 chrIV:359466-359759 1.1e-10 79_[-2] chrVII:700842-701156 1.1e-10 13_[+2]_66 chrIX:197505-197708 1.9e-10 76_[-2]_3 chrVII:541752-541994 1.9e-10 67_[-2]_12 chrV:177044-177228 1.9e-10 53_[-2]_26 chrVII:779530-779741 1.9e-10 71_[-2]_8 chrXIV:96183-96359 1.9e-10 29_[+2]_50 chrXV:110867-111130 1.9e-10 23_[+2]_56 chrX:115848-115948 1.9e-10 22_[+2]_57 chrII:645095-645263 1.9e-10 78_[-2]_1 chrIV:1017159-1017362 1.9e-10 6_[+2]_73 chrXI:140961-141133 1.9e-10 30_[+2]_49 chrVIII:475670-475849 2.5e-10 6_[+2]_73 chrIV:1075402-1075641 2.5e-10 10_[+2]_69 chrXIII:747848-748016 2.8e-10 19_[+2]_60 chrIV:568792-569022 2.8e-10 65_[-2]_14 chrVII:405404-405615 2.8e-10 51_[-2]_28 chrVII:828640-828896 2.8e-10 14_[+2]_65 chrVII:736280-736485 2.8e-10 48_[-2]_31 chrV:138575-138813 2.8e-10 62_[-2]_17 chrV:61810-62068 1e-09 10_[+2]_69 chrX:531753-531853 1e-09 66_[-2]_13 chrXIII:183861-184024 1e-09 15_[+2]_64 chrIV:83483-83644 1e-09 74_[-2]_5 chrVIII:146050-146460 1e-09 46_[+2]_33 chrIII:142662-142858 1e-09 [+2]_79 chrXVI:860317-860483 1e-09 68_[-2]_11 chrX:197156-197256 1e-09 11_[+2]_68 chrIV:1256970-1257149 1.4e-09 8_[+2]_71 chrXI:46691-46895 2.4e-09 1_[+2]_78 chrXII:818544-818742 1e-08 56_[-2]_23 chrVIII:116039-116276 1.1e-08 9_[+2]_70 chrXV:354017-354177 1.1e-08 3_[+2]_76 chrIX:174949-175176 1.1e-08 60_[-2]_19 chrVII:823375-823639 1.2e-08 67_[-2]_12 chrVIII:358426-358641 1.2e-08 4_[+2]_75 chrXVI:560131-560321 1.2e-08 31_[+2]_48 chrII:350732-350951 1.6e-08 76_[-2]_3 chrXII:448557-448834 1.6e-08 14_[+2]_65 chrIV:1175727-1175994 2.8e-08 60_[-2]_19 chrX:422774-422874 2.8e-08 49_[-2]_30 chrXV:228243-228456 3e-08 74_[-2]_5 chrVII:731043-731269 3e-08 73_[-2]_6 chrIII:127606-127860 3e-08 75_[-2]_4 chrXIII:808164-808431 7e-08 8_[+2]_71 chrXVI:744176-744435 1.7e-07 69_[-2]_10 chrVII:1004121-1004358 1.7e-07 67_[-2]_12 chrXVI:775698-775945 2.8e-07 3_[+2]_76 chrXV:571768-572178 3.7e-07 75_[-2]_4 chrI:130650-131060 3.9e-07 67_[+2]_12 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRVTCGAACCCVKGACCYY MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SGGRVTCGAACCCVKGACCYY width=21 seqs=65 chrIV:1352432-1352585 ( 18) GGGGCTCGAACCCCTAACCTT 1 chrXVI:581959-582204 ( 73) GGGGCTCGAACCCCTAACCTT 1 chrIX:300200-300354 ( 11) GGGGCTCGAACCCCTAACCTT 1 chrVII:185639-185869 ( 20) GGGGCTCGAACCCCTAACCTT 1 chrIV:1201676-1201924 ( 42) GGGGCTCGAACCCCTAACCTT 1 chrVI:226608-226842 ( 23) GGGGCTCGAACCCCTAACCTT 1 chrXIII:480561-480667 ( 67) GGGGCTCGAACCCCTAACCTT 1 chrX:414869-414969 ( 76) GGGGCTCGAACCCCTAACCTT 1 chrVII:876287-876534 ( 76) GGGGCTCGAACCCCTAACCTT 1 chrV:311851-312261 ( 27) CGGAATCGAACCGATGACCTC 1 chrII:197397-197754 ( 12) CGGGATCGAACCGCTGATCCC 1 chrXII:734794-734939 ( 29) CGGGATCGAACCGCTGATCCC 1 chrIV:667924-668092 ( 59) CGGGATCGAACCGCTGATCCC 1 chrXV:438581-438800 ( 68) GGGGCTCGAACCCCTGACATT 1 chrXI:578870-579142 ( 74) GGGGCTCGAACCCCTGACATT 1 chrIV:359466-359759 ( 80) GGGGCTCGAACCCCTGACATT 1 chrVII:700842-701156 ( 14) GGGGCTCGAACCCCTGACATT 1 chrIX:197505-197708 ( 77) GGGAGTCGAACCCCGGTCTCC 1 chrVII:541752-541994 ( 68) GGGAGTCGAACCCCGGTCTCC 1 chrV:177044-177228 ( 54) GGGAGTCGAACCCCGGTCTCC 1 chrVII:779530-779741 ( 72) GAGAATCGAACCCGTGTCCCC 1 chrXIV:96183-96359 ( 30) GAGAATCGAACCCGTGTCCCC 1 chrXV:110867-111130 ( 24) GAGAATCGAACCCGTGTCCCC 1 chrX:115848-115948 ( 23) GGGAGTCGAACCCCGGTCTCC 1 chrII:645095-645263 ( 79) GGGAGTCGAACCCCGGTCTCC 1 chrIV:1017159-1017362 ( 7) GGGAGTCGAACCCCGGTCTCC 1 chrXI:140961-141133 ( 31) GGGAGTCGAACCCCGGTCTCC 1 chrVIII:475670-475849 ( 7) GAGGATCGAACTCGGGACCTT 1 chrIV:1075402-1075641 ( 11) GAGGATCGAACTCGGGACCTT 1 chrXIII:747848-748016 ( 20) GGGGGTCGAACCCATAATCTT 1 chrIV:568792-569022 ( 66) GGGGGTCGAACCCATAATCTT 1 chrVII:405404-405615 ( 52) GGGGGTCGAACCCATAATCTT 1 chrVII:828640-828896 ( 15) GGGGGTCGAACCCATAATCTT 1 chrVII:736280-736485 ( 49) GGGGGTCGAACCCATAATCTT 1 chrV:138575-138813 ( 63) GGGGGTCGAACCCATAATCTT 1 chrV:61810-62068 ( 11) CGGAATCGAACCGGGGGCCCA 1 chrX:531753-531853 ( 67) CGGAATCGAACCGGGGGCCCA 1 chrXIII:183861-184024 ( 16) CGGAATCGAACCGGGGGCCCA 1 chrIV:83483-83644 ( 75) CGGAATCGAACCGGGGGCCCA 1 chrVIII:146050-146460 ( 47) CGGAATCGAACCGGAGACCTC 1 chrIII:142662-142858 ( 1) CGGAATCGAACCGGGGGCCCA 1 chrXVI:860317-860483 ( 69) CGGAATCGAACCGGGGGCCCA 1 chrX:197156-197256 ( 12) CGGAATCGAACCGGAGACCTC 1 chrIV:1256970-1257149 ( 9) GGGAATCGAACCCGGGCCCCA 1 chrXI:46691-46895 ( 2) GGGAATTGAACCCACGATCCC 1 chrXII:818544-818742 ( 57) GGGACTCGAACCCGGATCACA 1 chrVIII:116039-116276 ( 10) CGGATTTGAACCGATGATCTC 1 chrXV:354017-354177 ( 4) CGGATTTGAACCGATGATCTC 1 chrIX:174949-175176 ( 61) CGGATTTGAACCGATGATCTC 1 chrVII:823375-823639 ( 68) CAGGATCGAACTGGGGACGTT 1 chrVIII:358426-358641 ( 5) GTGGATCGAACACAGGACCTC 1 chrXVI:560131-560321 ( 32) GTGGATCGAACACAGGACCTC 1 chrII:350732-350951 ( 77) CGGATTCGAACCGGGGTTGTC 1 chrXII:448557-448834 ( 15) CGGATTCGAACCGGGGTTGTC 1 chrIV:1175727-1175994 ( 61) GAGGTTCGAACTCTCGACCTT 1 chrX:422774-422874 ( 50) GAGGTTCGAACTCTCGACCTT 1 chrXV:228243-228456 ( 75) GAGGGTTGAACTCACGATCTT 1 chrVII:731043-731269 ( 74) GAGGGTTGAACTCACGATCTT 1 chrIII:127606-127860 ( 76) GAGGGTTGAACTCACGATCTT 1 chrXIII:808164-808431 ( 9) CGGATTCGAACTGGGGTTGTT 1 chrXVI:744176-744435 ( 70) CAGAATTGAACTAACGACCTT 1 chrVII:1004121-1004358 ( 68) CAGAATTGAACTAACGACCTT 1 chrXVI:775698-775945 ( 4) CAGGATCGAACTAAGGACCAA 1 chrXV:571768-572178 ( 76) GGGAATTGAACCCCGATCTGG 1 chrI:130650-131060 ( 68) CGTGATCGAACCCATTTCTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRVTCGAACCCVKGACCYY MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 47840 bayes= 9.53949 E= 1.5e-232 -1267 90 177 -1267 -53 -1267 199 -333 -1267 -1267 238 -433 62 -1267 147 -1267 42 19 38 -134 -1267 -1267 -1267 169 -1267 216 -1267 -101 -1267 -1267 240 -1267 169 -1267 -1267 -1267 169 -1267 -1267 -1267 -1267 240 -1267 -1267 -333 205 -1267 -75 -275 181 63 -1267 -1 96 63 -333 -333 -62 102 57 -25 -1267 193 -433 106 -362 -104 -34 -1267 190 -1267 -9 -201 193 -162 -117 -433 84 -362 102 -117 96 -362 62 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRVTCGAACCCVKGACCYY MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 65 E= 1.5e-232 0.000000 0.353846 0.646154 0.000000 0.215385 0.000000 0.753846 0.030769 0.000000 0.000000 0.984615 0.015385 0.476923 0.000000 0.523077 0.000000 0.415385 0.215385 0.246154 0.123077 0.000000 0.000000 0.000000 1.000000 0.000000 0.846154 0.000000 0.153846 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.030769 0.784615 0.000000 0.184615 0.046154 0.661538 0.292308 0.000000 0.307692 0.369231 0.292308 0.030769 0.030769 0.123077 0.384615 0.461538 0.261538 0.000000 0.723077 0.015385 0.646154 0.015385 0.092308 0.246154 0.000000 0.707692 0.000000 0.292308 0.076923 0.723077 0.061538 0.138462 0.015385 0.338462 0.015385 0.630769 0.138462 0.369231 0.015385 0.476923 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRVTCGAACCCVKGACCYY MEME-2 regular expression -------------------------------------------------------------------------------- [GC][GA]G[GA][AGC]TCGAACC[CG][CAG][TG][GA][AT][CT]C[TC][TC] -------------------------------------------------------------------------------- Time 660.66 secs. ******************************************************************************** ******************************************************************************** MOTIF ASBBVAMRKBRYWRCCRYTAMRCYAYMSS MEME-3 width = 29 sites = 61 llr = 1057 E-value = 5.2e-166 ******************************************************************************** -------------------------------------------------------------------------------- Motif ASBBVAMRKBRYWRCCRYTAMRCYAYMSS MEME-3 Description -------------------------------------------------------------------------------- Simplified A 8:::4643::4:46::7::735::81311 pos.-specific C :3442132:4231:9a:3::5:a424424 probability G 25333214343:13::3::315::::245 matrix T :132::2:73174:1::6a::::6:4:2: bits 2.4 * 2.2 * * 1.9 ** * 1.7 ** * * Relative 1.4 ** * * Entropy 1.2 ** * * (25.0 bits) 1.0 * * * **** ** **** * 0.7 ** ** * ************ * 0.5 **** * *** * ************** * 0.2 ********** * **************** 0.0 ----------------------------- Multilevel AGCCAAAGTGATAACCATTACGCTATCGG consensus CTGGGCAGCGCTG GC GAA C CACC sequence GTC T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ASBBVAMRKBRYWRCCRYTAMRCYAYMSS MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrIV:802746-802890 + 3 1.53e-11 AA ACCGAAAGTGATAACCACTACACTATAGG ACCGACAATT chrVIII:134224-134435 - 45 1.53e-11 CCGGATCAAA ACCGAAAGTGATAACCACTACACTATAGG ACCGGAACTT chrXIII:808164-808431 + 39 1.53e-11 TCGGATCAGA ACCGAAAGTGATAACCACTACACTATAGG ACCTTTTTCT chrIV:645147-645317 + 11 1.53e-11 CCGGATCAAA ACCGAAAGTGATAACCACTACACTATAGG ACCGTAACAA chrIII:168245-168532 + 3 1.53e-11 AA ACCGAAAGTGATAACCACTACACTATAGG ACCAGGACTT chrXII:448557-448834 + 45 1.53e-11 CCGGATCAAA ACCGAAAGTGATAACCACTACACTATAGG ACCGGAACTT chrXI:162508-162643 + 2 3.40e-11 A AGTCAGACGCGTTGCCATTACGCCACGCG AGCTAATATT chrXIII:747848-748016 + 50 3.40e-11 TCTGATTAGA AGTCAGACGCGTTGCCATTACGCCACGCG AGCTAGTCAT chrIV:568792-569022 - 28 3.40e-11 TCTGATTAGA AGTCAGACGCGTTGCCATTACGCCACGCG AGCTACTATT chrX:355285-355385 - 46 3.40e-11 TCTGATTAGA AGTCAGACGCGTTGCCATTACGCCACGCG AGCTACTGTT chrVII:405404-405615 - 14 3.40e-11 TCTGATTAGA AGTCAGACGCGTTGCCATTACGCCACGCG AGCTACTGTT chrVII:828640-828896 + 45 3.40e-11 TCTGATTAGA AGTCAGACGCGTTGCCATTACGCCACGCG AGCTACTGTT chrVII:736280-736485 - 11 3.40e-11 TCTGATTAGA AGTCAGACGCGTTGCCATTACGCCACGCG AGCTATTGAA chrV:138575-138813 - 25 3.40e-11 TCTGATTAGA AGTCAGACGCGTTGCCATTACGCCACGCG AGCATTATTT chrVII:878646-878914 + 54 7.08e-11 ATTTAATTGG AGTCGAAAGCTCTACCATTGAGCCACCGC TTCATCTTGA chrX:415893-415993 + 38 7.08e-11 ATTTAATTGG AGTCGAAAGCTCTACCATTGAGCCACCGC TTCAACTTTT chrXIII:379252-379519 + 42 7.08e-11 ATTTAATTGG AGTCGAAAGCTCTACCATTGAGCCACCGC TTCAACTTTT chrVII:287300-287581 + 34 7.08e-11 ATTTAATTGG AGTCGAAAGCTCTACCATTGAGCCACCGC TTCATCTTGA chrXVI:56135-56391 + 30 7.08e-11 ATTTAATTGG AGTCGAAAGCTCTACCATTGAGCCACCGC TTCAACTATT chrXI:302796-303063 - 42 7.08e-11 ATTTAATTGG AGTCGAAAGCTCTACCATTGAGCCACCGC TTCATCTTGG chrVIII:475670-475849 + 38 3.01e-10 TGCCGTGTGA AGGCAACGTGATAGCCGCTACACTATTGG AACAGACTTT chrIV:1075402-1075641 + 42 3.01e-10 TGCCGTGTGA AGGCAACGTGATAGCCGCTACACTATTGG AACAATATTA chrIX:197505-197708 - 39 1.47e-09 CACGGTGAGA ACGTGATGTGATAGCCGTTACACTACATC GGATTTGATT chrIV:1017159-1017362 + 37 1.47e-09 CACGGTGAGA ACGTGATGTGATAGCCGTTACACTACATC GGATTGTACC chrII:350732-350951 - 39 4.03e-09 CCGGATCAAA ACCGAAAGTGATAACCACTACACTATAAA ACCCTTTTAT chrVII:541752-541994 - 30 6.06e-09 CACGGTGAAA GCGTGATGTGATAGCCGTTACACTATATC GGATGGTAAT chrV:177044-177228 - 16 6.06e-09 CACGGTGAAA GCGTGATGTGATAGCCGTTACACTATATC GGATCAAAGT chrIX:370289-370509 - 71 6.06e-09 A GCGTGATGTGATAGCCGTTACACTATATC GGATTATAAT chrVII:401472-401714 + 24 6.06e-09 CACGGTGAAA GCGTGATGTGATAGCCGTTACACTATATC GGAAACAAAT chrV:487300-487503 + 20 6.06e-09 CACGGTGAAA GCGTGATGTGATAGCCGTTACACTATATC GGATTAAATT chrX:115848-115948 + 53 6.06e-09 CACGGTGAAA GCGTGATGTGATAGCCGTTACACTATATC GGATTATAAA chrII:645095-645263 - 41 6.06e-09 CACGGTGAAA GCGTGATGTGATAGCCGTTACACTATATC GGATAATAAC chrXI:140961-141133 + 61 6.06e-09 CACGGTGAAA GCGTGATGTGATAGCCGTTACACTATATC GGATTACAAA chrVII:779530-779741 - 34 9.83e-09 CACCTTGGAA GGGTGGGATGATAACCACTACACTAACCG CCCGGGGTTA chrXIV:96183-96359 + 60 9.83e-09 CACCTTGGAA GGGTGGGATGATAACCACTACACTAACCG CCCATGTGTT chrXV:110867-111130 + 54 9.83e-09 CACCTTGGAA GGGTGGGATGATAACCACTACACTAACCG CCCGGGTTAA chrXIII:463443-463635 - 68 1.08e-08 GACA AGCGCCCATTCTGACCATTAAACTATCAC GGACAAATTT chrX:541302-541402 - 54 1.08e-08 GCACGCGACA AGCGCCCATTCTGACCATTAAACTATCAC GGATTTTCTT chrXV:571768-572178 - 38 1.08e-08 GCACGCGACA AGCGCCCATTCTGACCATTAAACTATCAC GGATTTTAAT chrVII:544533-544756 + 23 1.08e-08 GCACGCGACA AGCGCCCATTCTGACCATTAAACTATCAC GGAAGAAATA chrXII:793711-794121 - 55 1.08e-08 GCACGCGACA AGCGCCCATTCTGACCATTAAACTATCAC GGATTATATT chrIX:324179-324589 + 9 1.08e-08 ACGCGACA AGCGCCCATTCTGACCATTAAACTATCAC GGAATATTAG chrX:204525-204625 - 58 1.08e-08 GCACGCGACA AGCGCCCATTCTGACCATTAAACTATCAC GGATTTTTAT chrVI:162134-162322 + 72 1.30e-08 TAGTGGTAAA ATCCAACGTTGCCATCGTTGGGCCCCCGG chrXV:282083-282245 + 72 1.30e-08 TAGTGGTAAA ATCCAACGTTGCCATCGTTGGGCCCCCGG chrXV:226567-226789 - 3 1.30e-08 TAGTGGTAAA ATCCAACGTTGCCATCGTTGGGCCCCCGG TT chrX:396721-396821 - 9 1.30e-08 TAGTGGTAAA ATCCAACGTTGCCATCGTTGGGCCCCCGG TTCGATTC chrXVI:572214-572336 + 66 1.30e-08 TAGTGGTAAA ATCCAACGTTGCCATCGTTGGGCCCCCGG TTCGAT chrVII:930913-931117 - 8 1.30e-08 TAGTGGTAAA ATCCAACGTTGCCATCGTTGGGCCCCCGG TTCGATT chrVI:180831-181241 - 8 1.30e-08 TAGTGGTAAA ATCCAACGTTGCCATCGTTGGGCCCCCGG TTCGATT chrXVI:744176-744435 - 32 3.89e-08 TTGCATTACA AGTGCAACGCTCTACCACTAAGCTAAGGA GGCTTTTACA chrVII:1004121-1004358 - 30 3.89e-08 TTGCATTACA AGTGCAACGCTCTACCACTAAGCTAAGGA GGCAAACCCT chrVII:661611-661875 - 59 3.89e-08 TTGCATTACA AGTGCAACGCTCTACCACTAAGCTAAGGA GGCAAATTTT chrXVI:775698-775945 + 34 1.17e-07 ACAGATTTGC AATCTGCTGCGCTACCACTGCGCCATACG AGCTTTTGAA chrVII:707061-707289 + 23 1.17e-07 ACAGATTTGC AATCTGCTGCGCTACCACTGCGCCATACG AGCTTGATTT chrVII:441434-441844 - 63 3.62e-07 TGGCTATTC TGGCCAAATTACTACCAGTGAGCCCCCTG TCTCATTTGA chrX:622948-623048 - 63 3.84e-07 GAATTAGTA AGCGGACATCCCTTCCGCTGGGCTCGCCA TCGCAGATAT chrXI:46691-46895 + 32 5.37e-07 CCGCATTACG AGTGCGATGCCTTACCACTTGGCCAAAAG GGCTGAGTAA chrXII:818544-818742 - 19 9.10e-07 AGCCACCGGA AGAATGCATGCTAACCATTGCACTAGAGG AGCATAATAA chrXVI:645355-645732 + 1 1.11e-06 . ACGCCTCCTCCCCGCCCCTGAGCCTTCGG TGGCCGCCGA chrXII:86956-87123 - 38 1.71e-06 GACCAATGAA ATCTGAGGGTATGACTAATAAGCCCCCGC CCGAGTTTCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ASBBVAMRKBRYWRCCRYTAMRCYAYMSS MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:802746-802890 1.5e-11 2_[+3]_69 chrVIII:134224-134435 1.5e-11 44_[-3]_27 chrXIII:808164-808431 1.5e-11 38_[+3]_33 chrIV:645147-645317 1.5e-11 10_[+3]_61 chrIII:168245-168532 1.5e-11 2_[+3]_69 chrXII:448557-448834 1.5e-11 44_[+3]_27 chrXI:162508-162643 3.4e-11 1_[+3]_70 chrXIII:747848-748016 3.4e-11 49_[+3]_22 chrIV:568792-569022 3.4e-11 27_[-3]_44 chrX:355285-355385 3.4e-11 45_[-3]_26 chrVII:405404-405615 3.4e-11 13_[-3]_58 chrVII:828640-828896 3.4e-11 44_[+3]_27 chrVII:736280-736485 3.4e-11 10_[-3]_61 chrV:138575-138813 3.4e-11 24_[-3]_47 chrVII:878646-878914 7.1e-11 53_[+3]_18 chrX:415893-415993 7.1e-11 37_[+3]_34 chrXIII:379252-379519 7.1e-11 41_[+3]_30 chrVII:287300-287581 7.1e-11 33_[+3]_38 chrXVI:56135-56391 7.1e-11 29_[+3]_42 chrXI:302796-303063 7.1e-11 41_[-3]_30 chrVIII:475670-475849 3e-10 37_[+3]_34 chrIV:1075402-1075641 3e-10 41_[+3]_30 chrIX:197505-197708 1.5e-09 38_[-3]_33 chrIV:1017159-1017362 1.5e-09 36_[+3]_35 chrII:350732-350951 4e-09 38_[-3]_33 chrVII:541752-541994 6.1e-09 29_[-3]_42 chrV:177044-177228 6.1e-09 15_[-3]_56 chrIX:370289-370509 6.1e-09 70_[-3]_1 chrVII:401472-401714 6.1e-09 23_[+3]_48 chrV:487300-487503 6.1e-09 19_[+3]_52 chrX:115848-115948 6.1e-09 52_[+3]_19 chrII:645095-645263 6.1e-09 40_[-3]_31 chrXI:140961-141133 6.1e-09 60_[+3]_11 chrVII:779530-779741 9.8e-09 33_[-3]_38 chrXIV:96183-96359 9.8e-09 59_[+3]_12 chrXV:110867-111130 9.8e-09 53_[+3]_18 chrXIII:463443-463635 1.1e-08 67_[-3]_4 chrX:541302-541402 1.1e-08 53_[-3]_18 chrXV:571768-572178 1.1e-08 37_[-3]_34 chrVII:544533-544756 1.1e-08 22_[+3]_49 chrXII:793711-794121 1.1e-08 54_[-3]_17 chrIX:324179-324589 1.1e-08 8_[+3]_63 chrX:204525-204625 1.1e-08 57_[-3]_14 chrVI:162134-162322 1.3e-08 71_[+3] chrXV:282083-282245 1.3e-08 71_[+3] chrXV:226567-226789 1.3e-08 2_[-3]_69 chrX:396721-396821 1.3e-08 8_[-3]_63 chrXVI:572214-572336 1.3e-08 65_[+3]_6 chrVII:930913-931117 1.3e-08 7_[-3]_64 chrVI:180831-181241 1.3e-08 7_[-3]_64 chrXVI:744176-744435 3.9e-08 31_[-3]_40 chrVII:1004121-1004358 3.9e-08 29_[-3]_42 chrVII:661611-661875 3.9e-08 58_[-3]_13 chrXVI:775698-775945 1.2e-07 33_[+3]_38 chrVII:707061-707289 1.2e-07 22_[+3]_49 chrVII:441434-441844 3.6e-07 62_[-3]_9 chrX:622948-623048 3.8e-07 62_[-3]_9 chrXI:46691-46895 5.4e-07 31_[+3]_40 chrXII:818544-818742 9.1e-07 18_[-3]_53 chrXVI:645355-645732 1.1e-06 [+3]_71 chrXII:86956-87123 1.7e-06 37_[-3]_34 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ASBBVAMRKBRYWRCCRYTAMRCYAYMSS MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ASBBVAMRKBRYWRCCRYTAMRCYAYMSS width=29 seqs=61 chrIV:802746-802890 ( 3) ACCGAAAGTGATAACCACTACACTATAGG 1 chrVIII:134224-134435 ( 45) ACCGAAAGTGATAACCACTACACTATAGG 1 chrXIII:808164-808431 ( 39) ACCGAAAGTGATAACCACTACACTATAGG 1 chrIV:645147-645317 ( 11) ACCGAAAGTGATAACCACTACACTATAGG 1 chrIII:168245-168532 ( 3) ACCGAAAGTGATAACCACTACACTATAGG 1 chrXII:448557-448834 ( 45) ACCGAAAGTGATAACCACTACACTATAGG 1 chrXI:162508-162643 ( 2) AGTCAGACGCGTTGCCATTACGCCACGCG 1 chrXIII:747848-748016 ( 50) AGTCAGACGCGTTGCCATTACGCCACGCG 1 chrIV:568792-569022 ( 28) AGTCAGACGCGTTGCCATTACGCCACGCG 1 chrX:355285-355385 ( 46) AGTCAGACGCGTTGCCATTACGCCACGCG 1 chrVII:405404-405615 ( 14) AGTCAGACGCGTTGCCATTACGCCACGCG 1 chrVII:828640-828896 ( 45) AGTCAGACGCGTTGCCATTACGCCACGCG 1 chrVII:736280-736485 ( 11) AGTCAGACGCGTTGCCATTACGCCACGCG 1 chrV:138575-138813 ( 25) AGTCAGACGCGTTGCCATTACGCCACGCG 1 chrVII:878646-878914 ( 54) AGTCGAAAGCTCTACCATTGAGCCACCGC 1 chrX:415893-415993 ( 38) AGTCGAAAGCTCTACCATTGAGCCACCGC 1 chrXIII:379252-379519 ( 42) AGTCGAAAGCTCTACCATTGAGCCACCGC 1 chrVII:287300-287581 ( 34) AGTCGAAAGCTCTACCATTGAGCCACCGC 1 chrXVI:56135-56391 ( 30) AGTCGAAAGCTCTACCATTGAGCCACCGC 1 chrXI:302796-303063 ( 42) AGTCGAAAGCTCTACCATTGAGCCACCGC 1 chrVIII:475670-475849 ( 38) AGGCAACGTGATAGCCGCTACACTATTGG 1 chrIV:1075402-1075641 ( 42) AGGCAACGTGATAGCCGCTACACTATTGG 1 chrIX:197505-197708 ( 39) ACGTGATGTGATAGCCGTTACACTACATC 1 chrIV:1017159-1017362 ( 37) ACGTGATGTGATAGCCGTTACACTACATC 1 chrII:350732-350951 ( 39) ACCGAAAGTGATAACCACTACACTATAAA 1 chrVII:541752-541994 ( 30) GCGTGATGTGATAGCCGTTACACTATATC 1 chrV:177044-177228 ( 16) GCGTGATGTGATAGCCGTTACACTATATC 1 chrIX:370289-370509 ( 71) GCGTGATGTGATAGCCGTTACACTATATC 1 chrVII:401472-401714 ( 24) GCGTGATGTGATAGCCGTTACACTATATC 1 chrV:487300-487503 ( 20) GCGTGATGTGATAGCCGTTACACTATATC 1 chrX:115848-115948 ( 53) GCGTGATGTGATAGCCGTTACACTATATC 1 chrII:645095-645263 ( 41) GCGTGATGTGATAGCCGTTACACTATATC 1 chrXI:140961-141133 ( 61) GCGTGATGTGATAGCCGTTACACTATATC 1 chrVII:779530-779741 ( 34) GGGTGGGATGATAACCACTACACTAACCG 1 chrXIV:96183-96359 ( 60) GGGTGGGATGATAACCACTACACTAACCG 1 chrXV:110867-111130 ( 54) GGGTGGGATGATAACCACTACACTAACCG 1 chrXIII:463443-463635 ( 68) AGCGCCCATTCTGACCATTAAACTATCAC 1 chrX:541302-541402 ( 54) AGCGCCCATTCTGACCATTAAACTATCAC 1 chrXV:571768-572178 ( 38) AGCGCCCATTCTGACCATTAAACTATCAC 1 chrVII:544533-544756 ( 23) AGCGCCCATTCTGACCATTAAACTATCAC 1 chrXII:793711-794121 ( 55) AGCGCCCATTCTGACCATTAAACTATCAC 1 chrIX:324179-324589 ( 9) AGCGCCCATTCTGACCATTAAACTATCAC 1 chrX:204525-204625 ( 58) AGCGCCCATTCTGACCATTAAACTATCAC 1 chrVI:162134-162322 ( 72) ATCCAACGTTGCCATCGTTGGGCCCCCGG 1 chrXV:282083-282245 ( 72) ATCCAACGTTGCCATCGTTGGGCCCCCGG 1 chrXV:226567-226789 ( 3) ATCCAACGTTGCCATCGTTGGGCCCCCGG 1 chrX:396721-396821 ( 9) ATCCAACGTTGCCATCGTTGGGCCCCCGG 1 chrXVI:572214-572336 ( 66) ATCCAACGTTGCCATCGTTGGGCCCCCGG 1 chrVII:930913-931117 ( 8) ATCCAACGTTGCCATCGTTGGGCCCCCGG 1 chrVI:180831-181241 ( 8) ATCCAACGTTGCCATCGTTGGGCCCCCGG 1 chrXVI:744176-744435 ( 32) AGTGCAACGCTCTACCACTAAGCTAAGGA 1 chrVII:1004121-1004358 ( 30) AGTGCAACGCTCTACCACTAAGCTAAGGA 1 chrVII:661611-661875 ( 59) AGTGCAACGCTCTACCACTAAGCTAAGGA 1 chrXVI:775698-775945 ( 34) AATCTGCTGCGCTACCACTGCGCCATACG 1 chrVII:707061-707289 ( 23) AATCTGCTGCGCTACCACTGCGCCATACG 1 chrVII:441434-441844 ( 63) TGGCCAAATTACTACCAGTGAGCCCCCTG 1 chrX:622948-623048 ( 63) AGCGGACATCCCTTCCGCTGGGCTCGCCA 1 chrXI:46691-46895 ( 32) AGTGCGATGCCTTACCACTTGGCCAAAAG 1 chrXII:818544-818742 ( 19) AGAATGCATGCTAACCATTGCACTAGAGG 1 chrXVI:645355-645732 ( 1) ACGCCTCCTCCCCGCCCCTGAGCCTTCGG 1 chrXII:86956-87123 ( 38) ATCTGAGGGTATGACTAATAAGCCCCCGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ASBBVAMRKBRYWRCCRYTAMRCYAYMSS MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 43056 bayes= 8.54962 E= 5.2e-166 137 -1257 -7 -424 -324 64 152 -124 -424 99 56 8 -424 123 72 -44 34 17 86 -266 100 -72 38 -424 46 86 -153 -92 0 6 123 -266 -1257 -1257 86 108 -1257 93 99 -24 34 -7 56 -107 -1257 86 -1257 108 28 -53 -53 21 104 -1257 86 -424 -1257 223 -1257 -144 -1257 238 -1257 -424 108 -353 79 -1257 -424 79 -353 104 -1257 -1257 -1257 169 111 -1257 72 -424 0 152 -36 -1257 66 -1257 143 -1257 -1257 240 -1257 -1257 -1257 123 -1257 84 140 -21 -1257 -424 -144 112 -253 51 15 123 -7 -324 -107 28 123 -79 -192 106 147 -1257 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ASBBVAMRKBRYWRCCRYTAMRCYAYMSS MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 61 E= 5.2e-166 0.803279 0.000000 0.180328 0.016393 0.032787 0.295082 0.540984 0.131148 0.016393 0.377049 0.278689 0.327869 0.016393 0.442623 0.311475 0.229508 0.393443 0.213115 0.344262 0.049180 0.622951 0.114754 0.245902 0.016393 0.426230 0.344262 0.065574 0.163934 0.311475 0.196721 0.442623 0.049180 0.000000 0.000000 0.344262 0.655738 0.000000 0.360656 0.377049 0.262295 0.393443 0.180328 0.278689 0.147541 0.000000 0.344262 0.000000 0.655738 0.377049 0.131148 0.131148 0.360656 0.639344 0.000000 0.344262 0.016393 0.000000 0.885246 0.000000 0.114754 0.000000 0.983607 0.000000 0.016393 0.655738 0.016393 0.327869 0.000000 0.016393 0.327869 0.016393 0.639344 0.000000 0.000000 0.000000 1.000000 0.672131 0.000000 0.311475 0.016393 0.311475 0.540984 0.147541 0.000000 0.491803 0.000000 0.508197 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.442623 0.000000 0.557377 0.819672 0.163934 0.000000 0.016393 0.114754 0.409836 0.032787 0.442623 0.344262 0.442623 0.180328 0.032787 0.147541 0.229508 0.442623 0.180328 0.081967 0.393443 0.524590 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ASBBVAMRKBRYWRCCRYTAMRCYAYMSS MEME-3 regular expression -------------------------------------------------------------------------------- A[GC][CTG][CGT][AGC][AG][AC][GA][TG][GCT][AG][TC][AT][AG]CC[AG][TC]T[AG][CA][GA]C[TC]A[TC][CA][GC][GC] -------------------------------------------------------------------------------- Time 963.45 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:1490017-1490409 7.12e-02 100 chrXIV:586156-586341 5.78e-01 100 chrXV:621614-622024 3.62e-01 100 chrVII:700842-701156 6.51e-12 13_[+2(1.11e-10)]_39_[-1(1.87e-08)]_\ 7 chrXV:444831-445241 3.71e-01 100 chrVI:225066-225439 4.39e-01 100 chrXV:113684-113915 3.84e-07 58_[+1(7.43e-11)]_22 chrI:166259-166669 6.14e-01 100 chrXIII:552562-552972 6.82e-01 100 chrVII:959376-959574 6.05e-01 100 chrII:255615-255902 9.36e-01 100 chrVII:316876-317286 9.29e-01 100 chrIV:1461680-1461944 2.18e-04 41_[-1(2.96e-08)]_39 chrVII:661611-661875 1.06e-04 58_[-3(3.89e-08)]_13 chrIX:141426-141836 9.48e-01 100 chrXV:83180-83410 2.40e-01 100 chrII:680440-680850 3.09e-01 100 chrX:374511-374611 2.48e-01 100 chrXII:638361-638771 5.19e-01 100 chrXIII:352146-352394 4.14e-05 65_[+1(1.35e-07)]_15 chrXII:838108-838297 1.81e-01 100 chrXVI:560131-560321 3.37e-06 31_[+2(1.19e-08)]_48 chrXIII:37645-37974 3.07e-01 100 chrV:364175-364585 4.80e-01 100 chrX:214079-214179 2.38e-01 100 chrV:443194-443367 2.32e-06 19_[-1(2.88e-10)]_61 chrIV:427794-428204 9.64e-01 100 chrXIV:507145-507555 3.10e-01 100 chrVI:180831-181241 8.57e-09 7_[-3(1.30e-08)]_4_[-1(3.53e-07)]_\ 40 chrXIII:632159-632569 6.39e-01 100 chrV:102138-102548 9.48e-01 100 chrX:422774-422874 2.85e-08 13_[+1(1.10e-06)]_16_[-2(2.75e-08)]_\ 30 chrXV:620141-620551 9.24e-01 100 chrVIII:462008-462294 4.02e-01 100 chrVI:191457-191683 3.34e-09 67_[-1(1.29e-11)]_13 chrXVI:822357-822767 6.33e-01 100 chrXIV:102608-102821 1.15e-05 57_[+1(1.30e-09)]_23 chrII:614521-614931 2.62e-01 100 chrXII:374217-374417 4.53e-01 100 chrVII:799689-800099 9.93e-01 100 chrXII:962838-963248 4.50e-06 36_[-1(1.77e-09)]_44 chrXIII:90974-91384 3.17e-01 100 chrX:204525-204625 1.79e-05 57_[-3(1.08e-08)]_14 chrXI:258741-258851 2.36e-01 100 chrXIII:661593-662003 1.93e-01 100 chrXII:638904-639314 8.48e-01 100 chrVII:365354-365764 9.64e-01 100 chrIV:555606-556016 4.89e-01 100 chrXII:818544-818742 6.34e-09 18_[-3(9.10e-07)]_9_[-2(1.01e-08)]_\ 23 chrIII:142025-142435 1.67e-02 12_[+1(1.56e-05)]_68 chrIV:1269915-1270325 9.84e-01 100 chrVII:876287-876534 3.69e-12 39_[+1(4.56e-08)]_16_[-2(1.96e-11)]_\ 4 chrIII:142793-143203 9.25e-01 100 chrXIV:585513-585923 9.85e-01 100 chrX:197156-197256 9.85e-12 11_[+2(1.03e-09)]_16_[-1(1.67e-08)]_\ 32 chrXVI:928351-928761 2.10e-01 100 chrXIII:298014-298288 9.43e-01 100 chrXV:663771-663974 1.93e-04 37_[-1(3.25e-07)]_43 chrVII:317079-317489 5.26e-01 100 chrV:131082-131267 7.71e-02 11_[-1(7.73e-05)]_69 chrVII:255099-255509 9.52e-01 100 chrIV:1468168-1468578 8.38e-01 100 chrI:130433-130843 8.74e-01 100 chrV:117924-118334 4.32e-01 100 chrXVI:860317-860483 1.38e-14 26_[+1(3.53e-07)]_22_[-2(1.03e-09)]_\ 11 chrXIV:568010-568247 3.56e-05 34_[+1(5.26e-07)]_46 chrXII:784273-784522 2.63e-09 12_[+1(1.29e-11)]_68 chrVII:1048623-1049033 5.87e-01 100 chrIV:45756-46166 9.61e-01 100 chrIV:1175727-1175994 2.85e-08 24_[+1(1.10e-06)]_16_[-2(2.75e-08)]_\ 19 chrII:254430-254840 8.63e-01 100 chrXI:140961-141133 6.41e-12 30_[+2(1.90e-10)]_9_[+3(6.06e-09)]_\ 11 chrXIII:551495-551650 9.39e-01 100 chrII:237775-238185 5.33e-01 100 chrVII:227484-227894 8.09e-01 100 chrXIII:5407-5686 1.22e-01 49_[-1(9.39e-05)]_31 chrI:139046-139268 4.64e-05 42_[+1(7.12e-07)]_38 chrXIV:545362-545772 6.56e-01 100 chrXII:167881-168109 3.76e-08 54_[-1(1.29e-11)]_26 chrXIV:778678-779088 9.60e-01 100 chrIV:1256970-1257149 7.44e-09 8_[+2(1.42e-09)]_9_[+3(3.69e-05)]_\ 33 chrII:405882-406292 9.37e-01 100 chrXI:379576-379775 1.36e-04 60_[+1(3.25e-07)]_20 chrIX:129484-129894 9.13e-01 100 chrV:322160-322347 1.52e-01 100 chrV:269148-269558 4.97e-01 100 chrVII:914863-915188 3.09e-01 100 chrVII:439443-439853 8.01e-01 100 chrXI:430982-431392 9.38e-01 100 chrXV:407737-408147 7.41e-01 100 chrXIII:253395-253673 1.31e-01 100 chrXI:24891-25162 3.69e-01 100 chrVII:115485-115895 7.65e-01 100 chrVII:440660-440945 4.04e-04 29_[-1(1.35e-07)]_51 chrIV:1012904-1013314 4.27e-01 100 chrXII:369275-369813 7.91e-01 100 chrVIII:455603-456013 2.37e-01 100 chrV:397546-397956 9.46e-01 100 chrXVI:169575-169985 9.73e-01 100 chrXIV:576038-576215 3.89e-01 100 chrXVI:689490-689677 1.98e-08 37_[+1(3.97e-11)]_43 chrV:284699-284962 2.93e-01 100 chrVII:88569-88979 6.64e-01 100 chrIV:356514-356924 7.78e-02 100 chrXVI:842819-843229 8.56e-01 100 chrXII:370447-370792 4.04e-01 100 chrXII:448557-448834 4.76e-14 14_[+2(1.63e-08)]_9_[+3(1.53e-11)]_\ 27 chrIII:177338-177748 7.29e-01 100 chrV:431233-431468 4.84e-03 40_[-1(4.33e-05)]_40 chrXIII:226141-226551 9.86e-01 100 chrXVI:645355-645732 3.21e-03 [+3(1.11e-06)]_71 chrVII:707061-707289 2.00e-04 22_[+3(1.17e-07)]_49 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chrXIV:374797-374965 2.95e-04 43_[+1(1.35e-07)]_37 chrXIII:288043-288453 2.73e-01 100 chrII:707125-707404 8.56e-01 100 chrVII:736280-736485 3.33e-14 10_[-3(3.40e-11)]_9_[-2(2.82e-10)]_\ 31 chrXIV:63376-63786 8.04e-01 100 chrVII:346143-346350 2.07e-01 100 chrIV:946181-946434 2.72e-03 60_[+1(7.67e-07)]_20 chrXV:620002-620107 7.99e-01 100 chrXII:282509-283260 6.34e-01 100 chrXVI:572226-572636 3.63e-01 100 chrVI:157885-158130 3.68e-04 24_[-1(1.35e-07)]_56 chrIV:130194-130604 9.09e-01 100 chrXIV:443006-443213 3.04e-02 29_[-2(1.80e-05)]_50 chrXII:949789-950199 9.88e-01 100 chrVIII:35469-35879 5.81e-01 100 chrIV:437662-437921 2.17e-07 36_[+1(1.29e-11)]_44 chrXII:92459-92644 4.64e-05 44_[+1(7.12e-07)]_36 chrXI:109358-109768 7.68e-01 100 chrXII:86956-87123 8.04e-04 37_[-3(1.71e-06)]_34 chrXII:951224-951634 2.71e-02 100 chrXIV:229917-230327 7.97e-01 100 chrXII:793711-794121 8.73e-06 54_[-3(1.08e-08)]_17 chrVIII:132951-133214 4.51e-08 49_[-1(1.29e-11)]_31 chrXV:1016773-1017183 4.72e-01 100 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1.90e-03 53_[+1(7.67e-07)]_27 chrXIV:494031-494441 6.61e-01 100 chrVII:401472-401714 3.83e-05 23_[+3(6.06e-09)]_48 chrIII:169055-169175 4.66e-01 100 chrXIII:348216-348694 9.59e-01 100 chrXV:391005-391415 8.27e-02 100 chrXV:226567-226789 8.70e-08 2_[-3(1.30e-08)]_4_[-1(2.39e-06)]_\ 45 chrII:414804-415214 1.47e-01 100 chrVII:483385-483726 5.98e-01 100 chrXIII:298421-298564 7.51e-01 100 chrVI:226608-226842 3.69e-12 22_[+2(1.96e-11)]_16_[-1(4.56e-08)]_\ 21 chrIX:257690-258100 8.12e-01 100 chrXIV:585858-586022 2.50e-01 100 chrXIII:608258-608668 6.77e-01 100 chrXIV:546964-547199 1.77e-05 60_[+1(5.26e-07)]_20 chrXV:841790-842200 5.33e-02 59_[-3(2.46e-05)]_12 chrXV:903945-904210 6.19e-01 100 chrXIII:297132-297451 9.60e-01 100 chrXI:490752-491162 1.73e-06 66_[+1(9.25e-08)]_14 chrXIII:923766-924176 7.09e-01 100 chrXI:578870-579142 6.51e-12 14_[+1(1.87e-08)]_39_[-2(1.11e-10)]_\ 6 chrX:233855-233955 6.24e-07 48_[+1(9.25e-08)]_32 chrIX:316818-317228 8.76e-01 100 chrXV:232026-232436 1.11e-02 31_[-3(2.91e-05)]_40 chrXII:975951-976160 1.15e-05 25_[-1(1.30e-09)]_55 chrIX:183426-183642 4.99e-06 3_[-1(2.88e-10)]_77 chrVII:1004121-1004358 1.10e-08 29_[-3(3.89e-08)]_9_[-2(1.67e-07)]_\ 12 chrXV:709963-710373 5.39e-01 100 chrII:36292-36504 9.06e-05 55_[+1(1.35e-07)]_25 chrIV:1201676-1201924 3.69e-12 5_[+1(4.56e-08)]_16_[-2(1.96e-11)]_\ 38 chrXV:904099-904509 1.25e-01 100 chrXIII:759228-759638 7.17e-02 100 chrX:59057-59157 4.43e-07 35_[-1(7.43e-11)]_45 chrV:422789-423199 9.91e-02 100 chrXV:288092-288295 3.19e-03 54_[+1(7.67e-07)]_26 chrX:172740-172840 8.03e-01 100 chrXIV:739287-739669 6.73e-01 100 chrXII:781458-781868 6.04e-01 100 chrXIV:494232-494642 2.96e-01 100 chrVII:254137-254547 4.13e-01 100 chrV:302907-303317 8.61e-01 100 chrXIV:415290-415700 5.84e-01 100 chrV:551294-551407 1.35e-06 32_[-1(2.88e-10)]_48 chrV:56357-56478 6.83e-01 100 chrXV:438581-438800 6.51e-12 8_[+1(1.87e-08)]_39_[-2(1.11e-10)]_\ 12 chrXI:326921-327115 9.10e-01 100 chrXII:656806-657216 1.28e-05 19_[-1(1.67e-08)]_61 chrXII:576284-576694 7.81e-01 100 chrXII:637006-637416 9.57e-01 100 chrVII:405404-405615 3.33e-14 13_[-3(3.40e-11)]_9_[-2(2.82e-10)]_\ 28 chrXIII:226743-227153 9.26e-01 100 chrXI:159071-159481 5.86e-01 100 chrXI:520545-520955 7.80e-01 100 chrXII:687861-688005 1.36e-04 23_[-1(3.25e-07)]_57 chrX:355285-355385 1.24e-07 45_[-3(3.40e-11)]_26 chrXV:110867-111130 1.89e-12 23_[+2(1.90e-10)]_9_[+3(9.83e-09)]_\ 18 chrXIV:230215-230625 7.51e-01 100 chrII:606406-606816 9.99e-01 100 chrVIII:294303-294713 3.10e-01 100 chrXV:620386-620796 6.07e-02 100 chrXIV:104687-104933 3.84e-07 50_[+1(7.43e-11)]_30 chrXIII:652398-652601 5.58e-01 100 chrXVI:193118-193437 4.74e-01 100 chrIV:892536-892656 4.81e-01 100 chrIV:386210-386620 9.34e-01 100 chrXI:202883-203135 1.76e-04 45_[+1(4.56e-08)]_35 chrVII:731043-731269 1.61e-10 36_[+1(1.30e-09)]_17_[-2(2.96e-08)]_\ 6 chrVII:115387-115618 4.46e-05 41_[+1(1.87e-08)]_39 chrXI:74487-74760 1.83e-06 56_[+1(1.30e-09)]_24 chrVII:205451-205658 1.64e-04 22_[+1(2.96e-08)]_58 chrXV:282083-282245 1.43e-08 47_[+1(2.52e-07)]_4_[+3(1.30e-08)] chrII:681617-681820 5.91e-01 100 chrVII:185639-185869 3.69e-12 19_[+2(1.96e-11)]_16_[-1(4.56e-08)]_\ 24 chrIV:416824-417297 2.92e-01 100 chrIV:1492286-1492696 9.98e-01 100 chrV:141113-141372 9.59e-01 100 chrVII:857323-857575 2.25e-04 66_[-1(2.96e-08)]_14 chrXIII:393351-393761 2.46e-01 100 chrXII:546099-546509 4.82e-01 100 chrXV:977886-978296 2.25e-01 100 chrIV:556128-556538 2.74e-02 43_[+1(8.52e-05)]_37 chrXVI:280940-281181 8.48e-01 100 chrIV:568792-569022 3.33e-14 27_[-3(3.40e-11)]_9_[-2(2.82e-10)]_\ 14 chrVII:287300-287581 5.19e-07 33_[+3(7.08e-11)]_38 chrXV:759163-759573 9.06e-01 100 chrIII:227853-228106 1.37e-08 18_[+1(3.97e-11)]_62 chrV:167161-167571 7.61e-01 100 chrIV:541390-541800 9.38e-01 100 chrVIII:122215-122625 9.41e-01 100 chrXVI:677414-677824 5.37e-01 100 chrXIII:808164-808431 8.25e-14 8_[+2(7.02e-08)]_9_[+3(1.53e-11)]_\ 33 chrXII:228764-229174 8.29e-01 100 chrXIII:504778-504988 8.77e-05 67_[+1(2.96e-08)]_13 chrXV:619033-619566 2.51e-01 100 chrII:376944-377354 2.47e-01 100 chrII:554376-554786 9.51e-01 100 chrXV:1028129-1028539 2.08e-01 100 chrIV:132746-133217 5.81e-01 100 chrIII:221345-221755 7.04e-01 100 chrIV:915102-915460 1.39e-01 100 chrV:423434-423844 2.14e-01 100 chrX:122101-122201 8.55e-01 100 chrXI:230204-230614 6.55e-01 100 chrXVI:173082-173492 3.03e-01 100 chrXIII:626423-626599 6.32e-02 50_[-2(8.22e-05)]_29 chrXIV:631747-632157 4.06e-01 100 chrXVI:377102-377512 9.49e-01 100 chrXIII:747848-748016 3.33e-14 19_[+2(2.82e-10)]_9_[+3(3.40e-11)]_\ 22 chrXV:762039-762378 4.57e-01 100 chrVII:574665-575075 1.25e-01 100 chrII:477255-477665 1.61e-02 1_[+2(7.35e-05)]_78 chrIV:491597-492007 9.64e-01 100 chrI:72829-73239 3.67e-01 100 chrXVI:194228-194431 9.75e-01 100 chrXII:794314-794724 4.77e-01 100 chrVI:220165-220575 1.00e+00 100 chrXIII:572862-573071 1.51e-03 13_[-1(1.10e-06)]_67 chrVIII:358426-358641 3.88e-09 4_[+2(1.19e-08)]_35_[-1(1.35e-07)]_\ 20 chrVII:481191-481326 9.09e-01 100 chrVII:727071-727481 9.37e-01 100 chrX:424459-424559 3.42e-06 4_[-1(1.77e-09)]_76 chrVIII:34522-34932 6.20e-01 100 chrII:197397-197754 3.63e-07 11_[-2(9.61e-11)]_68 chrVIII:555781-556191 1.36e-01 100 chrV:85231-85373 3.84e-01 100 chrV:61234-61442 4.89e-01 100 chrXIII:379252-379519 3.91e-07 41_[+3(7.08e-11)]_30 chrVII:846892-847302 4.28e-01 100 chrXIV:576697-576831 2.44e-01 100 chrV:51898-52308 9.91e-01 100 chrXI:356118-356528 8.66e-02 100 chrXIII:352269-352679 2.08e-01 100 chrXII:646181-646591 7.62e-01 100 chrXII:489129-489539 1.08e-01 100 chrXIV:560667-560855 3.29e-07 28_[-1(7.43e-11)]_52 chrIV:453568-453978 9.65e-01 100 chrII:88234-88402 6.16e-01 100 chrVII:364778-365188 8.58e-01 100 chrVII:561622-561841 1.75e-07 36_[-1(1.29e-11)]_44 chrIV:355142-355552 9.76e-01 100 chrVIII:34764-35174 2.15e-01 100 chrIII:295286-295696 4.93e-08 48_[+1(7.43e-11)]_32 chrIV:1150837-1151044 7.34e-09 25_[-1(1.29e-11)]_55 chrXI:427318-427728 3.85e-01 100 chrXIII:912225-912635 9.32e-01 100 chrVII:845538-845682 5.90e-01 100 chrII:168493-168903 2.69e-01 100 chrXII:366102-366418 9.76e-02 100 chrIV:980906-981150 4.51e-08 51_[-1(1.29e-11)]_29 chrXV:354017-354177 2.07e-12 3_[+2(1.10e-08)]_16_[-1(7.43e-11)]_\ 40 chrXVI:775698-775945 2.98e-08 3_[+2(2.79e-07)]_9_[+3(1.17e-07)]_\ 38 chrXVI:75012-75227 4.93e-01 100 chrXV:487338-487551 1.02e-05 50_[+1(1.30e-09)]_30 chrX:415893-415993 3.91e-07 37_[+3(7.08e-11)]_34 chrXV:571768-572178 2.69e-09 37_[-3(1.08e-08)]_9_[-2(3.72e-07)]_\ 4 chrVII:345324-345780 4.84e-01 100 chrIV:410180-410590 1.28e-05 49_[+1(1.67e-08)]_31 chrVIII:134224-134435 2.80e-09 44_[-3(1.53e-11)]_27 chrXIII:550694-551104 1.50e-01 100 chrXVI:700432-700842 6.66e-01 100 chrX:622948-623048 5.85e-04 62_[-3(3.84e-07)]_9 chrXIV:303186-303596 3.97e-01 100 chrXII:592471-592718 6.86e-07 49_[-1(4.10e-10)]_31 chrX:75924-76024 5.86e-01 100 chrX:541302-541402 7.53e-06 53_[-3(1.08e-08)]_18 chrVIII:556828-557084 7.08e-01 100 chrV:546108-546518 6.45e-01 100 chrXV:964899-965309 6.32e-01 100 chrXV:96347-96774 7.58e-01 100 chrVII:648175-648585 7.54e-01 100 chrVII:794220-794630 4.25e-06 47_[+1(3.64e-09)]_33 chrXIII:162040-162450 1.27e-01 100 chrXIII:463443-463635 1.81e-05 67_[-3(1.08e-08)]_4 chrXIII:9940-10127 5.35e-01 100 chrXII:257607-258017 8.00e-01 100 chrXV:300996-301179 3.56e-05 57_[+1(5.26e-07)]_23 chrIX:370289-370509 4.66e-05 70_[-3(6.06e-09)]_1 chrVIII:475670-475849 1.14e-13 6_[+2(2.48e-10)]_10_[+3(3.01e-10)]_\ 34 chrIII:162709-163119 7.62e-01 100 chrIV:129993-130403 6.32e-01 100 chrIX:300200-300354 3.69e-12 10_[+2(1.96e-11)]_16_[-1(4.56e-08)]_\ 33 chrXIV:96183-96359 1.89e-12 29_[+2(1.90e-10)]_9_[+3(9.83e-09)]_\ 12 chrIV:802746-802890 3.28e-10 2_[+3(1.53e-11)]_69 chrIV:83483-83644 1.00e-14 32_[+1(2.52e-07)]_22_[-2(1.03e-09)]_\ 5 chrVII:122198-122345 1.76e-04 53_[+1(4.56e-08)]_27 chrI:130650-131060 1.64e-03 67_[+2(3.90e-07)]_12 chrVII:702859-703269 6.38e-01 100 chrXI:326260-326670 3.08e-01 100 chrXVI:744176-744435 2.31e-08 31_[-3(3.89e-08)]_9_[-2(1.67e-07)]_\ 10 chrXIII:183861-184024 1.00e-14 15_[+2(1.03e-09)]_22_[-1(2.52e-07)]_\ 22 chrXV:380753-380952 4.87e-01 100 chrXII:499118-499528 5.57e-01 100 chrXV:445821-446231 6.73e-01 100 chrX:208150-208250 7.47e-01 100 chrVII:878646-878914 5.19e-07 53_[+3(7.08e-11)]_18 chrX:531753-531853 1.00e-14 24_[+1(2.52e-07)]_22_[-2(1.03e-09)]_\ 13 chrXVI:377932-378342 6.24e-01 100 chrX:139305-139405 8.45e-01 100 chrXV:594302-594559 3.37e-06 13_[+3(7.03e-07)]_58 chrXI:259603-260013 7.88e-01 100 chrXIII:372447-372625 1.40e-03 6_[-1(3.25e-07)]_74 chrXV:232234-232644 9.03e-01 100 chrXII:838551-838754 4.98e-02 100 chrIV:449675-449879 9.88e-01 100 chrXII:794894-795160 9.16e-01 100 chrIV:159121-159531 3.59e-01 100 chrXVI:215679-216089 8.83e-01 100 chrVII:823375-823639 4.31e-09 30_[+1(3.25e-07)]_17_[-2(1.19e-08)]_\ 12 chrX:214284-214384 9.35e-01 100 chrXI:327029-327439 9.10e-02 100 chrXIII:880525-880935 5.12e-01 100 chrXIV:462034-462239 8.45e-01 100 chrXVI:770742-771152 6.69e-02 100 chrVIII:116039-116276 2.07e-12 9_[+2(1.10e-08)]_16_[-1(7.43e-11)]_\ 34 chrXII:37019-37256 7.70e-01 100 chrXV:445780-445915 9.82e-01 100 chrV:305673-306083 8.29e-01 100 chrXII:1029537-1029947 5.56e-01 100 chrXII:639975-640178 9.17e-01 100 chrIV:580042-580452 6.73e-02 100 chrVIII:236521-236931 2.53e-01 100 chrXV:109795-110205 5.22e-01 100 chrVII:774230-774473 1.28e-05 53_[+1(1.67e-08)]_27 chrXIII:56604-57014 7.62e-01 100 chrXVI:192254-192664 9.83e-01 100 chrVI:162134-162322 1.94e-08 47_[+1(3.53e-07)]_4_[+3(1.30e-08)] chrIV:562637-563047 1.99e-01 100 chrXI:552104-552514 3.84e-01 100 chrXI:458445-458720 2.25e-04 30_[+1(2.96e-08)]_50 chrI:70438-70848 1.54e-01 100 chrIX:248757-248991 9.21e-09 31_[+1(3.97e-11)]_49 chrV:152124-152534 6.15e-01 100 chrXV:622391-622801 2.76e-02 100 chrXVI:581959-582204 3.69e-12 36_[+1(4.56e-08)]_16_[-2(1.96e-11)]_\ 7 chrV:140453-140863 8.22e-01 100 chrXIII:146750-147160 5.26e-01 100 chrXII:5563-5775 1.10e-01 49_[-1(9.39e-05)]_31 chrXV:383231-383523 7.97e-01 100 chrIV:1489377-1489568 9.88e-01 100 chrXI:283918-284328 8.20e-01 100 chrXVI:642029-642439 9.51e-01 100 chrIX:142409-142819 6.23e-01 100 chrV:86474-86774 9.91e-08 35_[+1(1.29e-11)]_45 chrIV:221442-221852 4.83e-01 100 chrIX:142210-142620 3.72e-01 100 chrVII:545171-545581 4.92e-01 100 chrXII:65522-65673 7.88e-01 100 chrXIII:485263-485673 2.59e-01 100 chrXIV:500386-500704 9.87e-01 100 chrVII:779530-779741 1.89e-12 33_[-3(9.83e-09)]_9_[-2(1.90e-10)]_\ 8 chrII:375569-375979 2.43e-01 100 chrXIV:253730-254140 9.98e-01 100 chrXV:274604-274841 3.59e-10 6_[+1(1.29e-11)]_74 chrVIII:411109-411519 8.51e-01 100 chrXIV:392349-392739 8.97e-01 100 chrXVI:622501-622756 3.25e-04 27_[-1(1.35e-07)]_53 chrIV:1352432-1352585 3.69e-12 17_[+2(1.96e-11)]_16_[-1(4.56e-08)]_\ 26 chrIV:1233678-1234142 6.01e-01 100 chrX:531865-531965 9.96e-01 100 chrIII:221544-221954 3.91e-01 100 chrXIV:229661-230071 6.91e-01 100 chrX:523988-524088 1.62e-09 27_[-1(1.29e-11)]_17_[-3(2.63e-05)]_\ 7 chrV:177044-177228 6.41e-12 15_[-3(6.06e-09)]_9_[-2(1.90e-10)]_\ 26 chrXI:513364-513481 2.97e-01 100 chrV:304198-304608 6.92e-02 38_[+3(5.99e-05)]_33 chrV:140228-140638 6.78e-01 100 chrXI:162508-162643 1.54e-07 1_[+3(3.40e-11)]_70 chrIV:1182880-1183290 1.95e-01 100 chrIV:551314-551724 3.25e-01 100 chrXI:219662-220072 7.61e-02 75_[+1(5.79e-05)]_5 chrX:648879-648979 7.87e-01 100 chrXIII:349286-349696 9.67e-01 100 chrXV:411185-411595 1.66e-01 100 chrXI:284203-284613 8.72e-01 100 chrII:350732-350951 4.94e-11 38_[-3(4.03e-09)]_9_[-2(1.63e-08)]_\ 3 chrVII:541752-541994 6.41e-12 29_[-3(6.06e-09)]_9_[-2(1.90e-10)]_\ 12 chrII:393786-394196 9.86e-01 100 chrIV:992712-992929 5.27e-05 59_[+1(2.52e-07)]_21 chrXV:228243-228456 1.61e-10 37_[+1(1.30e-09)]_17_[-2(2.96e-08)]_\ 5 chrXIII:259114-259349 2.17e-07 32_[-1(1.29e-11)]_48 chrXV:24552-24962 7.97e-01 100 chrXV:382949-383239 9.98e-01 100 chrV:61810-62068 1.38e-14 10_[+2(1.03e-09)]_22_[-1(3.53e-07)]_\ 27 chrXII:546688-547098 3.95e-01 100 chrXIV:619731-620047 4.99e-01 100 chrVII:323353-323636 3.75e-01 100 chrIV:323014-323424 4.74e-01 100 chrXV:797018-797221 3.09e-01 100 chrVIII:294083-294493 9.97e-02 100 chrXI:105377-105787 6.44e-01 100 chrIX:197505-197708 1.67e-12 38_[-3(1.47e-09)]_9_[-2(1.90e-10)]_\ 3 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************