Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.071068 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.069642 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.092958 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.035765 Invoking: fasta-subsample /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/seqs-centered 600 -rest /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/seqs-discarded -seed 1 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/seqs-sampled Finished invoke: name: sample_seqs status: 0 time: 0.084851 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background Finished invoke: name: bg status: 0 time: 0.031607 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 908.488151 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/seqs-shuffled Finished invoke: name: dreme status: 0 time: 82.28008 Invoking: centrimo -seqlen 356 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.205453 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.46867 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background -primary CYYWWMCMACTRSGCCAM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.406201 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background -primary ACACCCRTACAYYHY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.386523 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background -primary TWKTAAYSNGRAGRTCMBSGGTTCGAYYCC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.386592 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background -primary CCACDCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.244433 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background -primary CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.254684 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background -primary TAGTGGTW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.23999 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background -primary ATGGCMA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.264484 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background -primary CTATCACR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.243424 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background -primary GCGCYAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.267843 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background -primary AGAADA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.31991 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background -primary CACCGTGS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.209898 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background -primary GTAKCTCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.215345 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background -primary AAGAGWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.249594 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background -primary RGTCAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.245849 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background -primary AKATTTC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.244459 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/spamo_out_16 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background -primary GCGTGCSA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.216688 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background --motif CYYWWMCMACTRSGCCAM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa Finished invoke: name: fimo1 status: 0 time: 0.204469 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background --motif ACACCCRTACAYYHY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa Finished invoke: name: fimo2 status: 0 time: 0.204728 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background --motif TWKTAAYSNGRAGRTCMBSGGTTCGAYYCC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa Finished invoke: name: fimo3 status: 0 time: 0.215022 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background --motif CCACDCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa Finished invoke: name: fimo4 status: 0 time: 0.108619 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background --motif CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa Finished invoke: name: fimo5 status: 0 time: 0.119802 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background --motif TAGTGGTW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa Finished invoke: name: fimo6 status: 0 time: 0.108928 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background --motif ATGGCMA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa Finished invoke: name: fimo7 status: 0 time: 0.107892 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background --motif CTATCACR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa Finished invoke: name: fimo8 status: 0 time: 0.108778 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background --motif GCGCYAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa Finished invoke: name: fimo9 status: 0 time: 0.107433 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background --motif AGAADA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa Finished invoke: name: fimo10 status: 0 time: 0.092447 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background --motif CACCGTGS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa Finished invoke: name: fimo11 status: 0 time: 0.106389 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background --motif GTAKCTCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa Finished invoke: name: fimo12 status: 0 time: 0.10815 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background --motif AAGAGWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa Finished invoke: name: fimo13 status: 0 time: 0.106743 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background --motif RGTCAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa Finished invoke: name: fimo14 status: 0 time: 0.107567 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background --motif AKATTTC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa Finished invoke: name: fimo15 status: 0 time: 0.091779 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/fimo_out_16 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/background --motif GCGTGCSA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/BY4742--SMP1.fa Finished invoke: name: fimo16 status: 0 time: 0.109079 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--SMP1/summary.tsv Finished invoke: name: summary status: 0 time: 0.169958 Done