Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.011759 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.05471 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.067858 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.012737 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background Finished invoke: name: bg status: 0 time: 0.009254 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 823.578424 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/seqs-shuffled Finished invoke: name: dreme status: 0 time: 74.279457 Invoking: centrimo -seqlen 384 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.182779 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.342834 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background -primary GGYCGAGTGGKTTARKGSDHM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.501758 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background -primary GGRRTCGAACCSVKGAYCYYM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.457845 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background -primary RTGTAYGGRTGTW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.411585 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background -primary CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.30254 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background -primary GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.243041 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background -primary AGTGGTWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.280731 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background -primary ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.252646 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background -primary CACATYAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.246896 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background -primary AACCRACT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.232872 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background -primary AGAAAWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.292072 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background -primary GATTAASA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.228037 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background -primary ATCTKTTG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.23205 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background -primary ATAGTKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.2503 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background -primary ACTRCGCC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.219175 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background -primary ATGGGYGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.22358 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/spamo_out_16 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background -primary AGCGCMAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.230893 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/spamo_out_17 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background -primary CCGTGSA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo17 status: 0 time: 0.224039 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/spamo_out_18 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background -primary TAKCTCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo18 status: 0 time: 0.219942 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/spamo_out_19 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background -primary CACGCGAS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo19 status: 0 time: 0.225929 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background --motif GGYCGAGTGGKTTARKGSDHM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo1 status: 0 time: 0.204516 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background --motif GGRRTCGAACCSVKGAYCYYM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo2 status: 0 time: 0.199091 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background --motif RTGTAYGGRTGTW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo3 status: 0 time: 0.196676 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background --motif CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo4 status: 0 time: 0.101509 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background --motif GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo5 status: 0 time: 0.101945 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background --motif AGTGGTWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo6 status: 0 time: 0.103499 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background --motif ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo7 status: 0 time: 0.100398 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background --motif CACATYAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo8 status: 0 time: 0.101807 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background --motif AACCRACT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo9 status: 0 time: 0.100542 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background --motif AGAAAWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo10 status: 0 time: 0.085633 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background --motif GATTAASA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo11 status: 0 time: 0.100213 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background --motif ATCTKTTG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo12 status: 0 time: 0.100851 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background --motif ATAGTKTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo13 status: 0 time: 0.099969 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background --motif ACTRCGCC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo14 status: 0 time: 0.101437 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background --motif ATGGGYGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo15 status: 0 time: 0.100298 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/fimo_out_16 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background --motif AGCGCMAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo16 status: 0 time: 0.099638 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/fimo_out_17 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background --motif CCGTGSA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo17 status: 0 time: 0.098193 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/fimo_out_18 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background --motif TAKCTCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo18 status: 0 time: 0.098759 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/fimo_out_19 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/background --motif CACGCGAS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo19 status: 0 time: 0.098227 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--RIM101/summary.tsv Finished invoke: name: summary status: 0 time: 0.16911 Done