Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.061727 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.063542 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.09165 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.037092 Invoking: fasta-subsample /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/seqs-centered 600 -rest /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/seqs-discarded -seed 1 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/seqs-sampled Finished invoke: name: sample_seqs status: 0 time: 0.080117 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background Finished invoke: name: bg status: 0 time: 0.013871 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 946.445793 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/seqs-shuffled Finished invoke: name: dreme status: 0 time: 107.151299 Invoking: centrimo -seqlen 350 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.24319 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.536412 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background -primary GYSKRNSSCBYWACCVACTSGGCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.418747 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background -primary ACAYCCRTACAYYWY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.422911 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background -primary WWAWWWGSBSNBDTRGYBTARTGG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.504333 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background -primary GGHTCGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.333116 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background -primary GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.244328 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background -primary TTTCTTB /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.358645 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background -primary CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.275904 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background -primary GTCAKAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.235521 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background -primary AATGGTCW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.249095 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background -primary GCCWTAAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.248085 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background -primary GTGATAGY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.238402 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background -primary ACACTATA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.231805 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background -primary CGSTCTCC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.438836 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background -primary CACGCCC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.250895 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background -primary ACTGAGCT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.241845 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/spamo_out_16 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background -primary CGACWAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.213641 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/spamo_out_17 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background -primary AWAATA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml Finished invoke: name: spamo17 status: 0 time: 0.422531 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/spamo_out_18 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background -primary SAAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml Finished invoke: name: spamo18 status: 0 time: 0.453779 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background --motif GYSKRNSSCBYWACCVACTSGGCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa Finished invoke: name: fimo1 status: 0 time: 0.249066 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background --motif ACAYCCRTACAYYWY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa Finished invoke: name: fimo2 status: 0 time: 0.450058 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background --motif WWAWWWGSBSNBDTRGYBTARTGG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa Finished invoke: name: fimo3 status: 0 time: 0.219637 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background --motif GGHTCGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa Finished invoke: name: fimo4 status: 0 time: 0.151098 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background --motif GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa Finished invoke: name: fimo5 status: 0 time: 0.140203 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background --motif TTTCTTB /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa Finished invoke: name: fimo6 status: 0 time: 0.116794 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background --motif CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa Finished invoke: name: fimo7 status: 0 time: 0.152175 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background --motif GTCAKAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa Finished invoke: name: fimo8 status: 0 time: 0.132436 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background --motif AATGGTCW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa Finished invoke: name: fimo9 status: 0 time: 0.134573 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background --motif GCCWTAAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa Finished invoke: name: fimo10 status: 0 time: 0.146286 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background --motif GTGATAGY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa Finished invoke: name: fimo11 status: 0 time: 0.141753 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background --motif ACACTATA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa Finished invoke: name: fimo12 status: 0 time: 0.149657 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background --motif CGSTCTCC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa Finished invoke: name: fimo13 status: 0 time: 0.161397 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background --motif CACGCCC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa Finished invoke: name: fimo14 status: 0 time: 0.150187 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background --motif ACTGAGCT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa Finished invoke: name: fimo15 status: 0 time: 0.158037 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/fimo_out_16 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background --motif CGACWAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa Finished invoke: name: fimo16 status: 0 time: 0.159375 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/fimo_out_17 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background --motif AWAATA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa Finished invoke: name: fimo17 status: 0 time: 0.118078 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/fimo_out_18 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/background --motif SAAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/BY4742--PDR8.fa Finished invoke: name: fimo18 status: 0 time: 0.128596 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--PDR8/summary.tsv Finished invoke: name: summary status: 0 time: 0.223768 Done