Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.014219 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.057156 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.071756 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.01417 Invoking: fasta-subsample /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/seqs-centered 600 -rest /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/seqs-discarded -seed 1 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/seqs-sampled Finished invoke: name: sample_seqs status: 0 time: 0.066461 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background Finished invoke: name: bg status: 0 time: 0.012146 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 917.254979 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/seqs-shuffled Finished invoke: name: dreme status: 0 time: 139.887306 Invoking: centrimo -seqlen 410 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.211638 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.496669 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -primary BKTGGCBYAGTGGKTWRRGS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.630084 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -primary AYSDDRAGRTCMBSGGTTCGABYCC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.551228 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -primary GRTGTAYGGRTG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.504486 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -primary TTTCTTB /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.443858 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -primary TAAGGCR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.313691 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -primary GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.278762 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -primary ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.30562 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -primary CTATCACR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.283523 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -primary ATCKTGAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.248663 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -primary ATTAASAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.255044 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -primary CTATATCK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.230832 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -primary CCGGWCTC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.23844 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -primary CASACGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.297494 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -primary GKGGCCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.256326 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -primary CCAACWGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.256408 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/spamo_out_16 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -primary CCAGWTCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.248815 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/spamo_out_17 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -primary GGRGATCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: spamo17 status: 0 time: 0.243565 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/spamo_out_18 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -primary AGMATGGG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: spamo18 status: 0 time: 0.265306 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/spamo_out_19 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -primary CGTGYTAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: spamo19 status: 0 time: 0.251801 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/spamo_out_20 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -primary ACTAGAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml Finished invoke: name: spamo20 status: 0 time: 0.266471 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background --motif BKTGGCBYAGTGGKTWRRGS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa Finished invoke: name: fimo1 status: 0 time: 0.240791 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background --motif AYSDDRAGRTCMBSGGTTCGABYCC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa Finished invoke: name: fimo2 status: 0 time: 0.263125 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background --motif GRTGTAYGGRTG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa Finished invoke: name: fimo3 status: 0 time: 0.227388 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background --motif TTTCTTB /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa Finished invoke: name: fimo4 status: 0 time: 0.128391 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background --motif TAAGGCR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa Finished invoke: name: fimo5 status: 0 time: 0.143428 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background --motif GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa Finished invoke: name: fimo6 status: 0 time: 0.144884 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background --motif ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa Finished invoke: name: fimo7 status: 0 time: 0.144106 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background --motif CTATCACR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa Finished invoke: name: fimo8 status: 0 time: 0.144019 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background --motif ATCKTGAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa Finished invoke: name: fimo9 status: 0 time: 0.15367 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background --motif ATTAASAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa Finished invoke: name: fimo10 status: 0 time: 0.146702 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background --motif CTATATCK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa Finished invoke: name: fimo11 status: 0 time: 0.144402 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background --motif CCGGWCTC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa Finished invoke: name: fimo12 status: 0 time: 0.144794 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background --motif CASACGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa Finished invoke: name: fimo13 status: 0 time: 0.142965 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background --motif GKGGCCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa Finished invoke: name: fimo14 status: 0 time: 0.173273 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background --motif CCAACWGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa Finished invoke: name: fimo15 status: 0 time: 0.142731 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/fimo_out_16 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background --motif CCAGWTCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa Finished invoke: name: fimo16 status: 0 time: 0.144679 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/fimo_out_17 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background --motif GGRGATCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa Finished invoke: name: fimo17 status: 0 time: 0.155498 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/fimo_out_18 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background --motif AGMATGGG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa Finished invoke: name: fimo18 status: 0 time: 0.146527 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/fimo_out_19 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background --motif CGTGYTAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa Finished invoke: name: fimo19 status: 0 time: 0.1444 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/fimo_out_20 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background --motif ACTAGAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/BY4742--NRG1.fa Finished invoke: name: fimo20 status: 0 time: 0.14205 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/summary.tsv Finished invoke: name: summary status: 0 time: 0.192901 Done