******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrXII:781439-781856 1.0000 100 chrV:77530-77890 1.0000 100 chrXIV:89845-90255 1.0000 100 chrXIV:102535-102901 1.0000 100 chrI:28535-28839 1.0000 100 chrXII:932051-932504 1.0000 100 chrXII:366061-366498 1.0000 100 chrVIII:17173-17583 1.0000 100 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chrIV:340293-340703 1.0000 100 chrXV:232047-232333 1.0000 100 chrXV:464243-464673 1.0000 100 chrXI:458374-458832 1.0000 100 chrVII:115302-115748 1.0000 100 chrV:69053-69370 1.0000 100 chrXV:1004077-1004450 1.0000 100 chrXII:731904-732309 1.0000 100 chrXV:424172-424616 1.0000 100 chrI:72084-72258 1.0000 100 chrXV:1049118-1049368 1.0000 100 chrI:185684-186046 1.0000 100 chrXV:854033-854443 1.0000 100 chrXIV:721107-721517 1.0000 100 chrVII:766124-766508 1.0000 100 chrIV:1362368-1362564 1.0000 100 chrII:235598-236008 1.0000 100 chrXVI:520140-520552 1.0000 100 chrIV:1352322-1352722 1.0000 100 chrVII:544378-544836 1.0000 100 chrXVI:581870-582269 1.0000 100 chrVII:319593-320029 1.0000 100 chrV:85086-85519 1.0000 100 chrVII:110466-110896 1.0000 100 chrXII:592368-592808 1.0000 100 chrIX:325552-326014 1.0000 100 chrXII:47826-48236 1.0000 100 chrVI:95455-95890 1.0000 100 chrVIII:388752-389198 1.0000 100 chrI:202583-202774 1.0000 100 chrV:569850-570260 1.0000 100 chrIX:257323-257720 1.0000 100 chrII:415487-415880 1.0000 100 chrVII:879485-879895 1.0000 100 chrXV:571772-572167 1.0000 100 chrIII:14371-14829 1.0000 100 chrXIV:302318-302529 1.0000 100 chrV:207132-207584 1.0000 100 chrXIII:751360-751525 1.0000 100 chrXIV:776743-777087 1.0000 100 chrVII:661540-661956 1.0000 100 chrVII:401403-401794 1.0000 100 chrVI:223882-224219 1.0000 100 chrVII:405276-405742 1.0000 100 chrV:221552-221799 1.0000 100 chrXV:796959-797326 1.0000 100 chrIX:316121-316619 1.0000 100 chrV:250101-250513 1.0000 100 chrIV:323029-323275 1.0000 100 chrXV:663654-664060 1.0000 100 chrIII:228532-228942 1.0000 100 chrXIII:923415-923854 1.0000 100 chrII:332313-332756 1.0000 100 chrXV:24529-24967 1.0000 100 chrVII:316916-317326 1.0000 100 chrXV:866553-866985 1.0000 100 chrIV:509233-509643 1.0000 100 chrXVI:453506-453727 1.0000 100 chrXV:977121-977531 1.0000 100 chrXII:1012123-1012391 1.0000 100 chrIX:255330-255740 1.0000 100 chrVII:480114-480668 1.0000 100 chrV:167307-167717 1.0000 100 chrIV:465179-465496 1.0000 100 chrXVI:856715-857108 1.0000 100 chrVII:856685-857040 1.0000 100 chrXV:159733-160148 1.0000 100 chrXIV:739271-739721 1.0000 100 chrXIII:306093-306461 1.0000 100 chrVII:702883-703288 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 587 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 58700 N= 587 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.291 C 0.209 G 0.209 T 0.291 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--NRG1/background): A 0.306 C 0.194 G 0.194 T 0.306 ******************************************************************************** ******************************************************************************** MOTIF BKTGGCBYAGTGGKTWRRGS MEME-1 width = 20 sites = 160 llr = 2034 E-value = 6.0e-316 ******************************************************************************** -------------------------------------------------------------------------------- Motif BKTGGCBYAGTGGKTWRRGS MEME-1 Description -------------------------------------------------------------------------------- Simplified A 12:3:::1a2::::36552: pos.-specific C 4::::743::12:12:1215 probability G 24:7a:22:8:6a5114364 matrix T 34a::334::92:5531111 bits 2.4 * * 2.1 * * 1.9 * * 1.7 * * * * Relative 1.4 * * ** * Entropy 1.2 **** *** * (18.3 bits) 0.9 **** *** * 0.7 **** ****** ** 0.5 ****** ****** ** ** 0.2 ******************** 0.0 -------------------- Multilevel CGTGGCCTAGTGGTTAAAGC consensus TT A TTC A T GATGG G sequence G G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BKTGGCBYAGTGGKTWRRGS MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------- chrIV:1305450-1305852 + 34 1.56e-10 ATTAAGGCAA CTTGGCCGAGTGGTTAAGGC GAAAGATTAG chrI:182399-182831 - 14 1.56e-10 ATTTTGGCAA CTTGGCCGAGTGGTTAAGGC GAAAGATTAG chrIV:437594-437979 + 41 1.56e-10 AGTAAGGCAA CTTGGCCGAGTGGTTAAGGC GAAAGATTAG chrII:226890-227365 + 3 1.56e-10 AA CTTGGCCGAGTGGTTAAGGC GAAAGATTAG chrVIII:132916-133306 - 22 1.56e-10 TAAGTGGCAA CTTGGCCGAGTGGTTAAGGC GAAAGATTAG chrXII:1051957-1052320 - 32 1.96e-09 TTCATGGTCT CTTGGCCCAGTTGGTTAAGG CACCGTGCTA chrXVI:880139-880555 - 48 1.96e-09 ATAATGGTCT CTTGGCCCAGTTGGTTAAGG CACCGTGCTA chrV:551140-551516 - 56 1.96e-09 TTACAGGTCT CTTGGCCCAGTTGGTTAAGG CACCGTGCTA chrXII:734617-734996 + 51 1.96e-09 AGTTTGGTCT CTTGGCCCAGTTGGTTAAGG CACCGTGCTA chrV:443101-443479 - 11 1.96e-09 AATTTGGTCT CTTGGCCCAGTTGGTTAAGG CACCGTGCTA chrVII:738940-739348 + 33 1.96e-09 AAATAGGTCT CTTGGCCCAGTTGGTTAAGG CACCGTGCTA chrXV:274478-274931 + 24 2.43e-09 ATCGTGTCCC AGTGGCCGAGTGGTTAAGGC GATGCCCTGC chrIII:227761-228187 + 23 2.43e-09 GAAATGGCAC TATGGCCGAGTGGTTAAGGC GAGAGACTCG chrVI:191359-191796 - 62 2.43e-09 ATTCTGTCCC AGTGGCCGAGTGGTTAAGGC GATGCCCTGC chrXII:784170-784589 + 30 2.43e-09 CAACCGTCCC AGTGGCCGAGTGGTTAAGGC GATGCCTGCT chrXVI:856715-857108 + 46 3.01e-09 GATTCGGGCG TGTGGCGTAGTCGGTAGCGC GCTCCCTTAG chrXII:592368-592808 - 57 3.01e-09 ACAATGGGAG TTTGGCCGAGTGGTTTAAGG CGTCAGATTT chrXII:731904-732309 + 39 3.01e-09 ACAATGGGAG TTTGGCCGAGTGGTTTAAGG CGTCAGATTT chrVI:204797-205189 - 29 3.01e-09 CGTTCGGGCG TGTGGCGTAGTCGGTAGCGC GCTCCCTTAG chrX:617732-617832 + 31 3.01e-09 ACAATGGGAG TTTGGCCGAGTGGTTTAAGG CGTCAGATTT chrVIII:146060-146497 - 62 3.01e-09 TATCAGGGCG TGTGGCGTAGTCGGTAGCGC GCTCCCTTAG chrIV:410197-410595 + 38 3.01e-09 ATATTGGGCG TGTGGCGTAGTCGGTAGCGC GCTCCCTTAG chrXIII:321007-321380 - 52 3.01e-09 AAATCGGGCG TGTGGCGTAGTCGGTAGCGC GCTCCCTTAG chrXI:219692-220090 + 59 3.01e-09 AAATAGGGCG TGTGGCGTAGTCGGTAGCGC GCTCCCTTAG chrXIII:768209-768624 - 51 3.01e-09 GAAATGGGCG TGTGGCGTAGTCGGTAGCGC GCTCCCTTAG chrX:197186-197286 - 33 3.01e-09 TATTAGGGCG TGTGGCGTAGTCGGTAGCGC GCTCCCTTAG chrXII:656807-657189 - 34 3.01e-09 AAATTGGGCG TGTGGCGTAGTCGGTAGCGC GCTCCCTTAG chrIV:884178-884609 + 23 4.55e-09 AAAATGCTCG TGTAGCTCAGTGGTTAGAGC TTCGTGCTTA chrXII:605165-605607 - 72 4.55e-09 AAATGCTCG TGTAGCTCAGTGGTTAGAGC TTCGTGCTTA chrXV:854033-854443 - 47 8.10e-09 CATCAGGGCA CATGGCGCAGTTGGTAGCGC GCTTCCCTTG chrXI:84018-84404 + 52 8.10e-09 TGTATGGAGG GTTGGCCGAGTGGTCTAAGG CGGCAGACTT chrII:9389-9784 + 52 8.10e-09 TTCGTGGAGG GTTGGCCGAGTGGTCTAAGG CGGCAGACTT chrXII:962848-963249 - 33 8.10e-09 TCGACGGAGG GTTGGCCGAGTGGTCTAAGG CGGCAGACTT chrXIV:726008-726418 - 30 8.10e-09 TCTTTGGAGG GTTGGCCGAGTGGTCTAAGG CGGCAGACTT chrXII:214757-215142 - 32 8.10e-09 TTTTAGGGCA CATGGCGCAGTTGGTAGCGC GCTTCCCTTG chrX:424307-424407 - 32 8.10e-09 AAGATGGAGG GTTGGCCGAGTGGTCTAAGG CGGCAGACTT chrXII:374172-374596 + 26 1.67e-08 TCTTGTTCCT CGTGGCCCAATGGTCACGGC GTCTGGCTAC chrXV:340140-340552 - 51 1.67e-08 ATCTGTTCCT CGTGGCCCAATGGTCACGGC GTCTGGCTAC chrIV:619811-620224 - 50 1.67e-08 TCTTGTTCCT CGTGGCCCAATGGTCACGGC GTCTGGCTAC chrV:492200-492607 - 47 1.67e-08 TCCTATTCCT CGTGGCCCAATGGTCACGGC GTCTGGCTAC chrVII:115302-115748 + 18 3.24e-08 ACTCATCCTT GTTAGCTCAGTTGGTAGAGC GTTCGGCTTT chrXV:438458-438918 + 10 3.24e-08 CTCATCCTT GTTAGCTCAGTTGGTAGAGC GTTCGGCTTT chrXII:875189-875605 + 34 3.24e-08 ACTCATCCTT GTTAGCTCAGTTGGTAGAGC GTTCGGCTTT chrXI:578771-579259 + 5 3.24e-08 CCTT GTTAGCTCAGTTGGTAGAGC GTTCGGCTTT chrIX:325552-326014 + 20 4.44e-08 TACGAGCTTC TATGGCCAAGTTGGTAAGGC GCCACACTAG chrVIII:115929-116379 - 51 4.44e-08 TTAGAGCTTC TATGGCCAAGTTGGTAAGGC GCCACACTAG chrIII:295278-295774 + 13 4.44e-08 ATTAAGCTTC TATGGCCAAGTTGGTAAGGC GCCACACTAG chrIX:174838-175292 + 21 4.44e-08 TACGAGCTTC TATGGCCAAGTTGGTAAGGC GCCACACTAG chrII:266199-266634 + 17 4.44e-08 AAACTGCTTC TATGGCCAAGTTGGTAAGGC GCCACACTAG chrIV:434040-434531 - 77 4.44e-08 CTTC TATGGCCAAGTTGGTAAGGC GCCACACTAG chrXVI:581870-582269 + 48 6.01e-08 AAAGAGCCTT GTTGGCGCAATCGGTAGCGC GTATGACTCT chrIV:1352322-1352722 - 42 6.01e-08 AAATAGCCTT GTTGGCGCAATCGGTAGCGC GTATGACTCT chrV:135228-135688 - 65 6.01e-08 AAAAAGCCTT GTTGGCGCAATCGGTAGCGC GTATGACTCT chrXV:228141-228577 + 27 6.01e-08 TATTAGACTC CATGGCCAAGTTGGTTAAGG CGTGCGACTG chrVII:122104-122529 + 8 6.01e-08 TAGCCTT GTTGGCGCAATCGGTAGCGC GTATGACTCT chrXIII:480479-480869 - 45 6.01e-08 AAGTAGCCTT GTTGGCGCAATCGGTAGCGC GTATGACTCT chrVI:137333-137739 - 49 6.01e-08 TGACTGACTC CATGGCCAAGTTGGTTAAGG CGTGCGACTG chrXI:202808-203248 + 26 6.01e-08 TAAAAGCCTT GTTGGCGCAATCGGTAGCGC GTATGACTCT chrXI:74438-74845 + 38 6.01e-08 AATTAGACTC CATGGCCAAGTTGGTTAAGG CGTGCGACTG chrVII:876211-876646 + 21 6.01e-08 GAATAGCCTT GTTGGCGCAATCGGTAGCGC GTATGACTCT chrXIV:632413-632807 + 44 6.01e-08 AAAGTGACTC CATGGCCAAGTTGGTTAAGG CGTGCGACTG chrXIV:102535-102901 + 53 6.01e-08 TATAAGACTC CATGGCCAAGTTGGTTAAGG CGTGCGACTG chrXV:663654-664060 - 54 8.07e-08 ATAGTGGTTT CGTGGTCTAGTCGGTTATGG CATCTGCTTA chrXI:308010-308403 - 37 8.07e-08 TAAGTGGTTT CGTGGTCTAGTCGGTTATGG CATCTGCTTA chrV:438520-438896 + 47 8.07e-08 AATTAGGTTT CGTGGTCTAGTCGGTTATGG CATCTGCTTA chrXIII:372319-372701 - 34 8.07e-08 AACCTGGTTT CGTGGTCTAGTCGGTTATGG CATCTGCTTA chrXIII:420454-420854 - 33 8.07e-08 TAACAGGTTT CGTGGTCTAGTCGGTTATGG CATCTGCTTA chrV:469273-469665 + 43 8.07e-08 TAATTGGTTT CGTGGTCTAGTCGGTTATGG CATCTGCTTA chrVIII:85188-85554 - 26 8.07e-08 AATTTGGTTT CGTGGTCTAGTCGGTTATGG CATCTGCTTA chrX:378166-378266 + 41 8.07e-08 TAATAGGTTT CGTGGTCTAGTCGGTTATGG CATCTGCTTA chrXI:379498-379870 + 51 8.07e-08 TAATAGGTTT CGTGGTCTAGTCGGTTATGG CATCTGCTTA chrXII:687668-688105 - 72 8.07e-08 AATAGGTTT CGTGGTCTAGTCGGTTATGG CATCTGCTTA chrIV:1095187-1095639 - 74 1.61e-07 TAGCGGA CTTAGCTCAGTTGGGAGAGC GCCAGACTGA chrXIV:374698-375088 + 31 1.61e-07 AATAAGCGGA CTTAGCTCAGTTGGGAGAGC GCCAGACTGA chrXI:458374-458832 + 9 1.84e-07 AGTGGTTG TTTGGCCGAGCGGTCTAAGG CGCCTGATTC chrVII:205338-205756 + 29 1.84e-07 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGG CGCCTGATTC chrI:180955-181434 + 2 1.84e-07 G TTTGGCCGAGCGGTCTAAGG CGCCTGATTC chrXII:628186-628647 + 22 1.84e-07 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGG CGCCTGATTC chrVII:422896-423350 + 24 1.84e-07 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGG CGCCTGATTC chrVII:857246-857661 - 64 1.84e-07 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGG CGCCTGATTC chrIV:1461567-1462030 - 57 1.84e-07 TAAGTGGTTG TTTGGCCGAGCGGTCTAAGG CGCCTGATTC chrVII:440533-441015 - 59 3.05e-07 TATATGCGGA TTTAGCTCAGTTGGGAGAGC GCCAGACTGA chrII:36216-36617 + 37 3.05e-07 TGTAAGCGGA TTTAGCTCAGTTGGGAGAGC GCCAGACTGA chrXVI:560042-560483 - 53 3.05e-07 ATTGAGCGGA TTTAGCTCAGTTGGGAGAGC GCCAGACTGA chrXIII:352092-352484 + 47 3.05e-07 TATAAGCGGA TTTAGCTCAGTTGGGAGAGC GCCAGACTGA chrXVI:622365-622836 - 57 3.05e-07 GATATGCGGA TTTAGCTCAGTTGGGAGAGC GCCAGACTGA chrVIII:358344-358748 - 49 3.05e-07 AGTAAGCGGA TTTAGCTCAGTTGGGAGAGC GCCAGACTGA chrVII:661540-661956 + 56 9.51e-07 AATTTGCCTC CTTAGCTTAGTGGTAGAGCG TTGCACTTGT chrVII:1004049-1004419 + 37 9.51e-07 GGTTTGCCTC CTTAGCTTAGTGGTAGAGCG TTGCACTTGT chrXVI:744105-744501 + 36 9.51e-07 TAAAAGCCTC CTTAGCTTAGTGGTAGAGCG TTGCACTTGT chrX:538367-538467 + 51 9.51e-07 AGTTGGTTCC GTTGGCGTAATGGTAACGCG TCTCCCTCCT chrVIII:466783-467180 + 64 9.51e-07 TTTTAGCCTC CTTAGCTTAGTGGTAGAGCG TTGCACTTGT chrVIII:388752-389198 - 46 1.43e-06 TACATGGGCG TGTGGTCTAGTGGTATGATT CTCGCTTTGG chrXV:464243-464673 + 47 1.43e-06 AACAAGGGCG TGTGGTCTAGTGGTATGATT CTCGCTTTGG chrXV:594230-594615 - 29 1.43e-06 GAAACGCGCA AGTGGTTCAGTGGTTAGAAT TTATGCTTCC chrIII:142605-142953 - 18 1.43e-06 TACTAGCGCA AGTGGTTTAGTGGTAAAATC CAACGTTGCC chrXIV:546906-547361 + 16 1.43e-06 TAATCGGGCG TGTGGTCTAGTGGTATGATT CTCGCTTTGG chrXIII:183774-184147 - 34 1.43e-06 AGATCGCGCA AGTGGTTTAGTGGTAAAATC CAACGTTGCC chrIV:1256902-1257262 - 23 1.43e-06 TCTTAGCGAA AGTGGTTCAGTGGTTAGAAT TCATGCTTCC chrXVI:572083-572539 + 13 1.43e-06 ACTTCGCGCA AGTGGTTTAGTGGTAAAATC CAACGTTGCC chrX:396618-396718 - 24 1.43e-06 AGTAAGCGCA AGTGGTTTAGTGGTAAAATC CAACGTTGCC chrVII:930832-931214 - 26 1.43e-06 AGTAAGCGCA AGTGGTTTAGTGGTAAAATC CAACGTTGCC chrXVI:860196-860582 + 45 1.43e-06 AACAAGCGCA AGTGGTTTAGTGGTAAAATC CAACGTTGCC chrXV:281983-282358 + 49 1.43e-06 AAAGCGCGCA AGTGGTTTAGTGGTAAAATC CAACGTTGCC chrXV:226471-226860 - 42 1.43e-06 ATTCAGCGCA AGTGGTTTAGTGGTAAAATC CAACGTTGCC chrVII:405276-405742 + 16 1.74e-06 CAGTAGCTCG CGTGGCGTAATGGCAACGCG TCTGACTTCT chrVII:828504-828981 - 78 1.74e-06 TCG CGTGGCGTAATGGCAACGCG TCTGACTTCT chrVII:736154-736569 + 34 1.74e-06 CAATAGCTCG CGTGGCGTAATGGCAACGCG TCTGACTTCT chrXIII:131663-132071 - 55 1.74e-06 ATTTAGCTCG CGTGGCGTAATGGCAACGCG TCTGACTTCT chrII:405689-406159 + 9 1.74e-06 GTAGCTCG CGTGGCGTAATGGCAACGCG TCTGACTTCT chrXIII:747768-748141 - 35 1.74e-06 GACTAGCTCG CGTGGCGTAATGGCAACGCG TCTGACTTCT chrXI:162288-162735 - 73 1.74e-06 TTAGCTCG CGTGGCGTAATGGCAACGCG TCTGACTTCT chrXV:976234-976695 + 12 2.32e-06 TGTGCGCTTC AGTAGCTCAGTAGGAAGAGC GTCAGTCTCA chrX:422754-422854 + 35 2.32e-06 TGTATGCTTC AGTAGCTCAGTAGGAAGAGC GTCAGTCTCA chrIV:1175643-1176044 + 41 2.32e-06 ACAAAGCTTC AGTAGCTCAGTAGGAAGAGC GTCAGTCTCA chrX:415820-415920 - 34 3.97e-06 AAGTTGAAGC GGTGGCTCAATGGTAGAGCT TTCGACTCCA chrX:517665-517765 - 50 3.97e-06 AGTTAAGCGC CGTGGCGCAGTGGAAGCGCG CAGGGCTCAT chrVII:878595-878991 - 48 3.97e-06 AAGATGAAGC GGTGGCTCAATGGTAGAGCT TTCGACTCCA chrV:99941-100364 + 36 3.97e-06 GGCTAAGCGC CGTGGCGCAGTGGAAGCGCG CAGGGCTCAT chrVII:287205-287634 - 62 3.97e-06 AAGATGAAGC GGTGGCTCAATGGTAGAGCT TTCGACTCCA chrXI:302733-303183 + 15 3.97e-06 AAGATGAAGC GGTGGCTCAATGGTAGAGCT TTCGACTCCA chrXVI:338724-339098 - 34 3.97e-06 TTAGCAGCGC CGTGGCGCAGTGGAAGCGCG CAGGGCTCAT chrVI:210484-210890 - 46 5.11e-06 AACGACTCTC GGTAGCCAAGTTGGTTTAAG GCGCAAGACT chrXV:288013-288401 + 40 5.11e-06 AGCTTCTCTC GGTAGCCAAGTTGGTTTAAG GCGCAAGACT chrX:354057-354157 + 35 5.11e-06 TATCACTCTC GGTAGCCAAGTTGGTTTAAG GCGCAAGACT chrX:542775-542875 - 64 5.11e-06 AAATACTCTC GGTAGCCAAGTTGGTTTAAG GCGCAAGACT chrXV:83217-83401 + 26 7.04e-06 TTAGAACGGC TACGGCCGAATGGGCAAAGT AATTGCGGAT chrXIV:6564-6936 - 76 7.04e-06 AGTGG TATGGTTGAGTGGGGCAGGG TAACGAGTGG chrV:207132-207584 + 54 7.62e-06 AGTTCGCCAT CTTAGTATAGTGGTTAGTAC ACATCGTTGT chrVII:110466-110896 - 41 7.62e-06 TACCTGCCAT CTTAGTATAGTGGTTAGTAC ACATCGTTGT chrVII:319593-320029 + 25 7.62e-06 AATTAGCCAT CTTAGTATAGTGGTTAGTAC ACATCGTTGT chrXIII:362881-363276 + 41 7.62e-06 AGTTTGCCAT CTTAGTATAGTGGTTAGTAC ACATCGTTGT chrXI:313239-313651 - 53 7.62e-06 TGTTTGCCAT CTTAGTATAGTGGTTAGTAC ACATCGTTGT chrV:250101-250513 + 34 8.22e-06 GTACTGGTCC TATAGTGTAGTGGTTATCAC TTTCGGTTTT chrIV:520788-521168 + 49 8.22e-06 TTTAGGGTCC TATAGTGTAGTGGTTATCAC TTTCGGTTTT chrIII:168160-168570 - 33 8.22e-06 GTCCTGGTCC TATAGTGTAGTGGTTATCAC TTTCGGTTTT chrVIII:134135-134515 + 51 8.22e-06 GTTCCGGTCC TATAGTGTAGTGGTTATCAC TTTCGGTTTT chrI:30-311 - 30 1.19e-05 TTCGGAGTGG TATGGTTGAATGGGACAGGG TAACGAGTGG chrIII:305670-305873 - 30 1.19e-05 TGGCGCGCGG CTCCGTCTAGTGGGATAGGC TTTCAACACA chrXII:1061080-1061248 - 33 1.19e-05 TGACGCGCGG CTCCGTCTAGTGGGATAGGC TTTCAACACA chrIV:720560-720970 - 36 1.37e-05 ATGTTTTTTT GTTTGCCCAGTCGGTTTACG CTAATCAAGA chrIII:137976-138386 + 14 1.47e-05 CAGAAAGGTC GATGGTCAAAAGGTCAAGGC TTCCAAGGAA chrXIV:96053-96504 - 60 1.47e-05 CACATGGGCG GTTAGTGTAGTGGTTATCAT CCCACCCTTC chrII:235598-236008 - 5 1.58e-05 CGGTGGTAAA GGTGGTAAAGCTGGTTCAGC TGCT chrXII:489235-489593 + 32 1.81e-05 TCCGATCAAC TGTAGTTAAGCTGGTAAGAG CCTGACCGAG chrXVI:775652-776023 - 25 1.93e-05 CAAAAGCTCG TATGGCGCAGTGGTAGCGCA GCAGATTGCA chrXIV:631712-632097 - 39 1.93e-05 CTACCGGGCG TGTGGTCTAGAGGTATGATT CTCGCTTAGG chrVII:706949-707373 - 44 1.93e-05 ATCAAGCTCG TATGGCGCAGTGGTAGCGCA GCAGATTGCA chrIII:123428-123820 - 50 1.93e-05 AAGGAGGGCG TGTGGTCTAGAGGTATGATT CTCGCTTAGG chrXV:571772-572167 + 44 2.34e-05 TAAAATCCGT GATAGTTTAATGGTCAGAAT GGGCGCTTGT chrVII:544378-544836 - 67 2.34e-05 TTTCTTCCGT GATAGTTTAATGGTCAGAAT GGGCGCTTGT chrVII:766124-766508 - 48 2.34e-05 ACGGGCTGGC CGCAGCGCAGTCGCCTGCCG CACTAAACCT chrIX:336169-336595 - 64 2.34e-05 ACAAATCCGT GATAGTTTAATGGTCAGAAT GGGCGCTTGT chrIX:324165-324560 - 38 2.34e-05 AATATTCCGT GATAGTTTAATGGTCAGAAT GGGCGCTTGT chrXII:426947-427340 + 44 2.34e-05 TCTTATCCGT GATAGTTTAATGGTCAGAAT GGGCGCTTGT chrVII:531444-531832 + 27 2.34e-05 TTACTTCCGT GATAGTTTAATGGTCAGAAT GGGCGCTTGT chrX:355188-355288 + 58 2.34e-05 TTTCTTCCGT GATAGTTTAATGGTCAGAAT GGGCGCTTGT chrXV:619261-619520 - 20 3.80e-05 CTGAAAATGT TGTGGCACCGCGGCATGAGC GATTCCGCGG chrXV:988459-988869 - 80 4.03e-05 T GTTAGCGGCGACGGTAGCGG CGGCGACACC chrXI:618792-619218 - 30 5.31e-05 CCTCTAATAG ATTTGTGTAGTTGTCTGGGT GCAATCTTTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BKTGGCBYAGTGGKTWRRGS MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:1305450-1305852 1.6e-10 33_[+1]_47 chrI:182399-182831 1.6e-10 13_[-1]_67 chrIV:437594-437979 1.6e-10 40_[+1]_40 chrII:226890-227365 1.6e-10 2_[+1]_78 chrVIII:132916-133306 1.6e-10 21_[-1]_59 chrXII:1051957-1052320 2e-09 31_[-1]_49 chrXVI:880139-880555 2e-09 47_[-1]_33 chrV:551140-551516 2e-09 55_[-1]_25 chrXII:734617-734996 2e-09 50_[+1]_30 chrV:443101-443479 2e-09 10_[-1]_70 chrVII:738940-739348 2e-09 32_[+1]_48 chrXV:274478-274931 2.4e-09 23_[+1]_57 chrIII:227761-228187 2.4e-09 22_[+1]_58 chrVI:191359-191796 2.4e-09 61_[-1]_19 chrXII:784170-784589 2.4e-09 29_[+1]_51 chrXVI:856715-857108 3e-09 45_[+1]_35 chrXII:592368-592808 3e-09 56_[-1]_24 chrXII:731904-732309 3e-09 38_[+1]_42 chrVI:204797-205189 3e-09 28_[-1]_52 chrX:617732-617832 3e-09 30_[+1]_50 chrVIII:146060-146497 3e-09 61_[-1]_19 chrIV:410197-410595 3e-09 37_[+1]_43 chrXIII:321007-321380 3e-09 51_[-1]_29 chrXI:219692-220090 3e-09 58_[+1]_22 chrXIII:768209-768624 3e-09 50_[-1]_30 chrX:197186-197286 3e-09 32_[-1]_48 chrXII:656807-657189 3e-09 33_[-1]_47 chrIV:884178-884609 4.5e-09 22_[+1]_58 chrXII:605165-605607 4.5e-09 71_[-1]_9 chrXV:854033-854443 8.1e-09 46_[-1]_34 chrXI:84018-84404 8.1e-09 51_[+1]_29 chrII:9389-9784 8.1e-09 51_[+1]_29 chrXII:962848-963249 8.1e-09 32_[-1]_48 chrXIV:726008-726418 8.1e-09 29_[-1]_51 chrXII:214757-215142 8.1e-09 31_[-1]_49 chrX:424307-424407 8.1e-09 31_[-1]_49 chrXII:374172-374596 1.7e-08 25_[+1]_55 chrXV:340140-340552 1.7e-08 50_[-1]_30 chrIV:619811-620224 1.7e-08 49_[-1]_31 chrV:492200-492607 1.7e-08 46_[-1]_34 chrVII:115302-115748 3.2e-08 17_[+1]_63 chrXV:438458-438918 3.2e-08 9_[+1]_71 chrXII:875189-875605 3.2e-08 33_[+1]_47 chrXI:578771-579259 3.2e-08 4_[+1]_76 chrIX:325552-326014 4.4e-08 19_[+1]_61 chrVIII:115929-116379 4.4e-08 50_[-1]_30 chrIII:295278-295774 4.4e-08 12_[+1]_68 chrIX:174838-175292 4.4e-08 20_[+1]_60 chrII:266199-266634 4.4e-08 16_[+1]_64 chrIV:434040-434531 4.4e-08 76_[-1]_4 chrXVI:581870-582269 6e-08 47_[+1]_33 chrIV:1352322-1352722 6e-08 41_[-1]_39 chrV:135228-135688 6e-08 64_[-1]_16 chrXV:228141-228577 6e-08 26_[+1]_54 chrVII:122104-122529 6e-08 7_[+1]_73 chrXIII:480479-480869 6e-08 44_[-1]_36 chrVI:137333-137739 6e-08 48_[-1]_32 chrXI:202808-203248 6e-08 25_[+1]_55 chrXI:74438-74845 6e-08 37_[+1]_43 chrVII:876211-876646 6e-08 20_[+1]_60 chrXIV:632413-632807 6e-08 43_[+1]_37 chrXIV:102535-102901 6e-08 52_[+1]_28 chrXV:663654-664060 8.1e-08 53_[-1]_27 chrXI:308010-308403 8.1e-08 36_[-1]_44 chrV:438520-438896 8.1e-08 46_[+1]_34 chrXIII:372319-372701 8.1e-08 33_[-1]_47 chrXIII:420454-420854 8.1e-08 32_[-1]_48 chrV:469273-469665 8.1e-08 42_[+1]_38 chrVIII:85188-85554 8.1e-08 25_[-1]_55 chrX:378166-378266 8.1e-08 40_[+1]_40 chrXI:379498-379870 8.1e-08 50_[+1]_30 chrXII:687668-688105 8.1e-08 71_[-1]_9 chrIV:1095187-1095639 1.6e-07 73_[-1]_7 chrXIV:374698-375088 1.6e-07 30_[+1]_50 chrXI:458374-458832 1.8e-07 8_[+1]_72 chrVII:205338-205756 1.8e-07 28_[+1]_52 chrI:180955-181434 1.8e-07 1_[+1]_79 chrXII:628186-628647 1.8e-07 21_[+1]_59 chrVII:422896-423350 1.8e-07 23_[+1]_57 chrVII:857246-857661 1.8e-07 63_[-1]_17 chrIV:1461567-1462030 1.8e-07 56_[-1]_24 chrVII:440533-441015 3e-07 58_[-1]_22 chrII:36216-36617 3e-07 36_[+1]_44 chrXVI:560042-560483 3e-07 52_[-1]_28 chrXIII:352092-352484 3e-07 46_[+1]_34 chrXVI:622365-622836 3e-07 56_[-1]_24 chrVIII:358344-358748 3e-07 48_[-1]_32 chrVII:661540-661956 9.5e-07 55_[+1]_25 chrVII:1004049-1004419 9.5e-07 36_[+1]_44 chrXVI:744105-744501 9.5e-07 35_[+1]_45 chrX:538367-538467 9.5e-07 50_[+1]_30 chrVIII:466783-467180 9.5e-07 63_[+1]_17 chrVIII:388752-389198 1.4e-06 45_[-1]_35 chrXV:464243-464673 1.4e-06 46_[+1]_34 chrXV:594230-594615 1.4e-06 28_[-1]_52 chrIII:142605-142953 1.4e-06 17_[-1]_63 chrXIV:546906-547361 1.4e-06 15_[+1]_65 chrXIII:183774-184147 1.4e-06 33_[-1]_47 chrIV:1256902-1257262 1.4e-06 22_[-1]_58 chrXVI:572083-572539 1.4e-06 12_[+1]_68 chrX:396618-396718 1.4e-06 23_[-1]_57 chrVII:930832-931214 1.4e-06 25_[-1]_55 chrXVI:860196-860582 1.4e-06 44_[+1]_36 chrXV:281983-282358 1.4e-06 48_[+1]_32 chrXV:226471-226860 1.4e-06 41_[-1]_39 chrVII:405276-405742 1.7e-06 15_[+1]_65 chrVII:828504-828981 1.7e-06 77_[-1]_3 chrVII:736154-736569 1.7e-06 33_[+1]_47 chrXIII:131663-132071 1.7e-06 54_[-1]_26 chrII:405689-406159 1.7e-06 8_[+1]_72 chrXIII:747768-748141 1.7e-06 34_[-1]_46 chrXI:162288-162735 1.7e-06 72_[-1]_8 chrXV:976234-976695 2.3e-06 11_[+1]_69 chrX:422754-422854 2.3e-06 34_[+1]_46 chrIV:1175643-1176044 2.3e-06 40_[+1]_40 chrX:415820-415920 4e-06 33_[-1]_47 chrX:517665-517765 4e-06 49_[-1]_31 chrVII:878595-878991 4e-06 47_[-1]_33 chrV:99941-100364 4e-06 35_[+1]_45 chrVII:287205-287634 4e-06 61_[-1]_19 chrXI:302733-303183 4e-06 14_[+1]_66 chrXVI:338724-339098 4e-06 33_[-1]_47 chrVI:210484-210890 5.1e-06 45_[-1]_35 chrXV:288013-288401 5.1e-06 39_[+1]_41 chrX:354057-354157 5.1e-06 34_[+1]_46 chrX:542775-542875 5.1e-06 63_[-1]_17 chrXV:83217-83401 7e-06 25_[+1]_55 chrXIV:6564-6936 7e-06 75_[-1]_5 chrV:207132-207584 7.6e-06 53_[+1]_27 chrVII:110466-110896 7.6e-06 40_[-1]_40 chrVII:319593-320029 7.6e-06 24_[+1]_56 chrXIII:362881-363276 7.6e-06 40_[+1]_40 chrXI:313239-313651 7.6e-06 52_[-1]_28 chrV:250101-250513 8.2e-06 33_[+1]_47 chrIV:520788-521168 8.2e-06 48_[+1]_32 chrIII:168160-168570 8.2e-06 32_[-1]_48 chrVIII:134135-134515 8.2e-06 50_[+1]_30 chrI:30-311 1.2e-05 29_[-1]_51 chrIII:305670-305873 1.2e-05 29_[-1]_51 chrXII:1061080-1061248 1.2e-05 32_[-1]_48 chrIV:720560-720970 1.4e-05 35_[-1]_45 chrIII:137976-138386 1.5e-05 13_[+1]_67 chrXIV:96053-96504 1.5e-05 59_[-1]_21 chrII:235598-236008 1.6e-05 4_[-1]_76 chrXII:489235-489593 1.8e-05 31_[+1]_49 chrXVI:775652-776023 1.9e-05 24_[-1]_56 chrXIV:631712-632097 1.9e-05 38_[-1]_42 chrVII:706949-707373 1.9e-05 43_[-1]_37 chrIII:123428-123820 1.9e-05 49_[-1]_31 chrXV:571772-572167 2.3e-05 43_[+1]_37 chrVII:544378-544836 2.3e-05 66_[-1]_14 chrVII:766124-766508 2.3e-05 47_[-1]_33 chrIX:336169-336595 2.3e-05 63_[-1]_17 chrIX:324165-324560 2.3e-05 37_[-1]_43 chrXII:426947-427340 2.3e-05 43_[+1]_37 chrVII:531444-531832 2.3e-05 26_[+1]_54 chrX:355188-355288 2.3e-05 57_[+1]_23 chrXV:619261-619520 3.8e-05 19_[-1]_61 chrXV:988459-988869 4e-05 79_[-1]_1 chrXI:618792-619218 5.3e-05 29_[-1]_51 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BKTGGCBYAGTGGKTWRRGS MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF BKTGGCBYAGTGGKTWRRGS width=20 seqs=160 chrIV:1305450-1305852 ( 34) CTTGGCCGAGTGGTTAAGGC 1 chrI:182399-182831 ( 14) CTTGGCCGAGTGGTTAAGGC 1 chrIV:437594-437979 ( 41) CTTGGCCGAGTGGTTAAGGC 1 chrII:226890-227365 ( 3) CTTGGCCGAGTGGTTAAGGC 1 chrVIII:132916-133306 ( 22) CTTGGCCGAGTGGTTAAGGC 1 chrXII:1051957-1052320 ( 32) CTTGGCCCAGTTGGTTAAGG 1 chrXVI:880139-880555 ( 48) CTTGGCCCAGTTGGTTAAGG 1 chrV:551140-551516 ( 56) CTTGGCCCAGTTGGTTAAGG 1 chrXII:734617-734996 ( 51) CTTGGCCCAGTTGGTTAAGG 1 chrV:443101-443479 ( 11) CTTGGCCCAGTTGGTTAAGG 1 chrVII:738940-739348 ( 33) CTTGGCCCAGTTGGTTAAGG 1 chrXV:274478-274931 ( 24) AGTGGCCGAGTGGTTAAGGC 1 chrIII:227761-228187 ( 23) TATGGCCGAGTGGTTAAGGC 1 chrVI:191359-191796 ( 62) AGTGGCCGAGTGGTTAAGGC 1 chrXII:784170-784589 ( 30) AGTGGCCGAGTGGTTAAGGC 1 chrXVI:856715-857108 ( 46) TGTGGCGTAGTCGGTAGCGC 1 chrXII:592368-592808 ( 57) TTTGGCCGAGTGGTTTAAGG 1 chrXII:731904-732309 ( 39) TTTGGCCGAGTGGTTTAAGG 1 chrVI:204797-205189 ( 29) TGTGGCGTAGTCGGTAGCGC 1 chrX:617732-617832 ( 31) TTTGGCCGAGTGGTTTAAGG 1 chrVIII:146060-146497 ( 62) TGTGGCGTAGTCGGTAGCGC 1 chrIV:410197-410595 ( 38) TGTGGCGTAGTCGGTAGCGC 1 chrXIII:321007-321380 ( 52) TGTGGCGTAGTCGGTAGCGC 1 chrXI:219692-220090 ( 59) TGTGGCGTAGTCGGTAGCGC 1 chrXIII:768209-768624 ( 51) TGTGGCGTAGTCGGTAGCGC 1 chrX:197186-197286 ( 33) TGTGGCGTAGTCGGTAGCGC 1 chrXII:656807-657189 ( 34) TGTGGCGTAGTCGGTAGCGC 1 chrIV:884178-884609 ( 23) TGTAGCTCAGTGGTTAGAGC 1 chrXII:605165-605607 ( 72) TGTAGCTCAGTGGTTAGAGC 1 chrXV:854033-854443 ( 47) CATGGCGCAGTTGGTAGCGC 1 chrXI:84018-84404 ( 52) GTTGGCCGAGTGGTCTAAGG 1 chrII:9389-9784 ( 52) GTTGGCCGAGTGGTCTAAGG 1 chrXII:962848-963249 ( 33) GTTGGCCGAGTGGTCTAAGG 1 chrXIV:726008-726418 ( 30) GTTGGCCGAGTGGTCTAAGG 1 chrXII:214757-215142 ( 32) CATGGCGCAGTTGGTAGCGC 1 chrX:424307-424407 ( 32) GTTGGCCGAGTGGTCTAAGG 1 chrXII:374172-374596 ( 26) CGTGGCCCAATGGTCACGGC 1 chrXV:340140-340552 ( 51) CGTGGCCCAATGGTCACGGC 1 chrIV:619811-620224 ( 50) CGTGGCCCAATGGTCACGGC 1 chrV:492200-492607 ( 47) CGTGGCCCAATGGTCACGGC 1 chrVII:115302-115748 ( 18) GTTAGCTCAGTTGGTAGAGC 1 chrXV:438458-438918 ( 10) GTTAGCTCAGTTGGTAGAGC 1 chrXII:875189-875605 ( 34) GTTAGCTCAGTTGGTAGAGC 1 chrXI:578771-579259 ( 5) GTTAGCTCAGTTGGTAGAGC 1 chrIX:325552-326014 ( 20) TATGGCCAAGTTGGTAAGGC 1 chrVIII:115929-116379 ( 51) TATGGCCAAGTTGGTAAGGC 1 chrIII:295278-295774 ( 13) TATGGCCAAGTTGGTAAGGC 1 chrIX:174838-175292 ( 21) TATGGCCAAGTTGGTAAGGC 1 chrII:266199-266634 ( 17) TATGGCCAAGTTGGTAAGGC 1 chrIV:434040-434531 ( 77) TATGGCCAAGTTGGTAAGGC 1 chrXVI:581870-582269 ( 48) GTTGGCGCAATCGGTAGCGC 1 chrIV:1352322-1352722 ( 42) GTTGGCGCAATCGGTAGCGC 1 chrV:135228-135688 ( 65) GTTGGCGCAATCGGTAGCGC 1 chrXV:228141-228577 ( 27) CATGGCCAAGTTGGTTAAGG 1 chrVII:122104-122529 ( 8) GTTGGCGCAATCGGTAGCGC 1 chrXIII:480479-480869 ( 45) GTTGGCGCAATCGGTAGCGC 1 chrVI:137333-137739 ( 49) CATGGCCAAGTTGGTTAAGG 1 chrXI:202808-203248 ( 26) GTTGGCGCAATCGGTAGCGC 1 chrXI:74438-74845 ( 38) CATGGCCAAGTTGGTTAAGG 1 chrVII:876211-876646 ( 21) GTTGGCGCAATCGGTAGCGC 1 chrXIV:632413-632807 ( 44) CATGGCCAAGTTGGTTAAGG 1 chrXIV:102535-102901 ( 53) CATGGCCAAGTTGGTTAAGG 1 chrXV:663654-664060 ( 54) CGTGGTCTAGTCGGTTATGG 1 chrXI:308010-308403 ( 37) CGTGGTCTAGTCGGTTATGG 1 chrV:438520-438896 ( 47) CGTGGTCTAGTCGGTTATGG 1 chrXIII:372319-372701 ( 34) CGTGGTCTAGTCGGTTATGG 1 chrXIII:420454-420854 ( 33) CGTGGTCTAGTCGGTTATGG 1 chrV:469273-469665 ( 43) CGTGGTCTAGTCGGTTATGG 1 chrVIII:85188-85554 ( 26) CGTGGTCTAGTCGGTTATGG 1 chrX:378166-378266 ( 41) CGTGGTCTAGTCGGTTATGG 1 chrXI:379498-379870 ( 51) CGTGGTCTAGTCGGTTATGG 1 chrXII:687668-688105 ( 72) CGTGGTCTAGTCGGTTATGG 1 chrIV:1095187-1095639 ( 74) CTTAGCTCAGTTGGGAGAGC 1 chrXIV:374698-375088 ( 31) CTTAGCTCAGTTGGGAGAGC 1 chrXI:458374-458832 ( 9) TTTGGCCGAGCGGTCTAAGG 1 chrVII:205338-205756 ( 29) TTTGGCCGAGCGGTCTAAGG 1 chrI:180955-181434 ( 2) TTTGGCCGAGCGGTCTAAGG 1 chrXII:628186-628647 ( 22) TTTGGCCGAGCGGTCTAAGG 1 chrVII:422896-423350 ( 24) TTTGGCCGAGCGGTCTAAGG 1 chrVII:857246-857661 ( 64) TTTGGCCGAGCGGTCTAAGG 1 chrIV:1461567-1462030 ( 57) TTTGGCCGAGCGGTCTAAGG 1 chrVII:440533-441015 ( 59) TTTAGCTCAGTTGGGAGAGC 1 chrII:36216-36617 ( 37) TTTAGCTCAGTTGGGAGAGC 1 chrXVI:560042-560483 ( 53) TTTAGCTCAGTTGGGAGAGC 1 chrXIII:352092-352484 ( 47) TTTAGCTCAGTTGGGAGAGC 1 chrXVI:622365-622836 ( 57) TTTAGCTCAGTTGGGAGAGC 1 chrVIII:358344-358748 ( 49) TTTAGCTCAGTTGGGAGAGC 1 chrVII:661540-661956 ( 56) CTTAGCTTAGTGGTAGAGCG 1 chrVII:1004049-1004419 ( 37) CTTAGCTTAGTGGTAGAGCG 1 chrXVI:744105-744501 ( 36) CTTAGCTTAGTGGTAGAGCG 1 chrX:538367-538467 ( 51) GTTGGCGTAATGGTAACGCG 1 chrVIII:466783-467180 ( 64) CTTAGCTTAGTGGTAGAGCG 1 chrVIII:388752-389198 ( 46) TGTGGTCTAGTGGTATGATT 1 chrXV:464243-464673 ( 47) TGTGGTCTAGTGGTATGATT 1 chrXV:594230-594615 ( 29) AGTGGTTCAGTGGTTAGAAT 1 chrIII:142605-142953 ( 18) AGTGGTTTAGTGGTAAAATC 1 chrXIV:546906-547361 ( 16) TGTGGTCTAGTGGTATGATT 1 chrXIII:183774-184147 ( 34) AGTGGTTTAGTGGTAAAATC 1 chrIV:1256902-1257262 ( 23) AGTGGTTCAGTGGTTAGAAT 1 chrXVI:572083-572539 ( 13) AGTGGTTTAGTGGTAAAATC 1 chrX:396618-396718 ( 24) AGTGGTTTAGTGGTAAAATC 1 chrVII:930832-931214 ( 26) AGTGGTTTAGTGGTAAAATC 1 chrXVI:860196-860582 ( 45) AGTGGTTTAGTGGTAAAATC 1 chrXV:281983-282358 ( 49) AGTGGTTTAGTGGTAAAATC 1 chrXV:226471-226860 ( 42) AGTGGTTTAGTGGTAAAATC 1 chrVII:405276-405742 ( 16) CGTGGCGTAATGGCAACGCG 1 chrVII:828504-828981 ( 78) CGTGGCGTAATGGCAACGCG 1 chrVII:736154-736569 ( 34) CGTGGCGTAATGGCAACGCG 1 chrXIII:131663-132071 ( 55) CGTGGCGTAATGGCAACGCG 1 chrII:405689-406159 ( 9) CGTGGCGTAATGGCAACGCG 1 chrXIII:747768-748141 ( 35) CGTGGCGTAATGGCAACGCG 1 chrXI:162288-162735 ( 73) CGTGGCGTAATGGCAACGCG 1 chrXV:976234-976695 ( 12) AGTAGCTCAGTAGGAAGAGC 1 chrX:422754-422854 ( 35) AGTAGCTCAGTAGGAAGAGC 1 chrIV:1175643-1176044 ( 41) AGTAGCTCAGTAGGAAGAGC 1 chrX:415820-415920 ( 34) GGTGGCTCAATGGTAGAGCT 1 chrX:517665-517765 ( 50) CGTGGCGCAGTGGAAGCGCG 1 chrVII:878595-878991 ( 48) GGTGGCTCAATGGTAGAGCT 1 chrV:99941-100364 ( 36) CGTGGCGCAGTGGAAGCGCG 1 chrVII:287205-287634 ( 62) GGTGGCTCAATGGTAGAGCT 1 chrXI:302733-303183 ( 15) GGTGGCTCAATGGTAGAGCT 1 chrXVI:338724-339098 ( 34) CGTGGCGCAGTGGAAGCGCG 1 chrVI:210484-210890 ( 46) GGTAGCCAAGTTGGTTTAAG 1 chrXV:288013-288401 ( 40) GGTAGCCAAGTTGGTTTAAG 1 chrX:354057-354157 ( 35) GGTAGCCAAGTTGGTTTAAG 1 chrX:542775-542875 ( 64) GGTAGCCAAGTTGGTTTAAG 1 chrXV:83217-83401 ( 26) TACGGCCGAATGGGCAAAGT 1 chrXIV:6564-6936 ( 76) TATGGTTGAGTGGGGCAGGG 1 chrV:207132-207584 ( 54) CTTAGTATAGTGGTTAGTAC 1 chrVII:110466-110896 ( 41) CTTAGTATAGTGGTTAGTAC 1 chrVII:319593-320029 ( 25) CTTAGTATAGTGGTTAGTAC 1 chrXIII:362881-363276 ( 41) CTTAGTATAGTGGTTAGTAC 1 chrXI:313239-313651 ( 53) CTTAGTATAGTGGTTAGTAC 1 chrV:250101-250513 ( 34) TATAGTGTAGTGGTTATCAC 1 chrIV:520788-521168 ( 49) TATAGTGTAGTGGTTATCAC 1 chrIII:168160-168570 ( 33) TATAGTGTAGTGGTTATCAC 1 chrVIII:134135-134515 ( 51) TATAGTGTAGTGGTTATCAC 1 chrI:30-311 ( 30) TATGGTTGAATGGGACAGGG 1 chrIII:305670-305873 ( 30) CTCCGTCTAGTGGGATAGGC 1 chrXII:1061080-1061248 ( 33) CTCCGTCTAGTGGGATAGGC 1 chrIV:720560-720970 ( 36) GTTTGCCCAGTCGGTTTACG 1 chrIII:137976-138386 ( 14) GATGGTCAAAAGGTCAAGGC 1 chrXIV:96053-96504 ( 60) GTTAGTGTAGTGGTTATCAT 1 chrII:235598-236008 ( 5) GGTGGTAAAGCTGGTTCAGC 1 chrXII:489235-489593 ( 32) TGTAGTTAAGCTGGTAAGAG 1 chrXVI:775652-776023 ( 25) TATGGCGCAGTGGTAGCGCA 1 chrXIV:631712-632097 ( 39) TGTGGTCTAGAGGTATGATT 1 chrVII:706949-707373 ( 44) TATGGCGCAGTGGTAGCGCA 1 chrIII:123428-123820 ( 50) TGTGGTCTAGAGGTATGATT 1 chrXV:571772-572167 ( 44) GATAGTTTAATGGTCAGAAT 1 chrVII:544378-544836 ( 67) GATAGTTTAATGGTCAGAAT 1 chrVII:766124-766508 ( 48) CGCAGCGCAGTCGCCTGCCG 1 chrIX:336169-336595 ( 64) GATAGTTTAATGGTCAGAAT 1 chrIX:324165-324560 ( 38) GATAGTTTAATGGTCAGAAT 1 chrXII:426947-427340 ( 44) GATAGTTTAATGGTCAGAAT 1 chrVII:531444-531832 ( 27) GATAGTTTAATGGTCAGAAT 1 chrX:355188-355288 ( 58) GATAGTTTAATGGTCAGAAT 1 chrXV:619261-619520 ( 20) TGTGGCACCGCGGCATGAGC 1 chrXV:988459-988869 ( 80) GTTAGCGGCGACGGTAGCGG 1 chrXI:618792-619218 ( 30) ATTTGTGTAGTTGTCTGGGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BKTGGCBYAGTGGKTWRRGS MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 47547 bayes= 8.46259 E= 6.0e-316 -152 85 25 3 -66 -1397 113 32 -1397 -296 -1397 167 -12 -396 184 -461 -1397 -1397 236 -1397 -1397 182 -1397 3 -280 115 33 -12 -144 69 -15 39 169 -396 -1397 -1397 -57 -1397 203 -1397 -361 -164 -1397 158 -403 -10 153 -36 -1397 -1397 236 -1397 -403 -179 123 62 -25 -20 -179 76 93 -396 -126 9 60 -79 90 -229 58 -31 60 -171 -103 -43 169 -191 -461 129 97 -122 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BKTGGCBYAGTGGKTWRRGS MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 160 E= 6.0e-316 0.106250 0.350000 0.231250 0.312500 0.193750 0.000000 0.425000 0.381250 0.000000 0.025000 0.000000 0.975000 0.281250 0.012500 0.693750 0.012500 0.000000 0.000000 1.000000 0.000000 0.000000 0.687500 0.000000 0.312500 0.043750 0.431250 0.243750 0.281250 0.112500 0.312500 0.175000 0.400000 0.987500 0.012500 0.000000 0.000000 0.206250 0.000000 0.793750 0.000000 0.025000 0.062500 0.000000 0.912500 0.018750 0.181250 0.562500 0.237500 0.000000 0.000000 1.000000 0.000000 0.018750 0.056250 0.456250 0.468750 0.256250 0.168750 0.056250 0.518750 0.581250 0.012500 0.081250 0.325000 0.462500 0.112500 0.362500 0.062500 0.456250 0.156250 0.293750 0.093750 0.150000 0.143750 0.625000 0.081250 0.012500 0.475000 0.381250 0.131250 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BKTGGCBYAGTGGKTWRRGS MEME-1 regular expression -------------------------------------------------------------------------------- [CTG][GT]T[GA]G[CT][CTG][TC]A[GA]T[GT]G[TG][TA][AT][AG][AG]G[CG] -------------------------------------------------------------------------------- Time 339.01 secs. ******************************************************************************** ******************************************************************************** MOTIF AYSDDRAGRTCMBSGGTTCGABYCC MEME-2 width = 25 sites = 73 llr = 1297 E-value = 4.6e-240 ******************************************************************************** -------------------------------------------------------------------------------- Motif AYSDDRAGRTCMBSGGTTCGABYCC MEME-2 Description -------------------------------------------------------------------------------- Simplified A 7::3247252:4112::::3a2::: pos.-specific C 1371111:::7433::::a::24a7 probability G 123454275::1358a:::7:2::: matrix T 15:221:1:83131::aa:::45:2 bits 2.4 * * * 2.1 * * * 1.9 * * * 1.7 * ** * * Relative 1.4 * * ****** * Entropy 1.2 * * * ******* ** (25.6 bits) 0.9 * ** * ******* ** 0.7 * ***** ******** *** 0.5 *** ***** ******** *** 0.2 *** ***************** *** 0.0 ------------------------- Multilevel ATCGGAAGGTCCCGGGTTCGATTCC consensus CGAAGG AATATC A GC T sequence TT G C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AYSDDRAGRTCMBSGGTTCGABYCC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------- chrIII:123428-123820 - 14 3.75e-12 TCGCTTAGGG TGCGGGAGGTCCCGGGTTCGAGTCC CGGCTCGCCC chrXVI:880139-880555 - 10 1.36e-11 CGTGCTAATA ACGCGGGGATCAGCGGTTCGATCCC GCTAGAGAC chrV:551140-551516 - 18 1.36e-11 CGTGCTAATA ACGCGGGGATCAGCGGTTCGATCCC GCTAGAGACC chrVII:738940-739348 + 66 1.36e-11 CGTGCTAATA ACGCGGGGATCAGCGGTTCGATCCC GCTAGAGACC chrVII:405276-405742 + 47 2.27e-11 CTGACTTCTA ATCAGAAGATTATGGGTTCGACCCC CATCGTGAGT chrIV:1352322-1352722 - 5 2.27e-11 ATGACTCTTA ATCATAAGGTTAGGGGTTCGAGCCC CCTA chrV:135228-135688 - 28 2.27e-11 ATGACTCTTA ATCATAAGGTTAGGGGTTCGAGCCC CCTACAGGGC chrVII:828504-828981 - 42 2.27e-11 CTGACTTCTA ATCAGAAGATTATGGGTTCGACCCC CATCGTGAGT chrVII:736154-736569 + 65 2.27e-11 CTGACTTCTA ATCAGAAGATTATGGGTTCGACCCC CATCGTGAGT chrVII:122104-122529 + 40 2.27e-11 ATGACTCTTA ATCATAAGGTTAGGGGTTCGAGCCC CCTACAGGGC chrXIII:480479-480869 - 8 2.27e-11 ATGACTCTTA ATCATAAGGTTAGGGGTTCGAGCCC CCTACAG chrXIII:131663-132071 - 19 2.27e-11 CTGACTTCTA ATCAGAAGATTATGGGTTCGACCCC CATCGTGAGT chrXI:202808-203248 + 58 2.27e-11 ATGACTCTTA ATCATAAGGTTAGGGGTTCGAGCCC CCTACAGGGC chrII:405689-406159 + 40 2.27e-11 CTGACTTCTA ATCAGAAGATTATGGGTTCGACCCC CATCGTGAGT chrVII:876211-876646 + 53 2.27e-11 ATGACTCTTA ATCATAAGGTTAGGGGTTCGAGCCC CCTACAGGGC chrX:355188-355288 + 7 2.27e-11 CTTCTA ATCAGAAGATTATGGGTTCGACCCC CATCGTGAGT chrXI:162288-162735 - 37 2.27e-11 CTGACTTCTA ATCAGAAGATTATGGGTTCGACCCC CATCGTGAGT chrXV:854033-854443 - 10 5.89e-11 TTCCCTTGCA AGGAAGAGGTCATCGGTTCGATTCC GGTTGCGTC chrVII:115302-115748 + 73 7.95e-11 AAGCAAGGAT ACCGAAATGTCAGGGGTTCGAGCCC CCT chrXV:438458-438918 + 65 7.95e-11 AAGCAAGGAT ACCGAAATGTCAGGGGTTCGAGCCC CCTATGAGGA chrXI:578771-579259 + 60 7.95e-11 AAGCAAGGAT ACCGAAATGTCAGGGGTTCGAGCCC CCTATGAGGA chrX:115776-115876 - 15 1.23e-10 TCACGCTTTC ACCGTGGAGACCGGGGTTCGACTCC CCGTATCGGA chrVII:328397-328900 + 21 1.23e-10 TCACGCTTTC ACCGTGGAGACCGGGGTTCGACTCC CCGTATCGGA chrXI:140851-141273 - 17 1.23e-10 TCACGCTTTC ACCGTGGAGACCGGGGTTCGACTCC CCGTATCGGA chrVII:541667-542130 + 38 1.23e-10 TCACGCTTTC ACCGTGGAGACCGGGGTTCGACTCC CCGTATCGGA chrIX:325552-326014 + 52 3.18e-10 CACACTAGTA ATGTGGAGATCATCGGTTCAAATCC GATTGGAAGC chrVIII:115929-116379 - 14 3.18e-10 CACACTAGTA ATGTGGAGATCATCGGTTCAAATCC GATTGGAAGC chrIII:295278-295774 + 45 3.18e-10 CACACTAGTA ATGTGGAGATCATCGGTTCAAATCC GATTGGAAGC chrIX:174838-175292 + 53 3.18e-10 CACACTAGTA ATGTGGAGATCATCGGTTCAAATCC GATTGGAAGC chrII:266199-266634 + 49 3.18e-10 CACACTAGTA ATGTGGAGATCATCGGTTCAAATCC GATTGGAAGC chrIV:434040-434531 - 40 3.18e-10 CACACTAGTA ATGTGGAGATCATCGGTTCAAATCC GATTGGAAGC chrV:61633-62143 - 63 4.66e-10 CAACGTTGCC ATCGTTGGGCCCCCGGTTCGATTCC GGGCTTGCGC chrXVI:572083-572539 + 43 4.66e-10 CAACGTTGCC ATCGTTGGGCCCCCGGTTCGATTCC GGGCTTGCGC chrXV:226471-226860 - 7 4.66e-10 CAACGTTGCC ATCGTTGGGCCCCCGGTTCGATTCC GGGCTT chrV:250101-250513 + 65 9.65e-10 TTCGGTTTTG ATCCGGACAACCCCGGTTCGAATCC GGGTAGGACC chrXII:374172-374596 + 58 9.65e-10 CTGGCTACGA ACCAGAAGATTCCAGGTTCAAGTCC TGGCGGGGAA chrXV:340140-340552 - 14 9.65e-10 CTGGCTACGA ACCAGAAGATTCCAGGTTCAAGTCC TGGCGGGGAA chrIV:619811-620224 - 13 9.65e-10 CTGGCTACGA ACCAGAAGATTCCAGGTTCAAGTCC TGGCGGGGAA chrV:492200-492607 - 10 9.65e-10 CTGGCTACGA ACCAGAAGATTCCAGGTTCAAGTCC TGGCGGGGA chrVIII:146060-146497 - 25 1.22e-09 TCCCTTAGCA TGGGAGAGGTCTCCGGTTCGATTCC GGACTCGTCC chrVII:774166-774668 + 19 1.22e-09 TCCCTTAGCA TGGGAGAGGTCTCCGGTTCGATTCC GGACTCGTCC chrIV:410197-410595 + 70 1.22e-09 TCCCTTAGCA TGGGAGAGGTCTCCGGTTCGATTCC GGACTC chrXIII:321007-321380 - 15 1.22e-09 TCCCTTAGCA TGGGAGAGGTCTCCGGTTCGATTCC GGACTCGTCC chrXIII:768209-768624 - 14 1.22e-09 TCCCTTAGCA TGGGAGAGGTCTCCGGTTCGATTCC GGACTCGTCC chrXV:976234-976695 + 44 6.55e-09 CAGTCTCATA ATCTGAAGGTCGAGAGTTCGAACCT CCCCTGGAGC chrX:422754-422854 + 67 6.55e-09 CAGTCTCATA ATCTGAAGGTCGAGAGTTCGAACCT CCCCTGGAG chrIV:1175643-1176044 + 73 6.55e-09 CAGTCTCATA ATCTGAAGGTCGAGAGTTCGAACCT CCC chrXIV:96053-96504 - 24 7.21e-09 CCACCCTTCC AAGGTGGGGACACGGGTTCGATTCT CGTACCGCTC chrVIII:475521-475949 - 32 1.05e-08 TGCCTTCACA CGGCAAAGGTCCCGAGTTCGATCCT CGGTTGGAAC chrXV:228141-228577 + 60 1.38e-08 GCGACTGTTA ATCGCAAGATCGTGAGTTCAACCCT CACTGGGGTC chrVI:137333-137739 - 11 1.38e-08 GCGACTGTTA ATCGCAAGATCGTGAGTTCAACCCT CACTGGGGTC chrXI:74438-74845 + 71 1.38e-08 GCGACTGTTA ATCGCAAGATCGTGAGTTCAACCCT CACTG chrIV:488535-489076 - 53 1.38e-08 CGCCTTTACA CGGCGAAGATCCCGAGTTCGAACCT CGGTTGGATC chrIV:1095187-1095639 - 18 1.95e-08 TGGTCAAGAT ATCTGGAGGTCCTGTGTTCGATCCA CAGAGTTCGC chrXV:663654-664060 - 16 2.32e-08 CTGCTTAACA CGCAGAACGTCCCCAGTTCGATCCT GGGCGAAATC chrXII:687668-688105 - 34 2.32e-08 CTGCTTAACA CGCAGAACGTCCCCAGTTCGATCCT GGGCGAAATC chrX:542775-542875 - 11 6.01e-08 TCACTACGAA ATCTTGAGATCGGGCGTTCGACTCG CCCCCGGGAG chrVII:1004049-1004419 + 68 6.98e-08 TGCACTTGTA ATGCAAAGGTCGTTAGTTCAATTCT GACAGGTG chrXVI:744105-744501 + 67 6.98e-08 TGCACTTGTA ATGCAAAGGTCGTTAGTTCAATTCT GACAGGTGG chrVII:706949-707373 - 8 1.00e-07 CAGATTGCAA ATCTGTTGGTCCTTAGTTCGATCCT GAGTGCG chrVII:110466-110896 - 5 1.07e-07 CATCGTTGTG GCCGATGAAACCCTGGTTCGATTCT AGGA chrVII:319593-320029 + 56 1.07e-07 CATCGTTGTG GCCGATGAAACCCTGGTTCGATTCT AGGAGATGGC chrVII:544378-544836 - 31 1.07e-07 GGCGCTTGTC GCGTGCCAGATCGGGGTTCAATTCC CCGTCGCGGA chrX:517665-517765 - 14 1.07e-07 AGGGCTCATA ACCCTGATGTCCTCGGATCGAAACC GAGCGGCGCT chrIX:336169-336595 - 28 1.07e-07 GGCGCTTGTC GCGTGCCAGATCGGGGTTCAATTCC CCGTCGCGGA chrXIII:362881-363276 + 72 1.07e-07 CATCGTTGTG GCCGATGAAACCCTGGTTCGATTCT AGGA chrV:99941-100364 + 67 1.07e-07 AGGGCTCATA ACCCTGATGTCCTCGGATCGAAACC GAGCGGCGC chrVII:531444-531832 + 58 1.07e-07 GGCGCTTGTC GCGTGCCAGATCGGGGTTCAATTCC CCGTCGCGGA chrXIII:463368-463861 + 26 1.07e-07 GGCGCTTGTC GCGTGCCAGATCGGGGTTCAATTCC CCGTCGCGGA chrXI:313239-313651 - 17 1.07e-07 CATCGTTGTG GCCGATGAAACCCTGGTTCGATTCT AGGAGATGGC chrVII:483319-483715 + 12 3.84e-07 TGCGGTAATT ATCGCCGGATCTCCGCTTCGAGACC GGGTTTGTTT chrVIII:379516-379926 - 61 4.17e-06 ACATTTACCA TTTGAGGGATCTGAAGATCAAGTCC GCCTTAAGGG chrIV:45196-45606 + 22 5.28e-06 TACATGTGCT GACAACCAAACCACCGTTCAATTCC CAGTCTACCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AYSDDRAGRTCMBSGGTTCGABYCC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:123428-123820 3.8e-12 13_[-2]_62 chrXVI:880139-880555 1.4e-11 9_[-2]_66 chrV:551140-551516 1.4e-11 17_[-2]_58 chrVII:738940-739348 1.4e-11 65_[+2]_10 chrVII:405276-405742 2.3e-11 46_[+2]_29 chrIV:1352322-1352722 2.3e-11 4_[-2]_71 chrV:135228-135688 2.3e-11 27_[-2]_48 chrVII:828504-828981 2.3e-11 41_[-2]_34 chrVII:736154-736569 2.3e-11 64_[+2]_11 chrVII:122104-122529 2.3e-11 39_[+2]_36 chrXIII:480479-480869 2.3e-11 7_[-2]_68 chrXIII:131663-132071 2.3e-11 18_[-2]_57 chrXI:202808-203248 2.3e-11 57_[+2]_18 chrII:405689-406159 2.3e-11 39_[+2]_36 chrVII:876211-876646 2.3e-11 52_[+2]_23 chrX:355188-355288 2.3e-11 6_[+2]_69 chrXI:162288-162735 2.3e-11 36_[-2]_39 chrXV:854033-854443 5.9e-11 9_[-2]_66 chrVII:115302-115748 8e-11 72_[+2]_3 chrXV:438458-438918 8e-11 64_[+2]_11 chrXI:578771-579259 8e-11 59_[+2]_16 chrX:115776-115876 1.2e-10 14_[-2]_61 chrVII:328397-328900 1.2e-10 20_[+2]_55 chrXI:140851-141273 1.2e-10 16_[-2]_59 chrVII:541667-542130 1.2e-10 37_[+2]_38 chrIX:325552-326014 3.2e-10 51_[+2]_24 chrVIII:115929-116379 3.2e-10 13_[-2]_62 chrIII:295278-295774 3.2e-10 44_[+2]_31 chrIX:174838-175292 3.2e-10 52_[+2]_23 chrII:266199-266634 3.2e-10 48_[+2]_27 chrIV:434040-434531 3.2e-10 39_[-2]_36 chrV:61633-62143 4.7e-10 62_[-2]_13 chrXVI:572083-572539 4.7e-10 42_[+2]_33 chrXV:226471-226860 4.7e-10 6_[-2]_69 chrV:250101-250513 9.7e-10 64_[+2]_11 chrXII:374172-374596 9.7e-10 57_[+2]_18 chrXV:340140-340552 9.7e-10 13_[-2]_62 chrIV:619811-620224 9.7e-10 12_[-2]_63 chrV:492200-492607 9.7e-10 9_[-2]_66 chrVIII:146060-146497 1.2e-09 24_[-2]_51 chrVII:774166-774668 1.2e-09 18_[+2]_57 chrIV:410197-410595 1.2e-09 69_[+2]_6 chrXIII:321007-321380 1.2e-09 14_[-2]_61 chrXIII:768209-768624 1.2e-09 13_[-2]_62 chrXV:976234-976695 6.5e-09 43_[+2]_32 chrX:422754-422854 6.5e-09 66_[+2]_9 chrIV:1175643-1176044 6.5e-09 72_[+2]_3 chrXIV:96053-96504 7.2e-09 23_[-2]_52 chrVIII:475521-475949 1e-08 31_[-2]_44 chrXV:228141-228577 1.4e-08 59_[+2]_16 chrVI:137333-137739 1.4e-08 10_[-2]_65 chrXI:74438-74845 1.4e-08 70_[+2]_5 chrIV:488535-489076 1.4e-08 52_[-2]_23 chrIV:1095187-1095639 2e-08 17_[-2]_58 chrXV:663654-664060 2.3e-08 15_[-2]_60 chrXII:687668-688105 2.3e-08 33_[-2]_42 chrX:542775-542875 6e-08 10_[-2]_65 chrVII:1004049-1004419 7e-08 67_[+2]_8 chrXVI:744105-744501 7e-08 66_[+2]_9 chrVII:706949-707373 1e-07 7_[-2]_68 chrVII:110466-110896 1.1e-07 4_[-2]_71 chrVII:319593-320029 1.1e-07 55_[+2]_20 chrVII:544378-544836 1.1e-07 30_[-2]_45 chrX:517665-517765 1.1e-07 13_[-2]_62 chrIX:336169-336595 1.1e-07 27_[-2]_48 chrXIII:362881-363276 1.1e-07 71_[+2]_4 chrV:99941-100364 1.1e-07 66_[+2]_9 chrVII:531444-531832 1.1e-07 57_[+2]_18 chrXIII:463368-463861 1.1e-07 25_[+2]_50 chrXI:313239-313651 1.1e-07 16_[-2]_59 chrVII:483319-483715 3.8e-07 11_[+2]_64 chrVIII:379516-379926 4.2e-06 60_[-2]_15 chrIV:45196-45606 5.3e-06 21_[+2]_54 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AYSDDRAGRTCMBSGGTTCGABYCC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AYSDDRAGRTCMBSGGTTCGABYCC width=25 seqs=73 chrIII:123428-123820 ( 14) TGCGGGAGGTCCCGGGTTCGAGTCC 1 chrXVI:880139-880555 ( 10) ACGCGGGGATCAGCGGTTCGATCCC 1 chrV:551140-551516 ( 18) ACGCGGGGATCAGCGGTTCGATCCC 1 chrVII:738940-739348 ( 66) ACGCGGGGATCAGCGGTTCGATCCC 1 chrVII:405276-405742 ( 47) ATCAGAAGATTATGGGTTCGACCCC 1 chrIV:1352322-1352722 ( 5) ATCATAAGGTTAGGGGTTCGAGCCC 1 chrV:135228-135688 ( 28) ATCATAAGGTTAGGGGTTCGAGCCC 1 chrVII:828504-828981 ( 42) ATCAGAAGATTATGGGTTCGACCCC 1 chrVII:736154-736569 ( 65) ATCAGAAGATTATGGGTTCGACCCC 1 chrVII:122104-122529 ( 40) ATCATAAGGTTAGGGGTTCGAGCCC 1 chrXIII:480479-480869 ( 8) ATCATAAGGTTAGGGGTTCGAGCCC 1 chrXIII:131663-132071 ( 19) ATCAGAAGATTATGGGTTCGACCCC 1 chrXI:202808-203248 ( 58) ATCATAAGGTTAGGGGTTCGAGCCC 1 chrII:405689-406159 ( 40) ATCAGAAGATTATGGGTTCGACCCC 1 chrVII:876211-876646 ( 53) ATCATAAGGTTAGGGGTTCGAGCCC 1 chrX:355188-355288 ( 7) ATCAGAAGATTATGGGTTCGACCCC 1 chrXI:162288-162735 ( 37) ATCAGAAGATTATGGGTTCGACCCC 1 chrXV:854033-854443 ( 10) AGGAAGAGGTCATCGGTTCGATTCC 1 chrVII:115302-115748 ( 73) ACCGAAATGTCAGGGGTTCGAGCCC 1 chrXV:438458-438918 ( 65) ACCGAAATGTCAGGGGTTCGAGCCC 1 chrXI:578771-579259 ( 60) ACCGAAATGTCAGGGGTTCGAGCCC 1 chrX:115776-115876 ( 15) ACCGTGGAGACCGGGGTTCGACTCC 1 chrVII:328397-328900 ( 21) ACCGTGGAGACCGGGGTTCGACTCC 1 chrXI:140851-141273 ( 17) ACCGTGGAGACCGGGGTTCGACTCC 1 chrVII:541667-542130 ( 38) ACCGTGGAGACCGGGGTTCGACTCC 1 chrIX:325552-326014 ( 52) ATGTGGAGATCATCGGTTCAAATCC 1 chrVIII:115929-116379 ( 14) ATGTGGAGATCATCGGTTCAAATCC 1 chrIII:295278-295774 ( 45) ATGTGGAGATCATCGGTTCAAATCC 1 chrIX:174838-175292 ( 53) ATGTGGAGATCATCGGTTCAAATCC 1 chrII:266199-266634 ( 49) ATGTGGAGATCATCGGTTCAAATCC 1 chrIV:434040-434531 ( 40) ATGTGGAGATCATCGGTTCAAATCC 1 chrV:61633-62143 ( 63) ATCGTTGGGCCCCCGGTTCGATTCC 1 chrXVI:572083-572539 ( 43) ATCGTTGGGCCCCCGGTTCGATTCC 1 chrXV:226471-226860 ( 7) ATCGTTGGGCCCCCGGTTCGATTCC 1 chrV:250101-250513 ( 65) ATCCGGACAACCCCGGTTCGAATCC 1 chrXII:374172-374596 ( 58) ACCAGAAGATTCCAGGTTCAAGTCC 1 chrXV:340140-340552 ( 14) ACCAGAAGATTCCAGGTTCAAGTCC 1 chrIV:619811-620224 ( 13) ACCAGAAGATTCCAGGTTCAAGTCC 1 chrV:492200-492607 ( 10) ACCAGAAGATTCCAGGTTCAAGTCC 1 chrVIII:146060-146497 ( 25) TGGGAGAGGTCTCCGGTTCGATTCC 1 chrVII:774166-774668 ( 19) TGGGAGAGGTCTCCGGTTCGATTCC 1 chrIV:410197-410595 ( 70) TGGGAGAGGTCTCCGGTTCGATTCC 1 chrXIII:321007-321380 ( 15) TGGGAGAGGTCTCCGGTTCGATTCC 1 chrXIII:768209-768624 ( 14) TGGGAGAGGTCTCCGGTTCGATTCC 1 chrXV:976234-976695 ( 44) ATCTGAAGGTCGAGAGTTCGAACCT 1 chrX:422754-422854 ( 67) ATCTGAAGGTCGAGAGTTCGAACCT 1 chrIV:1175643-1176044 ( 73) ATCTGAAGGTCGAGAGTTCGAACCT 1 chrXIV:96053-96504 ( 24) AAGGTGGGGACACGGGTTCGATTCT 1 chrVIII:475521-475949 ( 32) CGGCAAAGGTCCCGAGTTCGATCCT 1 chrXV:228141-228577 ( 60) ATCGCAAGATCGTGAGTTCAACCCT 1 chrVI:137333-137739 ( 11) ATCGCAAGATCGTGAGTTCAACCCT 1 chrXI:74438-74845 ( 71) ATCGCAAGATCGTGAGTTCAACCCT 1 chrIV:488535-489076 ( 53) CGGCGAAGATCCCGAGTTCGAACCT 1 chrIV:1095187-1095639 ( 18) ATCTGGAGGTCCTGTGTTCGATCCA 1 chrXV:663654-664060 ( 16) CGCAGAACGTCCCCAGTTCGATCCT 1 chrXII:687668-688105 ( 34) CGCAGAACGTCCCCAGTTCGATCCT 1 chrX:542775-542875 ( 11) ATCTTGAGATCGGGCGTTCGACTCG 1 chrVII:1004049-1004419 ( 68) ATGCAAAGGTCGTTAGTTCAATTCT 1 chrXVI:744105-744501 ( 67) ATGCAAAGGTCGTTAGTTCAATTCT 1 chrVII:706949-707373 ( 8) ATCTGTTGGTCCTTAGTTCGATCCT 1 chrVII:110466-110896 ( 5) GCCGATGAAACCCTGGTTCGATTCT 1 chrVII:319593-320029 ( 56) GCCGATGAAACCCTGGTTCGATTCT 1 chrVII:544378-544836 ( 31) GCGTGCCAGATCGGGGTTCAATTCC 1 chrX:517665-517765 ( 14) ACCCTGATGTCCTCGGATCGAAACC 1 chrIX:336169-336595 ( 28) GCGTGCCAGATCGGGGTTCAATTCC 1 chrXIII:362881-363276 ( 72) GCCGATGAAACCCTGGTTCGATTCT 1 chrV:99941-100364 ( 67) ACCCTGATGTCCTCGGATCGAAACC 1 chrVII:531444-531832 ( 58) GCGTGCCAGATCGGGGTTCAATTCC 1 chrXIII:463368-463861 ( 26) GCGTGCCAGATCGGGGTTCAATTCC 1 chrXI:313239-313651 ( 17) GCCGATGAAACCCTGGTTCGATTCT 1 chrVII:483319-483715 ( 12) ATCGCCGGATCTCCGCTTCGAGACC 1 chrVIII:379516-379926 ( 61) TTTGAGGGATCTGAAGATCAAGTCC 1 chrIV:45196-45606 ( 22) GACAACCAAACCACCGTTCAATTCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AYSDDRAGRTCMBSGGTTCGABYCC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 25 n= 44612 bayes= 10.6682 E= 4.6e-240 125 -183 -66 -167 -348 76 -37 69 -1283 176 76 -448 -9 -50 87 -48 -31 -183 126 -39 52 -124 93 -148 116 -150 26 -448 -78 -224 187 -216 56 -1283 150 -1283 -57 -224 -1283 130 -1283 187 -1283 -9 27 108 -66 -167 -248 76 63 4 -216 82 134 -167 -67 -282 198 -448 -1283 -382 234 -1283 -289 -1283 -1283 165 -1283 -1283 -1283 171 -1283 236 -1283 -1283 -9 -1283 187 -1283 171 -1283 -1283 -1283 -78 8 17 38 -289 113 -1283 81 -1283 236 -1283 -1283 -448 190 -382 -31 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AYSDDRAGRTCMBSGGTTCGABYCC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 25 nsites= 73 E= 4.6e-240 0.726027 0.054795 0.123288 0.095890 0.027397 0.328767 0.150685 0.493151 0.000000 0.657534 0.328767 0.013699 0.287671 0.136986 0.356164 0.219178 0.246575 0.054795 0.465753 0.232877 0.438356 0.082192 0.369863 0.109589 0.684932 0.068493 0.232877 0.013699 0.178082 0.041096 0.712329 0.068493 0.452055 0.000000 0.547945 0.000000 0.205479 0.041096 0.000000 0.753425 0.000000 0.712329 0.000000 0.287671 0.369863 0.410959 0.123288 0.095890 0.054795 0.328767 0.301370 0.315068 0.068493 0.342466 0.493151 0.095890 0.191781 0.027397 0.767123 0.013699 0.000000 0.013699 0.986301 0.000000 0.041096 0.000000 0.000000 0.958904 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.287671 0.000000 0.712329 0.000000 1.000000 0.000000 0.000000 0.000000 0.178082 0.205479 0.219178 0.397260 0.041096 0.424658 0.000000 0.534247 0.000000 1.000000 0.000000 0.000000 0.013699 0.726027 0.013699 0.246575 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AYSDDRAGRTCMBSGGTTCGABYCC MEME-2 regular expression -------------------------------------------------------------------------------- A[TC][CG][GAT][GAT][AG][AG]G[GA][TA][CT][CA][CTG][GC]GGTTC[GA]A[TGC][TC]C[CT] -------------------------------------------------------------------------------- Time 631.03 secs. ******************************************************************************** ******************************************************************************** MOTIF GRTGTAYGGRTG MEME-3 width = 12 sites = 133 llr = 1436 E-value = 1.6e-152 ******************************************************************************** -------------------------------------------------------------------------------- Motif GRTGTAYGGRTG MEME-3 Description -------------------------------------------------------------------------------- Simplified A 35:::7:1:3:: pos.-specific C ::::2:4:::1: probability G 651a:2:9a6:8 matrix T 1:9:7:6:::91 bits 2.4 * 2.1 * * 1.9 * ** 1.7 * ** Relative 1.4 * ** * Entropy 1.2 ** ** ** (15.6 bits) 0.9 **** ****** 0.7 ************ 0.5 ************ 0.2 ************ 0.0 ------------ Multilevel GATGTATGGGTG consensus AG CGC A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTGTAYGGRTG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------ chrV:221552-221799 + 88 2.77e-08 AAAGCTGGCG GGTGTATGGGTG A chrXV:960156-960566 - 36 2.77e-08 TTCCGATGAG GGTGTATGGGTG GTTTGAAAAA chrII:681876-682214 - 63 2.77e-08 AAAGTAATGG GGTGTATGGGTG TGGGTGGCAA chrVIII:382892-383344 + 33 8.91e-08 TTATTTTCAT GATGTATGGGTG TATCGGATGT chrXIII:296767-297224 - 22 8.91e-08 AAAAGTTCTA GATGTATGGGTG TGCGGGTAAT chrVII:483319-483715 + 81 8.91e-08 AAAACAGAGT GATGTATGGGTG ATCCCAGC chrXVI:76304-76734 + 74 1.17e-07 CACATCCGTG GATGTACGGGTG AAAATACAGT chrXII:1028205-1028599 - 47 1.34e-07 CATACATTTT GGTGCATGGGTG ATATTTTGTC chrX:545418-545518 + 50 1.34e-07 GTGCGAGTGC GGTGCATGGGTG GCTGTCTTTT chrVII:371202-371519 - 46 1.34e-07 GGCGGTGTGA GGTGCATGGGTG CCGGTATTTT chrVI:95455-95890 + 14 1.63e-07 TACGCAGTCC GGTGTGTGGGTG CATGACTGAT chrXII:11011-11595 - 17 1.63e-07 GTGTGGGTGT GGTGTGTGGGTG TGGTGTGTGT chrXII:1064802-1065383 + 10 1.63e-07 TGTGGGTGT GGTGTGTGGGTG TGTGGGTGTG chrVIII:556577-557250 + 12 1.63e-07 GTGTGGGTGT GGTGTGTGGGTG TGGTGTGTGT chrV:6120-6552 - 64 1.63e-07 AGGTGAGCAT GGTGTGTGGGTG TGGGTGTGGG chrXII:5416-5943 - 38 1.63e-07 GTGTGGGTGT GGTGTGTGGGTG TGGTGTATAT chrXIII:5287-5831 - 35 1.63e-07 GTGTGGGTGT GGTGTGTGGGTG TGGGTGTATA chrXIV:89845-90255 - 43 1.63e-07 AGCATGTTGA GGTGTGTGGGTG GAGTTTTTCC chrXIII:145890-146314 - 33 2.46e-07 TATGGTGTAT GGTGTATGGATG TACAAAAATG chrXVI:404575-404876 - 32 2.46e-07 TTTTTAGAAT GATGCATGGGTG TGCAGCCTTT chrVII:149102-149520 + 57 2.46e-07 TGTATGGGTG GGTGTATGGATG CTGTAAGCAC chrVIII:125910-126331 - 33 3.63e-07 TAAAGATGTA GGTGTACGGATG CATTAACGTC chrXI:431314-431709 - 34 3.63e-07 ATGTAAAAAT AGTGTATGGGTG TATTTGCGCT chrVII:10225-10432 - 52 3.63e-07 CATGAGGTAT GATGCACGGGTG CACTGTTTAA chrIV:525112-525301 + 47 3.63e-07 TTTTTGGTGT AGTGTATGGGTG TTGTGAAAAT chrIII:163447-163909 + 19 4.19e-07 GCCGCGGTTG GGTGCGTGGGTG CGGTAATTTA chrX:607808-607908 - 60 4.95e-07 GGTTAAAAAG GATGTATGGATG GAGGGTTGGC chrII:592884-593274 + 56 4.95e-07 GGAGTTCAAA GATGTATGGATG CAAGAAAAGA chrX:157427-157527 + 7 4.95e-07 TATGGA GATGTATGGATG TATAAAGTGT chrV:85086-85519 - 49 6.26e-07 AATACATCGA GGGGTATGGGTG GATGATATCA chrIV:358089-358436 + 37 6.26e-07 CTTGTCAGAT AATGTATGGGTG GTGTGTACAC chrXII:932051-932504 + 32 6.26e-07 TTTGTGTACA GATGTACGGATG TACGGATGTA chrV:69053-69370 + 19 7.08e-07 GAAGCTTTGT GGGGTACGGGTG CATGCTCGGC chrI:81939-82287 + 47 8.43e-07 ATCTAGCGGA GGTGCACGGATG TACCAACAGT chrIII:58728-59002 - 57 8.43e-07 TTTCAGAAAT GGTGCACGGATG TACCCACGCA chrVII:856685-857040 + 52 1.38e-06 CCATTGGTGC GGTGTATGGGCG GGTACCCTCA chrII:415487-415880 + 50 1.38e-06 TGGATGACAA AATGCATGGGTG TAAAAAAGGA chrIV:125392-125571 + 47 1.38e-06 AATTTGGTGC GGTGTATGGGTT CAAGTTCCCA chrXVI:794491-794832 - 45 1.38e-06 ATAATATAAA TATGTATGGGTG TTTGGAGATG chrV:270351-270664 - 31 1.38e-06 CATTTAGTGG TATGTATGGGTG ATAAATTTTT chrV:522758-523024 - 62 1.38e-06 AGGCTTATGG GGTGTATGGGCG GGGGAAATAG chrIX:254195-254585 + 18 1.64e-06 CGGCAATTAG AATGTGTGGGTG CGGAAGCTCG chrIV:538837-539317 - 79 1.64e-06 GATTGAATGA GGGGTGTGGGTG TGATAATTCA chrIX:382176-382414 + 41 1.64e-06 CGCTTTCGGT AATGTGTGGGTG CGGTACCGTT chrXIII:732023-732416 - 38 1.64e-06 ACACATGCGC GATGTGCGGATG TATTATGTCT chrV:396195-396591 - 37 1.64e-06 GGTTCACAAA AGTGTACGGATG TATACAACAG chrXII:921668-922023 + 45 1.64e-06 TACTACAGCG GGGGCACGGGTG CATACATCTT chrII:477037-477474 - 30 1.64e-06 TGGGTGTATA AATGTGTGGGTG CAACATGAAT chrV:305778-306235 - 30 1.64e-06 TGGGCTTGTA AATGTGTGGGTG TACAGTCCCG chrIV:411236-411659 - 39 1.64e-06 TTGGGTGCCC GGGGTGTGGGTG TTTGATTTGT chrXV:79753-80162 + 41 1.64e-06 ACTTATTTAA TATGTACGGGTG TTTACATGGA chrXVI:575203-575400 - 50 1.82e-06 TTCCTGTTCT TGTGTGTGGGTG CTTCAGGCAA chrIV:1525203-1525694 + 45 1.82e-06 TGTGGTGTGG TGTGTGTGGGTG TGGTGTGGTG chrXV:161111-161439 + 21 2.11e-06 TAGGAATCCC GATGTATGGGTT TGGTTGCCAG chrX:75341-75441 + 59 2.11e-06 TTAAGTATGT GATGTATGGGCG CACAGTACCA chrVII:438553-438932 + 66 2.11e-06 AACGTTCCAA AATGTATGGATG GTAAGGTCTT chrIV:341246-341639 + 51 2.37e-06 TGGGTGTTAA AATGTACGGATG GAAAAGTAGA chrII:44990-45384 - 34 2.37e-06 ACATACATAG AATGTACGGATG CATGATTGTC chrXI:108728-109123 - 47 2.37e-06 GAGCCAACTA AATGTACGGATG TTGTAATGTG chrXIII:225332-225766 - 47 2.37e-06 TAAAAAATAG AATGTACGGATG TAATGCACGG chrXII:1012123-1012391 - 32 2.73e-06 ATTTGCGTGT GGTGCATGGGTT CTATTCCTCA chrIV:1259656-1259822 + 45 2.73e-06 TCATCATGGA GGTGCATGGGTT TCCTTCTGGT chrIV:392615-392770 + 18 2.73e-06 TTATCATCAC TATGCATGGGTG TCATTATTAT chrXV:92899-93354 + 36 3.12e-06 GAACGTCACA TGTGTACGGATG TAGTTGTGTC chrV:53502-53939 - 50 3.12e-06 GAACACCAAA TATGTGTGGGTG TCAAACAAAG chrXIII:754379-754775 + 45 3.12e-06 CGCTATTCTG GATGTATGGGGG TATTTTATGT chrXII:522140-522468 - 50 3.12e-06 GAAAACCTTT TGTGTACGGATG TTTAGTTAAT chrIV:1401251-1401611 - 53 3.12e-06 AAGGGTAATA TATGTGTGGGTG GAAAATGATT chrXII:950167-950369 - 53 3.12e-06 TCCTAAATGC GGTGTGTGGGTT ATAAGATGCC chrIV:1300922-1301371 - 14 3.12e-06 AAACATCCAC AGTGCACGGATG TTTGAAGGAA chrXVI:731902-732319 - 45 3.48e-06 AACCATCCTA AAGGTATGGGTG TACTGACGAT chrXIII:552889-553207 - 76 3.48e-06 CTTTCTATGA GATGTATGGGTC TCATGAATAA chrV:140430-140907 + 57 3.48e-06 GGCATTGTAA AAGGTATGGGTG CTTTGTGCGT chrVI:223882-224219 + 57 4.74e-06 GGTCTAAGAG TATGTACGGATG TAAAAGAAAA chrXII:282493-282883 - 20 4.74e-06 GGAGGGAAAA GATGTACAGGTG TAAAAAAGCA chrVII:534779-535235 + 47 4.74e-06 GGGTTACACA AATGCACGGATG CATATATAAA chrXII:673790-674266 - 77 4.74e-06 ATCAATATCT GGTGCATGGGTC TAAAAAAATT chrXII:241615-242026 - 38 4.74e-06 TTACATTTTA TATGTACGGATG TAAAAAGGGA chrXII:781439-781856 + 59 4.74e-06 GGTTTATGAA AATGCACGGATG CATTTTCTCT chrX:90047-90147 - 52 5.17e-06 AAAACAAGGC CATGTATGGGTG AGAATGTCCA chrII:236439-236849 - 54 5.17e-06 GGGAAATACC AGTGTCTGGGTG AGTTTGCTTC chrI:68333-68576 - 24 5.17e-06 GACGTGCTGC GGTGCATGGCTG TTTTACCCGT chrXIII:756336-756594 + 15 5.17e-06 GTTTTCCGAG GGTGTGTGGGTC TATGCCAAGA chrXIV:763995-764324 + 36 5.17e-06 CAGGGTCCTG AGTGTCTGGGTG CTGTCTACGT chrXV:968079-968440 + 60 5.54e-06 AAAAGCGTGG GGTGCGTGGGCG TGCGCTGCTC chrXV:882119-882425 - 77 5.54e-06 GGAAATATGC GGTGCACAGGTG TTTTTATAGG chrV:321948-322177 + 13 5.99e-06 AGCGTTGCGT GATGTTTGGGTG CAATTGGCGG chrV:423092-423500 - 27 5.99e-06 GGGTGTAGAA GGTGTACGGAGG TAAATATGCA chrIX:316121-316619 - 33 6.70e-06 TTTGTAAAAT AATGTATGGGTT CTAGTCTGAA chrXI:362140-362550 - 60 6.70e-06 TTATGTGTGA CGTGCACGGGTG CAATATCTAA chrXI:618792-619218 + 56 6.70e-06 AAATCTATTA GAGGCACGGATG GAAATAGTAT chrIX:257323-257720 - 63 8.49e-06 ACAACTTTGC GGTGTACAGATG TCGTCACATA chrXVI:135490-135784 + 39 8.49e-06 TACTTTACGG GGTGCACGGATT TTAGCAGTCT chrXI:67753-68106 - 35 8.49e-06 AATTTGATGC GGTGCACGGATT TCAGCACGGG chrVII:788304-788748 + 53 8.49e-06 GGGTTTAGAG TATGCACGGATG TTGTAAGGAA chrXV:987236-987388 - 25 9.24e-06 TTCTGGGCTG GATGTGCGGCTG CATCGCGTAC chrXIV:302318-302529 - 49 9.76e-06 TTATACAGGA AAGGTATGGATG TTACGGAAAC chrXV:1004077-1004450 + 34 9.76e-06 GTATGTTATG GGTGCAAGGGTG TTTTTTTTTT chrIV:308003-308396 - 56 1.04e-05 TGTAACAGGA AATGTATGGGTC ACATATTAAT chrXVI:406185-406574 - 43 1.04e-05 TGGAGGTGGA AAGGTACGGATG TTAAACTTCA chrII:165013-165554 - 25 1.18e-05 GCTCTAACGC GGTGTATGGGCT AGATTCGTAA chrX:651239-651339 - 62 1.18e-05 TTGAGACAAA TATGTATGGGTT AAGAATAATT chrVIII:74932-75391 - 43 1.32e-05 GGATGTAGAA AATGTACAGGTG TGAACTTGCA chrXIII:302800-303131 + 50 1.32e-05 CCAGGGGTGT GGGGTGTGGGCG CCCATATGCG chrXIV:495174-495597 + 60 1.32e-05 GGGTGTGTAT AGTGTACGGATT GAATATGTCA chrXI:158213-158616 - 37 1.52e-05 TTATTTCCAG TGTGCACGGGTT GAAATAAATG chrXII:498511-498904 - 17 1.52e-05 TTCCTTACAG GATGCACGGAGG TAAACAGGAA chrIV:599760-600226 - 10 1.65e-05 GAATCTGGCA GATGCATGGATC GTTGAATAG chrXIII:124315-124701 - 38 1.65e-05 ACATTATTAA AATGTATGGATT TGTTATATTT chrII:332313-332756 - 42 1.79e-05 TGGGTTTAGA ATTGTATGGGTG CAGCAAGGAA chrXVI:520140-520552 - 69 1.79e-05 TTCCTCCGGC GAGGCCTGGGTG GAACACTCAG chrXII:897687-898050 - 44 1.79e-05 GGGTTTTTTG GAGGTACAGGTG TTGTAGAATT chrXVI:653851-654060 - 37 1.79e-05 AAAATTTCTA AATGTACGGATT CTTTGAAAAT chrXII:202621-203031 - 38 1.79e-05 TTTTTTGATA AATGTACGGATT TAAAGCTGTC chrXIV:330807-331137 - 29 2.00e-05 TTTTACTTTA GATGTAAGGATG TAAGATCTCT chrXV:232047-232333 + 15 2.47e-05 CCTTGGCAAC CGTGTCTGGGTG TGTGATATAT chrVIII:296841-297236 - 70 2.71e-05 AGCATGCTGT GATGTACTGGTG GACGAAATTG chrXV:866553-866985 + 37 2.99e-05 GCATTCTGGG TTTGTATGGGTG TTACACCGGT chrIII:178288-178691 - 52 2.99e-05 ACTTACGTGC GGTGTACGGACT TAATAAACAT chrXII:424043-424503 - 86 3.23e-05 AGC AATGTACGTGTG TAGCGACTTA chrV:236244-236654 - 3 3.23e-05 GCTGCCTTAA GAGGAATGGGTG CT chrXII:370451-371189 + 16 3.23e-05 CTAACCGTGT GGTTCATGGGTG GGCGAAGTGC chrXVI:821732-822142 - 61 3.47e-05 AAAAGCTACT TGTGTACAGATG AGATGACTAC chrXII:924533-924858 + 85 3.93e-05 CGGTACGGGC GGTGACTGGGTG CCAA chrXII:805525-805756 - 34 3.93e-05 CAAAATGTGA AATGTTCGGATG TTAAGCAGGC chrXIV:63089-63546 + 51 3.93e-05 GGGTTGCTAA AATGTTCGGATG TAAAGTAGTA chrXIII:797956-798190 - 22 4.27e-05 GCGATGCTGT GGTGCACGGCGG GTAACGGAAA chrXIII:652587-652895 + 20 4.67e-05 TTGAGCAGCA GATGTACAGCTG ATCTATAACT chrV:354739-355306 + 53 4.67e-05 GACATCATAC AGTGTATGTATG GGGTTAGGAG chrXIV:663885-664007 - 72 5.62e-05 TTTAGCGTGA GGTGTACAGAGG CCGCAGGGCT chrVIII:562221-562632 + 77 7.06e-05 ATAGATGTGA AAAGTGTGGGTG TGGTGTGTGG chrIII:162643-163053 - 57 7.49e-05 ATTAGACTAC TATGTGTGTGTG TGCGATACCC chrVII:879485-879895 - 22 8.43e-05 ATAGAAATAA GATGTACAGATC ATTATACGCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTGTAYGGRTG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrV:221552-221799 2.8e-08 87_[+3]_1 chrXV:960156-960566 2.8e-08 35_[-3]_53 chrII:681876-682214 2.8e-08 62_[-3]_26 chrVIII:382892-383344 8.9e-08 32_[+3]_56 chrXIII:296767-297224 8.9e-08 21_[-3]_67 chrVII:483319-483715 8.9e-08 80_[+3]_8 chrXVI:76304-76734 1.2e-07 73_[+3]_15 chrXII:1028205-1028599 1.3e-07 46_[-3]_42 chrX:545418-545518 1.3e-07 49_[+3]_39 chrVII:371202-371519 1.3e-07 45_[-3]_43 chrVI:95455-95890 1.6e-07 13_[+3]_75 chrXII:11011-11595 1.6e-07 16_[-3]_72 chrXII:1064802-1065383 1.6e-07 9_[+3]_79 chrVIII:556577-557250 1.6e-07 11_[+3]_77 chrV:6120-6552 1.6e-07 63_[-3]_25 chrXII:5416-5943 1.6e-07 37_[-3]_51 chrXIII:5287-5831 1.6e-07 34_[-3]_54 chrXIV:89845-90255 1.6e-07 42_[-3]_46 chrXIII:145890-146314 2.5e-07 32_[-3]_56 chrXVI:404575-404876 2.5e-07 31_[-3]_57 chrVII:149102-149520 2.5e-07 56_[+3]_32 chrVIII:125910-126331 3.6e-07 32_[-3]_56 chrXI:431314-431709 3.6e-07 33_[-3]_55 chrVII:10225-10432 3.6e-07 51_[-3]_37 chrIV:525112-525301 3.6e-07 46_[+3]_42 chrIII:163447-163909 4.2e-07 18_[+3]_70 chrX:607808-607908 5e-07 59_[-3]_29 chrII:592884-593274 5e-07 55_[+3]_33 chrX:157427-157527 5e-07 6_[+3]_82 chrV:85086-85519 6.3e-07 48_[-3]_40 chrIV:358089-358436 6.3e-07 36_[+3]_52 chrXII:932051-932504 6.3e-07 31_[+3]_57 chrV:69053-69370 7.1e-07 18_[+3]_70 chrI:81939-82287 8.4e-07 46_[+3]_42 chrIII:58728-59002 8.4e-07 56_[-3]_32 chrVII:856685-857040 1.4e-06 51_[+3]_37 chrII:415487-415880 1.4e-06 49_[+3]_39 chrIV:125392-125571 1.4e-06 46_[+3]_42 chrXVI:794491-794832 1.4e-06 44_[-3]_44 chrV:270351-270664 1.4e-06 30_[-3]_58 chrV:522758-523024 1.4e-06 61_[-3]_27 chrIX:254195-254585 1.6e-06 17_[+3]_71 chrIV:538837-539317 1.6e-06 78_[-3]_10 chrIX:382176-382414 1.6e-06 40_[+3]_48 chrXIII:732023-732416 1.6e-06 37_[-3]_51 chrV:396195-396591 1.6e-06 36_[-3]_52 chrXII:921668-922023 1.6e-06 44_[+3]_44 chrII:477037-477474 1.6e-06 29_[-3]_59 chrV:305778-306235 1.6e-06 29_[-3]_59 chrIV:411236-411659 1.6e-06 38_[-3]_50 chrXV:79753-80162 1.6e-06 40_[+3]_48 chrXVI:575203-575400 1.8e-06 49_[-3]_39 chrIV:1525203-1525694 1.8e-06 44_[+3]_44 chrXV:161111-161439 2.1e-06 20_[+3]_68 chrX:75341-75441 2.1e-06 58_[+3]_30 chrVII:438553-438932 2.1e-06 65_[+3]_23 chrIV:341246-341639 2.4e-06 50_[+3]_38 chrII:44990-45384 2.4e-06 33_[-3]_55 chrXI:108728-109123 2.4e-06 46_[-3]_42 chrXIII:225332-225766 2.4e-06 46_[-3]_42 chrXII:1012123-1012391 2.7e-06 31_[-3]_57 chrIV:1259656-1259822 2.7e-06 44_[+3]_44 chrIV:392615-392770 2.7e-06 17_[+3]_71 chrXV:92899-93354 3.1e-06 35_[+3]_53 chrV:53502-53939 3.1e-06 49_[-3]_39 chrXIII:754379-754775 3.1e-06 44_[+3]_44 chrXII:522140-522468 3.1e-06 49_[-3]_39 chrIV:1401251-1401611 3.1e-06 52_[-3]_36 chrXII:950167-950369 3.1e-06 52_[-3]_36 chrIV:1300922-1301371 3.1e-06 13_[-3]_75 chrXVI:731902-732319 3.5e-06 44_[-3]_44 chrXIII:552889-553207 3.5e-06 75_[-3]_13 chrV:140430-140907 3.5e-06 56_[+3]_32 chrVI:223882-224219 4.7e-06 56_[+3]_32 chrXII:282493-282883 4.7e-06 19_[-3]_69 chrVII:534779-535235 4.7e-06 46_[+3]_42 chrXII:673790-674266 4.7e-06 76_[-3]_12 chrXII:241615-242026 4.7e-06 37_[-3]_51 chrXII:781439-781856 4.7e-06 58_[+3]_30 chrX:90047-90147 5.2e-06 51_[-3]_37 chrII:236439-236849 5.2e-06 53_[-3]_35 chrI:68333-68576 5.2e-06 23_[-3]_65 chrXIII:756336-756594 5.2e-06 14_[+3]_74 chrXIV:763995-764324 5.2e-06 35_[+3]_53 chrXV:968079-968440 5.5e-06 59_[+3]_29 chrXV:882119-882425 5.5e-06 76_[-3]_12 chrV:321948-322177 6e-06 12_[+3]_76 chrV:423092-423500 6e-06 26_[-3]_62 chrIX:316121-316619 6.7e-06 32_[-3]_56 chrXI:362140-362550 6.7e-06 59_[-3]_29 chrXI:618792-619218 6.7e-06 55_[+3]_33 chrIX:257323-257720 8.5e-06 62_[-3]_26 chrXVI:135490-135784 8.5e-06 38_[+3]_50 chrXI:67753-68106 8.5e-06 34_[-3]_54 chrVII:788304-788748 8.5e-06 52_[+3]_36 chrXV:987236-987388 9.2e-06 24_[-3]_64 chrXIV:302318-302529 9.8e-06 48_[-3]_40 chrXV:1004077-1004450 9.8e-06 33_[+3]_55 chrIV:308003-308396 1e-05 55_[-3]_33 chrXVI:406185-406574 1e-05 42_[-3]_46 chrII:165013-165554 1.2e-05 24_[-3]_64 chrX:651239-651339 1.2e-05 61_[-3]_27 chrVIII:74932-75391 1.3e-05 42_[-3]_46 chrXIII:302800-303131 1.3e-05 49_[+3]_39 chrXIV:495174-495597 1.3e-05 59_[+3]_29 chrXI:158213-158616 1.5e-05 36_[-3]_52 chrXII:498511-498904 1.5e-05 16_[-3]_72 chrIV:599760-600226 1.7e-05 9_[-3]_79 chrXIII:124315-124701 1.7e-05 37_[-3]_51 chrII:332313-332756 1.8e-05 41_[-3]_47 chrXVI:520140-520552 1.8e-05 68_[-3]_20 chrXII:897687-898050 1.8e-05 43_[-3]_45 chrXVI:653851-654060 1.8e-05 36_[-3]_52 chrXII:202621-203031 1.8e-05 37_[-3]_51 chrXIV:330807-331137 2e-05 28_[-3]_60 chrXV:232047-232333 2.5e-05 14_[+3]_74 chrVIII:296841-297236 2.7e-05 69_[-3]_19 chrXV:866553-866985 3e-05 36_[+3]_52 chrIII:178288-178691 3e-05 51_[-3]_37 chrXII:424043-424503 3.2e-05 85_[-3]_3 chrV:236244-236654 3.2e-05 2_[-3]_86 chrXII:370451-371189 3.2e-05 15_[+3]_73 chrXVI:821732-822142 3.5e-05 60_[-3]_28 chrXII:924533-924858 3.9e-05 84_[+3]_4 chrXII:805525-805756 3.9e-05 33_[-3]_55 chrXIV:63089-63546 3.9e-05 50_[+3]_38 chrXIII:797956-798190 4.3e-05 21_[-3]_67 chrXIII:652587-652895 4.7e-05 19_[+3]_69 chrV:354739-355306 4.7e-05 52_[+3]_36 chrXIV:663885-664007 5.6e-05 71_[-3]_17 chrVIII:562221-562632 7.1e-05 76_[+3]_12 chrIII:162643-163053 7.5e-05 56_[-3]_32 chrVII:879485-879895 8.4e-05 21_[-3]_67 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTGTAYGGRTG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GRTGTAYGGRTG width=12 seqs=133 chrV:221552-221799 ( 88) GGTGTATGGGTG 1 chrXV:960156-960566 ( 36) GGTGTATGGGTG 1 chrII:681876-682214 ( 63) GGTGTATGGGTG 1 chrVIII:382892-383344 ( 33) GATGTATGGGTG 1 chrXIII:296767-297224 ( 22) GATGTATGGGTG 1 chrVII:483319-483715 ( 81) GATGTATGGGTG 1 chrXVI:76304-76734 ( 74) GATGTACGGGTG 1 chrXII:1028205-1028599 ( 47) GGTGCATGGGTG 1 chrX:545418-545518 ( 50) GGTGCATGGGTG 1 chrVII:371202-371519 ( 46) GGTGCATGGGTG 1 chrVI:95455-95890 ( 14) GGTGTGTGGGTG 1 chrXII:11011-11595 ( 17) GGTGTGTGGGTG 1 chrXII:1064802-1065383 ( 10) GGTGTGTGGGTG 1 chrVIII:556577-557250 ( 12) GGTGTGTGGGTG 1 chrV:6120-6552 ( 64) GGTGTGTGGGTG 1 chrXII:5416-5943 ( 38) GGTGTGTGGGTG 1 chrXIII:5287-5831 ( 35) GGTGTGTGGGTG 1 chrXIV:89845-90255 ( 43) GGTGTGTGGGTG 1 chrXIII:145890-146314 ( 33) GGTGTATGGATG 1 chrXVI:404575-404876 ( 32) GATGCATGGGTG 1 chrVII:149102-149520 ( 57) GGTGTATGGATG 1 chrVIII:125910-126331 ( 33) GGTGTACGGATG 1 chrXI:431314-431709 ( 34) AGTGTATGGGTG 1 chrVII:10225-10432 ( 52) GATGCACGGGTG 1 chrIV:525112-525301 ( 47) AGTGTATGGGTG 1 chrIII:163447-163909 ( 19) GGTGCGTGGGTG 1 chrX:607808-607908 ( 60) GATGTATGGATG 1 chrII:592884-593274 ( 56) GATGTATGGATG 1 chrX:157427-157527 ( 7) GATGTATGGATG 1 chrV:85086-85519 ( 49) GGGGTATGGGTG 1 chrIV:358089-358436 ( 37) AATGTATGGGTG 1 chrXII:932051-932504 ( 32) GATGTACGGATG 1 chrV:69053-69370 ( 19) GGGGTACGGGTG 1 chrI:81939-82287 ( 47) GGTGCACGGATG 1 chrIII:58728-59002 ( 57) GGTGCACGGATG 1 chrVII:856685-857040 ( 52) GGTGTATGGGCG 1 chrII:415487-415880 ( 50) AATGCATGGGTG 1 chrIV:125392-125571 ( 47) GGTGTATGGGTT 1 chrXVI:794491-794832 ( 45) TATGTATGGGTG 1 chrV:270351-270664 ( 31) TATGTATGGGTG 1 chrV:522758-523024 ( 62) GGTGTATGGGCG 1 chrIX:254195-254585 ( 18) AATGTGTGGGTG 1 chrIV:538837-539317 ( 79) GGGGTGTGGGTG 1 chrIX:382176-382414 ( 41) AATGTGTGGGTG 1 chrXIII:732023-732416 ( 38) GATGTGCGGATG 1 chrV:396195-396591 ( 37) AGTGTACGGATG 1 chrXII:921668-922023 ( 45) GGGGCACGGGTG 1 chrII:477037-477474 ( 30) AATGTGTGGGTG 1 chrV:305778-306235 ( 30) AATGTGTGGGTG 1 chrIV:411236-411659 ( 39) GGGGTGTGGGTG 1 chrXV:79753-80162 ( 41) TATGTACGGGTG 1 chrXVI:575203-575400 ( 50) TGTGTGTGGGTG 1 chrIV:1525203-1525694 ( 45) TGTGTGTGGGTG 1 chrXV:161111-161439 ( 21) GATGTATGGGTT 1 chrX:75341-75441 ( 59) GATGTATGGGCG 1 chrVII:438553-438932 ( 66) AATGTATGGATG 1 chrIV:341246-341639 ( 51) AATGTACGGATG 1 chrII:44990-45384 ( 34) AATGTACGGATG 1 chrXI:108728-109123 ( 47) AATGTACGGATG 1 chrXIII:225332-225766 ( 47) AATGTACGGATG 1 chrXII:1012123-1012391 ( 32) GGTGCATGGGTT 1 chrIV:1259656-1259822 ( 45) GGTGCATGGGTT 1 chrIV:392615-392770 ( 18) TATGCATGGGTG 1 chrXV:92899-93354 ( 36) TGTGTACGGATG 1 chrV:53502-53939 ( 50) TATGTGTGGGTG 1 chrXIII:754379-754775 ( 45) GATGTATGGGGG 1 chrXII:522140-522468 ( 50) TGTGTACGGATG 1 chrIV:1401251-1401611 ( 53) TATGTGTGGGTG 1 chrXII:950167-950369 ( 53) GGTGTGTGGGTT 1 chrIV:1300922-1301371 ( 14) AGTGCACGGATG 1 chrXVI:731902-732319 ( 45) AAGGTATGGGTG 1 chrXIII:552889-553207 ( 76) GATGTATGGGTC 1 chrV:140430-140907 ( 57) AAGGTATGGGTG 1 chrVI:223882-224219 ( 57) TATGTACGGATG 1 chrXII:282493-282883 ( 20) GATGTACAGGTG 1 chrVII:534779-535235 ( 47) AATGCACGGATG 1 chrXII:673790-674266 ( 77) GGTGCATGGGTC 1 chrXII:241615-242026 ( 38) TATGTACGGATG 1 chrXII:781439-781856 ( 59) AATGCACGGATG 1 chrX:90047-90147 ( 52) CATGTATGGGTG 1 chrII:236439-236849 ( 54) AGTGTCTGGGTG 1 chrI:68333-68576 ( 24) GGTGCATGGCTG 1 chrXIII:756336-756594 ( 15) GGTGTGTGGGTC 1 chrXIV:763995-764324 ( 36) AGTGTCTGGGTG 1 chrXV:968079-968440 ( 60) GGTGCGTGGGCG 1 chrXV:882119-882425 ( 77) GGTGCACAGGTG 1 chrV:321948-322177 ( 13) GATGTTTGGGTG 1 chrV:423092-423500 ( 27) GGTGTACGGAGG 1 chrIX:316121-316619 ( 33) AATGTATGGGTT 1 chrXI:362140-362550 ( 60) CGTGCACGGGTG 1 chrXI:618792-619218 ( 56) GAGGCACGGATG 1 chrIX:257323-257720 ( 63) GGTGTACAGATG 1 chrXVI:135490-135784 ( 39) GGTGCACGGATT 1 chrXI:67753-68106 ( 35) GGTGCACGGATT 1 chrVII:788304-788748 ( 53) TATGCACGGATG 1 chrXV:987236-987388 ( 25) GATGTGCGGCTG 1 chrXIV:302318-302529 ( 49) AAGGTATGGATG 1 chrXV:1004077-1004450 ( 34) GGTGCAAGGGTG 1 chrIV:308003-308396 ( 56) AATGTATGGGTC 1 chrXVI:406185-406574 ( 43) AAGGTACGGATG 1 chrII:165013-165554 ( 25) GGTGTATGGGCT 1 chrX:651239-651339 ( 62) TATGTATGGGTT 1 chrVIII:74932-75391 ( 43) AATGTACAGGTG 1 chrXIII:302800-303131 ( 50) GGGGTGTGGGCG 1 chrXIV:495174-495597 ( 60) AGTGTACGGATT 1 chrXI:158213-158616 ( 37) TGTGCACGGGTT 1 chrXII:498511-498904 ( 17) GATGCACGGAGG 1 chrIV:599760-600226 ( 10) GATGCATGGATC 1 chrXIII:124315-124701 ( 38) AATGTATGGATT 1 chrII:332313-332756 ( 42) ATTGTATGGGTG 1 chrXVI:520140-520552 ( 69) GAGGCCTGGGTG 1 chrXII:897687-898050 ( 44) GAGGTACAGGTG 1 chrXVI:653851-654060 ( 37) AATGTACGGATT 1 chrXII:202621-203031 ( 38) AATGTACGGATT 1 chrXIV:330807-331137 ( 29) GATGTAAGGATG 1 chrXV:232047-232333 ( 15) CGTGTCTGGGTG 1 chrVIII:296841-297236 ( 70) GATGTACTGGTG 1 chrXV:866553-866985 ( 37) TTTGTATGGGTG 1 chrIII:178288-178691 ( 52) GGTGTACGGACT 1 chrXII:424043-424503 ( 86) AATGTACGTGTG 1 chrV:236244-236654 ( 3) GAGGAATGGGTG 1 chrXII:370451-371189 ( 16) GGTTCATGGGTG 1 chrXVI:821732-822142 ( 61) TGTGTACAGATG 1 chrXII:924533-924858 ( 85) GGTGACTGGGTG 1 chrXII:805525-805756 ( 34) AATGTTCGGATG 1 chrXIV:63089-63546 ( 51) AATGTTCGGATG 1 chrXIII:797956-798190 ( 22) GGTGCACGGCGG 1 chrXIII:652587-652895 ( 20) GATGTACAGCTG 1 chrV:354739-355306 ( 53) AGTGTATGTATG 1 chrXIV:663885-664007 ( 72) GGTGTACAGAGG 1 chrVIII:562221-562632 ( 77) AAAGTGTGGGTG 1 chrIII:162643-163053 ( 57) TATGTGTGTGTG 1 chrVII:879485-879895 ( 22) GATGTACAGATC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTGTAYGGRTG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 52243 bayes= 9.96553 E= 1.6e-152 -18 -311 156 -118 72 -1370 131 -434 -534 -1370 -88 154 -1370 -1370 235 -534 -434 31 -1370 128 127 -237 6 -376 -434 95 -1370 99 -218 -1370 225 -534 -1370 -1370 233 -376 15 -269 170 -1370 -1370 -188 -237 157 -1370 -211 210 -135 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTGTAYGGRTG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 133 E= 1.6e-152 0.270677 0.022556 0.571429 0.135338 0.503759 0.000000 0.481203 0.015038 0.007519 0.000000 0.105263 0.887218 0.000000 0.000000 0.992481 0.007519 0.015038 0.240602 0.000000 0.744361 0.736842 0.037594 0.203008 0.022556 0.015038 0.375940 0.000000 0.609023 0.067669 0.000000 0.924812 0.007519 0.000000 0.000000 0.977444 0.022556 0.338346 0.030075 0.631579 0.000000 0.000000 0.052632 0.037594 0.909774 0.000000 0.045113 0.834586 0.120301 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTGTAYGGRTG MEME-3 regular expression -------------------------------------------------------------------------------- [GA][AG]TG[TC][AG][TC]GG[GA]TG -------------------------------------------------------------------------------- Time 912.85 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:781439-781856 1.30e-02 58_[+3(4.74e-06)]_30 chrV:77530-77890 9.22e-01 100 chrXIV:89845-90255 2.70e-04 42_[-3(1.63e-07)]_46 chrXIV:102535-102901 2.55e-04 52_[+1(6.01e-08)]_28 chrI:28535-28839 9.41e-01 100 chrXII:932051-932504 2.68e-03 31_[+3(6.26e-07)]_4_[+3(6.26e-07)]_\ 13_[+3(4.74e-06)]_16 chrXII:366061-366498 3.17e-02 53_[-2(9.42e-05)]_22 chrVIII:17173-17583 7.10e-01 100 chrXV:987236-987388 1.75e-03 24_[-3(9.24e-06)]_64 chrXII:656807-657189 1.09e-05 33_[-1(3.01e-09)]_47 chrXII:84068-84484 3.77e-01 100 chrXII:704241-704609 2.42e-01 100 chrXV:671038-671443 8.43e-01 100 chrXV:79753-80162 4.25e-03 18_[+3(2.47e-05)]_10_[+3(1.64e-06)]_\ 48 chrX:73380-73480 4.23e-01 100 chrX:542775-542875 7.50e-07 10_[-2(6.01e-08)]_28_[-1(5.11e-06)]_\ 17 chrXIII:91587-92098 4.85e-01 100 chrXV:226471-226860 2.39e-09 6_[-2(4.66e-10)]_10_[-1(1.43e-06)]_\ 39 chrV:354739-355306 7.58e-02 52_[+3(4.67e-05)]_36 chrIV:1175643-1176044 1.69e-08 40_[+1(2.32e-06)]_12_[+2(6.55e-09)]_\ 3 chrV:522758-523024 4.56e-03 61_[-3(1.38e-06)]_27 chrVIII:132916-133306 1.85e-06 21_[-1(1.56e-10)]_59 chrIV:411236-411659 1.29e-03 38_[-3(1.64e-06)]_16_[-3(4.27e-05)]_\ 22 chrXIV:763995-764324 3.60e-03 35_[+3(5.17e-06)]_53 chrX:228321-228421 9.61e-01 100 chrV:305778-306235 3.70e-03 29_[-3(1.64e-06)]_4_[-3(2.99e-05)]_\ 43 chrV:223114-223524 2.79e-01 100 chrVII:413371-413649 2.73e-01 100 chrVIII:134135-134515 4.94e-04 50_[+1(8.22e-06)]_30 chrIII:138787-139197 6.30e-01 100 chrIV:525112-525301 5.37e-04 46_[+3(3.63e-07)]_42 chrVII:738940-739348 2.69e-13 32_[+1(1.96e-09)]_13_[+2(1.36e-11)]_\ 10 chrVII:882850-882997 2.32e-01 100 chrII:60800-61267 2.38e-01 100 chrV:140430-140907 1.55e-02 56_[+3(3.48e-06)]_18_[+3(5.01e-05)]_\ 2 chrIV:1492270-1492680 2.79e-01 100 chrIV:434040-434531 1.14e-10 39_[-2(3.18e-10)]_12_[-1(4.44e-08)]_\ 4 chrVII:648207-648367 3.66e-01 100 chrXI:578771-579259 6.04e-12 4_[+1(3.24e-08)]_35_[+2(7.95e-11)]_\ 16 chrVII:609605-610065 2.35e-01 100 chrXII:687668-688105 1.04e-08 33_[-2(2.32e-08)]_13_[-1(8.07e-08)]_\ 9 chrXV:109514-110077 6.82e-01 100 chrIV:1461567-1462030 2.22e-04 56_[-1(1.84e-07)]_24 chrVII:366066-366516 9.65e-02 100 chrXV:383209-383451 9.91e-01 100 chrXIII:761864-762169 8.35e-01 100 chrVII:557608-558018 7.42e-02 100 chrI:143321-143511 7.21e-01 100 chrXII:605165-605607 1.59e-05 71_[-1(4.55e-09)]_9 chrVII:278326-278736 9.43e-01 100 chrIX:439081-439385 8.07e-01 100 chrIV:488535-489076 6.86e-06 52_[-2(1.38e-08)]_23 chrXIII:25410-25630 4.12e-01 100 chrII:301418-301595 4.72e-01 100 chrXII:784170-784589 5.52e-06 29_[+1(2.43e-09)]_51 chrXV:779682-780956 9.21e-01 100 chrIV:1278650-1279010 1.61e-01 100 chrX:197186-197286 9.21e-06 32_[-1(3.01e-09)]_48 chrXII:202621-203031 7.00e-02 37_[-3(1.79e-05)]_51 chrV:492200-492607 1.04e-10 9_[-2(9.65e-10)]_12_[-1(1.67e-08)]_\ 34 chrIV:1080509-1080895 8.74e-01 100 chrXII:86912-87142 6.02e-01 100 chrVII:1050223-1050508 4.52e-01 100 chrVII:483319-483715 1.32e-07 11_[+2(3.84e-07)]_44_[+3(8.91e-08)]_\ 8 chrV:443101-443479 3.61e-05 10_[-1(1.96e-09)]_70 chrXIV:96053-96504 2.55e-07 23_[-2(7.21e-09)]_11_[-1(1.47e-05)]_\ 21 chrVII:541667-542130 5.11e-08 37_[+2(1.23e-10)]_38 chrX:294485-294585 5.09e-01 100 chrXII:39547-39728 7.14e-01 100 chrXIV:716201-716518 8.61e-01 100 chrV:377876-378115 4.43e-02 100 chrX:354057-354157 3.65e-03 34_[+1(5.11e-06)]_46 chrXIII:253337-253610 6.83e-01 100 chrIV:76841-77141 4.57e-01 100 chrXVI:587362-587563 2.02e-01 100 chrXIII:225332-225766 3.03e-03 33_[-3(4.74e-06)]_1_[-3(2.37e-06)]_\ 42 chrX:531639-531739 5.96e-01 100 chrXIII:797956-798190 4.48e-02 21_[-3(4.27e-05)]_67 chrXI:313239-313651 2.88e-06 16_[-2(1.07e-07)]_11_[-1(7.62e-06)]_\ 28 chrXIII:756336-756594 1.16e-02 14_[+3(5.17e-06)]_74 chrVIII:358344-358748 1.32e-03 48_[-1(3.05e-07)]_32 chrIII:137976-138386 1.01e-02 13_[+1(1.47e-05)]_67 chrXIII:768209-768624 1.47e-11 13_[-2(1.22e-09)]_12_[-1(3.01e-09)]_\ 30 chrI:494-759 9.24e-01 100 chrXI:219692-220090 6.75e-06 58_[+1(3.01e-09)]_22 chrXV:832420-832715 9.98e-01 100 chrIV:45196-45606 2.98e-04 21_[+2(5.28e-06)]_54 chrVII:10225-10432 3.33e-04 51_[-3(3.63e-07)]_37 chrIV:1164320-1164730 3.22e-01 100 chrXI:162288-162735 9.99e-11 36_[-2(2.27e-11)]_11_[-1(1.74e-06)]_\ 8 chrX:157427-157527 3.36e-04 6_[+3(4.95e-07)]_5_[+3(4.08e-07)]_\ 65 chrXVI:678805-679304 3.06e-01 100 chrXII:1028888-1029298 9.11e-01 100 chrXIII:747768-748141 1.28e-03 34_[-1(1.74e-06)]_46 chrXII:1002220-1002630 9.51e-01 100 chrXVI:338724-339098 3.52e-03 33_[-1(3.97e-06)]_47 chrIII:315482-315892 5.54e-01 100 chrXIII:551339-551813 3.08e-03 1_[+3(6.26e-07)]_87 chrXII:48029-48439 6.01e-01 100 chrXIII:5287-5831 1.70e-03 34_[-3(1.63e-07)]_7_[-3(1.63e-07)]_\ 1_[-3(1.63e-07)]_22 chrXV:281983-282358 1.17e-04 48_[+1(1.43e-06)]_32 chrXIII:388331-388606 2.84e-01 100 chrV:101320-101730 5.29e-01 100 chrXV:445740-446105 5.49e-01 100 chrXIII:552889-553207 6.62e-04 75_[-3(3.48e-06)]_13 chrIV:1300922-1301371 1.65e-02 13_[-3(3.12e-06)]_3_[+3(3.68e-05)]_\ 60 chrIV:619811-620224 1.04e-10 12_[-2(9.65e-10)]_12_[-1(1.67e-08)]_\ 31 chrXVI:404832-405082 9.89e-01 100 chrIII:292661-292969 9.29e-01 100 chrXIII:752978-753388 9.40e-01 100 chrXVI:653851-654060 6.35e-02 36_[-3(1.79e-05)]_52 chrXVI:860196-860582 3.38e-09 44_[+1(1.43e-06)]_10_[+2(4.66e-10)]_\ 1 chrXI:379498-379870 9.30e-05 50_[+1(8.07e-08)]_30 chrIV:1525203-1525694 7.64e-03 4_[+3(9.24e-06)]_28_[+3(1.82e-06)]_\ 44 chrVII:930832-931214 3.30e-03 25_[-1(1.43e-06)]_55 chrXVI:575323-575733 7.47e-01 100 chrIX:256599-257009 7.90e-01 100 chrXIII:124315-124701 3.24e-02 37_[-3(1.65e-05)]_5_[+3(1.79e-05)]_\ 34 chrVI:191359-191796 1.42e-05 61_[-1(2.43e-09)]_19 chrXIII:163114-163524 5.60e-01 100 chrX:422754-422854 9.31e-08 34_[+1(2.32e-06)]_12_[+2(6.55e-09)]_\ 9 chrXII:950167-950369 1.13e-02 52_[-3(3.12e-06)]_36 chrXI:140851-141273 5.11e-08 16_[-2(1.23e-10)]_59 chrIV:1401251-1401611 1.05e-02 52_[-3(3.12e-06)]_36 chrXIV:6564-6936 5.17e-03 75_[-1(7.04e-06)]_5 chrVIII:562221-562632 1.09e-01 76_[+3(7.06e-05)]_12 chrXVI:579588-579998 7.27e-01 100 chrX:663853-663953 6.68e-01 100 chrVII:592517-592983 8.65e-01 100 chrXIV:632413-632807 3.80e-05 43_[+1(6.01e-08)]_37 chrVII:700479-701232 9.00e-01 100 chrXV:520-850 9.22e-01 100 chrXIV:63089-63546 2.23e-02 50_[+3(3.93e-05)]_38 chrXVI:406185-406574 1.99e-02 42_[-3(1.04e-05)]_46 chrXVI:942477-942633 1.66e-01 100 chrXIII:550680-551090 9.83e-01 100 chrXI:302733-303183 1.56e-03 14_[+1(3.97e-06)]_66 chrXIII:296767-297224 3.95e-04 21_[-3(8.91e-08)]_67 chrVII:28-236 2.00e-01 100 chrXV:903935-904579 6.56e-01 100 chrX:355188-355288 1.12e-09 6_[+2(2.27e-11)]_26_[+1(2.34e-05)]_\ 23 chrII:477037-477474 4.01e-03 10_[-3(2.35e-05)]_7_[-3(1.64e-06)]_\ 59 chrXII:921668-922023 3.01e-03 44_[+3(1.64e-06)]_44 chrV:174680-175029 4.05e-01 100 chrIV:591736-592146 1.59e-01 100 chrX:378166-378266 5.42e-09 40_[+1(8.07e-08)]_13_[+2(2.32e-08)]_\ 2 chrVII:287205-287634 4.13e-03 61_[-1(3.97e-06)]_19 chrIV:1345308-1345718 7.07e-01 100 chrII:266199-266634 1.24e-10 16_[+1(4.44e-08)]_12_[+2(3.18e-10)]_\ 27 chrXII:1061080-1061248 4.66e-03 32_[-1(1.19e-05)]_48 chrX:396618-396718 2.61e-03 23_[-1(1.43e-06)]_57 chrIII:305670-305873 4.41e-03 29_[-1(1.19e-05)]_51 chrXVI:280763-281258 1.96e-01 100 chrXIII:321007-321380 2.02e-11 14_[-2(1.22e-09)]_12_[-1(3.01e-09)]_\ 29 chrI:30-311 7.59e-03 29_[-1(1.19e-05)]_51 chrIV:217155-217575 4.96e-01 100 chrXIII:463368-463861 5.22e-04 25_[+2(1.07e-07)]_50 chrV:396195-396591 2.38e-03 36_[-3(1.64e-06)]_6_[-3(7.93e-05)]_\ 34 chrIV:541406-541778 9.22e-01 100 chrVII:328397-328900 9.18e-07 20_[+2(1.23e-10)]_55 chrVII:464-996 8.19e-02 100 chrXV:340140-340552 3.63e-11 13_[-2(9.65e-10)]_12_[-1(1.67e-08)]_\ 30 chrVII:876211-876646 7.04e-12 20_[+1(6.01e-08)]_12_[+2(2.27e-11)]_\ 23 chrXV:976234-976695 9.18e-08 11_[+1(2.32e-06)]_12_[+2(6.55e-09)]_\ 32 chrXII:809219-809543 9.28e-01 100 chrXVI:701884-702201 9.74e-01 100 chrXII:734617-734996 2.35e-05 50_[+1(1.96e-09)]_30 chrXII:522140-522468 1.01e-02 24_[-3(2.99e-05)]_13_[-3(3.12e-06)]_\ 39 chrXII:5416-5943 1.04e-03 37_[-3(1.63e-07)]_18_[-3(1.82e-06)]_\ 5_[-3(9.45e-07)]_4 chrV:18732-19133 8.64e-01 100 chrXI:326234-326572 9.14e-01 100 chrXI:258448-258963 1.33e-01 100 chrIII:107232-107642 4.73e-01 100 chrX:115776-115876 5.11e-08 14_[-2(1.23e-10)]_61 chrVIII:531592-531715 9.62e-01 100 chrXI:231119-231693 1.50e-01 100 chrVII:914852-915262 8.41e-01 100 chrIV:1507170-1507595 4.49e-01 100 chrIV:410197-410595 1.47e-11 37_[+1(3.01e-09)]_12_[+2(1.22e-09)]_\ 6 chrIV:1524641-1524913 8.81e-01 100 chrVII:346087-346520 8.80e-01 100 chrIX:174838-175292 1.21e-10 20_[+1(4.44e-08)]_12_[+2(3.18e-10)]_\ 23 chrV:551140-551516 2.50e-13 17_[-2(1.36e-11)]_13_[-1(1.96e-09)]_\ 25 chrXV:88265-88675 9.70e-02 100 chrXIII:431730-432140 9.12e-03 16_[+3(7.93e-05)]_72 chrVII:278122-278532 3.45e-01 100 chrIX:380400-380908 8.27e-01 100 chrXIII:914984-915289 9.38e-01 100 chrXIV:88959-89594 5.75e-01 100 chrXV:391559-392013 6.45e-01 100 chrVI:224937-225151 5.22e-01 100 chrVII:323769-324069 6.94e-01 100 chrIII:315841-316069 5.65e-01 100 chrXVI:622365-622836 1.84e-08 [-2(1.95e-08)]_31_[-1(3.05e-07)]_24 chrIII:162643-163053 8.53e-02 54_[-3(5.62e-05)]_34 chrXII:370451-371189 4.86e-02 15_[+3(3.23e-05)]_73 chrXVI:572083-572539 5.11e-10 12_[+1(1.43e-06)]_10_[+2(4.66e-10)]_\ 33 chrVII:531444-531832 5.90e-06 26_[+1(2.34e-05)]_11_[+2(1.07e-07)]_\ 18 chrXV:443647-444057 4.29e-02 100 chrVII:1083696-1083896 6.97e-01 100 chrI:68333-68576 1.02e-02 23_[-3(5.17e-06)]_65 chrXIII:23906-24081 2.61e-01 100 chrXIII:352092-352484 8.01e-04 46_[+1(3.05e-07)]_34 chrII:592884-593274 3.52e-03 38_[+3(4.67e-05)]_5_[+3(4.95e-07)]_\ 33 chrIV:1256902-1257262 2.84e-03 22_[-1(1.43e-06)]_58 chrVII:857246-857661 2.88e-04 63_[-1(1.84e-07)]_17 chrVII:422896-423350 2.88e-04 23_[+1(1.84e-07)]_57 chrXV:505862-506272 8.16e-02 100 chrXII:952868-953278 4.82e-01 100 chrVII:882490-882868 1.73e-01 100 chrVIII:466783-467180 7.00e-03 63_[+1(9.51e-07)]_17 chrM:61039-61322 6.12e-01 100 chrX:139235-139335 7.75e-01 100 chrXII:949575-949814 8.57e-01 100 chrIII:178288-178691 6.95e-02 32_[+3(2.99e-05)]_7_[-3(2.99e-05)]_\ 37 chrXVI:377098-377508 7.03e-01 100 chrV:42142-42443 3.97e-01 100 chrVI:64174-64584 5.29e-01 100 chrXVI:821732-822142 8.90e-02 60_[-3(3.47e-05)]_28 chrIV:721698-722180 4.29e-02 100 chrVII:788304-788748 2.64e-02 52_[+3(8.49e-06)]_36 chrIX:388242-388499 9.96e-01 100 chrX:424307-424407 2.38e-05 31_[-1(8.10e-09)]_49 chrIV:386002-386173 6.84e-01 100 chrX:538367-538467 2.88e-03 50_[+1(9.51e-07)]_30 chrIII:11085-11395 8.34e-02 100 chrXVI:880139-880555 2.69e-13 9_[-2(1.36e-11)]_13_[-1(1.96e-09)]_\ 33 chrXIV:495174-495597 2.31e-02 42_[+3(2.35e-05)]_5_[+3(1.32e-05)]_\ 29 chrXV:82358-82768 5.66e-01 100 chrXVI:731902-732319 4.25e-03 44_[-3(3.48e-06)]_44 chrXV:729554-729964 9.31e-01 100 chrI:190134-190444 4.07e-01 100 chrXVI:744105-744501 5.60e-08 35_[+1(9.51e-07)]_11_[+2(6.98e-08)]_\ 9 chrV:6120-6552 8.31e-04 19_[-3(5.29e-05)]_20_[-3(9.24e-06)]_\ [-3(1.63e-07)]_25 chrXI:108728-109123 7.97e-03 28_[-3(4.27e-05)]_6_[-3(2.37e-06)]_\ 42 chrIV:1402810-1403194 4.91e-01 100 chrXIII:297820-298864 7.35e-01 100 chrXIII:861152-861425 3.93e-01 100 chrII:226890-227365 3.06e-07 2_[+1(1.56e-10)]_78 chrV:61633-62143 3.11e-07 62_[-2(4.66e-10)]_13 chrIV:720560-720970 3.43e-02 35_[-1(1.37e-05)]_45 chrXII:498511-498904 4.98e-02 16_[-3(1.52e-05)]_72 chrV:570088-570498 5.18e-01 100 chrXI:74438-74845 5.65e-09 37_[+1(6.01e-08)]_13_[+2(1.38e-08)]_\ 5 chrIV:491594-492004 4.46e-01 100 chrXIII:302800-303131 1.71e-02 49_[+3(1.32e-05)]_39 chrIII:168160-168570 4.94e-04 32_[-1(8.22e-06)]_48 chrXV:989110-989589 2.17e-01 100 chrIX:427193-427510 9.93e-01 100 chrXIII:652587-652895 1.20e-02 19_[+3(4.67e-05)]_69 chrXI:517263-517537 9.11e-01 100 chrXII:241615-242026 2.19e-02 37_[-3(4.74e-06)]_9_[-3(1.18e-05)]_\ 30 chrXII:1004390-1004800 9.98e-01 100 chrVII:438553-438932 1.16e-03 42_[+3(1.42e-05)]_11_[+3(2.11e-06)]_\ 23 chrII:681876-682214 4.03e-04 62_[-3(2.77e-08)]_26 chrV:423092-423500 1.58e-02 26_[-3(5.99e-06)]_62 chrXV:623485-623596 8.04e-01 100 chrVIII:103889-104266 1.71e-01 30_[-3(6.58e-05)]_58 chrV:299994-300404 4.17e-01 100 chrXIII:410335-410745 1.08e-01 100 chrXIV:585857-586372 4.20e-01 100 chrVIII:85188-85554 3.07e-04 25_[-1(8.07e-08)]_55 chrVII:774166-774668 1.65e-05 18_[+2(1.22e-09)]_57 chrXII:1018952-1019369 1.28e-01 32_[+3(7.93e-05)]_56 chrIII:137770-138180 8.92e-02 100 chrXVI:114620-115030 2.55e-01 100 chrVII:986810-987717 2.28e-01 100 chrIV:437594-437979 2.98e-06 40_[+1(1.56e-10)]_40 chrXV:29-486 8.45e-02 77_[-1(8.82e-05)]_3 chrVIII:475521-475949 3.69e-06 31_[-2(1.05e-08)]_44 chrIV:1354600-1355010 5.76e-01 100 chrII:405689-406159 9.99e-11 8_[+1(1.74e-06)]_11_[+2(2.27e-11)]_\ 36 chrIII:227761-228187 2.67e-05 22_[+1(2.43e-09)]_58 chrVII:311885-312187 5.11e-01 100 chrXII:589074-589250 4.27e-01 100 chrXIV:783753-784182 3.52e-01 100 chrXV:445053-445254 9.30e-02 100 chrII:392658-393068 6.28e-01 100 chrXV:882119-882425 2.36e-02 76_[-3(5.54e-06)]_12 chrXII:214757-215142 2.94e-05 31_[-1(8.10e-09)]_49 chrII:88093-88486 9.98e-01 100 chrXI:431314-431709 1.33e-03 33_[-3(3.63e-07)]_55 chrVII:625172-625573 3.62e-01 100 chrVII:1000194-1000613 1.81e-01 100 chrXI:202808-203248 7.04e-12 25_[+1(6.01e-08)]_12_[+2(2.27e-11)]_\ 18 chrIII:58728-59002 8.83e-04 56_[-3(8.43e-07)]_32 chrVI:137333-137739 5.65e-09 10_[-2(1.38e-08)]_13_[-1(6.01e-08)]_\ 32 chrVIII:452679-452903 8.56e-01 100 chrXV:520606-520970 1.30e-01 100 chrV:237573-237983 3.88e-01 100 chrXVI:560042-560483 7.34e-04 52_[-1(3.05e-07)]_28 chrIX:388635-388938 8.14e-01 100 chrV:99941-100364 1.80e-06 35_[+1(3.97e-06)]_11_[+2(1.07e-07)]_\ 9 chrII:236439-236849 1.53e-03 53_[-3(5.17e-06)]_35 chrVIII:292817-293227 6.43e-01 100 chrVII:364033-364443 8.43e-01 100 chrXIII:732023-732416 2.00e-03 37_[-3(1.64e-06)]_3_[+3(9.76e-06)]_\ 36 chrXII:489235-489593 2.33e-02 31_[+1(1.81e-05)]_8_[+1(4.03e-05)]_\ 21 chrXV:619261-619520 1.01e-02 19_[-1(3.80e-05)]_61 chrXII:426947-427340 5.90e-06 43_[+1(2.34e-05)]_11_[+2(1.07e-07)]_\ 1 chrIX:131844-132095 3.09e-01 100 chrV:270351-270664 9.06e-03 30_[-3(1.38e-06)]_27_[-3(7.06e-05)]_\ 19 chrIV:722369-722765 7.32e-01 100 chrIV:884178-884609 1.59e-05 22_[+1(4.55e-09)]_58 chrXVI:575203-575400 1.01e-02 49_[-3(1.82e-06)]_39 chrXIV:330807-331137 3.31e-02 28_[-3(2.00e-05)]_60 chrIII:1022-1312 3.32e-01 100 chrXI:618792-619218 5.78e-04 28_[-3(4.27e-05)]_15_[+3(6.70e-06)]_\ 33 chrVII:1049483-1049893 2.42e-01 100 chrXII:805525-805756 6.25e-02 33_[-3(3.93e-05)]_55 chrM:60464-60924 7.19e-01 100 chrXVI:431970-432116 3.87e-01 100 chrVIII:296841-297236 3.99e-02 46_[+3(4.27e-05)]_11_[-3(2.71e-05)]_\ 19 chrIX:197413-197774 8.71e-02 53_[+1(8.82e-05)]_27 chrXIII:306437-307119 3.44e-01 100 chrIX:324165-324560 5.90e-06 1_[-2(1.07e-07)]_11_[-1(2.34e-05)]_\ 43 chrXI:589931-590139 2.14e-01 100 chrXIII:267957-268254 6.13e-01 100 chrIV:1161590-1161921 1.09e-01 100 chrII:44990-45384 1.19e-02 33_[-3(2.37e-06)]_5_[+3(2.71e-05)]_\ 38 chrVII:149102-149520 1.61e-03 44_[+3(1.38e-06)]_[+3(2.46e-07)]_32 chrV:469273-469665 9.81e-09 42_[+1(8.07e-08)]_13_[+2(2.32e-08)] chrXII:728186-728601 1.31e-01 100 chrXII:637204-637317 5.38e-01 100 chrXII:794951-795119 9.12e-01 100 chrIII:177137-177547 5.45e-01 100 chrXII:369279-369652 1.86e-01 100 chrV:569670-569857 8.45e-01 100 chrXII:796982-797375 1.20e-01 100 chrIII:295278-295774 1.24e-10 12_[+1(4.44e-08)]_12_[+2(3.18e-10)]_\ 31 chrXV:1019007-1019417 4.03e-02 100 chrX:75341-75441 5.46e-03 16_[+3(6.70e-06)]_30_[+3(2.11e-06)]_\ 30 chrXV:631884-632067 7.82e-01 100 chrIV:44098-44508 5.82e-02 100 chrXI:355335-356060 9.39e-01 100 chrVIII:512079-512489 1.33e-01 4_[+3(9.12e-05)]_84 chrVIII:74932-75391 3.96e-02 42_[-3(1.32e-05)]_46 chrXII:673790-674266 2.86e-03 76_[-3(4.74e-06)]_12 chrIV:341246-341639 4.46e-03 50_[+3(2.37e-06)]_38 chrVIII:381674-381943 6.66e-01 100 chrII:36216-36617 5.79e-04 36_[+1(3.05e-07)]_44 chrXIII:362881-363276 3.33e-06 40_[+1(7.62e-06)]_11_[+2(1.07e-07)]_\ 4 chrX:607808-607908 4.25e-04 59_[-3(4.95e-07)]_6_[-3(1.18e-05)]_\ 11 chrV:141038-141452 6.88e-01 100 chrXI:216886-217047 6.73e-01 100 chrXIII:420454-420854 8.47e-05 32_[-1(8.07e-08)]_48 chrI:81939-82287 1.08e-03 46_[+3(8.43e-07)]_42 chrXV:384744-385048 7.36e-01 100 chrXIII:372319-372701 3.55e-04 33_[-1(8.07e-08)]_47 chrV:122151-122561 4.22e-01 100 chrX:651239-651339 3.97e-02 61_[-3(1.18e-05)]_27 chrV:236244-236654 1.45e-02 2_[-3(3.23e-05)]_86 chrXV:288013-288401 3.11e-03 39_[+1(5.11e-06)]_41 chrV:407828-408238 3.65e-01 100 chrVII:883770-883888 4.49e-01 100 chrVII:472479-472696 7.07e-01 100 chrVIII:452078-452323 2.61e-01 100 chrXV:968079-968440 1.90e-03 59_[+3(5.54e-06)]_29 chrV:101062-101472 9.53e-01 100 chrXII:875189-875605 2.60e-04 33_[+1(3.24e-08)]_47 chrX:123510-123610 4.11e-01 100 chrIV:1329022-1329432 4.24e-01 100 chrXI:665920-666219 8.69e-01 100 chrXI:362140-362550 1.88e-03 59_[-3(6.70e-06)]_29 chrII:373085-373429 1.65e-01 100 chrV:424696-425106 6.63e-01 100 chrXIII:754379-754775 1.42e-02 44_[+3(3.12e-06)]_44 chrXIII:131663-132071 9.99e-11 18_[-2(2.27e-11)]_11_[-1(1.74e-06)]_\ 26 chrXIII:480479-480869 7.04e-12 7_[-2(2.27e-11)]_12_[-1(6.01e-08)]_\ 36 chrXIII:287485-287755 2.35e-01 100 chrXIII:626326-626736 1.00e-01 100 chrXIV:374698-375088 3.17e-04 30_[+1(1.61e-07)]_50 chrV:396870-397280 8.96e-01 100 chrXIII:540207-540920 9.69e-02 100 chrV:53502-53939 1.16e-02 49_[-3(3.12e-06)]_3_[+3(1.18e-05)]_\ 24 chrXV:1040536-1040774 1.93e-01 100 chrIV:1095187-1095639 1.46e-08 17_[-2(1.95e-08)]_31_[-1(1.61e-07)]_\ 7 chrVIII:146060-146497 1.22e-11 24_[-2(1.22e-09)]_12_[-1(3.01e-09)]_\ 19 chrIX:248610-249467 1.40e-01 100 chrIV:356658-357068 9.44e-01 100 chrXV:274478-274931 1.42e-05 23_[+1(2.43e-09)]_57 chrIV:44326-44736 6.08e-01 100 chrVIII:556577-557250 1.28e-03 11_[+3(1.63e-07)]_3_[+3(1.82e-06)]_\ 21_[+3(1.82e-06)]_2_[+3(1.82e-06)]_15 chrIX:382176-382414 5.39e-03 40_[+3(1.64e-06)]_48 chrV:438520-438896 7.56e-04 46_[+1(8.07e-08)]_34 chrVII:371202-371519 6.24e-04 45_[-3(1.34e-07)]_43 chrII:197309-197892 9.55e-01 100 chrVII:534779-535235 3.28e-03 29_[+3(3.68e-05)]_5_[+3(4.74e-06)]_\ 42 chrIV:765560-765970 3.56e-01 100 chrXV:92899-93354 9.49e-05 9_[+3(7.47e-06)]_14_[+3(3.12e-06)]_\ 53 chrX:606389-606489 1.10e-01 100 chrXIV:726008-726418 2.28e-05 29_[-1(8.10e-09)]_51 chrI:72630-72873 3.39e-01 100 chrV:117660-118289 5.71e-01 100 chrXVI:404575-404876 1.91e-03 31_[-3(2.46e-07)]_57 chrIV:1490120-1490324 4.98e-01 100 chrXI:67753-68106 1.34e-02 34_[-3(8.49e-06)]_54 chrXV:161111-161439 7.74e-03 20_[+3(2.11e-06)]_68 chrXI:163613-164023 8.28e-01 100 chrX:224082-224182 6.41e-01 100 chrXII:1064802-1065383 5.36e-04 9_[+3(1.63e-07)]_14_[+3(1.52e-05)]_\ 3_[+3(1.63e-07)]_14_[+3(9.24e-06)]_[+3(9.24e-06)] chrX:154523-154623 9.87e-01 100 chrVII:440533-441015 2.62e-08 2_[-2(1.95e-08)]_31_[-1(3.05e-07)]_\ 22 chrXII:940920-941330 1.75e-01 100 chrXI:283766-284176 6.17e-01 100 chrIX:336169-336595 5.90e-06 27_[-2(1.07e-07)]_11_[-1(2.34e-05)]_\ 17 chrXV:624056-624466 8.73e-01 100 chrV:441820-442623 8.35e-01 100 chrXII:628186-628647 4.07e-04 21_[+1(1.84e-07)]_59 chrIII:236479-236641 6.94e-01 100 chrX:90047-90147 2.49e-02 37_[-3(7.06e-05)]_2_[-3(5.17e-06)]_\ 37 chrV:152589-153078 7.27e-01 100 chrVIII:451490-451890 1.29e-01 100 chrXIV:783324-783532 7.53e-01 100 chrXII:234090-234272 4.01e-01 100 chrXV:762225-762442 7.41e-01 100 chrXII:11011-11595 8.02e-04 1_[-3(1.82e-06)]_3_[-3(1.63e-07)]_1_\ [-3(9.24e-06)]_5_[-3(1.63e-07)]_2_[-3(1.63e-07)]_13_[-3(1.82e-06)]_3 chrX:617732-617832 6.25e-06 30_[+1(3.01e-09)]_50 chrIX:28-295 7.90e-01 100 chrVII:122104-122529 7.04e-12 7_[+1(6.01e-08)]_12_[+2(2.27e-11)]_\ 36 chrXV:978763-979158 4.05e-02 27_[+3(5.01e-05)]_61 chrXII:962848-963249 4.00e-06 32_[-1(8.10e-09)]_48 chrXI:614863-615119 1.05e-01 100 chrM:59497-60091 7.73e-01 100 chrVII:736154-736569 9.99e-11 33_[+1(1.74e-06)]_11_[+2(2.27e-11)]_\ 11 chrXII:522691-523101 7.39e-01 100 chrVII:828504-828981 9.99e-11 41_[-2(2.27e-11)]_11_[-1(1.74e-06)]_\ 3 chrIV:392615-392770 7.99e-03 17_[+3(2.73e-06)]_71 chrVII:878595-878991 4.13e-03 47_[-1(3.97e-06)]_33 chrXII:924533-924858 4.47e-02 84_[+3(3.93e-05)]_4 chrXV:83217-83401 2.69e-03 25_[+1(7.04e-06)]_55 chrI:182399-182831 1.11e-06 13_[-1(1.56e-10)]_67 chrVIII:382272-382682 9.68e-01 100 chrXV:228141-228577 5.65e-09 26_[+1(6.01e-08)]_13_[+2(1.38e-08)]_\ 16 chrXI:158213-158616 5.89e-02 36_[-3(1.52e-05)]_52 chrII:9389-9784 4.64e-06 51_[+1(8.10e-09)]_29 chrV:61200-61389 9.17e-01 100 chrII:798853-799120 6.85e-01 100 chrXVI:450895-451305 6.00e-01 100 chrI:229430-229748 9.92e-01 100 chrX:227852-227952 8.67e-01 100 chrXV:960156-960566 1.83e-04 35_[-3(2.77e-08)]_53 chrII:6327-6608 7.64e-01 100 chrXIV:663885-664007 4.35e-02 71_[-3(5.62e-05)]_17 chrXII:1064342-1064559 9.95e-01 100 chrXIII:145890-146314 2.84e-04 32_[-3(2.46e-07)]_18_[-3(4.67e-05)]_\ 26 chrIII:123428-123820 1.69e-10 13_[-2(3.75e-12)]_11_[-1(1.93e-05)]_\ 31 chrIV:308003-308396 9.52e-03 55_[-3(1.04e-05)]_8_[-3(7.06e-05)]_\ 13 chrVII:706949-707373 5.08e-06 7_[-2(1.00e-07)]_11_[-1(1.93e-05)]_\ 37 chrXVI:794491-794832 5.89e-03 26_[-3(1.65e-05)]_6_[-3(1.38e-06)]_\ 44 chrII:408644-408782 3.63e-02 100 chrIII:163447-163909 3.78e-04 18_[+3(4.19e-07)]_18_[+3(5.62e-05)]_\ 40 chrII:165013-165554 3.81e-03 24_[-3(1.18e-05)]_64 chrIV:538837-539317 2.44e-04 78_[-3(1.64e-06)]_10 chrVI:204797-205189 2.56e-06 28_[-1(3.01e-09)]_52 chrIV:1013682-1014002 1.61e-01 100 chrXI:518843-519247 7.86e-03 33_[+3(6.58e-05)]_55 chrXVI:101055-101465 7.59e-02 16_[-2(6.27e-05)]_59 chrIV:125392-125571 2.53e-03 46_[+3(1.38e-06)]_42 chrIV:543633-543950 4.98e-01 100 chrXVI:645303-645689 6.69e-01 100 chrX:517665-517765 1.80e-06 13_[-2(1.07e-07)]_11_[-1(3.97e-06)]_\ 31 chrXI:308010-308403 3.21e-04 36_[-1(8.07e-08)]_44 chrXIII:289413-289823 2.25e-01 100 chrXII:282493-282883 2.27e-02 19_[-3(4.74e-06)]_5_[-3(2.35e-05)]_\ 52 chrXVI:135490-135784 2.97e-02 38_[+3(8.49e-06)]_50 chrXIV:631712-632097 1.81e-10 2_[-2(3.75e-12)]_11_[-1(1.93e-05)]_\ 42 chrXII:730133-730543 1.12e-01 100 chrI:180955-181434 1.23e-04 1_[+1(1.84e-07)]_79 chrXII:369572-370068 4.30e-01 100 chrXI:84018-84404 1.77e-06 51_[+1(8.10e-09)]_29 chrX:420973-421073 1.37e-01 100 chrXIV:503058-503410 9.57e-01 100 chrIV:520788-521168 4.94e-04 48_[+1(8.22e-06)]_32 chrXII:283254-283459 6.88e-01 100 chrVI:210484-210890 3.65e-03 45_[-1(5.11e-06)]_35 chrX:545418-545518 3.78e-05 49_[+3(1.34e-07)]_39 chrIV:1259656-1259822 1.15e-02 44_[+3(2.73e-06)]_44 chrIV:1305450-1305852 2.82e-07 33_[+1(1.56e-10)]_47 chrV:321948-322177 5.43e-03 12_[+3(5.99e-06)]_76 chrXII:737776-738050 7.96e-01 100 chrXII:201930-202041 9.80e-01 100 chrVIII:556151-556389 9.17e-01 100 chrXII:897687-898050 4.47e-02 43_[-3(1.79e-05)]_45 chrXVI:210071-210446 8.72e-02 100 chrI:198489-198715 8.95e-01 100 chrVII:1004049-1004419 5.60e-08 36_[+1(9.51e-07)]_11_[+2(6.98e-08)]_\ 8 chrX:415820-415920 4.40e-04 33_[-1(3.97e-06)]_47 chrXVI:775652-776023 2.88e-02 24_[-1(1.93e-05)]_56 chrII:159791-160039 4.16e-01 100 chrVII:205338-205756 1.71e-04 28_[+1(1.84e-07)]_52 chrXIII:183774-184147 2.73e-03 33_[-1(1.43e-06)]_47 chrX:156727-156827 2.69e-01 100 chrIV:45437-45847 2.44e-01 100 chrXIV:546906-547361 2.23e-03 15_[+1(1.43e-06)]_65 chrIII:142605-142953 2.76e-03 17_[-1(1.43e-06)]_63 chrXII:374172-374596 1.04e-10 25_[+1(1.67e-08)]_12_[+2(9.65e-10)]_\ 18 chrXV:594230-594615 8.55e-03 28_[-1(1.43e-06)]_52 chrVIII:115929-116379 1.10e-10 13_[-2(3.18e-10)]_12_[-1(4.44e-08)]_\ 30 chrIV:358089-358436 3.64e-03 36_[+3(6.26e-07)]_52 chrXIV:771890-772398 1.23e-01 100 chrXV:988459-988869 6.56e-02 79_[-1(4.03e-05)]_1 chrVIII:382892-383344 1.52e-04 32_[+3(8.91e-08)]_5_[+3(1.65e-05)]_\ 39 chrIV:599760-600226 6.23e-03 9_[-3(1.65e-05)]_79 chrXV:160585-160775 8.79e-01 100 chrVIII:5221-5443 7.35e-01 100 chrIII:308560-308970 3.27e-01 100 chrXII:424043-424503 3.80e-02 85_[-3(3.23e-05)]_3 chrXVI:76304-76734 1.57e-04 73_[+3(1.17e-07)]_15 chrVIII:125910-126331 1.38e-03 32_[-3(3.63e-07)]_56 chrVIII:379516-379926 1.29e-03 60_[-2(4.17e-06)]_15 chrXV:438458-438918 6.04e-12 9_[+1(3.24e-08)]_35_[+2(7.95e-11)]_\ 11 chrV:135228-135688 7.04e-12 27_[-2(2.27e-11)]_12_[-1(6.01e-08)]_\ 16 chrXII:1051957-1052320 7.29e-06 31_[-1(1.96e-09)]_49 chrXII:1028205-1028599 8.82e-04 46_[-3(1.34e-07)]_2_[+3(1.04e-05)]_\ 28 chrIX:254195-254585 1.64e-03 17_[+3(1.64e-06)]_71 chrXI:666352-666721 3.69e-01 100 chrIV:340293-340703 9.99e-01 100 chrXV:232047-232333 2.27e-02 14_[+3(2.47e-05)]_74 chrXV:464243-464673 1.39e-03 46_[+1(1.43e-06)]_34 chrXI:458374-458832 2.88e-04 8_[+1(1.84e-07)]_72 chrVII:115302-115748 6.04e-12 17_[+1(3.24e-08)]_35_[+2(7.95e-11)]_\ 3 chrV:69053-69370 9.75e-05 18_[+3(7.08e-07)]_70 chrXV:1004077-1004450 2.10e-02 33_[+3(9.76e-06)]_55 chrXII:731904-732309 6.25e-06 38_[+1(3.01e-09)]_42 chrXV:424172-424616 7.85e-02 25_[-1(3.59e-05)]_55 chrI:72084-72258 3.70e-01 100 chrXV:1049118-1049368 4.10e-01 100 chrI:185684-186046 7.60e-02 100 chrXV:854033-854443 7.45e-13 9_[-2(5.89e-11)]_12_[-1(8.10e-09)]_\ 34 chrXIV:721107-721517 8.72e-01 100 chrVII:766124-766508 5.39e-03 47_[-1(2.34e-05)]_33 chrIV:1362368-1362564 7.85e-01 100 chrII:235598-236008 8.90e-03 4_[-1(1.58e-05)]_76 chrXVI:520140-520552 2.57e-02 36_[+3(9.86e-05)]_20_[-3(1.79e-05)]_\ 20 chrIV:1352322-1352722 7.04e-12 4_[-2(2.27e-11)]_12_[-1(6.01e-08)]_\ 39 chrVII:544378-544836 5.90e-06 30_[-2(1.07e-07)]_11_[-1(2.34e-05)]_\ 14 chrXVI:581870-582269 1.75e-04 47_[+1(6.01e-08)]_33 chrVII:319593-320029 2.97e-06 24_[+1(7.62e-06)]_11_[+2(1.07e-07)]_\ 20 chrV:85086-85519 1.54e-03 19_[-3(2.71e-05)]_17_[-3(6.26e-07)]_\ 40 chrVII:110466-110896 3.35e-06 4_[-2(1.07e-07)]_11_[-1(7.62e-06)]_\ 40 chrXII:592368-592808 6.06e-06 56_[-1(3.01e-09)]_24 chrIX:325552-326014 8.67e-11 19_[+1(4.44e-08)]_12_[+2(3.18e-10)]_\ 24 chrXII:47826-48236 4.83e-01 100 chrVI:95455-95890 2.05e-04 13_[+3(1.63e-07)]_75 chrVIII:388752-389198 1.65e-03 45_[-1(1.43e-06)]_35 chrI:202583-202774 9.60e-01 100 chrV:569850-570260 1.00e-01 100 chrIX:257323-257720 1.10e-02 34_[-3(7.93e-05)]_16_[-3(8.49e-06)]_\ 26 chrII:415487-415880 3.18e-03 33_[+3(1.79e-05)]_4_[+3(1.38e-06)]_\ 39 chrVII:879485-879895 2.00e-01 21_[-3(8.43e-05)]_67 chrXV:571772-572167 4.83e-06 43_[+1(2.34e-05)]_11_[+2(1.07e-07)]_\ 1 chrIII:14371-14829 9.49e-01 100 chrXIV:302318-302529 4.38e-02 48_[-3(9.76e-06)]_40 chrV:207132-207584 3.09e-02 53_[+1(7.62e-06)]_27 chrXIII:751360-751525 1.07e-01 100 chrXIV:776743-777087 9.03e-01 100 chrVII:661540-661956 1.93e-04 55_[+1(9.51e-07)]_25 chrVII:401403-401794 5.59e-02 100 chrVI:223882-224219 1.96e-02 56_[+3(4.74e-06)]_32 chrVII:405276-405742 9.99e-11 15_[+1(1.74e-06)]_11_[+2(2.27e-11)]_\ 29 chrV:221552-221799 5.43e-05 87_[+3(2.77e-08)]_1 chrXV:796959-797326 5.13e-01 100 chrIX:316121-316619 1.85e-02 32_[-3(6.70e-06)]_56 chrV:250101-250513 4.60e-09 33_[+1(8.22e-06)]_11_[+2(9.65e-10)]_\ 11 chrIV:323029-323275 9.75e-01 100 chrXV:663654-664060 1.04e-08 15_[-2(2.32e-08)]_13_[-1(8.07e-08)]_\ 27 chrIII:228532-228942 7.63e-01 100 chrXIII:923415-923854 7.58e-01 100 chrII:332313-332756 5.45e-02 41_[-3(1.79e-05)]_47 chrXV:24529-24967 5.17e-01 100 chrVII:316916-317326 6.94e-01 100 chrXV:866553-866985 1.09e-02 19_[-3(5.62e-05)]_5_[+3(2.99e-05)]_\ 52 chrIV:509233-509643 4.19e-01 100 chrXVI:453506-453727 5.27e-01 100 chrXV:977121-977531 3.43e-01 100 chrXII:1012123-1012391 2.37e-03 31_[-3(2.73e-06)]_57 chrIX:255330-255740 3.87e-01 100 chrVII:480114-480668 5.60e-01 100 chrV:167307-167717 4.12e-01 100 chrIV:465179-465496 1.42e-01 100 chrXVI:856715-857108 4.94e-06 45_[+1(3.01e-09)]_35 chrVII:856685-857040 7.77e-04 51_[+3(1.38e-06)]_37 chrXV:159733-160148 6.92e-01 100 chrXIV:739271-739721 5.88e-01 100 chrXIII:306093-306461 8.40e-01 100 chrVII:702883-703288 8.65e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************