Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.027435 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.060199 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.083109 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.027827 Invoking: fasta-subsample /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/seqs-centered 600 -rest /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/seqs-discarded -seed 1 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/seqs-sampled Finished invoke: name: sample_seqs status: 0 time: 0.068702 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background Finished invoke: name: bg status: 0 time: 0.016817 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 893.396414 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/seqs-shuffled Finished invoke: name: dreme status: 0 time: 85.881611 Invoking: centrimo -seqlen 436 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.214174 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.388862 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background -primary SSCYYWAMCCACTVRRCCAHV /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.855936 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background -primary KTAAYCDKRAGRTCMBSGGTTCGAYY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.676121 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background -primary WACAYCCRTACAYY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.587971 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background -primary CAACTKGG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.339102 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background -primary RAARAAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.579208 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background -primary GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.333187 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background -primary CACGGW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.409476 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background -primary CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.355262 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background -primary GATTWGAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.329081 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background -primary ATCTK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.717163 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background -primary CCACACSC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.312678 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background -primary CACATYAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.303214 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background -primary AGTYATAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.242443 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background -primary CCATCGTK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.268509 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background -primary TAGTKTAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.275317 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background --motif SSCYYWAMCCACTVRRCCAHV /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa Finished invoke: name: fimo1 status: 0 time: 0.279529 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background --motif KTAAYCDKRAGRTCMBSGGTTCGAYY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa Finished invoke: name: fimo2 status: 0 time: 0.288759 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background --motif WACAYCCRTACAYY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa Finished invoke: name: fimo3 status: 0 time: 0.273093 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background --motif CAACTKGG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa Finished invoke: name: fimo4 status: 0 time: 0.158516 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background --motif RAARAAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa Finished invoke: name: fimo5 status: 0 time: 0.142319 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background --motif GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa Finished invoke: name: fimo6 status: 0 time: 0.16232 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background --motif CACGGW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa Finished invoke: name: fimo7 status: 0 time: 0.14283 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background --motif CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa Finished invoke: name: fimo8 status: 0 time: 0.159855 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background --motif GATTWGAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa Finished invoke: name: fimo9 status: 0 time: 0.161718 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background --motif ATCTK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa Finished invoke: name: fimo10 status: 0 time: 0.143699 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background --motif CCACACSC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa Finished invoke: name: fimo11 status: 0 time: 0.170605 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background --motif CACATYAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa Finished invoke: name: fimo12 status: 0 time: 0.179554 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background --motif AGTYATAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa Finished invoke: name: fimo13 status: 0 time: 0.162021 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background --motif CCATCGTK /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa Finished invoke: name: fimo14 status: 0 time: 0.166127 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/background --motif TAGTKTAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/BY4742--MSS11.fa Finished invoke: name: fimo15 status: 0 time: 0.166196 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MSS11/summary.tsv Finished invoke: name: summary status: 0 time: 0.255036 Done