Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.026099 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.059376 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.071725 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.013678 Invoking: fasta-subsample /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/seqs-centered 600 -rest /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/seqs-discarded -seed 1 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/seqs-sampled Finished invoke: name: sample_seqs status: 0 time: 0.066812 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background Finished invoke: name: bg status: 0 time: 0.012251 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 888.494132 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/seqs-shuffled Finished invoke: name: dreme status: 0 time: 80.008359 Invoking: centrimo -seqlen 390 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.231427 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.636631 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background -primary CSCHYWAMCMACTSGGCCAH /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.355832 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background -primary KTAAYCRDRRGRTCMBGGGTTCGABYCCS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.284376 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background -primary AASSDNRHRTGMTAACCAYTACACTATMDB /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.263382 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background -primary AMCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.351687 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background -primary CCCAYACA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.178584 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background -primary ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.224089 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background -primary TACCGW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.246078 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background -primary GAAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.327212 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background -primary CCTTASC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.231378 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background -primary GYGGTCTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.217688 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background -primary TGGCGYA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.22083 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background -primary AAAARAAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.199454 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background -primary CTCTMCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.197816 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background -primary GGAAATW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.210024 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background --motif CSCHYWAMCMACTSGGCCAH /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa Finished invoke: name: fimo1 status: 0 time: 0.255978 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background --motif KTAAYCRDRRGRTCMBGGGTTCGABYCCS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa Finished invoke: name: fimo2 status: 0 time: 0.266442 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background --motif AASSDNRHRTGMTAACCAYTACACTATMDB /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa Finished invoke: name: fimo3 status: 0 time: 0.255005 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background --motif AMCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa Finished invoke: name: fimo4 status: 0 time: 0.136945 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background --motif CCCAYACA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa Finished invoke: name: fimo5 status: 0 time: 0.155011 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background --motif ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa Finished invoke: name: fimo6 status: 0 time: 0.172292 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background --motif TACCGW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa Finished invoke: name: fimo7 status: 0 time: 0.162606 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background --motif GAAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa Finished invoke: name: fimo8 status: 0 time: 0.133926 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background --motif CCTTASC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa Finished invoke: name: fimo9 status: 0 time: 0.168447 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background --motif GYGGTCTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa Finished invoke: name: fimo10 status: 0 time: 0.187719 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background --motif TGGCGYA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa Finished invoke: name: fimo11 status: 0 time: 0.158355 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background --motif AAAARAAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa Finished invoke: name: fimo12 status: 0 time: 0.164032 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background --motif CTCTMCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa Finished invoke: name: fimo13 status: 0 time: 0.165253 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background --motif GGAAATW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/BY4742--MCM1.fa Finished invoke: name: fimo14 status: 0 time: 0.155147 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/summary.tsv Finished invoke: name: summary status: 0 time: 0.190493 Done