******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrXIV:96105-96554 1.0000 100 chrVII:310568-310837 1.0000 100 chrXII:809922-810312 1.0000 100 chrXIII:372335-372657 1.0000 100 chrIV:1403070-1403254 1.0000 100 chrXI:518817-519337 1.0000 100 chrXIV:567950-568334 1.0000 100 chrXV:159467-160311 1.0000 100 chrXIII:296842-297064 1.0000 100 chrXI:31-207 1.0000 100 chrV:487212-487541 1.0000 100 chrVII:277817-278262 1.0000 100 chrIX:248674-249003 1.0000 100 chrI:166096-166550 1.0000 100 chrIV:840657-841047 1.0000 100 chrXIII:195968-196352 1.0000 100 chrIX:254258-254458 1.0000 100 chrIV:1201589-1201944 1.0000 100 chrIII:261751-262141 1.0000 100 chrXIII:808125-808481 1.0000 100 chrXIV:502101-502336 1.0000 100 chrIV:835820-836116 1.0000 100 chrII:625358-625757 1.0000 100 chrXI:108822-109008 1.0000 100 chrXII:650149-650539 1.0000 100 chrIV:750811-751303 1.0000 100 chrXII:535856-536246 1.0000 100 chrXIV:707818-708208 1.0000 100 chrV:467903-468210 1.0000 100 chrXIV:254517-254907 1.0000 100 chrXVI:645419-645551 1.0000 100 chrVII:700503-701213 1.0000 100 chrVIII:126478-126868 1.0000 100 chrXV:796921-797339 1.0000 100 chrIV:645058-645391 1.0000 100 chrVIII:233496-233886 1.0000 100 chrXIV:442832-443251 1.0000 100 chrVIII:122426-122554 1.0000 100 chrVII:930875-931175 1.0000 100 chrXII:794800-795268 1.0000 100 chrVIII:54390-54658 1.0000 100 chrVIII:396798-397051 1.0000 100 chrX:378210-378310 1.0000 100 chrVII:649029-649271 1.0000 100 chrXIII:163996-164094 1.0000 98 chrXIII:389030-389420 1.0000 100 chrV:358204-358594 1.0000 100 chrXV:444793-445935 1.0000 100 chrVII:544479-544825 1.0000 100 chrVII:479810-482725 1.0000 100 chrII:429359-429531 1.0000 100 chrXV:30-237 1.0000 100 chrXII:871714-872104 1.0000 100 chrII:613486-613682 1.0000 100 chrXIV:783894-784164 1.0000 100 chrIX:321854-322336 1.0000 100 chrXV:832314-832702 1.0000 100 chrIII:228697-229052 1.0000 100 chrXIII:23958-25782 1.0000 100 chrXII:369621-370308 1.0000 100 chrXII:348281-348671 1.0000 100 chrXIV:241506-241638 1.0000 100 chrIV:1270285-1270507 1.0000 100 chrVI:65061-65280 1.0000 100 chrIV:802622-802971 1.0000 100 chrX:531656-531756 1.0000 100 chrXV:282018-282312 1.0000 100 chrVII:557113-557503 1.0000 100 chrXV:798113-798267 1.0000 100 chrVI:64283-64673 1.0000 100 chrXII:368882-369613 1.0000 100 chrII:680331-680679 1.0000 100 chrXI:141860-142088 1.0000 100 chrXIII:760543-760770 1.0000 100 chrII:614545-614935 1.0000 100 chrXII:691218-691591 1.0000 100 chrXVI:819354-819696 1.0000 100 chrXIV:303128-303497 1.0000 100 chrVII:254189-254497 1.0000 100 chrXVI:173369-173590 1.0000 100 chrXVI:66986-67392 1.0000 100 chrVII:921261-921651 1.0000 100 chrII:197341-197874 1.0000 100 chrIX:98546-98936 1.0000 100 chrVII:185618-185914 1.0000 100 chrXVI:701285-701506 1.0000 100 chrXII:729666-729835 1.0000 100 chrXII:636835-639117 1.0000 100 chrXV:79839-80078 1.0000 100 chrIII:30401-30853 1.0000 100 chrX:453647-453747 1.0000 100 chrIV:237770-238160 1.0000 100 chrXI:326369-327505 1.0000 100 chrVII:311052-311949 1.0000 100 chrXVI:76395-76671 1.0000 100 chrIII:105189-105579 1.0000 100 chrXV:216307-216615 1.0000 100 chrII:477556-477946 1.0000 100 chrXI:334532-334909 1.0000 100 chrXIII:747803-748117 1.0000 100 chrXI:38688-39078 1.0000 100 chrXIV:722431-722821 1.0000 100 chrII:45994-46203 1.0000 100 chrV:295124-295514 1.0000 100 chrXIII:288844-289234 1.0000 100 chrXIV:88977-89697 1.0000 100 chrV:267836-268226 1.0000 100 chrIV:1402317-1402538 1.0000 100 chrXII:523087-523221 1.0000 100 chrXIV:63726-63947 1.0000 100 chrX:538407-538507 1.0000 100 chrVII:115343-115718 1.0000 100 chrIII:78780-79105 1.0000 100 chrXVI:95130-95452 1.0000 100 chrVII:555590-555980 1.0000 100 chrXVI:108862-109252 1.0000 100 chrX:195203-195303 1.0000 100 chrX:233773-233873 1.0000 100 chrII:394252-394642 1.0000 100 chrIV:884235-884583 1.0000 100 chrVIII:385677-385989 1.0000 100 chrXV:866624-866903 1.0000 100 chrVII:661588-661910 1.0000 100 chrVII:122114-122444 1.0000 100 chrXII:426978-427287 1.0000 100 chrIV:1308527-1308917 1.0000 100 chrVIII:98522-98912 1.0000 100 chrIX:269052-269442 1.0000 100 chrIV:555803-556272 1.0000 100 chrXIV:495258-495537 1.0000 100 chrXII:424239-424449 1.0000 100 chrVII:316872-317262 1.0000 100 chrIII:214400-214504 1.0000 100 chrXII:1064897-1065314 1.0000 100 chrVII:906042-906432 1.0000 100 chrVIII:234142-234532 1.0000 100 chrX:355212-355312 1.0000 100 chrXIV:374724-375070 1.0000 100 chrII:606674-606938 1.0000 100 chrXV:779765-780982 1.0000 100 chrII:405719-406119 1.0000 100 chrIV:331019-331293 1.0000 100 chrXIII:20762-21152 1.0000 100 chrIV:541525-541774 1.0000 100 chrXII:260051-260441 1.0000 100 chrVIII:382979-383264 1.0000 100 chrVII:794271-794575 1.0000 100 chrIII:138158-138787 1.0000 100 chrX:73447-73547 1.0000 100 chrXI:283393-283661 1.0000 100 chrXV:882170-882494 1.0000 100 chrIV:1301723-1302113 1.0000 100 chrXV:254317-254707 1.0000 100 chrVIII:505875-506136 1.0000 100 chrV:441849-442581 1.0000 100 chrXII:374193-374561 1.0000 100 chrXVI:821908-822220 1.0000 100 chrX:617751-617851 1.0000 100 chrXII:281968-282125 1.0000 100 chrXII:489285-489589 1.0000 100 chrII:377939-378161 1.0000 100 chrII:135942-136250 1.0000 100 chrXVI:829114-829415 1.0000 100 chrXII:656849-657164 1.0000 100 chrXII:710691-710819 1.0000 100 chrIII:138705-138992 1.0000 100 chrX:126441-126541 1.0000 100 chrXIII:861186-861408 1.0000 100 chrXV:730132-730522 1.0000 100 chrIV:1251720-1251957 1.0000 100 chrXII:898225-898615 1.0000 100 chrIX:210505-210828 1.0000 100 chrIV:915750-915862 1.0000 100 chrVIII:115014-115312 1.0000 100 chrX:663885-663985 1.0000 100 chrXI:82207-82597 1.0000 100 chrIII:82419-82666 1.0000 100 chrXIV:6567-6829 1.0000 100 chrXV:620513-620879 1.0000 100 chrXII:646015-646405 1.0000 100 chrII:332391-332678 1.0000 100 chrIX:27-193 1.0000 100 chrVIII:451288-452732 1.0000 100 chrXII:820051-820441 1.0000 100 chrXI:517309-517529 1.0000 100 chrIV:1269935-1270325 1.0000 100 chrXII:263585-263874 1.0000 100 chrVII:648208-648307 1.0000 99 chrXVI:303226-303670 1.0000 100 chrXI:84050-84360 1.0000 100 chrIII:177506-177826 1.0000 100 chrXIII:500144-500546 1.0000 100 chrVII:476077-476467 1.0000 100 chrXV:710042-710341 1.0000 100 chrV:407390-407780 1.0000 100 chrVII:878521-878973 1.0000 100 chrIV:465165-465420 1.0000 100 chrV:304366-304537 1.0000 100 chrVIII:302328-302737 1.0000 100 chrXIV:68383-68761 1.0000 100 chrV:462539-462929 1.0000 100 chrXIII:290658-290958 1.0000 100 chrX:622589-622689 1.0000 100 chrXVI:581879-582219 1.0000 100 chrIV:411332-411561 1.0000 100 chrVIII:94657-94957 1.0000 100 chrIV:1269021-1269411 1.0000 100 chrXII:709169-709559 1.0000 100 chrXIV:23569-23959 1.0000 100 chrXVI:880169-880522 1.0000 100 chrV:86402-86969 1.0000 100 chrVII:807208-807598 1.0000 100 chrVIII:55580-55705 1.0000 100 chrVI:225592-225982 1.0000 100 chrIV:155185-155575 1.0000 100 chrIV:308089-308295 1.0000 100 chrXII:921394-921784 1.0000 100 chrVII:877432-877614 1.0000 100 chrXVI:744129-744482 1.0000 100 chrVII:483220-483789 1.0000 100 chrXV:925209-925439 1.0000 100 chrVII:478165-478315 1.0000 100 chrXII:448546-448877 1.0000 100 chrXI:165148-165269 1.0000 100 chrXV:438508-438865 1.0000 100 chrVII:328429-328818 1.0000 100 chrX:521059-521159 1.0000 100 chrXVI:769074-769483 1.0000 100 chrXVI:124951-125341 1.0000 100 chrIV:914957-915118 1.0000 100 chrXIII:774370-774529 1.0000 100 chrXIII:334857-335262 1.0000 100 chrIV:721810-722137 1.0000 100 chrXII:827148-827263 1.0000 100 chrVII:148452-148842 1.0000 100 chrVI:223424-223636 1.0000 100 chrVII:405321-405697 1.0000 100 chrVII:882519-883881 1.0000 100 chrIII:142633-142925 1.0000 100 chrXVI:580387-580777 1.0000 100 chrXII:784200-784567 1.0000 100 chrV:78884-79512 1.0000 100 chrXII:283079-283669 1.0000 100 chrXV:964474-964864 1.0000 100 chrVI:225131-225375 1.0000 100 chrVII:609746-610048 1.0000 100 chrXIII:162392-162739 1.0000 100 chrII:36243-36551 1.0000 100 chrVIII:85226-85534 1.0000 100 chrIV:768576-768760 1.0000 100 chrIV:117231-117493 1.0000 100 chrXII:645803-646193 1.0000 100 chrXVI:248332-248722 1.0000 100 chrX:119268-119368 1.0000 100 chrXIV:501532-501709 1.0000 100 chrXVI:377687-378077 1.0000 100 chrXIII:259059-259392 1.0000 100 chrV:267627-268017 1.0000 100 chrXII:370380-371005 1.0000 100 chrXII:28-193 1.0000 100 chrXIII:224050-224440 1.0000 100 chrXIII:626109-626499 1.0000 100 chrVII:640931-641268 1.0000 100 chrIX:97300-97533 1.0000 100 chrVII:345471-345789 1.0000 100 chrXII:712413-712803 1.0000 100 chrX:119894-119994 1.0000 100 chrII:374202-374301 1.0000 99 chrVII:534853-535160 1.0000 100 chrXVI:689414-689808 1.0000 100 chrIV:722424-722814 1.0000 100 chrXIII:5325-5770 1.0000 100 chrXVI:701848-702083 1.0000 100 chrXVI:194071-194371 1.0000 100 chrXII:515712-515880 1.0000 100 chrIV:1489967-1490449 1.0000 100 chrX:541354-541454 1.0000 100 chrXV:274493-274894 1.0000 100 chrXVI:210093-210403 1.0000 100 chrXII:789788-790072 1.0000 100 chrVIII:381682-381967 1.0000 100 chrII:226932-227308 1.0000 100 chrXIII:754476-754677 1.0000 100 chrXVI:810499-810830 1.0000 100 chrXIV:443600-443990 1.0000 100 chrXII:806281-806715 1.0000 100 chrXVI:55912-56447 1.0000 100 chrX:139264-139364 1.0000 100 chrXII:639425-639906 1.0000 100 chrIV:44144-44534 1.0000 100 chrXVI:856730-857071 1.0000 100 chrVII:727766-728156 1.0000 100 chrIV:466122-466512 1.0000 100 chrXIV:716137-716400 1.0000 100 chrVI:157813-158157 1.0000 100 chrXII:796484-796779 1.0000 100 chrXII:605169-605593 1.0000 100 chrVIII:562321-562607 1.0000 100 chrXIV:675764-676112 1.0000 100 chrXI:571207-571413 1.0000 100 chrVII:784243-784341 1.0000 98 chrVII:1050197-1050474 1.0000 100 chrV:424717-425107 1.0000 100 chrIX:45828-46257 1.0000 100 chrIV:1017100-1017442 1.0000 100 chrVII:738979-739298 1.0000 100 chrXII:280682-281072 1.0000 100 chrV:362805-363195 1.0000 100 chrXV:464280-464640 1.0000 100 chrVIII:35206-35786 1.0000 100 chrI:180979-181380 1.0000 100 chrIII:209924-210314 1.0000 100 chrXI:109365-109755 1.0000 100 chrX:414821-414921 1.0000 100 chrXII:628225-628609 1.0000 100 chrVIII:34566-35184 1.0000 100 chrXIII:552942-553237 1.0000 100 chrXIV:102555-102858 1.0000 100 chrIII:62853-63243 1.0000 100 chrXV:92277-92387 1.0000 100 chrIV:217129-217519 1.0000 100 chrXII:372545-372935 1.0000 100 chrIII:262659-263049 1.0000 100 chrXV:218882-219067 1.0000 100 chrV:68929-69477 1.0000 100 chrXV:487294-487632 1.0000 100 chrXII:1019047-1019305 1.0000 100 chrIV:340507-340897 1.0000 100 chrXIV:351918-352418 1.0000 100 chrIII:163451-163840 1.0000 100 chrX:90119-90219 1.0000 100 chrV:135258-135669 1.0000 100 chrXIII:777297-777619 1.0000 100 chrV:61269-61463 1.0000 100 chrXII:592411-592771 1.0000 100 chrXVI:900038-900428 1.0000 100 chrVIII:105004-105394 1.0000 100 chrXII:824622-825012 1.0000 100 chrII:88154-88486 1.0000 100 chrV:302850-303240 1.0000 100 chrIV:52-284 1.0000 100 chrVIII:475571-475912 1.0000 100 chrVII:516288-516617 1.0000 100 chrXV:1073043-1073496 1.0000 100 chrVIII:146115-146486 1.0000 100 chrV:67150-67540 1.0000 100 chrXIII:279974-280106 1.0000 100 chrXI:99799-99955 1.0000 100 chrXII:5452-5852 1.0000 100 chrVII:857282-857639 1.0000 100 chrXV:883086-883476 1.0000 100 chrXVI:193004-193567 1.0000 100 chrXIII:768272-768604 1.0000 100 chrXIV:230511-230636 1.0000 100 chrIX:300133-300451 1.0000 100 chrX:703314-703414 1.0000 100 chrX:181855-181955 1.0000 100 chrXIII:168641-169019 1.0000 100 chrXIV:349003-349393 1.0000 100 chrXV:978772-979130 1.0000 100 chrXI:143881-144271 1.0000 100 chrXV:93653-94043 1.0000 100 chrV:176939-177367 1.0000 100 chrVIII:388794-389156 1.0000 100 chrX:227846-227946 1.0000 100 chrIV:392532-392922 1.0000 100 chrXIII:220808-221197 1.0000 100 chrXII:713214-713515 1.0000 100 chrIV:1466961-1467351 1.0000 100 chrVI:162084-162377 1.0000 100 chrV:443115-443440 1.0000 100 chrIV:130078-130258 1.0000 100 chrX:390950-391050 1.0000 100 chrIV:306686-306844 1.0000 100 chrXIII:732095-732322 1.0000 100 chrIX:127671-128113 1.0000 100 chrVII:786157-786547 1.0000 100 chrXI:382915-383305 1.0000 100 chrI:139001-139319 1.0000 100 chrXI:74465-74782 1.0000 100 chrXV:623982-624221 1.0000 100 chrV:491108-491495 1.0000 100 chrII:45037-45353 1.0000 100 chrXV:897315-897705 1.0000 100 chrIV:234437-234827 1.0000 100 chrXI:567155-567476 1.0000 100 chrV:85137-85431 1.0000 100 chrV:130992-131311 1.0000 100 chrX:374349-374449 1.0000 100 chrVIII:466812-467137 1.0000 100 chrXV:962178-962568 1.0000 100 chrVII:799349-799739 1.0000 100 chrXIII:223118-223508 1.0000 100 chrXIII:297442-298839 1.0000 100 chrX:123361-123461 1.0000 100 chrIX:174860-175240 1.0000 100 chrVIII:62594-62918 1.0000 100 chrV:69853-70243 1.0000 100 chrXII:547135-547525 1.0000 100 chrIII:168206-168550 1.0000 100 chrXV:980540-980887 1.0000 100 chrIV:1401336-1401521 1.0000 100 chrXVI:280619-281324 1.0000 100 chrVII:856803-856914 1.0000 100 chrV:139299-139424 1.0000 100 chrVII:441301-441518 1.0000 100 chrXIII:551408-551750 1.0000 100 chrXIV:253847-254237 1.0000 100 chrVIII:386132-386526 1.0000 100 chrX:95594-95694 1.0000 100 chrX:73824-73924 1.0000 100 chrXIII:123715-124105 1.0000 100 chrX:523923-524023 1.0000 100 chrXV:168046-168355 1.0000 100 chrIV:842001-842401 1.0000 100 chrXII:837814-839294 1.0000 100 chrXI:490818-491117 1.0000 100 chrVII:371153-371543 1.0000 100 chrXII:11061-11487 1.0000 100 chrI:71936-73318 1.0000 100 chrII:311513-311900 1.0000 100 chrXII:951355-951612 1.0000 100 chrXI:114762-115175 1.0000 100 chrXIV:234277-234667 1.0000 100 chrII:89001-89391 1.0000 100 chrXII:348486-348876 1.0000 100 chrXII:202231-202507 1.0000 100 chrXV:110826-111201 1.0000 100 chrXII:232179-234101 1.0000 100 chrXVI:132684-133074 1.0000 100 chrVII:851153-851543 1.0000 100 chrXV:962386-962776 1.0000 100 chrXIV:24627-25017 1.0000 100 chrXIII:504721-505111 1.0000 100 chrXII:834579-834969 1.0000 100 chrX:415853-415953 1.0000 100 chrXIII:667711-668101 1.0000 100 chrVII:850574-850785 1.0000 100 chrVIII:237759-238086 1.0000 100 chrXIII:652277-652840 1.0000 100 chrIX:214204-214594 1.0000 100 chrXII:241709-241936 1.0000 100 chrVII:667785-668103 1.0000 100 chrX:391749-391849 1.0000 100 chrV:354763-355179 1.0000 100 chrV:423141-423428 1.0000 100 chrXIV:62123-62259 1.0000 100 chrVIII:115965-116335 1.0000 100 chrVI:75553-75943 1.0000 100 chrIV:359419-359799 1.0000 100 chrXI:258622-258958 1.0000 100 chrIII:227796-228199 1.0000 100 chrXII:97197-97587 1.0000 100 chrX:293040-293140 1.0000 100 chrV:334926-335316 1.0000 100 chrXII:809274-809624 1.0000 100 chrXIV:663723-664079 1.0000 100 chrXII:1029262-1029652 1.0000 100 chrVII:876250-876565 1.0000 100 chrXV:903800-904300 1.0000 100 chrXII:515830-516220 1.0000 100 chrVII:561529-561908 1.0000 100 chrVII:422930-423379 1.0000 100 chrV:431044-431533 1.0000 100 chrXI:520087-520583 1.0000 100 chrVII:436882-437382 1.0000 100 chrXVI:73342-73732 1.0000 100 chrXIII:352108-352502 1.0000 100 chrVIII:132950-133278 1.0000 100 chrXII:794230-794724 1.0000 100 chrVIII:556697-557246 1.0000 100 chrVIII:382109-382316 1.0000 100 chrXV:113666-113933 1.0000 100 chrIV:1305475-1305815 1.0000 100 chrXVI:17413-17800 1.0000 100 chrVIII:51248-51638 1.0000 100 chrV:140536-140836 1.0000 100 chrXII:837580-837881 1.0000 100 chrIV:1418655-1419045 1.0000 100 chrXII:728215-728395 1.0000 100 chrXIV:602173-602497 1.0000 100 chrXII:952874-953061 1.0000 100 chrIV:946129-946559 1.0000 100 chrVII:364166-364556 1.0000 100 chrV:438553-438849 1.0000 100 chrXIV:560576-560943 1.0000 100 chrII:615358-615748 1.0000 100 chrIX:232611-233024 1.0000 100 chrXIII:484296-484686 1.0000 100 chrXII:919587-919977 1.0000 100 chrXVI:405084-405567 1.0000 100 chrVI:191413-191765 1.0000 100 chrXV:724113-724351 1.0000 100 chrVII:779473-779813 1.0000 100 chrIII:30-494 1.0000 100 chrXIV:490687-491077 1.0000 100 chrVII:183536-183926 1.0000 100 chrV:207204-207529 1.0000 100 chrXVI:645825-646215 1.0000 100 chrVII:806448-806683 1.0000 100 chrVI:221821-222000 1.0000 100 chrXV:160254-160588 1.0000 100 chrIII:123458-123801 1.0000 100 chrXIV:499705-500779 1.0000 100 chrXVI:435801-436139 1.0000 100 chrVII:366172-366578 1.0000 100 chrXIII:67693-67871 1.0000 100 chrXV:594260-594585 1.0000 100 chrIV:356262-356720 1.0000 100 chrVII:319619-320019 1.0000 100 chrXII:341295-341453 1.0000 100 chrXV:967178-967568 1.0000 100 chrXIV:87316-87767 1.0000 100 chrV:469310-469606 1.0000 100 chrIX:99701-99934 1.0000 100 chrXI:514256-514403 1.0000 100 chrVII:736163-736530 1.0000 100 chrIV:1465907-1466195 1.0000 100 chrIX:324207-324533 1.0000 100 chrIV:1256934-1257236 1.0000 100 chrXV:92984-93295 1.0000 100 chrVII:788379-788672 1.0000 100 chrXIV:569793-570086 1.0000 100 chrIV:1239495-1239645 1.0000 100 chrVIII:81054-81444 1.0000 100 chrIV:198752-199142 1.0000 100 chrIII:212968-213358 1.0000 100 chrVI:55523-55913 1.0000 100 chrVIII:488371-488530 1.0000 100 chrXII:540887-541277 1.0000 100 chrXII:366079-366435 1.0000 100 chrXVI:281235-281523 1.0000 100 chrVIII:381939-382111 1.0000 100 chrI:109019-109409 1.0000 100 chrXII:954269-954571 1.0000 100 chrII:266227-266567 1.0000 100 chrIII:223660-224050 1.0000 100 chrXIII:379195-379571 1.0000 100 chrIII:261951-262341 1.0000 100 chrXIV:722205-722595 1.0000 100 chrVII:531475-531752 1.0000 100 chrXIV:506308-506698 1.0000 100 chrXII:201901-202263 1.0000 100 chrXII:522684-523074 1.0000 100 chrVI:90617-90989 1.0000 100 chrII:428417-428541 1.0000 100 chrVII:555408-555625 1.0000 100 chrXV:479616-480006 1.0000 100 chrX:598300-598400 1.0000 100 chrXII:242872-243262 1.0000 100 chrX:652104-652204 1.0000 100 chrVII:110510-110858 1.0000 100 chrXI:308057-308385 1.0000 100 chrXVI:106265-106655 1.0000 100 chrXI:46229-46960 1.0000 100 chrXII:95547-95937 1.0000 100 chrVII:120931-121235 1.0000 100 chrIV:1360329-1360719 1.0000 100 chrV:434405-434784 1.0000 100 chrV:288352-288669 1.0000 100 chrIV:1352387-1352676 1.0000 100 chrVII:440573-440985 1.0000 100 chrIV:44454-44606 1.0000 100 chrIV:386930-387192 1.0000 100 chrXVI:338769-339066 1.0000 100 chrXIV:63166-63469 1.0000 100 chrXIII:271483-271796 1.0000 100 chrVII:454471-454882 1.0000 100 chrXIII:159041-159393 1.0000 100 chrVIII:504838-505135 1.0000 100 chrXI:382283-382451 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 571 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 57094 N= 571 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.280 C 0.220 G 0.220 T 0.280 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--MCM1/background): A 0.296 C 0.204 G 0.204 T 0.296 ******************************************************************************** ******************************************************************************** MOTIF CSCHYWAMCMACTSGGCCAH MEME-1 width = 20 sites = 102 llr = 1485 E-value = 2.8e-244 ******************************************************************************** -------------------------------------------------------------------------------- Motif CSCHYWAMCMACTSGGCCAH MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::12:575:39:21211:94 pos.-specific C 75933:25a5:9:42298:3 probability G 35:2::2::21::367:::: matrix T :::365:::::182:::212 bits 2.3 * 2.1 * 1.8 * 1.6 * * * ** Relative 1.4 * * ** ** Entropy 1.1 *** * *** **** (21.0 bits) 0.9 *** ** *** ***** 0.7 *** ***** *** ***** 0.5 *** ********* ****** 0.2 *** **************** 0.0 -------------------- Multilevel CCCCTTACCCACTCGGCCAA consensus GG TCA A A GCC C sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CSCHYWAMCMACTSGGCCAH MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------- chrVI:191413-191765 + 49 1.05e-11 AGCAGGGCAT CGCCTTAACCACTCGGCCAC TGGGACAGAA chrXV:274493-274894 - 36 1.05e-11 AGCAGGGCAT CGCCTTAACCACTCGGCCAC TGGGACACGA chrXII:784200-784567 - 27 1.05e-11 TAGCAGGCAT CGCCTTAACCACTCGGCCAC TGGGACGGTT chrIV:1305475-1305815 - 41 1.52e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAA GTTGCCTTAA chrVIII:132950-133278 + 18 1.52e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAA GTTGCCACTT chrVII:561529-561908 + 50 1.52e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAA GTTGCCAATG chrX:523923-524023 + 22 1.52e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAA GTTGCCTTTA chrII:226932-227308 - 11 1.52e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAA GTTGCCTCGT chrXIII:259059-259392 + 39 1.52e-11 TCTAATCTTT CGCCTTAACCACTCGGCCAA GTTGCCATAC chrV:288352-288669 + 39 8.80e-11 TCAAGTCTGT CGCCTTAACCACTCGGCCAT AGTGCCTATC chrIII:227796-228199 - 1 8.80e-11 TCGAGTCTCT CGCCTTAACCACTCGGCCAT chrXVI:689414-689808 - 10 8.80e-11 TCAAGTCTGT CGCCTTAACCACTCGGCCAT AGTGCCCAA chrIX:248674-249003 - 68 8.80e-11 TCAAGTCTGT CGCCTTAACCACTCGGCCAT AGTGCCTAAA chrXII:592411-592771 + 53 3.33e-10 TAAATCTGAC GCCTTAAACCACTCGGCCAA ACTCCCATTG chrX:617751-617851 - 37 3.33e-10 TAAATCTGAC GCCTTAAACCACTCGGCCAA ACTCCCATTG chrXIV:569793-570086 + 26 5.90e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAA GAGACCACTG chrXIV:602173-602497 - 33 5.90e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAA GAGACCATTG chrV:443115-443440 + 23 5.90e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAA GAGACCAAAT chrVII:738979-739298 - 40 5.90e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAA GAGACCTATT chrXVI:880169-880522 + 49 5.90e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAA GAGACCATTA chrIX:210505-210828 - 55 5.90e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAA GAGACCAGAT chrXVI:819354-819696 - 60 5.90e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAA GAGACCATTC chrII:266227-266567 - 37 1.42e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCAT AGAAGCAGTT chrXIV:560576-560943 + 31 1.42e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCAT AGAAGCCCGT chrXV:113666-113933 - 59 1.42e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCAT AGAAGCTAAA chrVIII:115965-116335 + 54 1.42e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCAT AGAAGCTCTA chrIX:174860-175240 - 37 1.42e-09 ACTAGTGTGG CGCCTTACCAACTTGGCCAT AGAAGCTCGT chrXI:84050-84360 - 59 1.68e-09 TAAGTCTGCC GCCTTAGACCACTCGGCCAA CCCTCCATAC chrVII:794271-794575 - 50 5.63e-09 GCAAGGGAAG CGCGCTACCAACTGCGCCAT GTGCCCGCAA chrXI:74465-74782 - 57 8.49e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCAT GGAGTCTAAT chrXV:487294-487632 - 32 8.49e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCAT GGAGTCTAAC chrXIV:102555-102858 - 66 8.49e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCAT GGAGTCTTAT chrXVI:810499-810830 - 68 8.49e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCAT GGAGTCGCAA chrXIII:768272-768604 + 28 1.43e-08 GCTAAGGGAG CGCGCTACCGACTACGCCAC ACGCCCATTT chrVIII:146115-146486 + 39 1.43e-08 GCTAAGGGAG CGCGCTACCGACTACGCCAC ACGCCCTGAT chrXVI:856730-857071 - 58 1.43e-08 GCTAAGGGAG CGCGCTACCGACTACGCCAC ACGCCCGAAT chrXII:656849-657164 + 25 1.43e-08 GCTAAGGGAG CGCGCTACCGACTACGCCAC ACGCCCAATT chrXIII:504721-505111 - 35 2.97e-08 TGAATCAGGC GCCTTAGACCGCTCGGCCAA ACAACCACTT chrVII:857282-857639 + 56 2.97e-08 TGAATCAGGC GCCTTAGACCGCTCGGCCAA ACAACCACTT chrXII:628225-628609 - 22 2.97e-08 TGAATCAGGC GCCTTAGACCGCTCGGCCAA ACAACCACTT chrI:180979-181380 - 18 2.97e-08 TGAATCAGGC GCCTTAGACCGCTCGGCCAA ACAACCACTT chrXIV:442832-443251 - 21 2.97e-08 TGAATCAGGC GCCTTAGACCGCTCGGCCAA ACAACCACTT chrIV:359419-359799 - 24 3.34e-08 AAAAGCCGAA CGCTCTACCAACTGAGCTAA CAAGGATGAG chrXVI:769074-769483 + 49 3.34e-08 AAAAGCCGAA CGCTCTACCAACTGAGCTAA CAAGGATGAG chrXV:438508-438865 - 13 3.34e-08 AAAAGCCGAA CGCTCTACCAACTGAGCTAA CAAGGATGAG chrVII:115343-115718 - 14 3.34e-08 AAAAGCCGAA CGCTCTACCAACTGAGCTAA CAAGGATGAG chrIV:1352387-1352676 + 32 3.74e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAA CAAGGCTATT chrVII:876250-876565 - 43 3.74e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAA CAAGGCTATT chrIX:300133-300451 + 33 3.74e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAA CAAGGCTATT chrV:135258-135669 + 59 3.74e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAA CAAGGCTTTT chrX:414821-414921 - 41 3.74e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAA CAAGGCTAAT chrXVI:581879-582219 - 69 3.74e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAA CAAGGCTCTT chrVII:122114-122444 - 46 3.74e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAA CAAGGCTAAT chrVII:185618-185914 + 45 3.74e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAA CAAGGCTATT chrIV:1201589-1201944 - 40 3.74e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAA CAAGGCTATT chrXI:490818-491117 - 57 8.05e-08 CGTAGCCAGA CGCCGTGACCATTGGGCCAC GAGGAACAAG chrXII:374193-374561 - 34 8.05e-08 CGTAGCCAGA CGCCGTGACCATTGGGCCAC GAGGAACAAG chrX:233773-233873 - 64 8.05e-08 CGTAGCCAGA CGCCGTGACCATTGGGCCAC GAGGAACAAG chrVII:440573-440985 + 53 9.91e-08 TTCAGTCTGG CGCTCTCCCAACTGAGCTAA ATCCGCATAT chrXIII:352108-352502 - 31 9.91e-08 TTCAGTCTGG CGCTCTCCCAACTGAGCTAA ATCCGCTTAT chrVIII:237759-238086 + 42 9.91e-08 TTCAGTCTGG CGCTCTCCCAACTGAGCTAA ATCCGCTTAC chrVI:157813-158157 + 47 9.91e-08 TTCAGTCTGG CGCTCTCCCAACTGAGCTAA ATCCGCTTCT chrII:36243-36551 - 57 9.91e-08 TTCAGTCTGG CGCTCTCCCAACTGAGCTAA ATCCGCTTAC chrXIV:374724-375070 - 28 9.91e-08 TTCAGTCTGG CGCTCTCCCAACTGAGCTAA GTCCGCTTAT chrXI:308057-308385 + 21 2.17e-07 TTAAGCAGAT GCCATAACCGACTAGACCAC GAAACCACTT chrV:469310-469606 - 55 2.17e-07 TTAAGCAGAT GCCATAACCGACTAGACCAC GAAACCAATT chrV:438553-438849 - 55 2.17e-07 TTAAGCAGAT GCCATAACCGACTAGACCAC GAAACCTAAT chrXV:980540-980887 - 18 2.17e-07 GAGAATCATT CCACTAGACCACACGCCCAT ACAATTTGTG chrVIII:388794-389156 + 53 2.17e-07 GAGAATCATA CCACTAGACCACACGCCCAT GTATCTGTTG chrVIII:85226-85534 + 16 2.17e-07 TTAAGCAGAT GCCATAACCGACTAGACCAC GAAACCAAAT chrX:378210-378310 - 51 2.17e-07 TTAAGCAGAT GCCATAACCGACTAGACCAC GAAACCTATT chrXIII:372335-372657 + 47 2.17e-07 TTAAGCAGAT GCCATAACCGACTAGACCAC GAAACCAGGT chrXII:605169-605593 + 76 6.26e-07 ATAAGCACGA AGCTCTAACCACTGAGCTAC ACGAG chrIV:884235-884583 - 8 6.26e-07 ATAAGCACGA AGCTCTAACCACTGAGCTAC ACGAGCA chrIII:30-494 + 14 9.39e-07 CACACCCACA CCCACACCCCACACCCACAC ACCACACCCA chrXIV:567950-568334 - 21 1.10e-06 GAGAATCATA CCACTAGACCACACGCCCGA TTATTTTATG chrXII:11061-11487 + 48 1.38e-06 ACACACCACA CCCACACACCACACCCACAC CCACACCACA chrXII:5452-5852 + 67 1.38e-06 ATACACCACA CCCACACACCACACCCACAC CACACCCACA chrIV:52-284 + 3 1.38e-06 CA CCCACACACCACACCCACAC CCACACACCA chrXV:464280-464640 - 38 1.38e-06 GAGAATCATA CCACTAGACCACACGCCCTT GTTAACTTGT chrVIII:562321-562607 - 42 1.38e-06 CACACCCACA CCCACACACCACACCCACAC TTTTCACATC chrXIII:5325-5770 + 49 1.38e-06 TACACCCACA CCCACACACCACACCCACAC CCACACACCA chrXIII:195968-196352 + 43 1.38e-06 GAGAATCATA CCACTAGACCACACGCCCTT GTGAACTTGT chrI:139001-139319 - 40 1.72e-06 GAGAATCATA CCACTAGACCACACGCCCGT ACTAATTGAT chrI:109019-109409 - 68 1.99e-06 TTACGGAAGA GTCATTGCCGACTGGCCCAT GTTCCGTGAC chrXII:1064897-1065314 - 28 1.99e-06 ACCCACCACA CCCACACACCACACACACAC ACACCACACC chrIII:123458-123801 + 52 2.14e-06 GAGAATCATA CCTCTAGACCACACGCCCTC CTTTGAAAAA chrX:531656-531756 - 27 2.63e-06 TTGGATTTTA CCACTAAACCACTTGCGCTC ACTAATTGTT chrIII:142633-142925 + 25 2.82e-06 TTGGATTTTA CCACTAAACCACTTGCGCTA GTAATCTTGA chrV:68929-69477 - 17 3.02e-06 CGAGCATGCA CCCGTACCCCACAAAGCTTC GCTTCCGGTT chrXV:282018-282312 - 47 3.23e-06 TTGGATTTTA CCACTAAACCACTTGCGCGC TTTCATGTTA chrIV:1251720-1251957 + 50 3.45e-06 AGGGAAGGAG CGCGTTCCCAATAGGGCTGC CACCTTCCCA chrVII:786157-786547 + 17 4.20e-06 TATGCCATAC GCAATTAGCAATTCGGCCAA CAACGTGCTG chrVI:162084-162377 - 46 4.20e-06 TTGGATTTTA CCACTAAACCACTTGCGCTT GTTTTCTTGT chrVII:930875-931175 + 31 4.20e-06 TTGGATTTTA CCACTAAACCACTTGCGCTT ACTGATTATA chrXIV:783894-784164 - 63 4.48e-06 CACCCACACA CCCACACACACCACACCCAC ACACTACCCT chrIV:946129-946559 - 24 4.77e-06 CAGTCTTGCG CCTTAAACCAACTTGGCTAC CGAGAGTCGA chrXIII:168641-169019 - 21 4.77e-06 CAGTCTTGCG CCTTAAACCAACTTGGCTAC CGAGAGTGAC chrXVI:829114-829415 + 59 5.08e-06 ACGGACGGGG CCCCGAAACACCACCCCCAT TTTAACGGCC chrXIII:296842-297064 + 51 6.49e-06 AACGTATCTT AGCATTACCCGCACACCCAT ACATCTAGAA chrX:390950-391050 + 22 9.77e-06 ATGAGACTGA CGCTCTTCCTACTGAGCTAC TGAAGCACTA chrXV:160254-160588 - 40 1.22e-05 ACGGTGACTG GCCATTGCCAGTTAAGCTAC CATTAGTCGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CSCHYWAMCMACTSGGCCAH MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrVI:191413-191765 1.1e-11 48_[+1]_32 chrXV:274493-274894 1.1e-11 35_[-1]_45 chrXII:784200-784567 1.1e-11 26_[-1]_54 chrIV:1305475-1305815 1.5e-11 40_[-1]_40 chrVIII:132950-133278 1.5e-11 17_[+1]_63 chrVII:561529-561908 1.5e-11 49_[+1]_31 chrX:523923-524023 1.5e-11 21_[+1]_59 chrII:226932-227308 1.5e-11 10_[-1]_70 chrXIII:259059-259392 1.5e-11 38_[+1]_42 chrV:288352-288669 8.8e-11 38_[+1]_42 chrIII:227796-228199 8.8e-11 [-1]_80 chrXVI:689414-689808 8.8e-11 9_[-1]_71 chrIX:248674-249003 8.8e-11 67_[-1]_13 chrXII:592411-592771 3.3e-10 52_[+1]_28 chrX:617751-617851 3.3e-10 36_[-1]_44 chrXIV:569793-570086 5.9e-10 25_[+1]_55 chrXIV:602173-602497 5.9e-10 32_[-1]_48 chrV:443115-443440 5.9e-10 22_[+1]_58 chrVII:738979-739298 5.9e-10 39_[-1]_41 chrXVI:880169-880522 5.9e-10 48_[+1]_32 chrIX:210505-210828 5.9e-10 54_[-1]_26 chrXVI:819354-819696 5.9e-10 59_[-1]_21 chrII:266227-266567 1.4e-09 36_[-1]_44 chrXIV:560576-560943 1.4e-09 30_[+1]_50 chrXV:113666-113933 1.4e-09 58_[-1]_22 chrVIII:115965-116335 1.4e-09 53_[+1]_27 chrIX:174860-175240 1.4e-09 36_[-1]_44 chrXI:84050-84360 1.7e-09 58_[-1]_22 chrVII:794271-794575 5.6e-09 49_[-1]_31 chrXI:74465-74782 8.5e-09 56_[-1]_24 chrXV:487294-487632 8.5e-09 31_[-1]_49 chrXIV:102555-102858 8.5e-09 65_[-1]_15 chrXVI:810499-810830 8.5e-09 67_[-1]_13 chrXIII:768272-768604 1.4e-08 27_[+1]_53 chrVIII:146115-146486 1.4e-08 38_[+1]_42 chrXVI:856730-857071 1.4e-08 57_[-1]_23 chrXII:656849-657164 1.4e-08 24_[+1]_56 chrXIII:504721-505111 3e-08 34_[-1]_46 chrVII:857282-857639 3e-08 55_[+1]_25 chrXII:628225-628609 3e-08 21_[-1]_59 chrI:180979-181380 3e-08 17_[-1]_63 chrXIV:442832-443251 3e-08 20_[-1]_60 chrIV:359419-359799 3.3e-08 23_[-1]_57 chrXVI:769074-769483 3.3e-08 48_[+1]_32 chrXV:438508-438865 3.3e-08 12_[-1]_68 chrVII:115343-115718 3.3e-08 13_[-1]_67 chrIV:1352387-1352676 3.7e-08 31_[+1]_49 chrVII:876250-876565 3.7e-08 42_[-1]_38 chrIX:300133-300451 3.7e-08 32_[+1]_48 chrV:135258-135669 3.7e-08 58_[+1]_22 chrX:414821-414921 3.7e-08 40_[-1]_40 chrXVI:581879-582219 3.7e-08 68_[-1]_12 chrVII:122114-122444 3.7e-08 45_[-1]_35 chrVII:185618-185914 3.7e-08 44_[+1]_36 chrIV:1201589-1201944 3.7e-08 39_[-1]_41 chrXI:490818-491117 8.1e-08 56_[-1]_24 chrXII:374193-374561 8.1e-08 33_[-1]_47 chrX:233773-233873 8.1e-08 63_[-1]_17 chrVII:440573-440985 9.9e-08 52_[+1]_28 chrXIII:352108-352502 9.9e-08 30_[-1]_50 chrVIII:237759-238086 9.9e-08 41_[+1]_39 chrVI:157813-158157 9.9e-08 46_[+1]_34 chrII:36243-36551 9.9e-08 56_[-1]_24 chrXIV:374724-375070 9.9e-08 27_[-1]_53 chrXI:308057-308385 2.2e-07 20_[+1]_60 chrV:469310-469606 2.2e-07 54_[-1]_26 chrV:438553-438849 2.2e-07 54_[-1]_26 chrXV:980540-980887 2.2e-07 17_[-1]_63 chrVIII:388794-389156 2.2e-07 52_[+1]_28 chrVIII:85226-85534 2.2e-07 15_[+1]_65 chrX:378210-378310 2.2e-07 50_[-1]_30 chrXIII:372335-372657 2.2e-07 46_[+1]_34 chrXII:605169-605593 6.3e-07 75_[+1]_5 chrIV:884235-884583 6.3e-07 7_[-1]_73 chrIII:30-494 9.4e-07 13_[+1]_67 chrXIV:567950-568334 1.1e-06 20_[-1]_60 chrXII:11061-11487 1.4e-06 47_[+1]_33 chrXII:5452-5852 1.4e-06 66_[+1]_14 chrIV:52-284 1.4e-06 2_[+1]_78 chrXV:464280-464640 1.4e-06 37_[-1]_43 chrVIII:562321-562607 1.4e-06 41_[-1]_39 chrXIII:5325-5770 1.4e-06 48_[+1]_32 chrXIII:195968-196352 1.4e-06 42_[+1]_38 chrI:139001-139319 1.7e-06 39_[-1]_41 chrI:109019-109409 2e-06 67_[-1]_13 chrXII:1064897-1065314 2e-06 27_[-1]_53 chrIII:123458-123801 2.1e-06 51_[+1]_29 chrX:531656-531756 2.6e-06 26_[-1]_54 chrIII:142633-142925 2.8e-06 24_[+1]_56 chrV:68929-69477 3e-06 16_[-1]_64 chrXV:282018-282312 3.2e-06 46_[-1]_34 chrIV:1251720-1251957 3.5e-06 49_[+1]_31 chrVII:786157-786547 4.2e-06 16_[+1]_64 chrVI:162084-162377 4.2e-06 45_[-1]_35 chrVII:930875-931175 4.2e-06 30_[+1]_50 chrXIV:783894-784164 4.5e-06 62_[-1]_18 chrIV:946129-946559 4.8e-06 23_[-1]_57 chrXIII:168641-169019 4.8e-06 20_[-1]_60 chrXVI:829114-829415 5.1e-06 58_[+1]_22 chrXIII:296842-297064 6.5e-06 50_[+1]_30 chrX:390950-391050 9.8e-06 21_[+1]_59 chrXV:160254-160588 1.2e-05 39_[-1]_41 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CSCHYWAMCMACTSGGCCAH MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CSCHYWAMCMACTSGGCCAH width=20 seqs=102 chrVI:191413-191765 ( 49) CGCCTTAACCACTCGGCCAC 1 chrXV:274493-274894 ( 36) CGCCTTAACCACTCGGCCAC 1 chrXII:784200-784567 ( 27) CGCCTTAACCACTCGGCCAC 1 chrIV:1305475-1305815 ( 41) CGCCTTAACCACTCGGCCAA 1 chrVIII:132950-133278 ( 18) CGCCTTAACCACTCGGCCAA 1 chrVII:561529-561908 ( 50) CGCCTTAACCACTCGGCCAA 1 chrX:523923-524023 ( 22) CGCCTTAACCACTCGGCCAA 1 chrII:226932-227308 ( 11) CGCCTTAACCACTCGGCCAA 1 chrXIII:259059-259392 ( 39) CGCCTTAACCACTCGGCCAA 1 chrV:288352-288669 ( 39) CGCCTTAACCACTCGGCCAT 1 chrIII:227796-228199 ( 1) CGCCTTAACCACTCGGCCAT 1 chrXVI:689414-689808 ( 10) CGCCTTAACCACTCGGCCAT 1 chrIX:248674-249003 ( 68) CGCCTTAACCACTCGGCCAT 1 chrXII:592411-592771 ( 53) GCCTTAAACCACTCGGCCAA 1 chrX:617751-617851 ( 37) GCCTTAAACCACTCGGCCAA 1 chrXIV:569793-570086 ( 26) GCCTTAACCAACTGGGCCAA 1 chrXIV:602173-602497 ( 33) GCCTTAACCAACTGGGCCAA 1 chrV:443115-443440 ( 23) GCCTTAACCAACTGGGCCAA 1 chrVII:738979-739298 ( 40) GCCTTAACCAACTGGGCCAA 1 chrXVI:880169-880522 ( 49) GCCTTAACCAACTGGGCCAA 1 chrIX:210505-210828 ( 55) GCCTTAACCAACTGGGCCAA 1 chrXVI:819354-819696 ( 60) GCCTTAACCAACTGGGCCAA 1 chrII:266227-266567 ( 37) CGCCTTACCAACTTGGCCAT 1 chrXIV:560576-560943 ( 31) CGCCTTACCAACTTGGCCAT 1 chrXV:113666-113933 ( 59) CGCCTTACCAACTTGGCCAT 1 chrVIII:115965-116335 ( 54) CGCCTTACCAACTTGGCCAT 1 chrIX:174860-175240 ( 37) CGCCTTACCAACTTGGCCAT 1 chrXI:84050-84360 ( 59) GCCTTAGACCACTCGGCCAA 1 chrVII:794271-794575 ( 50) CGCGCTACCAACTGCGCCAT 1 chrXI:74465-74782 ( 57) GCCTTAACCAACTTGGCCAT 1 chrXV:487294-487632 ( 32) GCCTTAACCAACTTGGCCAT 1 chrXIV:102555-102858 ( 66) GCCTTAACCAACTTGGCCAT 1 chrXVI:810499-810830 ( 68) GCCTTAACCAACTTGGCCAT 1 chrXIII:768272-768604 ( 28) CGCGCTACCGACTACGCCAC 1 chrVIII:146115-146486 ( 39) CGCGCTACCGACTACGCCAC 1 chrXVI:856730-857071 ( 58) CGCGCTACCGACTACGCCAC 1 chrXII:656849-657164 ( 25) CGCGCTACCGACTACGCCAC 1 chrXIII:504721-505111 ( 35) GCCTTAGACCGCTCGGCCAA 1 chrVII:857282-857639 ( 56) GCCTTAGACCGCTCGGCCAA 1 chrXII:628225-628609 ( 22) GCCTTAGACCGCTCGGCCAA 1 chrI:180979-181380 ( 18) GCCTTAGACCGCTCGGCCAA 1 chrXIV:442832-443251 ( 21) GCCTTAGACCGCTCGGCCAA 1 chrIV:359419-359799 ( 24) CGCTCTACCAACTGAGCTAA 1 chrXVI:769074-769483 ( 49) CGCTCTACCAACTGAGCTAA 1 chrXV:438508-438865 ( 13) CGCTCTACCAACTGAGCTAA 1 chrVII:115343-115718 ( 14) CGCTCTACCAACTGAGCTAA 1 chrIV:1352387-1352676 ( 32) CGCGCTACCGATTGCGCCAA 1 chrVII:876250-876565 ( 43) CGCGCTACCGATTGCGCCAA 1 chrIX:300133-300451 ( 33) CGCGCTACCGATTGCGCCAA 1 chrV:135258-135669 ( 59) CGCGCTACCGATTGCGCCAA 1 chrX:414821-414921 ( 41) CGCGCTACCGATTGCGCCAA 1 chrXVI:581879-582219 ( 69) CGCGCTACCGATTGCGCCAA 1 chrVII:122114-122444 ( 46) CGCGCTACCGATTGCGCCAA 1 chrVII:185618-185914 ( 45) CGCGCTACCGATTGCGCCAA 1 chrIV:1201589-1201944 ( 40) CGCGCTACCGATTGCGCCAA 1 chrXI:490818-491117 ( 57) CGCCGTGACCATTGGGCCAC 1 chrXII:374193-374561 ( 34) CGCCGTGACCATTGGGCCAC 1 chrX:233773-233873 ( 64) CGCCGTGACCATTGGGCCAC 1 chrVII:440573-440985 ( 53) CGCTCTCCCAACTGAGCTAA 1 chrXIII:352108-352502 ( 31) CGCTCTCCCAACTGAGCTAA 1 chrVIII:237759-238086 ( 42) CGCTCTCCCAACTGAGCTAA 1 chrVI:157813-158157 ( 47) CGCTCTCCCAACTGAGCTAA 1 chrII:36243-36551 ( 57) CGCTCTCCCAACTGAGCTAA 1 chrXIV:374724-375070 ( 28) CGCTCTCCCAACTGAGCTAA 1 chrXI:308057-308385 ( 21) GCCATAACCGACTAGACCAC 1 chrV:469310-469606 ( 55) GCCATAACCGACTAGACCAC 1 chrV:438553-438849 ( 55) GCCATAACCGACTAGACCAC 1 chrXV:980540-980887 ( 18) CCACTAGACCACACGCCCAT 1 chrVIII:388794-389156 ( 53) CCACTAGACCACACGCCCAT 1 chrVIII:85226-85534 ( 16) GCCATAACCGACTAGACCAC 1 chrX:378210-378310 ( 51) GCCATAACCGACTAGACCAC 1 chrXIII:372335-372657 ( 47) GCCATAACCGACTAGACCAC 1 chrXII:605169-605593 ( 76) AGCTCTAACCACTGAGCTAC 1 chrIV:884235-884583 ( 8) AGCTCTAACCACTGAGCTAC 1 chrIII:30-494 ( 14) CCCACACCCCACACCCACAC 1 chrXIV:567950-568334 ( 21) CCACTAGACCACACGCCCGA 1 chrXII:11061-11487 ( 48) CCCACACACCACACCCACAC 1 chrXII:5452-5852 ( 67) CCCACACACCACACCCACAC 1 chrIV:52-284 ( 3) CCCACACACCACACCCACAC 1 chrXV:464280-464640 ( 38) CCACTAGACCACACGCCCTT 1 chrVIII:562321-562607 ( 42) CCCACACACCACACCCACAC 1 chrXIII:5325-5770 ( 49) CCCACACACCACACCCACAC 1 chrXIII:195968-196352 ( 43) CCACTAGACCACACGCCCTT 1 chrI:139001-139319 ( 40) CCACTAGACCACACGCCCGT 1 chrI:109019-109409 ( 68) GTCATTGCCGACTGGCCCAT 1 chrXII:1064897-1065314 ( 28) CCCACACACCACACACACAC 1 chrIII:123458-123801 ( 52) CCTCTAGACCACACGCCCTC 1 chrX:531656-531756 ( 27) CCACTAAACCACTTGCGCTC 1 chrIII:142633-142925 ( 25) CCACTAAACCACTTGCGCTA 1 chrV:68929-69477 ( 17) CCCGTACCCCACAAAGCTTC 1 chrXV:282018-282312 ( 47) CCACTAAACCACTTGCGCGC 1 chrIV:1251720-1251957 ( 50) CGCGTTCCCAATAGGGCTGC 1 chrVII:786157-786547 ( 17) GCAATTAGCAATTCGGCCAA 1 chrVI:162084-162377 ( 46) CCACTAAACCACTTGCGCTT 1 chrVII:930875-931175 ( 31) CCACTAAACCACTTGCGCTT 1 chrXIV:783894-784164 ( 63) CCCACACACACCACACCCAC 1 chrIV:946129-946559 ( 24) CCTTAAACCAACTTGGCTAC 1 chrXIII:168641-169019 ( 21) CCTTAAACCAACTTGGCTAC 1 chrXVI:829114-829415 ( 59) CCCCGAAACACCACCCCCAT 1 chrXIII:296842-297064 ( 51) AGCATTACCCGCACACCCAT 1 chrX:390950-391050 ( 22) CGCTCTTCCTACTGAGCTAC 1 chrXV:160254-160588 ( 40) GCCATTGCCAGTTAAGCTAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CSCHYWAMCMACTSGGCCAH MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 46245 bayes= 9.97201 E= 2.8e-244 -333 177 43 -1332 -1332 130 127 -491 -133 207 -1332 -333 -75 71 -38 17 -392 75 -238 101 70 -1332 -1332 81 115 -38 -21 -491 61 141 -437 -1332 -1332 230 -1332 -1332 17 118 -5 -491 162 -337 -157 -1332 -1332 207 -1332 -101 -67 -1332 -1332 146 -133 91 75 -92 -75 2 160 -1332 -233 15 181 -1332 -211 212 -205 -1332 -1332 202 -1332 -75 157 -1332 -238 -192 51 75 -1332 -33 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CSCHYWAMCMACTSGGCCAH MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 102 E= 2.8e-244 0.029412 0.696078 0.274510 0.000000 0.000000 0.500000 0.490196 0.009804 0.117647 0.852941 0.000000 0.029412 0.176471 0.333333 0.156863 0.333333 0.019608 0.343137 0.039216 0.598039 0.480392 0.000000 0.000000 0.519608 0.656863 0.156863 0.176471 0.009804 0.450980 0.539216 0.009804 0.000000 0.000000 1.000000 0.000000 0.000000 0.333333 0.460784 0.196078 0.009804 0.911765 0.019608 0.068627 0.000000 0.000000 0.852941 0.000000 0.147059 0.186275 0.000000 0.000000 0.813725 0.117647 0.382353 0.343137 0.156863 0.176471 0.205882 0.617647 0.000000 0.058824 0.225490 0.715686 0.000000 0.068627 0.882353 0.049020 0.000000 0.000000 0.823529 0.000000 0.176471 0.882353 0.000000 0.039216 0.078431 0.421569 0.343137 0.000000 0.235294 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CSCHYWAMCMACTSGGCCAH MEME-1 regular expression -------------------------------------------------------------------------------- [CG][CG]C[CT][TC][TA]A[CA]C[CA]ACT[CG][GC][GC]CCA[ACT] -------------------------------------------------------------------------------- Time 322.30 secs. ******************************************************************************** ******************************************************************************** MOTIF KTAAYCRDRRGRTCMBGGGTTCGABYCCS MEME-2 width = 29 sites = 41 llr = 846 E-value = 8.8e-146 ******************************************************************************** -------------------------------------------------------------------------------- Motif KTAAYCRDRRGRTCMBGGGTTCGABYCCS MEME-2 Description -------------------------------------------------------------------------------- Simplified A 1168::3356243:5:11::::2a1:::1 pos.-specific C 122:371::::::7333::::a::34a76 probability G 4:1113434476::1468a:::8:2:::3 matrix T 36::5:141:::73:21::aa:::46:21 bits 2.3 * * * 2.1 * * * 1.8 **** * * 1.6 **** * * Relative 1.4 * * ******* * Entropy 1.1 * * * ******* ** (29.8 bits) 0.9 * * *** * ******* *** 0.7 * * ****** ********* **** 0.5 ***** **************** **** 0.2 ***************************** 0.0 ----------------------------- Multilevel GTAATCGTAAGGTCAGGGGTTCGATTCCC consensus TC CGAGGG AATCCC CC TG sequence A T G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTAAYCRDRRGRTCMBGGGTTCGABYCCS MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrVII:876250-876565 + 71 2.93e-13 CGTATGACTC TTAATCATAAGGTTAGGGGTTCGAGCCCC C chrV:135258-135669 - 22 2.93e-13 CGTATGACTC TTAATCATAAGGTTAGGGGTTCGAGCCCC CTACAGGGCT chrX:414821-414921 + 69 2.93e-13 CGTATGACTC TTAATCATAAGGTTAGGGGTTCGAGCCCC CTA chrVII:185618-185914 - 8 2.93e-13 CGTATGACTC TTAATCATAAGGTTAGGGGTTCGAGCCCC CTACAGG chrIV:1201589-1201944 + 68 2.93e-13 CGTATGACTC TTAATCATAAGGTTAGGGGTTCGAGCCCC CTAC chrV:354763-355179 + 46 1.29e-12 ACATCACGCT TTCACCGTGGAGACCGGGGTTCGACTCCC CGTATCGGAG chrV:176939-177367 + 29 1.29e-12 ACATCACGCT TTCACCGTGGAGACCGGGGTTCGACTCCC CGTATCGGAG chrXVI:210093-210403 - 4 1.29e-12 ACATCACGCT TTCACCGTGGAGACCGGGGTTCGACTCCC CGT chrVII:328429-328818 + 43 1.29e-12 ACATCACGCT TTCACCGTGGAGACCGGGGTTCGACTCCC CGTATCGGAG chrV:487212-487541 - 15 1.29e-12 ACATCACGCT TTCACCGTGGAGACCGGGGTTCGACTCCC CGTATCGGAG chrX:374349-374449 - 17 2.36e-12 CGTCTGACTT CTAATCAGAAGATTATGGGTTCGACCCCC ATCGTGAGTG chrVII:405321-405697 + 44 2.36e-12 CGTCTGACTT CTAATCAGAAGATTATGGGTTCGACCCCC ATCGTGAGTG chrII:405719-406119 + 42 2.36e-12 CGTCTGACTT CTAATCAGAAGATTATGGGTTCGACCCCC ATCGTGAGTG chrX:355212-355312 + 34 2.36e-12 CGTCTGACTT CTAATCAGAAGATTATGGGTTCGACCCCC ATCGTGAGTG chrXIV:602173-602497 + 62 6.32e-12 CACCGTGCTA ATAACGCGGGGATCAGCGGTTCGATCCCG CTAGAGACCA chrVII:738979-739298 + 69 6.32e-12 CACCGTGCTA ATAACGCGGGGATCAGCGGTTCGATCCCG CTA chrXVI:880169-880522 - 11 6.32e-12 CACCGTGCTA ATAACGCGGGGATCAGCGGTTCGATCCCG CTAGAGACCA chrI:166096-166550 + 28 1.39e-11 CGCTTCCCTT GCAAGGAAGAGGTCATCGGTTCGATTCCG GTTGCGTCCA chrIII:123458-123801 - 8 8.02e-11 TTCTCGCTTA GGGTGCGGGAGGTCCCGGGTTCGAGTCCC GGCTCGC chrX:531656-531756 + 61 1.67e-10 ATCCAACGTT GCCATCGTTGGGCCCCCGGTTCGATTCCG GGCTTGCGCA chrII:266227-266567 + 65 2.04e-10 CGCCACACTA GTAATGTGGAGATCATCGGTTCAAATCCG ATTGGAA chrVII:779473-779813 + 56 2.04e-10 ATCCCACCCT TCCAAGGTGGGGACACGGGTTCGATTCTC GTACCGCTCA chrVIII:115965-116335 - 17 2.04e-10 CGCCACACTA GTAATGTGGAGATCATCGGTTCAAATCCG ATTGGAAGCA chrXV:110826-111201 - 9 2.04e-10 ATCCCACCCT TCCAAGGTGGGGACACGGGTTCGATTCTC GTACCGCT chrIX:174860-175240 + 65 2.04e-10 CGCCACACTA GTAATGTGGAGATCATCGGTTCAAATCCG ATTGGAA chrXV:438508-438865 + 64 2.48e-10 CTTAAGCAAG GATACCGAAATGTCAGGGGTTCGAGCCCC CTATGAGG chrVII:115343-115718 + 65 2.48e-10 CTTAAGCAAG GATACCGAAATGTCAGGGGTTCGAGCCCC CTATGAG chrVIII:146115-146486 - 2 1.15e-09 CGCTCCCTTA GCATGGGAGAGGTCTCCGGTTCGATTCCG G chrIV:946129-946559 + 68 1.35e-09 TTATCACTAC GAAATCTTGAGATCGGGCGTTCGACTCGC CCCC chrXIII:168641-169019 + 65 1.35e-09 TTACCACTAC GAAATCTTGAGATCGGGCGTTCGACTCGC CCCCGGG chrXVI:55912-56447 - 50 1.35e-09 GAATAAGATT GCAATCGAAGGGTTGCAGGTTCAATTCCT GTCCGTTTCA chrVII:878521-878973 - 23 1.35e-09 GAATAAGATT GCAATCGAAGGGTTGCAGGTTCAATTCCT GTCCGTTTCA chrXV:487294-487632 + 61 2.53e-09 CGTGCGACTG TTAATCGCAAGATCGTGAGTTCAACCCTC ACTGGGGTCG chrVIII:475571-475912 - 25 6.36e-09 CGTTGCCTTC ACACGGCAAAGGTCCCGAGTTCGATCCTC GGTTGGAACA chrXVI:744129-744482 + 62 7.75e-09 CGTTGCACTT GTAATGCAAAGGTCGTTAGTTCAATTCTG ACAGGTGGCA chrXII:374193-374561 + 62 8.81e-09 CGTCTGGCTA CGAACCAGAAGATTCCAGGTTCAAGTCCT GGCGGGGAAG chrXIII:808125-808481 - 3 8.81e-09 ACTTTCGGTT CTGATCCGAACAACCCCAGTTCGAATCCG GG chrXIII:372335-372657 - 9 2.38e-08 CATCTGCTTA ACACGCAGAACGTCCCCAGTTCGATCCTG GGCGAAAT chrV:434405-434784 - 7 3.09e-08 ACACATCGTT GTGGCCGATGAAACCCTGGTTCGATTCTA GGAGAT chrVII:110510-110858 - 1 3.09e-08 ACACATCGTT GTGGCCGATGAAACCCTGGTTCGATTCTA chrVII:319619-320019 + 45 3.09e-08 ACACATCGTT GTGGCCGATGAAACCCTGGTTCGATTCTA GGAGATGGCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTAAYCRDRRGRTCMBGGGTTCGABYCCS MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrVII:876250-876565 2.9e-13 70_[+2]_1 chrV:135258-135669 2.9e-13 21_[-2]_50 chrX:414821-414921 2.9e-13 68_[+2]_3 chrVII:185618-185914 2.9e-13 7_[-2]_64 chrIV:1201589-1201944 2.9e-13 67_[+2]_4 chrV:354763-355179 1.3e-12 45_[+2]_26 chrV:176939-177367 1.3e-12 28_[+2]_43 chrXVI:210093-210403 1.3e-12 3_[-2]_68 chrVII:328429-328818 1.3e-12 42_[+2]_29 chrV:487212-487541 1.3e-12 14_[-2]_57 chrX:374349-374449 2.4e-12 16_[-2]_55 chrVII:405321-405697 2.4e-12 43_[+2]_28 chrII:405719-406119 2.4e-12 41_[+2]_30 chrX:355212-355312 2.4e-12 33_[+2]_38 chrXIV:602173-602497 6.3e-12 61_[+2]_10 chrVII:738979-739298 6.3e-12 68_[+2]_3 chrXVI:880169-880522 6.3e-12 10_[-2]_61 chrI:166096-166550 1.4e-11 27_[+2]_44 chrIII:123458-123801 8e-11 7_[-2]_64 chrX:531656-531756 1.7e-10 60_[+2]_11 chrII:266227-266567 2e-10 64_[+2]_7 chrVII:779473-779813 2e-10 55_[+2]_16 chrVIII:115965-116335 2e-10 16_[-2]_55 chrXV:110826-111201 2e-10 8_[-2]_63 chrIX:174860-175240 2e-10 64_[+2]_7 chrXV:438508-438865 2.5e-10 63_[+2]_8 chrVII:115343-115718 2.5e-10 64_[+2]_7 chrVIII:146115-146486 1.1e-09 1_[-2]_70 chrIV:946129-946559 1.3e-09 67_[+2]_4 chrXIII:168641-169019 1.3e-09 64_[+2]_7 chrXVI:55912-56447 1.3e-09 49_[-2]_22 chrVII:878521-878973 1.3e-09 22_[-2]_49 chrXV:487294-487632 2.5e-09 60_[+2]_11 chrVIII:475571-475912 6.4e-09 24_[-2]_47 chrXVI:744129-744482 7.7e-09 61_[+2]_10 chrXII:374193-374561 8.8e-09 61_[+2]_10 chrXIII:808125-808481 8.8e-09 2_[-2]_69 chrXIII:372335-372657 2.4e-08 8_[-2]_63 chrV:434405-434784 3.1e-08 6_[-2]_65 chrVII:110510-110858 3.1e-08 [-2]_71 chrVII:319619-320019 3.1e-08 44_[+2]_27 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTAAYCRDRRGRTCMBGGGTTCGABYCCS MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF KTAAYCRDRRGRTCMBGGGTTCGABYCCS width=29 seqs=41 chrVII:876250-876565 ( 71) TTAATCATAAGGTTAGGGGTTCGAGCCCC 1 chrV:135258-135669 ( 22) TTAATCATAAGGTTAGGGGTTCGAGCCCC 1 chrX:414821-414921 ( 69) TTAATCATAAGGTTAGGGGTTCGAGCCCC 1 chrVII:185618-185914 ( 8) TTAATCATAAGGTTAGGGGTTCGAGCCCC 1 chrIV:1201589-1201944 ( 68) TTAATCATAAGGTTAGGGGTTCGAGCCCC 1 chrV:354763-355179 ( 46) TTCACCGTGGAGACCGGGGTTCGACTCCC 1 chrV:176939-177367 ( 29) TTCACCGTGGAGACCGGGGTTCGACTCCC 1 chrXVI:210093-210403 ( 4) TTCACCGTGGAGACCGGGGTTCGACTCCC 1 chrVII:328429-328818 ( 43) TTCACCGTGGAGACCGGGGTTCGACTCCC 1 chrV:487212-487541 ( 15) TTCACCGTGGAGACCGGGGTTCGACTCCC 1 chrX:374349-374449 ( 17) CTAATCAGAAGATTATGGGTTCGACCCCC 1 chrVII:405321-405697 ( 44) CTAATCAGAAGATTATGGGTTCGACCCCC 1 chrII:405719-406119 ( 42) CTAATCAGAAGATTATGGGTTCGACCCCC 1 chrX:355212-355312 ( 34) CTAATCAGAAGATTATGGGTTCGACCCCC 1 chrXIV:602173-602497 ( 62) ATAACGCGGGGATCAGCGGTTCGATCCCG 1 chrVII:738979-739298 ( 69) ATAACGCGGGGATCAGCGGTTCGATCCCG 1 chrXVI:880169-880522 ( 11) ATAACGCGGGGATCAGCGGTTCGATCCCG 1 chrI:166096-166550 ( 28) GCAAGGAAGAGGTCATCGGTTCGATTCCG 1 chrIII:123458-123801 ( 8) GGGTGCGGGAGGTCCCGGGTTCGAGTCCC 1 chrX:531656-531756 ( 61) GCCATCGTTGGGCCCCCGGTTCGATTCCG 1 chrII:266227-266567 ( 65) GTAATGTGGAGATCATCGGTTCAAATCCG 1 chrVII:779473-779813 ( 56) TCCAAGGTGGGGACACGGGTTCGATTCTC 1 chrVIII:115965-116335 ( 17) GTAATGTGGAGATCATCGGTTCAAATCCG 1 chrXV:110826-111201 ( 9) TCCAAGGTGGGGACACGGGTTCGATTCTC 1 chrIX:174860-175240 ( 65) GTAATGTGGAGATCATCGGTTCAAATCCG 1 chrXV:438508-438865 ( 64) GATACCGAAATGTCAGGGGTTCGAGCCCC 1 chrVII:115343-115718 ( 65) GATACCGAAATGTCAGGGGTTCGAGCCCC 1 chrVIII:146115-146486 ( 2) GCATGGGAGAGGTCTCCGGTTCGATTCCG 1 chrIV:946129-946559 ( 68) GAAATCTTGAGATCGGGCGTTCGACTCGC 1 chrXIII:168641-169019 ( 65) GAAATCTTGAGATCGGGCGTTCGACTCGC 1 chrXVI:55912-56447 ( 50) GCAATCGAAGGGTTGCAGGTTCAATTCCT 1 chrVII:878521-878973 ( 23) GCAATCGAAGGGTTGCAGGTTCAATTCCT 1 chrXV:487294-487632 ( 61) TTAATCGCAAGATCGTGAGTTCAACCCTC 1 chrVIII:475571-475912 ( 25) ACACGGCAAAGGTCCCGAGTTCGATCCTC 1 chrXVI:744129-744482 ( 62) GTAATGCAAAGGTCGTTAGTTCAATTCTG 1 chrXII:374193-374561 ( 62) CGAACCAGAAGATTCCAGGTTCAAGTCCT 1 chrXIII:808125-808481 ( 3) CTGATCCGAACAACCCCAGTTCGAATCCG 1 chrXIII:372335-372657 ( 9) ACACGCAGAACGTCCCCAGTTCGATCCTG 1 chrV:434405-434784 ( 7) GTGGCCGATGAAACCCTGGTTCGATTCTA 1 chrVII:110510-110858 ( 1) GTGGCCGATGAAACCCTGGTTCGATTCTA 1 chrVII:319619-320019 ( 45) GTGGCCGATGAAACCCTGGTTCGATTCTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTAAYCRDRRGRTCMBGGGTTCGABYCCS MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 41106 bayes= 9.43258 E= 8.8e-146 -128 -48 103 10 -160 11 -206 110 110 -6 -74 -260 148 -206 -148 -260 -260 75 -74 72 -1200 180 52 -1200 -2 -48 111 -128 -14 -306 75 30 64 -1200 111 -160 104 -1200 94 -1200 -60 -206 180 -260 57 -1200 146 -1200 -14 -306 -1200 125 -1200 180 -1200 -2 72 75 -48 -360 -1200 75 103 -28 -202 40 146 -160 -128 -206 203 -1200 -1200 -1200 230 -1200 -1200 -1200 -1200 175 -1200 -1200 -1200 175 -1200 230 -1200 -1200 -60 -1200 198 -1200 175 -1200 -1200 -1200 -160 52 11 40 -1200 103 -1200 98 -1200 230 -1200 -1200 -1200 185 -206 -43 -202 146 52 -202 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTAAYCRDRRGRTCMBGGGTTCGABYCCS MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 41 E= 8.8e-146 0.121951 0.146341 0.414634 0.317073 0.097561 0.219512 0.048780 0.634146 0.634146 0.195122 0.121951 0.048780 0.829268 0.048780 0.073171 0.048780 0.048780 0.341463 0.121951 0.487805 0.000000 0.707317 0.292683 0.000000 0.292683 0.146341 0.439024 0.121951 0.268293 0.024390 0.341463 0.365854 0.463415 0.000000 0.439024 0.097561 0.609756 0.000000 0.390244 0.000000 0.195122 0.048780 0.707317 0.048780 0.439024 0.000000 0.560976 0.000000 0.268293 0.024390 0.000000 0.707317 0.000000 0.707317 0.000000 0.292683 0.487805 0.341463 0.146341 0.024390 0.000000 0.341463 0.414634 0.243902 0.073171 0.268293 0.560976 0.097561 0.121951 0.048780 0.829268 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.195122 0.000000 0.804878 0.000000 1.000000 0.000000 0.000000 0.000000 0.097561 0.292683 0.219512 0.390244 0.000000 0.414634 0.000000 0.585366 0.000000 1.000000 0.000000 0.000000 0.000000 0.731707 0.048780 0.219512 0.073171 0.560976 0.292683 0.073171 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTAAYCRDRRGRTCMBGGGTTCGABYCCS MEME-2 regular expression -------------------------------------------------------------------------------- [GT][TC]AA[TC][CG][GA][TGA][AG][AG]G[GA][TA][CT][AC][GCT][GC]GGTTCGA[TCG][TC]C[CT][CG] -------------------------------------------------------------------------------- Time 605.01 secs. ******************************************************************************** ******************************************************************************** MOTIF AASSDNRHRTGMTAACCAYTACACTATMDB MEME-3 width = 30 sites = 29 llr = 686 E-value = 2.1e-120 ******************************************************************************** -------------------------------------------------------------------------------- Motif AASSDNRHRTGMTAACCAYTACACTATMDB MEME-3 Description -------------------------------------------------------------------------------- Simplified A a7::22533:26:87::7::92a::a344: pos.-specific C ::64:222:::4:::aa:6::6:a1:1314 probability G :34643317:6::23::3::1::::::223 matrix T ::::32:4:a2:a:::::4a:2::9:6132 bits 2.3 ** * 2.1 ** * 1.8 * * * ** * ** * 1.6 * * * ** * ** * Relative 1.4 * ** * * ** ** **** Entropy 1.1 * ** ** ********* **** (34.1 bits) 0.9 **** ** ********** **** 0.7 **** ****************** 0.5 **** * ******************* * 0.2 ***** * ******************** * 0.0 ------------------------------ Multilevel AACGGGATGTGATAACCACTACACTATAAC consensus GGCTAGAA TC G GT A ACTG sequence AT C GT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AASSDNRHRTGMTAACCAYTACACTATMDB MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chrIII:168206-168550 + 12 1.37e-14 TCCGGATCAA AACCGAAAGTGATAACCACTACACTATAGG ACCAGGACTT chrXII:448546-448877 + 28 1.37e-14 TCCGGATCAA AACCGAAAGTGATAACCACTACACTATAGG ACCGGAACTT chrIV:802622-802971 + 24 1.37e-14 TCCGGATCAA AACCGAAAGTGATAACCACTACACTATAGG ACCGACAATT chrIV:645058-645391 + 18 1.37e-14 TCCGGATCAA AACCGAAAGTGATAACCACTACACTATAGG ACCGTAACAA chrXIII:808125-808481 + 32 1.37e-14 TTCGGATCAG AACCGAAAGTGATAACCACTACACTATAGG ACCTTTTTCT chrV:354763-355179 - 16 1.68e-13 CCACGGTGAA AGCGTGATGTGATAGCCGTTACACTATATC GGATTACAAT chrXVI:210093-210403 + 33 1.68e-13 CCACGGTGAA AGCGTGATGTGATAGCCGTTACACTATATC GGACAATAAT chrVII:328429-328818 - 13 1.68e-13 CCACGGTGAA AGCGTGATGTGATAGCCGTTACACTATATC GGACAATAAT chrXIII:290658-290958 - 46 1.68e-13 CCACGGTGAA AGCGTGATGTGATAGCCGTTACACTATATC GGATTATATT chrIII:82419-82666 + 9 1.68e-13 ACGGTGAA AGCGTGATGTGATAGCCGTTACACTATATC GGATAACAAA chrV:487212-487541 + 44 1.68e-13 CCACGGTGAA AGCGTGATGTGATAGCCGTTACACTATATC GGATTAAATT chrIV:1017100-1017442 + 25 1.14e-12 CCACGGTGAG AACGTGATGTGATAGCCGTTACACTACATC GGATTGTACC chrV:130992-131311 + 20 1.78e-12 TTCGGATCAA AACCGAAAGTGATAACCACTACACTATAAA ACCTCTTAAT chrVII:779473-779813 - 26 1.02e-11 CCACCTTGGA AGGGTGGGATGATAACCACTACACTAACCG CCCGGGGTTA chrXV:110826-111201 + 38 1.02e-11 CCACCTTGGA AGGGTGGGATGATAACCACTACACTAACCG CCCGGGTTAA chrXIV:96105-96554 + 1 1.02e-11 . AGGGTGGGATGATAACCACTACACTAACCG CCCATGTGTT chrV:434405-434784 + 36 4.37e-11 CATCGGCCAC AACGATGTGTACTAACCACTATACTAAGAT GGCGACTTTT chrVII:110510-110858 + 30 4.37e-11 CATCGGCCAC AACGATGTGTACTAACCACTATACTAAGAT GGCAGGTAAT chrVII:319619-320019 - 15 4.37e-11 CATCGGCCAC AACGATGTGTACTAACCACTATACTAAGAT GGCTAATTTC chrV:207204-207529 - 44 4.37e-11 CATCGGCCAC AACGATGTGTACTAACCACTATACTAAGAT GGCGAACTTA chrVIII:62594-62918 - 52 4.37e-11 CATCGGCCAC AACGATGTGTACTAACCACTATACTAAGAT GGCATATGAT chrVIII:475571-475912 + 55 4.72e-11 TTGCCGTGTG AAGGCAACGTGATAGCCGCTACACTATTGG AACAGACTTT chrVII:531475-531752 - 50 7.17e-11 GGCACGCGAC AAGCGCCCATTCTGACCATTAAACTATCAC GGAAGTAACT chrIX:324207-324533 + 22 7.17e-11 GGCACGCGAC AAGCGCCCATTCTGACCATTAAACTATCAC GGAATATTAG chrX:541354-541454 - 56 7.17e-11 GGCACGCGAC AAGCGCCCATTCTGACCATTAAACTATCAC GGATTTTCTT chrXII:426978-427287 - 53 7.17e-11 GGCACGCGAC AAGCGCCCATTCTGACCATTAAACTATCAC GGATAAGAAA chrVII:544479-544825 + 14 7.17e-11 GGCACGCGAC AAGCGCCCATTCTGACCATTAAACTATCAC GGAAGAAATA chrXV:594260-594585 + 21 7.22e-10 CATGCTTGGG AAGCATAAATTCTAACCACTGAACCACTTG CGCGTTTCAA chrIV:1256934-1257236 + 12 1.11e-09 CATGCTTGGG AAGCATGAATTCTAACCACTGAACCACTTT CGCTAAGAAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AASSDNRHRTGMTAACCAYTACACTATMDB MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:168206-168550 1.4e-14 11_[+3]_59 chrXII:448546-448877 1.4e-14 27_[+3]_43 chrIV:802622-802971 1.4e-14 23_[+3]_47 chrIV:645058-645391 1.4e-14 17_[+3]_53 chrXIII:808125-808481 1.4e-14 31_[+3]_39 chrV:354763-355179 1.7e-13 15_[-3]_55 chrXVI:210093-210403 1.7e-13 32_[+3]_38 chrVII:328429-328818 1.7e-13 12_[-3]_58 chrXIII:290658-290958 1.7e-13 45_[-3]_25 chrIII:82419-82666 1.7e-13 8_[+3]_62 chrV:487212-487541 1.7e-13 43_[+3]_27 chrIV:1017100-1017442 1.1e-12 24_[+3]_46 chrV:130992-131311 1.8e-12 19_[+3]_51 chrVII:779473-779813 1e-11 25_[-3]_45 chrXV:110826-111201 1e-11 37_[+3]_33 chrXIV:96105-96554 1e-11 [+3]_70 chrV:434405-434784 4.4e-11 35_[+3]_35 chrVII:110510-110858 4.4e-11 29_[+3]_41 chrVII:319619-320019 4.4e-11 14_[-3]_56 chrV:207204-207529 4.4e-11 43_[-3]_27 chrVIII:62594-62918 4.4e-11 51_[-3]_19 chrVIII:475571-475912 4.7e-11 54_[+3]_16 chrVII:531475-531752 7.2e-11 49_[-3]_21 chrIX:324207-324533 7.2e-11 21_[+3]_49 chrX:541354-541454 7.2e-11 55_[-3]_15 chrXII:426978-427287 7.2e-11 52_[-3]_18 chrVII:544479-544825 7.2e-11 13_[+3]_57 chrXV:594260-594585 7.2e-10 20_[+3]_50 chrIV:1256934-1257236 1.1e-09 11_[+3]_59 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AASSDNRHRTGMTAACCAYTACACTATMDB MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AASSDNRHRTGMTAACCAYTACACTATMDB width=30 seqs=29 chrIII:168206-168550 ( 12) AACCGAAAGTGATAACCACTACACTATAGG 1 chrXII:448546-448877 ( 28) AACCGAAAGTGATAACCACTACACTATAGG 1 chrIV:802622-802971 ( 24) AACCGAAAGTGATAACCACTACACTATAGG 1 chrIV:645058-645391 ( 18) AACCGAAAGTGATAACCACTACACTATAGG 1 chrXIII:808125-808481 ( 32) AACCGAAAGTGATAACCACTACACTATAGG 1 chrV:354763-355179 ( 16) AGCGTGATGTGATAGCCGTTACACTATATC 1 chrXVI:210093-210403 ( 33) AGCGTGATGTGATAGCCGTTACACTATATC 1 chrVII:328429-328818 ( 13) AGCGTGATGTGATAGCCGTTACACTATATC 1 chrXIII:290658-290958 ( 46) AGCGTGATGTGATAGCCGTTACACTATATC 1 chrIII:82419-82666 ( 9) AGCGTGATGTGATAGCCGTTACACTATATC 1 chrV:487212-487541 ( 44) AGCGTGATGTGATAGCCGTTACACTATATC 1 chrIV:1017100-1017442 ( 25) AACGTGATGTGATAGCCGTTACACTACATC 1 chrV:130992-131311 ( 20) AACCGAAAGTGATAACCACTACACTATAAA 1 chrVII:779473-779813 ( 26) AGGGTGGGATGATAACCACTACACTAACCG 1 chrXV:110826-111201 ( 38) AGGGTGGGATGATAACCACTACACTAACCG 1 chrXIV:96105-96554 ( 1) AGGGTGGGATGATAACCACTACACTAACCG 1 chrV:434405-434784 ( 36) AACGATGTGTACTAACCACTATACTAAGAT 1 chrVII:110510-110858 ( 30) AACGATGTGTACTAACCACTATACTAAGAT 1 chrVII:319619-320019 ( 15) AACGATGTGTACTAACCACTATACTAAGAT 1 chrV:207204-207529 ( 44) AACGATGTGTACTAACCACTATACTAAGAT 1 chrVIII:62594-62918 ( 52) AACGATGTGTACTAACCACTATACTAAGAT 1 chrVIII:475571-475912 ( 55) AAGGCAACGTGATAGCCGCTACACTATTGG 1 chrVII:531475-531752 ( 50) AAGCGCCCATTCTGACCATTAAACTATCAC 1 chrIX:324207-324533 ( 22) AAGCGCCCATTCTGACCATTAAACTATCAC 1 chrX:541354-541454 ( 56) AAGCGCCCATTCTGACCATTAAACTATCAC 1 chrXII:426978-427287 ( 53) AAGCGCCCATTCTGACCATTAAACTATCAC 1 chrVII:544479-544825 ( 14) AAGCGCCCATTCTGACCATTAAACTATCAC 1 chrXV:594260-594585 ( 21) AAGCATAAATTCTAACCACTGAACCACTTG 1 chrIV:1256934-1257236 ( 12) AAGCATGAATTCTAACCACTGAACCACTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AASSDNRHRTGMTAACCAYTACACTATMDB MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 40535 bayes= 11.089 E= 2.1e-120 175 -1150 -1150 -1150 122 -1150 61 -1150 -1150 161 90 -1150 -1150 114 144 -1150 -30 -256 90 22 -30 -24 76 -30 80 -24 61 -1150 -10 2 -98 48 22 -1150 169 -1150 -1150 -1150 -1150 175 -78 -1150 153 -30 98 102 -1150 -1150 -1150 -1150 -1150 175 148 -1150 -24 -1150 129 -1150 44 -1150 -1150 230 -1150 -1150 -1150 230 -1150 -1150 129 -1150 44 -1150 -1150 153 -1150 48 -1150 -1150 -1150 175 165 -1150 -156 -1150 -30 153 -1150 -78 175 -1150 -1150 -1150 -1150 230 -1150 -1150 -1150 -156 -1150 165 175 -1150 -1150 -1150 -10 -98 -1150 107 60 44 -24 -152 36 -98 2 7 -310 102 76 -52 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AASSDNRHRTGMTAACCAYTACACTATMDB MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 29 E= 2.1e-120 1.000000 0.000000 0.000000 0.000000 0.689655 0.000000 0.310345 0.000000 0.000000 0.620690 0.379310 0.000000 0.000000 0.448276 0.551724 0.000000 0.241379 0.034483 0.379310 0.344828 0.241379 0.172414 0.344828 0.241379 0.517241 0.172414 0.310345 0.000000 0.275862 0.206897 0.103448 0.413793 0.344828 0.000000 0.655172 0.000000 0.000000 0.000000 0.000000 1.000000 0.172414 0.000000 0.586207 0.241379 0.586207 0.413793 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.827586 0.000000 0.172414 0.000000 0.724138 0.000000 0.275862 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.724138 0.000000 0.275862 0.000000 0.000000 0.586207 0.000000 0.413793 0.000000 0.000000 0.000000 1.000000 0.931034 0.000000 0.068966 0.000000 0.241379 0.586207 0.000000 0.172414 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.068966 0.000000 0.931034 1.000000 0.000000 0.000000 0.000000 0.275862 0.103448 0.000000 0.620690 0.448276 0.275862 0.172414 0.103448 0.379310 0.103448 0.206897 0.310345 0.034483 0.413793 0.344828 0.206897 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AASSDNRHRTGMTAACCAYTACACTATMDB MEME-3 regular expression -------------------------------------------------------------------------------- A[AG][CG][GC][GTA][GAT][AG][TAC][GA]T[GT][AC]TA[AG]CC[AG][CT]TA[CA]ACTA[TA][AC][ATG][CGT] -------------------------------------------------------------------------------- Time 883.27 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:96105-96554 2.16e-08 [+3(1.02e-11)]_70 chrVII:310568-310837 7.64e-01 100 chrXII:809922-810312 2.75e-01 100 chrXIII:372335-372657 2.69e-08 8_[-2(2.38e-08)]_9_[+1(2.17e-07)]_\ 34 chrIV:1403070-1403254 5.95e-01 100 chrXI:518817-519337 9.78e-01 100 chrXIV:567950-568334 4.43e-05 20_[-1(1.10e-06)]_60 chrXV:159467-160311 2.49e-01 100 chrXIII:296842-297064 1.79e-02 50_[+1(6.49e-06)]_30 chrXI:31-207 1.07e-01 100 chrV:487212-487541 2.85e-18 14_[-2(1.29e-12)]_[+3(1.68e-13)]_27 chrVII:277817-278262 7.97e-02 100 chrIX:248674-249003 8.71e-07 67_[-1(8.80e-11)]_13 chrI:166096-166550 3.04e-07 27_[+2(1.39e-11)]_44 chrIV:840657-841047 8.83e-01 100 chrXIII:195968-196352 6.01e-05 42_[+1(1.38e-06)]_38 chrIX:254258-254458 1.35e-01 100 chrIV:1201589-1201944 6.34e-15 39_[-1(3.74e-08)]_8_[+2(2.93e-13)]_\ 4 chrIII:261751-262141 3.29e-01 100 chrXIII:808125-808481 3.56e-17 2_[-2(8.81e-09)]_[+3(1.37e-14)]_39 chrXIV:502101-502336 1.18e-01 100 chrIV:835820-836116 3.73e-01 100 chrII:625358-625757 8.91e-01 100 chrXI:108822-109008 2.48e-01 100 chrXII:650149-650539 1.88e-01 100 chrIV:750811-751303 6.13e-01 100 chrXII:535856-536246 1.71e-01 100 chrXIV:707818-708208 3.52e-03 79_[+1(1.43e-05)]_1 chrV:467903-468210 6.37e-01 100 chrXIV:254517-254907 6.64e-02 26_[+1(9.93e-05)]_54 chrXVI:645419-645551 5.65e-01 100 chrVII:700503-701213 9.48e-01 100 chrVIII:126478-126868 4.03e-01 100 chrXV:796921-797339 6.98e-02 6_[+2(9.43e-05)]_65 chrIV:645058-645391 4.33e-12 17_[+3(1.37e-14)]_53 chrVIII:233496-233886 7.15e-01 100 chrXIV:442832-443251 3.22e-04 20_[-1(2.97e-08)]_60 chrVIII:122426-122554 2.00e-01 100 chrVII:930875-931175 1.51e-03 30_[+1(4.20e-06)]_50 chrXII:794800-795268 7.30e-01 100 chrVIII:54390-54658 8.70e-01 100 chrVIII:396798-397051 8.32e-01 100 chrX:378210-378310 4.54e-04 50_[-1(2.17e-07)]_30 chrVII:649029-649271 4.76e-01 100 chrXIII:163996-164094 8.56e-01 98 chrXIII:389030-389420 9.14e-01 100 chrV:358204-358594 1.50e-01 100 chrXV:444793-445935 1.97e-01 100 chrVII:544479-544825 2.54e-07 13_[+3(7.17e-11)]_57 chrVII:479810-482725 9.46e-01 100 chrII:429359-429531 3.12e-01 100 chrXV:30-237 4.29e-02 100 chrXII:871714-872104 3.93e-01 100 chrII:613486-613682 4.35e-01 100 chrXIV:783894-784164 2.10e-02 62_[-1(4.48e-06)]_18 chrIX:321854-322336 9.51e-02 65_[+3(4.31e-05)]_5 chrXV:832314-832702 6.49e-01 100 chrIII:228697-229052 8.06e-01 100 chrXIII:23958-25782 5.31e-01 100 chrXII:369621-370308 7.82e-01 100 chrXII:348281-348671 6.76e-01 100 chrXIV:241506-241638 4.19e-01 100 chrIV:1270285-1270507 2.33e-01 100 chrVI:65061-65280 5.74e-01 100 chrIV:802622-802971 2.55e-12 23_[+3(1.37e-14)]_47 chrX:531656-531756 3.77e-10 26_[-1(2.63e-06)]_14_[+2(1.67e-10)]_\ 11 chrXV:282018-282312 1.22e-03 46_[-1(3.23e-06)]_34 chrVII:557113-557503 1.89e-01 100 chrXV:798113-798267 3.61e-01 100 chrVI:64283-64673 9.20e-01 100 chrXII:368882-369613 2.06e-01 100 chrII:680331-680679 1.45e-01 100 chrXI:141860-142088 1.17e-01 100 chrXIII:760543-760770 8.03e-02 100 chrII:614545-614935 3.58e-01 100 chrXII:691218-691591 2.61e-01 100 chrXVI:819354-819696 6.39e-06 59_[-1(5.90e-10)]_21 chrXIV:303128-303497 9.15e-02 100 chrVII:254189-254497 5.88e-01 100 chrXVI:173369-173590 4.41e-01 100 chrXVI:66986-67392 1.20e-01 100 chrVII:921261-921651 3.38e-01 100 chrII:197341-197874 9.60e-01 100 chrIX:98546-98936 1.46e-01 100 chrVII:185618-185914 6.34e-15 7_[-2(2.93e-13)]_8_[+1(3.74e-08)]_\ 36 chrXVI:701285-701506 4.69e-02 100 chrXII:729666-729835 6.91e-01 100 chrXII:636835-639117 5.27e-01 100 chrXV:79839-80078 5.04e-01 100 chrIII:30401-30853 7.73e-01 100 chrX:453647-453747 2.64e-01 100 chrIV:237770-238160 7.43e-01 100 chrXI:326369-327505 2.27e-01 100 chrVII:311052-311949 1.50e-01 100 chrXVI:76395-76671 5.23e-01 100 chrIII:105189-105579 3.94e-01 100 chrXV:216307-216615 9.27e-01 100 chrII:477556-477946 5.80e-01 100 chrXI:334532-334909 1.12e-01 100 chrXIII:747803-748117 2.20e-01 100 chrXI:38688-39078 7.08e-01 100 chrXIV:722431-722821 6.23e-01 100 chrII:45994-46203 5.71e-01 100 chrV:295124-295514 4.95e-01 100 chrXIII:288844-289234 5.61e-01 100 chrXIV:88977-89697 9.77e-01 100 chrV:267836-268226 5.30e-01 100 chrIV:1402317-1402538 5.50e-01 100 chrXII:523087-523221 1.40e-01 100 chrXIV:63726-63947 3.25e-01 100 chrX:538407-538507 4.37e-02 100 chrVII:115343-115718 4.51e-13 13_[-1(3.34e-08)]_31_[+2(2.48e-10)]_\ 7 chrIII:78780-79105 7.55e-01 100 chrXVI:95130-95452 4.75e-01 100 chrVII:555590-555980 5.99e-01 100 chrXVI:108862-109252 3.31e-01 100 chrX:195203-195303 6.63e-01 100 chrX:233773-233873 3.13e-05 63_[-1(8.05e-08)]_17 chrII:394252-394642 5.90e-01 100 chrIV:884235-884583 3.40e-07 7_[-1(6.26e-07)]_73 chrVIII:385677-385989 5.86e-01 100 chrXV:866624-866903 6.79e-02 38_[-2(7.96e-05)]_33 chrVII:661588-661910 7.66e-02 69_[-2(7.96e-05)]_2 chrVII:122114-122444 1.05e-05 45_[-1(3.74e-08)]_35 chrXII:426978-427287 2.54e-07 52_[-3(7.17e-11)]_18 chrIV:1308527-1308917 2.31e-02 66_[-3(5.54e-05)]_4 chrVIII:98522-98912 7.49e-01 100 chrIX:269052-269442 8.40e-01 100 chrIV:555803-556272 4.87e-01 100 chrXIV:495258-495537 4.77e-01 100 chrXII:424239-424449 2.34e-01 100 chrVII:316872-317262 9.66e-01 100 chrIII:214400-214504 3.51e-01 100 chrXII:1064897-1065314 7.62e-03 7_[-1(2.15e-05)]_[-1(1.99e-06)]_53 chrVII:906042-906432 8.51e-02 100 chrVIII:234142-234532 3.54e-02 5_[+1(6.51e-05)]_75 chrX:355212-355312 8.61e-09 33_[+2(2.36e-12)]_38 chrXIV:374724-375070 2.26e-05 27_[-1(9.91e-08)]_53 chrII:606674-606938 2.50e-01 100 chrXV:779765-780982 4.39e-01 100 chrII:405719-406119 4.54e-09 41_[+2(2.36e-12)]_30 chrIV:331019-331293 7.43e-02 100 chrXIII:20762-21152 1.07e-01 100 chrIV:541525-541774 1.86e-02 47_[-2(8.57e-05)]_24 chrXII:260051-260441 3.70e-01 100 chrVIII:382979-383264 1.81e-02 34_[-1(4.30e-05)]_46 chrVII:794271-794575 1.09e-07 49_[-1(5.63e-09)]_31 chrIII:138158-138787 6.68e-02 100 chrX:73447-73547 9.53e-01 100 chrXI:283393-283661 6.76e-01 100 chrXV:882170-882494 8.26e-01 100 chrIV:1301723-1302113 3.53e-01 100 chrXV:254317-254707 9.79e-02 100 chrVIII:505875-506136 4.53e-01 100 chrV:441849-442581 5.46e-02 100 chrXII:374193-374561 1.47e-10 33_[-1(8.05e-08)]_8_[+2(8.81e-09)]_\ 10 chrXVI:821908-822220 2.49e-01 100 chrX:617751-617851 1.07e-06 36_[-1(3.33e-10)]_44 chrXII:281968-282125 3.47e-02 42_[-1(6.77e-05)]_38 chrXII:489285-489589 2.88e-02 9_[-1(3.45e-05)]_71 chrII:377939-378161 3.12e-01 100 chrII:135942-136250 9.73e-01 100 chrXVI:829114-829415 8.99e-03 58_[+1(5.08e-06)]_22 chrXII:656849-657164 1.49e-07 24_[+1(1.43e-08)]_56 chrXII:710691-710819 6.28e-01 100 chrIII:138705-138992 3.36e-02 100 chrX:126441-126541 5.38e-01 100 chrXIII:861186-861408 4.17e-01 100 chrXV:730132-730522 1.12e-01 100 chrIV:1251720-1251957 1.29e-02 49_[+1(3.45e-06)]_31 chrXII:898225-898615 8.78e-01 100 chrIX:210505-210828 1.03e-06 54_[-1(5.90e-10)]_26 chrIV:915750-915862 8.61e-01 100 chrVIII:115014-115312 6.89e-01 100 chrX:663885-663985 7.88e-01 100 chrXI:82207-82597 2.57e-01 100 chrIII:82419-82666 2.30e-09 8_[+3(1.68e-13)]_62 chrXIV:6567-6829 1.41e-01 100 chrXV:620513-620879 1.56e-01 100 chrXII:646015-646405 9.69e-01 100 chrII:332391-332678 9.32e-01 100 chrIX:27-193 4.50e-01 100 chrVIII:451288-452732 3.37e-01 100 chrXII:820051-820441 7.37e-01 100 chrXI:517309-517529 9.69e-02 100 chrIV:1269935-1270325 1.89e-01 100 chrXII:263585-263874 3.31e-01 100 chrVII:648208-648307 5.39e-01 99 chrXVI:303226-303670 2.20e-01 100 chrXI:84050-84360 1.07e-06 58_[-1(1.68e-09)]_22 chrIII:177506-177826 2.46e-01 100 chrXIII:500144-500546 3.79e-01 100 chrVII:476077-476467 1.19e-01 100 chrXV:710042-710341 7.67e-01 100 chrV:407390-407780 4.82e-01 100 chrVII:878521-878973 4.14e-06 22_[-2(1.35e-09)]_49 chrIV:465165-465420 7.75e-01 100 chrV:304366-304537 2.47e-01 100 chrVIII:302328-302737 8.27e-01 100 chrXIV:68383-68761 7.73e-01 100 chrV:462539-462929 6.88e-01 100 chrXIII:290658-290958 3.29e-09 45_[-3(1.68e-13)]_25 chrX:622589-622689 8.67e-01 100 chrXVI:581879-582219 1.05e-05 68_[-1(3.74e-08)]_12 chrIV:411332-411561 1.62e-01 100 chrVIII:94657-94957 8.05e-01 100 chrIV:1269021-1269411 7.92e-01 100 chrXII:709169-709559 8.02e-01 100 chrXIV:23569-23959 7.75e-01 100 chrXVI:880169-880522 9.47e-15 10_[-2(6.32e-12)]_9_[+1(5.90e-10)]_\ 32 chrV:86402-86969 2.64e-02 100 chrVII:807208-807598 7.11e-01 100 chrVIII:55580-55705 4.35e-01 100 chrVI:225592-225982 4.54e-01 100 chrIV:155185-155575 1.67e-01 100 chrIV:308089-308295 2.78e-01 100 chrXII:921394-921784 1.83e-02 38_[-3(3.15e-05)]_32 chrVII:877432-877614 4.89e-01 100 chrXVI:744129-744482 1.20e-05 61_[+2(7.75e-09)]_10 chrVII:483220-483789 2.87e-03 4_[-3(2.50e-05)]_66 chrXV:925209-925439 5.19e-01 100 chrVII:478165-478315 3.13e-02 100 chrXII:448546-448877 5.34e-12 27_[+3(1.37e-14)]_43 chrXI:165148-165269 4.67e-01 100 chrXV:438508-438865 4.51e-13 12_[-1(3.34e-08)]_31_[+2(2.48e-10)]_\ 8 chrVII:328429-328818 2.85e-18 12_[-3(1.68e-13)]_[+2(1.29e-12)]_29 chrX:521059-521159 3.57e-01 100 chrXVI:769074-769483 1.59e-06 48_[+1(3.34e-08)]_32 chrXVI:124951-125341 1.36e-01 100 chrIV:914957-915118 5.31e-01 100 chrXIII:774370-774529 8.49e-02 100 chrXIII:334857-335262 5.27e-02 100 chrIV:721810-722137 8.77e-01 100 chrXII:827148-827263 1.57e-01 100 chrVII:148452-148842 8.28e-01 100 chrVI:223424-223636 2.97e-01 100 chrVII:405321-405697 4.54e-09 43_[+2(2.36e-12)]_28 chrVII:882519-883881 1.41e-01 100 chrIII:142633-142925 1.09e-03 24_[+1(2.82e-06)]_56 chrXVI:580387-580777 1.52e-01 100 chrXII:784200-784567 1.73e-07 26_[-1(1.05e-11)]_54 chrV:78884-79512 3.50e-01 100 chrXII:283079-283669 8.36e-01 100 chrXV:964474-964864 4.32e-01 100 chrVI:225131-225375 8.72e-01 100 chrVII:609746-610048 2.01e-01 100 chrXIII:162392-162739 1.92e-01 100 chrII:36243-36551 9.92e-05 56_[-1(9.91e-08)]_24 chrVIII:85226-85534 1.04e-03 15_[+1(2.17e-07)]_65 chrIV:768576-768760 3.22e-03 2_[+3(2.62e-05)]_68 chrIV:117231-117493 5.87e-01 100 chrXII:645803-646193 1.72e-01 100 chrXVI:248332-248722 7.77e-01 100 chrX:119268-119368 7.53e-01 100 chrXIV:501532-501709 2.18e-01 100 chrXVI:377687-378077 4.98e-01 100 chrXIII:259059-259392 1.35e-07 38_[+1(1.52e-11)]_42 chrV:267627-268017 5.23e-02 51_[+1(8.23e-05)]_29 chrXII:370380-371005 4.21e-01 100 chrXII:28-193 4.74e-01 100 chrXIII:224050-224440 7.86e-01 100 chrXIII:626109-626499 1.05e-01 100 chrVII:640931-641268 7.71e-01 100 chrIX:97300-97533 2.82e-01 100 chrVII:345471-345789 9.58e-01 100 chrXII:712413-712803 9.02e-01 100 chrX:119894-119994 9.83e-01 100 chrII:374202-374301 4.58e-01 99 chrVII:534853-535160 2.81e-01 100 chrXVI:689414-689808 5.58e-07 9_[-1(8.80e-11)]_71 chrIV:722424-722814 5.92e-02 100 chrXIII:5325-5770 7.22e-03 48_[+1(1.38e-06)]_32 chrXVI:701848-702083 8.08e-01 100 chrXVI:194071-194371 4.29e-01 100 chrXII:515712-515880 5.72e-01 100 chrIV:1489967-1490449 1.77e-01 100 chrX:541354-541454 2.54e-07 55_[-3(7.17e-11)]_15 chrXV:274493-274894 1.17e-07 35_[-1(1.05e-11)]_45 chrXVI:210093-210403 2.85e-18 3_[-2(1.29e-12)]_[+3(1.68e-13)]_38 chrXII:789788-790072 9.99e-01 100 chrVIII:381682-381967 6.35e-01 100 chrII:226932-227308 5.30e-08 10_[-1(1.52e-11)]_70 chrXIII:754476-754677 9.40e-01 100 chrXVI:810499-810830 1.34e-05 67_[-1(8.49e-09)]_13 chrXIV:443600-443990 8.82e-01 100 chrXII:806281-806715 2.98e-01 100 chrXVI:55912-56447 5.90e-06 49_[-2(1.35e-09)]_22 chrX:139264-139364 8.91e-01 100 chrXII:639425-639906 2.52e-01 100 chrIV:44144-44534 6.84e-01 100 chrXVI:856730-857071 3.67e-08 57_[-1(1.43e-08)]_23 chrVII:727766-728156 4.21e-01 100 chrIV:466122-466512 3.35e-01 100 chrXIV:716137-716400 5.06e-01 100 chrVI:157813-158157 1.04e-04 46_[+1(9.91e-08)]_34 chrXII:796484-796779 5.00e-01 100 chrXII:605169-605593 3.86e-06 75_[+1(6.26e-07)]_5 chrVIII:562321-562607 9.16e-03 41_[-1(1.38e-06)]_11_[-1(1.38e-06)]_\ 8 chrXIV:675764-676112 4.92e-01 100 chrXI:571207-571413 8.88e-01 100 chrVII:784243-784341 6.58e-01 98 chrVII:1050197-1050474 4.88e-01 100 chrV:424717-425107 6.41e-01 100 chrIX:45828-46257 7.53e-01 100 chrIV:1017100-1017442 1.49e-08 24_[+3(1.14e-12)]_46 chrVII:738979-739298 9.47e-15 39_[-1(5.90e-10)]_9_[+2(6.32e-12)]_\ 3 chrXII:280682-281072 1.17e-01 100 chrV:362805-363195 3.94e-02 13_[+3(4.37e-05)]_57 chrXV:464280-464640 6.01e-05 37_[-1(1.38e-06)]_43 chrVIII:35206-35786 7.12e-01 100 chrI:180979-181380 2.68e-04 17_[-1(2.97e-08)]_63 chrIII:209924-210314 1.30e-01 100 chrXI:109365-109755 5.23e-01 100 chrX:414821-414921 6.34e-15 40_[-1(3.74e-08)]_8_[+2(2.93e-13)]_\ 3 chrXII:628225-628609 3.14e-04 21_[-1(2.97e-08)]_59 chrVIII:34566-35184 5.95e-01 100 chrXIII:552942-553237 8.24e-01 100 chrXIV:102555-102858 5.65e-05 65_[-1(8.49e-09)]_15 chrIII:62853-63243 1.22e-01 100 chrXV:92277-92387 6.99e-01 100 chrIV:217129-217519 4.64e-01 100 chrXII:372545-372935 7.27e-01 100 chrIII:262659-263049 5.07e-01 100 chrXV:218882-219067 9.19e-01 100 chrV:68929-69477 1.50e-03 16_[-1(3.02e-06)]_64 chrXV:487294-487632 2.10e-10 31_[-1(8.49e-09)]_9_[+2(2.53e-09)]_\ 11 chrXII:1019047-1019305 3.50e-01 100 chrIV:340507-340897 1.42e-01 100 chrXIV:351918-352418 7.53e-01 100 chrIII:163451-163840 1.21e-01 100 chrX:90119-90219 8.88e-01 100 chrV:135258-135669 6.34e-15 21_[-2(2.93e-13)]_8_[+1(3.74e-08)]_\ 22 chrXIII:777297-777619 9.63e-01 100 chrV:61269-61463 8.51e-01 100 chrXII:592411-592771 3.76e-07 52_[+1(3.33e-10)]_28 chrXVI:900038-900428 8.58e-01 100 chrVIII:105004-105394 9.60e-01 100 chrXII:824622-825012 1.08e-01 100 chrII:88154-88486 9.39e-01 100 chrV:302850-303240 3.44e-01 100 chrIV:52-284 4.40e-04 2_[+1(1.38e-06)]_78 chrVIII:475571-475912 2.37e-13 24_[-2(6.36e-09)]_1_[+3(4.72e-11)]_\ 16 chrVII:516288-516617 1.37e-01 100 chrXV:1073043-1073496 1.98e-01 100 chrVIII:146115-146486 3.07e-13 1_[-2(1.15e-09)]_8_[+1(1.43e-08)]_\ 42 chrV:67150-67540 4.39e-01 100 chrXIII:279974-280106 8.17e-01 100 chrXI:99799-99955 4.63e-01 100 chrXII:5452-5852 7.12e-03 66_[+1(1.38e-06)]_14 chrVII:857282-857639 3.22e-04 55_[+1(2.97e-08)]_25 chrXV:883086-883476 1.77e-01 100 chrXVI:193004-193567 9.65e-01 100 chrXIII:768272-768604 1.99e-07 27_[+1(1.43e-08)]_53 chrXIV:230511-230636 3.81e-02 48_[-3(9.97e-05)]_22 chrIX:300133-300451 1.05e-05 32_[+1(3.74e-08)]_48 chrX:703314-703414 8.89e-01 100 chrX:181855-181955 5.54e-01 100 chrXIII:168641-169019 1.54e-08 20_[-1(4.77e-06)]_24_[+2(1.35e-09)]_\ 7 chrXIV:349003-349393 8.97e-02 100 chrXV:978772-979130 2.95e-01 100 chrXI:143881-144271 2.18e-01 100 chrXV:93653-94043 7.36e-01 100 chrV:176939-177367 2.07e-08 28_[+2(1.29e-12)]_43 chrVIII:388794-389156 9.89e-06 52_[+1(2.17e-07)]_28 chrX:227846-227946 7.68e-01 100 chrIV:392532-392922 7.81e-01 100 chrXIII:220808-221197 7.71e-01 100 chrXII:713214-713515 5.13e-01 100 chrIV:1466961-1467351 9.17e-01 100 chrVI:162084-162377 1.51e-03 45_[-1(4.20e-06)]_35 chrV:443115-443440 2.04e-06 22_[+1(5.90e-10)]_58 chrIV:130078-130258 9.46e-01 100 chrX:390950-391050 8.95e-03 21_[+1(9.77e-06)]_59 chrIV:306686-306844 7.72e-01 100 chrXIII:732095-732322 9.58e-01 100 chrIX:127671-128113 3.68e-01 100 chrVII:786157-786547 1.82e-02 16_[+1(4.20e-06)]_64 chrXI:382915-383305 6.74e-01 100 chrI:139001-139319 6.56e-05 39_[-1(1.72e-06)]_41 chrXI:74465-74782 9.55e-07 56_[-1(8.49e-09)]_24 chrXV:623982-624221 8.64e-01 100 chrV:491108-491495 9.08e-01 100 chrII:45037-45353 7.35e-01 100 chrXV:897315-897705 8.45e-02 100 chrIV:234437-234827 3.34e-01 100 chrXI:567155-567476 1.98e-01 100 chrV:85137-85431 2.17e-01 100 chrV:130992-131311 2.04e-09 19_[+3(1.78e-12)]_51 chrX:374349-374449 4.54e-09 16_[-2(2.36e-12)]_55 chrVIII:466812-467137 4.18e-01 100 chrXV:962178-962568 4.22e-01 100 chrVII:799349-799739 9.31e-01 100 chrXIII:223118-223508 6.12e-01 100 chrXIII:297442-298839 9.43e-01 100 chrX:123361-123461 9.96e-01 100 chrIX:174860-175240 2.74e-12 36_[-1(1.42e-09)]_8_[+2(2.04e-10)]_\ 7 chrVIII:62594-62918 6.28e-07 51_[-3(4.37e-11)]_19 chrV:69853-70243 7.47e-01 100 chrXII:547135-547525 7.72e-01 100 chrIII:168206-168550 1.96e-11 11_[+3(1.37e-14)]_59 chrXV:980540-980887 7.70e-05 17_[-1(2.17e-07)]_63 chrIV:1401336-1401521 8.58e-01 100 chrXVI:280619-281324 7.29e-01 100 chrVII:856803-856914 9.66e-02 100 chrV:139299-139424 8.57e-01 100 chrVII:441301-441518 4.90e-01 100 chrXIII:551408-551750 9.20e-01 100 chrXIV:253847-254237 4.01e-01 100 chrVIII:386132-386526 9.52e-01 100 chrX:95594-95694 5.42e-02 100 chrX:73824-73924 3.40e-01 100 chrXIII:123715-124105 4.81e-01 100 chrX:523923-524023 1.25e-07 21_[+1(1.52e-11)]_59 chrXV:168046-168355 7.05e-01 100 chrIV:842001-842401 8.64e-01 100 chrXII:837814-839294 2.99e-01 100 chrXI:490818-491117 3.13e-05 56_[-1(8.05e-08)]_24 chrVII:371153-371543 6.24e-01 100 chrXII:11061-11487 8.45e-03 47_[+1(1.38e-06)]_33 chrI:71936-73318 2.23e-01 100 chrII:311513-311900 3.09e-01 100 chrXII:951355-951612 2.52e-02 22_[+1(1.95e-05)]_37_[+1(6.77e-05)]_\ 1 chrXI:114762-115175 4.42e-01 100 chrXIV:234277-234667 2.32e-01 100 chrII:89001-89391 9.95e-01 100 chrXII:348486-348876 7.74e-01 100 chrXII:202231-202507 6.40e-01 100 chrXV:110826-111201 6.54e-15 8_[-2(2.04e-10)]_[+3(1.02e-11)]_33 chrXII:232179-234101 9.86e-01 100 chrXVI:132684-133074 6.54e-01 100 chrVII:851153-851543 3.53e-02 100 chrXV:962386-962776 3.03e-01 100 chrXIV:24627-25017 9.96e-01 100 chrXIII:504721-505111 2.91e-04 34_[-1(2.97e-08)]_46 chrXII:834579-834969 1.68e-01 100 chrX:415853-415953 9.27e-02 45_[+2(6.51e-05)]_26 chrXIII:667711-668101 6.26e-01 100 chrVII:850574-850785 2.49e-01 100 chrVIII:237759-238086 1.03e-04 41_[+1(9.91e-08)]_39 chrXIII:652277-652840 7.01e-01 100 chrIX:214204-214594 5.03e-01 100 chrXII:241709-241936 8.02e-01 100 chrVII:667785-668103 5.98e-02 100 chrX:391749-391849 2.45e-01 100 chrV:354763-355179 2.85e-18 15_[-3(1.68e-13)]_[+2(1.29e-12)]_26 chrV:423141-423428 6.47e-01 100 chrXIV:62123-62259 2.00e-01 100 chrVIII:115965-116335 2.74e-12 16_[-2(2.04e-10)]_8_[+1(1.42e-09)]_\ 27 chrVI:75553-75943 6.74e-02 100 chrIV:359419-359799 1.59e-06 23_[-1(3.34e-08)]_57 chrXI:258622-258958 3.70e-01 100 chrIII:227796-228199 8.44e-07 [-1(8.80e-11)]_80 chrXII:97197-97587 7.46e-01 100 chrX:293040-293140 1.41e-01 100 chrV:334926-335316 4.38e-01 100 chrXII:809274-809624 7.43e-02 37_[+1(8.55e-05)]_43 chrXIV:663723-664079 3.82e-01 100 chrXII:1029262-1029652 8.65e-01 100 chrVII:876250-876565 6.34e-15 42_[-1(3.74e-08)]_8_[+2(2.93e-13)]_\ 1 chrXV:903800-904300 5.85e-01 100 chrXII:515830-516220 7.69e-03 7_[+2(4.61e-05)]_64 chrVII:561529-561908 9.24e-08 49_[+1(1.52e-11)]_31 chrVII:422930-423379 1.38e-01 100 chrV:431044-431533 1.81e-01 100 chrXI:520087-520583 3.07e-01 100 chrVII:436882-437382 6.34e-01 100 chrXVI:73342-73732 8.86e-01 100 chrXIII:352108-352502 6.47e-05 30_[-1(9.91e-08)]_50 chrVIII:132950-133278 7.36e-08 17_[+1(1.52e-11)]_63 chrXII:794230-794724 8.00e-01 100 chrVIII:556697-557246 4.79e-01 100 chrVIII:382109-382316 7.64e-01 100 chrXV:113666-113933 4.25e-06 58_[-1(1.42e-09)]_22 chrIV:1305475-1305815 2.89e-07 40_[-1(1.52e-11)]_40 chrXVI:17413-17800 5.38e-01 100 chrVIII:51248-51638 2.95e-02 69_[+1(3.30e-05)]_11 chrV:140536-140836 2.53e-01 100 chrXII:837580-837881 6.51e-02 100 chrIV:1418655-1419045 2.01e-01 100 chrXII:728215-728395 1.15e-01 100 chrXIV:602173-602497 9.47e-15 32_[-1(5.90e-10)]_9_[+2(6.32e-12)]_\ 10 chrXII:952874-953061 2.47e-01 100 chrIV:946129-946559 1.54e-08 23_[-1(4.77e-06)]_24_[+2(1.35e-09)]_\ 4 chrVII:364166-364556 6.74e-01 100 chrV:438553-438849 9.08e-04 54_[-1(2.17e-07)]_26 chrXIV:560576-560943 8.13e-06 30_[+1(1.42e-09)]_50 chrII:615358-615748 3.62e-03 57_[-3(2.20e-05)]_13 chrIX:232611-233024 7.06e-01 100 chrXIII:484296-484686 6.83e-01 100 chrXII:919587-919977 1.32e-01 100 chrXVI:405084-405567 9.65e-01 100 chrVI:191413-191765 1.17e-07 48_[+1(1.05e-11)]_32 chrXV:724113-724351 8.08e-01 100 chrVII:779473-779813 6.54e-15 25_[-3(1.02e-11)]_[+2(2.04e-10)]_16 chrIII:30-494 4.27e-03 13_[+1(9.39e-07)]_6_[+1(4.48e-06)]_\ 16_[+1(1.38e-06)]_5 chrXIV:490687-491077 9.72e-01 100 chrVII:183536-183926 3.92e-01 100 chrV:207204-207529 6.49e-07 43_[-3(4.37e-11)]_27 chrXVI:645825-646215 8.15e-01 100 chrVII:806448-806683 3.55e-01 100 chrVI:221821-222000 7.66e-01 100 chrXV:160254-160588 1.24e-02 39_[-1(1.22e-05)]_41 chrIII:123458-123801 6.44e-10 7_[-2(8.02e-11)]_15_[+1(2.14e-06)]_\ 29 chrXIV:499705-500779 1.69e-01 100 chrXVI:435801-436139 3.60e-01 100 chrVII:366172-366578 6.05e-01 100 chrXIII:67693-67871 2.34e-01 100 chrXV:594260-594585 2.94e-07 20_[+3(7.22e-10)]_50 chrIV:356262-356720 7.80e-01 100 chrVII:319619-320019 7.96e-12 14_[-3(4.37e-11)]_[+2(3.09e-08)]_27 chrXII:341295-341453 8.04e-01 100 chrXV:967178-967568 3.82e-01 100 chrXIV:87316-87767 6.23e-01 100 chrV:469310-469606 1.39e-03 54_[-1(2.17e-07)]_26 chrIX:99701-99934 2.40e-01 100 chrXI:514256-514403 2.15e-02 67_[+1(3.94e-05)]_13 chrVII:736163-736530 1.98e-01 100 chrIV:1465907-1466195 1.57e-01 100 chrIX:324207-324533 2.54e-07 21_[+3(7.17e-11)]_49 chrIV:1256934-1257236 8.47e-07 11_[+3(1.11e-09)]_59 chrXV:92984-93295 3.75e-02 1_[-2(4.25e-05)]_70 chrVII:788379-788672 2.15e-01 100 chrXIV:569793-570086 1.99e-06 25_[+1(5.90e-10)]_55 chrIV:1239495-1239645 1.53e-01 100 chrVIII:81054-81444 3.11e-01 100 chrIV:198752-199142 7.21e-01 100 chrIII:212968-213358 9.59e-01 100 chrVI:55523-55913 1.23e-01 100 chrVIII:488371-488530 1.05e-01 100 chrXII:540887-541277 2.20e-02 20_[-1(3.01e-05)]_60 chrXII:366079-366435 3.31e-01 100 chrXVI:281235-281523 7.29e-01 100 chrVIII:381939-382111 7.99e-01 100 chrI:109019-109409 5.68e-03 67_[-1(1.99e-06)]_13 chrXII:954269-954571 3.71e-01 100 chrII:266227-266567 2.74e-12 36_[-1(1.42e-09)]_8_[+2(2.04e-10)]_\ 7 chrIII:223660-224050 5.54e-01 100 chrXIII:379195-379571 9.95e-02 53_[+2(6.51e-05)]_18 chrIII:261951-262341 2.05e-01 100 chrXIV:722205-722595 1.38e-01 100 chrVII:531475-531752 8.62e-08 49_[-3(7.17e-11)]_21 chrXIV:506308-506698 3.25e-01 100 chrXII:201901-202263 3.53e-02 60_[-2(1.65e-05)]_11 chrXII:522684-523074 9.92e-01 100 chrVI:90617-90989 1.29e-01 100 chrII:428417-428541 1.46e-01 100 chrVII:555408-555625 7.83e-02 100 chrXV:479616-480006 5.64e-01 100 chrX:598300-598400 5.02e-01 100 chrXII:242872-243262 5.17e-02 53_[+1(2.37e-05)]_27 chrX:652104-652204 1.59e-01 100 chrVII:110510-110858 7.96e-12 [-2(3.09e-08)]_[+3(4.37e-11)]_41 chrXI:308057-308385 9.60e-04 20_[+1(2.17e-07)]_60 chrXVI:106265-106655 5.65e-01 100 chrXI:46229-46960 6.99e-01 100 chrXII:95547-95937 9.20e-01 100 chrVII:120931-121235 8.66e-01 100 chrIV:1360329-1360719 8.19e-01 100 chrV:434405-434784 7.96e-12 6_[-2(3.09e-08)]_[+3(4.37e-11)]_35 chrV:288352-288669 1.31e-06 38_[+1(8.80e-11)]_42 chrIV:1352387-1352676 1.05e-05 31_[+1(3.74e-08)]_49 chrVII:440573-440985 1.00e-04 52_[+1(9.91e-08)]_28 chrIV:44454-44606 2.19e-01 100 chrIV:386930-387192 2.48e-01 100 chrXVI:338769-339066 7.67e-01 100 chrXIV:63166-63469 7.39e-01 100 chrXIII:271483-271796 9.64e-01 100 chrVII:454471-454882 2.74e-01 100 chrXIII:159041-159393 4.20e-02 20_[-3(9.97e-05)]_50 chrVIII:504838-505135 7.37e-01 100 chrXI:382283-382451 2.24e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************