Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.013511 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.05685 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.071771 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.013874 Invoking: fasta-subsample /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/seqs-centered 600 -rest /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/seqs-discarded -seed 1 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/seqs-sampled Finished invoke: name: sample_seqs status: 0 time: 0.066051 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background Finished invoke: name: bg status: 0 time: 0.011045 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 956.22537 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/seqs-shuffled Finished invoke: name: dreme status: 0 time: 126.170404 Invoking: centrimo -seqlen 440 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.283009 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.43619 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background -primary SSCTYWAMCMACTNRGCCAH /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.605017 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background -primary RAGRTCMBSGGTTCGAYYCCS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.602279 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background -primary RRTGTAYGGGTGY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.561079 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background -primary GCCWTAAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.279418 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background -primary GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.256778 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background -primary CGCCASAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.301278 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background -primary ATCKTGAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.241492 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background -primary AGAARA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.49277 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background -primary CYTGCGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.302352 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background -primary CGTTGCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.313328 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background -primary ATGWGATA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.246894 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background -primary TGACCGMA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.232787 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background -primary ARTCATAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.257143 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background -primary GGGGWTCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.250583 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background -primary CKTTGGGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.283161 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/spamo_out_16 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background -primary GCATGSGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.242385 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/spamo_out_17 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background -primary GAAAHAAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml Finished invoke: name: spamo17 status: 0 time: 0.40543 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/spamo_out_18 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background -primary CGGTMTCC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml Finished invoke: name: spamo18 status: 0 time: 0.247737 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background --motif SSCTYWAMCMACTNRGCCAH /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa Finished invoke: name: fimo1 status: 0 time: 0.238401 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background --motif RAGRTCMBSGGTTCGAYYCCS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa Finished invoke: name: fimo2 status: 0 time: 0.241049 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background --motif RRTGTAYGGGTGY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa Finished invoke: name: fimo3 status: 0 time: 0.234739 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background --motif GCCWTAAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa Finished invoke: name: fimo4 status: 0 time: 0.142143 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background --motif GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa Finished invoke: name: fimo5 status: 0 time: 0.141622 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background --motif CGCCASAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa Finished invoke: name: fimo6 status: 0 time: 0.141883 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background --motif ATCKTGAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa Finished invoke: name: fimo7 status: 0 time: 0.140385 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background --motif AGAARA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa Finished invoke: name: fimo8 status: 0 time: 0.123879 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background --motif CYTGCGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa Finished invoke: name: fimo9 status: 0 time: 0.140689 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background --motif CGTTGCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa Finished invoke: name: fimo10 status: 0 time: 0.140661 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background --motif ATGWGATA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa Finished invoke: name: fimo11 status: 0 time: 0.14386 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background --motif TGACCGMA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa Finished invoke: name: fimo12 status: 0 time: 0.140212 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background --motif ARTCATAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa Finished invoke: name: fimo13 status: 0 time: 0.140892 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background --motif GGGGWTCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa Finished invoke: name: fimo14 status: 0 time: 0.141698 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background --motif CKTTGGGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa Finished invoke: name: fimo15 status: 0 time: 0.140942 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/fimo_out_16 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background --motif GCATGSGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa Finished invoke: name: fimo16 status: 0 time: 0.141529 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/fimo_out_17 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background --motif GAAAHAAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa Finished invoke: name: fimo17 status: 0 time: 0.145807 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/fimo_out_18 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/background --motif CGGTMTCC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/BY4742--HAA1.fa Finished invoke: name: fimo18 status: 0 time: 0.140677 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--HAA1/summary.tsv Finished invoke: name: summary status: 0 time: 0.172843 Done