******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--CUP9/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrXVI:731900-732315 1.0000 100 chrXV:520592-520970 1.0000 100 chrXI:141782-142212 1.0000 100 chrVIII:175025-175406 1.0000 100 chrXV:109514-110072 1.0000 100 chrXII:796398-796877 1.0000 100 chrVI:191364-191795 1.0000 100 chrIV:1270139-1270569 1.0000 100 chrIII:1022-1271 1.0000 100 chrXIII:195909-196368 1.0000 100 chrXVI:210051-210447 1.0000 100 chrIV:1080500-1080890 1.0000 100 chrX:415811-415911 1.0000 100 chrV:423088-423485 1.0000 100 chrVII:56785-57215 1.0000 100 chrXIV:241381-241742 1.0000 100 chrVII:27-233 1.0000 100 chrXIV:442816-443302 1.0000 100 chrV:78242-78448 1.0000 100 chrIV:1401252-1401619 1.0000 100 chrXV:832374-832705 1.0000 100 chrIV:645012-645413 1.0000 100 chrIV:1359383-1359828 1.0000 100 chrXV:161720-162015 1.0000 100 chrXVI:407335-407765 1.0000 100 chrVII:700478-701231 1.0000 100 chrVII:148082-148512 1.0000 100 chrXVI:821841-822283 1.0000 100 chrV:438518-438915 1.0000 100 chrXII:712336-712766 1.0000 100 chrVII:479207-482825 1.0000 100 chrX:197187-197287 1.0000 100 chrIII:294476-294906 1.0000 100 chrIV:49-384 1.0000 100 chrXIII:362858-363296 1.0000 100 chrXII:499056-499667 1.0000 100 chrXII:1028219-1028588 1.0000 100 chrV:362791-363221 1.0000 100 chrIV:1461561-1462021 1.0000 100 chrX:349000-349100 1.0000 100 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1.0000 100 chrII:9396-9792 1.0000 100 chrXV:901423-901664 1.0000 100 chrX:374236-374336 1.0000 100 chrXV:443819-444055 1.0000 100 chrVIII:386350-386780 1.0000 100 chrVII:856695-857018 1.0000 100 chrIX:325559-326008 1.0000 100 chrXII:498507-498877 1.0000 100 chrVII:648247-648362 1.0000 100 chrIV:1201558-1202013 1.0000 100 chrIX:98597-99027 1.0000 100 chrXII:232102-234064 1.0000 100 chrIII:299072-299300 1.0000 100 chrXII:5414-5952 1.0000 100 chrXIII:372301-372701 1.0000 100 chrV:135209-135693 1.0000 100 chrVIII:531524-531802 1.0000 100 chrXIII:550105-550293 1.0000 100 chrXIII:915032-915462 1.0000 100 chrXVI:407127-407557 1.0000 100 chrXII:263609-264039 1.0000 100 chrII:415495-415873 1.0000 100 chrX:172838-172938 1.0000 100 chrVII:365146-365475 1.0000 100 chrIV:358087-358427 1.0000 100 chrIII:295283-295743 1.0000 100 chrIV:1305444-1305871 1.0000 100 chrXIV:493894-494324 1.0000 100 chrV:288277-288704 1.0000 100 chrIV:619810-620224 1.0000 100 chrX:75335-75435 1.0000 100 chrVII:328395-328939 1.0000 100 chrIII:138786-138898 1.0000 100 chrIX:183289-183703 1.0000 100 chrXII:1064817-1065385 1.0000 100 chrII:350648-351000 1.0000 100 chrVII:959289-959719 1.0000 100 chrXII:731901-732306 1.0000 100 chrIV:1238169-1238375 1.0000 100 chrIII:292615-293045 1.0000 100 chrXIV:174330-174593 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--CUP9/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--CUP9/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--CUP9/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 561 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 56100 N= 561 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.287 C 0.213 G 0.213 T 0.287 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--CUP9/background): A 0.304 C 0.196 G 0.196 T 0.304 ******************************************************************************** ******************************************************************************** MOTIF AAYCDKRAGRTCMBSGGTTCGAYYCCSV MEME-1 width = 28 sites = 88 llr = 1735 E-value = 5.6e-377 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAYCDKRAGRTCMBSGGTTCGAYYCCSV MEME-1 Description -------------------------------------------------------------------------------- Simplified A 78::3257242:4:12::::3a2::::3 pos.-specific C 213711::1::8533::::a::25a753 probability G 1123354376::1357a:::7:2:::43 matrix T 115:231:1:82:41::aa:::45:31: bits 2.4 * * * 2.1 * * * 1.9 * * * 1.6 **** * * Relative 1.4 * * ****** * Entropy 1.2 * * * ******* * (28.4 bits) 0.9 * ** * ******* **** 0.7 * * ***** ******** **** 0.5 **** ******** ******** ***** 0.2 **** ***************** ***** 0.0 ---------------------------- Multilevel AATCGGAAGGTCCTGGGTTCGATTCCCC consensus CGATGG AATACCA A CC TGG sequence T G A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAYCDKRAGRTCMBSGGTTCGAYYCCSV MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------------- chrIX:183289-183703 - 3 1.62e-12 CCGTGCTAAT AACGCGGGGATCAGCGGTTCGATCCCGC TA chrVII:738935-739363 + 60 1.62e-12 CCGTGCTAAT AACGCGGGGATCAGCGGTTCGATCCCGC TAGAGACCAT chrXIV:569744-570100 - 4 1.62e-12 CCGTGCTAAT AACGCGGGGATCAGCGGTTCGATCCCGC TAG chrIV:667824-668287 - 11 1.62e-12 CCGTGCTAAT AACGCGGGGATCAGCGGTTCGATCCCGC TAGAGACCAT chrXIV:602144-602518 + 68 1.62e-12 CCGTGCTAAT AACGCGGGGATCAGCGGTTCGATCCCGC TAGAG chrV:135209-135693 - 33 2.27e-12 TATGACTCTT AATCATAAGGTTAGGGGTTCGAGCCCCC TACAGGGCTT chrIV:1201558-1202013 + 51 2.27e-12 TATGACTCTT AATCATAAGGTTAGGGGTTCGAGCCCCC TACAGGGCTA chrX:374236-374336 - 64 2.27e-12 CTGACTTCT AATCAGAAGATTATGGGTTCGACCCCCA TCGTGAGTGC chrV:138479-138942 + 41 2.27e-12 TCTGACTTCT AATCAGAAGATTATGGGTTCGACCCCCA TCGTGAGTGT chrXVI:581871-582302 + 62 2.27e-12 TATGACTCTT AATCATAAGGTTAGGGGTTCGAGCCCCC TACAGGGCTT chrVII:185558-185956 - 16 2.27e-12 TATGACTCTT AATCATAAGGTTAGGGGTTCGAGCCCCC TACAGGGCTA chrIV:568706-569161 + 34 2.27e-12 TCTGACTTCT AATCAGAAGATTATGGGTTCGACCCCCA TCGTGAGTGC chrVII:122091-122513 + 53 2.27e-12 TATGACTCTT AATCATAAGGTTAGGGGTTCGAGCCCCC TACAGGGCTA chrVII:828493-828981 - 45 2.27e-12 TCTGACTTCT AATCAGAAGATTATGGGTTCGACCCCCA TCGTGAGTGC chrXIII:480469-480873 - 9 2.27e-12 TATGACTCTT AATCATAAGGTTAGGGGTTCGAGCCCCC TACAGGGC chrXI:162277-162734 - 41 2.27e-12 TCTGACTTCT AATCAGAAGATTATGGGTTCGACCCCCA TCGTGAGTGT chrVII:736145-736584 + 61 2.27e-12 TCTGACTTCT AATCAGAAGATTATGGGTTCGACCCCCA TCGTGAGTGT chrVII:405282-405742 + 43 2.27e-12 TCTGACTTCT AATCAGAAGATTATGGGTTCGACCCCCA TCGTGAGTGC chrXV:854025-854456 - 6 6.94e-12 CTTCCCTTGC AAGGAAGAGGTCATCGGTTCGATTCCGG TTGCG chrV:311844-312279 - 21 6.94e-12 CTTCCCTTGC AAGGAAGAGGTCATCGGTTCGATTCCGG TTGCGTCCAA chrI:166064-166546 + 48 6.94e-12 CTTCCCTTGC AAGGAAGAGGTCATCGGTTCGATTCCGG TTGCGTCCAA chrIII:123404-123823 - 23 1.26e-11 CTCGCTTAGG GTGCGGGAGGTCCCGGGTTCGAGTCCCG GCTCGCCCCA chrVII:328395-328939 + 1 2.21e-11 . CACCGTGGAGACCGGGGTTCGACTCCCC GTATCGGAGT chrV:176901-177383 + 42 2.21e-11 ATCACGCTTT CACCGTGGAGACCGGGGTTCGACTCCCC GTATCGGAGT chrIV:1017009-1017468 - 28 2.21e-11 ATCACGTTCT CACCGTGGAGACCGGGGTTCGACTCCCC GCTTCGGAGT chrXIII:290622-291008 + 71 2.21e-11 ATCACGCTTT CACCGTGGAGACCGGGGTTCGACTCCCC GT chrVII:541644-542159 + 34 2.21e-11 ATCACGCTTT CACCGTGGAGACCGGGGTTCGACTCCCC GTATCGGAGT chrXI:140822-141261 - 36 2.21e-11 ATCACGCTTT CACCGTGGAGACCGGGGTTCGACTCCCC GTATCGGAGT chrII:644983-645393 + 64 2.21e-11 ATCACGCTTT CACCGTGGAGACCGGGGTTCGACTCCCC GTATCGGAG chrXVI:210051-210447 - 2 2.21e-11 ATCACGCTTT CACCGTGGAGACCGGGGTTCGACTCCCC G chrIII:295283-295743 + 57 1.04e-10 CCACACTAGT AATGTGGAGATCATCGGTTCAAATCCGA TTGGAAGCAT chrIX:325559-326008 + 51 1.04e-10 CCACACTAGT AATGTGGAGATCATCGGTTCAAATCCGA TTGGAAGCAA chrVIII:115941-116366 - 13 1.04e-10 CCACACTAGT AATGTGGAGATCATCGGTTCAAATCCGA TTGGAAGCAT chrXIV:560538-560955 - 6 1.04e-10 CCACACTAGT AATGTGGAGATCATCGGTTCAAATCCGA TTGGA chrXIV:104619-105080 + 42 1.04e-10 CCACACTAGT AATGTGGAGATCATCGGTTCAAATCCGA TTGGAAGCAT chrIV:434022-434527 - 49 1.04e-10 CCACACTAGT AATGTGGAGATCATCGGTTCAAATCCGA TTGGAAGCAT chrXV:353871-354299 - 15 1.04e-10 CCACACTAGT AATGTGGAGATCATCGGTTCAAATCCGA TTGGAAGCAT chrXV:438462-438925 + 59 1.68e-10 TAAGCAAGGA TACCGAAATGTCAGGGGTTCGAGCCCCC TATGAGGAGT chrVII:115308-115758 + 64 1.68e-10 TAAGCAAGGA TACCGAAATGTCAGGGGTTCGAGCCCCC TATGAGGAG chrXI:578780-579257 + 56 1.68e-10 TAAGCAAGGA TACCGAAATGTCAGGGGTTCGAGCCCCC TATGAGGAGT chrIV:83372-83767 + 63 1.89e-10 CCAACGTTGC CATCGTTGGGCCCCCGGTTCGATTCCGG GCTTGCGCAA chrVI:180722-181233 - 56 1.89e-10 CCAACGTTGC CATCGTTGGGCCCCCGGTTCGATTCCGG GCTTGCGCAG chrVII:845452-845907 + 54 1.89e-10 CCAACGTTGC CATCGTTGGGCCCCCGGTTCGATTCCGG GCTTGCGCAA chrIV:1075323-1075731 - 4 2.37e-10 TTGCCTTCAC ACGGCAAAGGTCCCGAGTTCGATCCTCG GTT chrX:422752-422852 + 50 2.65e-10 TCAGTCTCAT AATCTGAAGGTCGAGAGTTCGAACCTCC CCTGGAGCAC chrXIII:572739-573137 - 4 2.65e-10 TCAGTCTCAT AATCTGAAGGTCGAGAGTTCGAACCTCC CCT chrXV:976226-976672 + 58 2.65e-10 TCAGTCTCAT AATCTGAAGGTCGAGAGTTCGAACCTCC CCTGGAGCAA chrIV:1175634-1176070 + 63 2.65e-10 TCAGTCTCAT AATCTGAAGGTCGAGAGTTCGAACCTCC CCTGGAGCAT chrXIII:372301-372701 - 3 3.30e-10 TCTGCTTAAC ACGCAGAACGTCCCCAGTTCGATCCTGG GC chrXII:687659-688119 - 29 3.30e-10 TCTGCTTAAC ACGCAGAACGTCCCCAGTTCGATCCTGG GCGAAATCAT chrVII:412126-412554 - 13 3.30e-10 TCTGCTTAAC ACGCAGAACGTCCCCAGTTCGATCCTGG GCGAAATCAA chrXIII:420418-420843 - 17 3.30e-10 TCTGCTTAAC ACGCAGAACGTCCCCAGTTCGATCCTGG GCGAAATCAT chrII:326628-327051 - 12 3.30e-10 TCGCCTTTAC ACGGCGAAGATCCCGAGTTCGAACCTCG GTTGGATCAA chrXV:663651-664066 - 13 3.30e-10 TCTGCTTAAC ACGCAGAACGTCCCCAGTTCGATCCTGG GCGAAATCGT chrV:438518-438915 + 71 3.30e-10 TCTGCTTAAC ACGCAGAACGTCCCCAGTTCGATCCTGG GC chrVII:774168-774632 + 35 8.47e-10 CTCCCTTAGC ATGGGAGAGGTCTCCGGTTCGATTCCGG ACTCGTCCAA chrXII:92362-92851 + 58 8.47e-10 AAGACAAAGC ATGCGAGAGGCCCTGGGTTCAATTCCCA GCTCGCCCCT chrVIII:146066-146500 - 18 8.47e-10 CTCCCTTAGC ATGGGAGAGGTCTCCGGTTCGATTCCGG ACTCGTCCAA chrIV:410200-410590 + 70 8.47e-10 CTCCCTTAGC ATGGGAGAGGTCTCCGGTTCGATTCCGG ACT chrVII:730955-731375 + 59 9.36e-10 TGCGACTGTT AATCGCAAGATCGTGAGTTCAACCCTCA CTGGGGTCGT chrXV:487255-487674 + 62 9.36e-10 TGCGACTGTT AATCGCAAGATCGTGAGTTCAACCCTCA CTGGGGTCGT chrXII:975840-976218 - 13 9.36e-10 TGCGACTGTT AATCGCAAGATCGTGAGTTCAACCCTCA CTGGGGTCGT chrXIV:632415-632844 + 57 9.36e-10 TGCGACTGTT AATCGCAAGATCGTGAGTTCAACCCTCA CTGGGGTCGT chrVI:137277-137738 - 38 9.36e-10 TGCGACTGTT AATCGCAAGATCGTGAGTTCAACCCTCA CTGGGGTCGT chrXV:110783-111220 - 20 1.26e-09 CCCACCCTTC CAAGGTGGGGACACGGGTTCGATTCTCG TACCGCTCAT chrXIV:96034-96531 - 18 1.26e-09 CCCACCCTTC CAAGGTGGGGACACGGGTTCGATTCTCG TACCGCTCAA chrIV:619810-620224 - 11 2.42e-09 TCTGGCTACG AACCAGAAGATTCCAGGTTCAAGTCCTG GCGGGGAAGA chrXV:340134-340547 - 18 2.42e-09 TCTGGCTACG AACCAGAAGATTCCAGGTTCAAGTCCTG GCGGGGAAGA chrXII:374167-374616 + 50 2.42e-09 TCTGGCTACG AACCAGAAGATTCCAGGTTCAAGTCCTG GCGGGGAAGA chrXI:490782-491185 + 71 2.42e-09 TCTGGCTACG AACCAGAAGATTCCAGGTTCAAGTCCTG GC chrV:492202-492612 - 4 2.42e-09 TCTGGCTACG AACCAGAAGATTCCAGGTTCAAGTCCTG GCG chrVII:440495-441003 - 26 2.64e-09 TCGGTCAAGT TATCTGGAGGTCCTGTGTTCGATCCACA GAATTCGCAT chrXVI:560027-560483 - 2 2.64e-09 TCGGTCAAGT TATCTGGAGGTCCTGTGTTCGATCCACA G chrIV:1095176-1095634 - 24 2.64e-09 TTGGTCAAGA TATCTGGAGGTCCTGTGTTCGATCCACA GAGTTCGCAT chrXIII:808100-808507 - 2 2.89e-09 TTTCGGTTCT GATCCGAACAACCCCAGTTCGAATCCGG G chrIV:946112-946623 + 47 1.17e-08 ATCACTACGA AATCTTGAGATCGGGCGTTCGACTCGCC CCCGGGAGAT chrVII:1004044-1004428 + 65 1.27e-08 TTGCACTTGT AATGCAAAGGTCGTTAGTTCAATTCTGA CAGGTGGC chrXVI:744094-744505 + 70 1.27e-08 TTGCACTTGT AATGCAAAGGTCGTTAGTTCAATTCTGA CAG chrVII:706942-707384 - 4 1.47e-08 GCAGATTGCA AATCTGTTGGTCCTTAGTTCGATCCTGA GTG chrX:517680-517780 - 6 4.18e-08 CAGGGCTCAT AACCCTGATGTCCTCGGATCGAAACCGA GCGGC chrV:99931-100363 + 71 4.18e-08 CAGGGCTCAT AACCCTGATGTCCTCGGATCGAAACCGA GC chrX:204542-204642 + 62 9.31e-08 GGGCGCTTGT CGCGTGCCAGATCGGGGTTCAATTCCCC GTCGCGGAGA chrXIII:463370-463843 + 33 9.31e-08 GGGCGCTTGT CGCGTGCCAGATCGGGGTTCAATTCCCC GTCGCGGAGA chrVII:544375-544845 - 26 9.31e-08 GGGCGCTTGT CGCGTGCCAGATCGGGGTTCAATTCCCC GTCGCGGAGA chrXI:313236-313650 - 17 2.71e-07 ACATCGTTGT GGCCGATGAAACCCTGGTTCGATTCTAG GAGATGGCAT chrV:207157-207596 + 66 2.71e-07 ACATCGTTGT GGCCGATGAAACCCTGGTTCGATTCTAG GAGATGG chrV:434366-434801 - 17 2.71e-07 ACATCGTTGT GGCCGATGAAACCCTGGTTCGATTCTAG GAGATGGCAT chrXIII:362858-363296 + 72 2.71e-07 ACATCGTTGT GGCCGATGAAACCCTGGTTCGATTCTAG G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAYCDKRAGRTCMBSGGTTCGAYYCCSV MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIX:183289-183703 1.6e-12 2_[-1]_70 chrVII:738935-739363 1.6e-12 59_[+1]_13 chrXIV:569744-570100 1.6e-12 3_[-1]_69 chrIV:667824-668287 1.6e-12 10_[-1]_62 chrXIV:602144-602518 1.6e-12 67_[+1]_5 chrV:135209-135693 2.3e-12 32_[-1]_40 chrIV:1201558-1202013 2.3e-12 50_[+1]_22 chrX:374236-374336 2.3e-12 63_[-1]_9 chrV:138479-138942 2.3e-12 40_[+1]_32 chrXVI:581871-582302 2.3e-12 61_[+1]_11 chrVII:185558-185956 2.3e-12 15_[-1]_57 chrIV:568706-569161 2.3e-12 33_[+1]_39 chrVII:122091-122513 2.3e-12 52_[+1]_20 chrVII:828493-828981 2.3e-12 44_[-1]_28 chrXIII:480469-480873 2.3e-12 8_[-1]_64 chrXI:162277-162734 2.3e-12 40_[-1]_32 chrVII:736145-736584 2.3e-12 60_[+1]_12 chrVII:405282-405742 2.3e-12 42_[+1]_30 chrXV:854025-854456 6.9e-12 5_[-1]_67 chrV:311844-312279 6.9e-12 20_[-1]_52 chrI:166064-166546 6.9e-12 47_[+1]_25 chrIII:123404-123823 1.3e-11 22_[-1]_50 chrVII:328395-328939 2.2e-11 [+1]_72 chrV:176901-177383 2.2e-11 41_[+1]_31 chrIV:1017009-1017468 2.2e-11 27_[-1]_45 chrXIII:290622-291008 2.2e-11 70_[+1]_2 chrVII:541644-542159 2.2e-11 33_[+1]_39 chrXI:140822-141261 2.2e-11 35_[-1]_37 chrII:644983-645393 2.2e-11 63_[+1]_9 chrXVI:210051-210447 2.2e-11 1_[-1]_71 chrIII:295283-295743 1e-10 56_[+1]_16 chrIX:325559-326008 1e-10 50_[+1]_22 chrVIII:115941-116366 1e-10 12_[-1]_60 chrXIV:560538-560955 1e-10 5_[-1]_67 chrXIV:104619-105080 1e-10 41_[+1]_31 chrIV:434022-434527 1e-10 48_[-1]_24 chrXV:353871-354299 1e-10 14_[-1]_58 chrXV:438462-438925 1.7e-10 58_[+1]_14 chrVII:115308-115758 1.7e-10 63_[+1]_9 chrXI:578780-579257 1.7e-10 55_[+1]_17 chrIV:83372-83767 1.9e-10 62_[+1]_10 chrVI:180722-181233 1.9e-10 55_[-1]_17 chrVII:845452-845907 1.9e-10 53_[+1]_19 chrIV:1075323-1075731 2.4e-10 3_[-1]_69 chrX:422752-422852 2.6e-10 49_[+1]_23 chrXIII:572739-573137 2.6e-10 3_[-1]_69 chrXV:976226-976672 2.6e-10 57_[+1]_15 chrIV:1175634-1176070 2.6e-10 62_[+1]_10 chrXIII:372301-372701 3.3e-10 2_[-1]_70 chrXII:687659-688119 3.3e-10 28_[-1]_44 chrVII:412126-412554 3.3e-10 12_[-1]_60 chrXIII:420418-420843 3.3e-10 16_[-1]_56 chrII:326628-327051 3.3e-10 11_[-1]_61 chrXV:663651-664066 3.3e-10 12_[-1]_60 chrV:438518-438915 3.3e-10 70_[+1]_2 chrVII:774168-774632 8.5e-10 34_[+1]_38 chrXII:92362-92851 8.5e-10 57_[+1]_15 chrVIII:146066-146500 8.5e-10 17_[-1]_55 chrIV:410200-410590 8.5e-10 69_[+1]_3 chrVII:730955-731375 9.4e-10 58_[+1]_14 chrXV:487255-487674 9.4e-10 61_[+1]_11 chrXII:975840-976218 9.4e-10 12_[-1]_60 chrXIV:632415-632844 9.4e-10 56_[+1]_16 chrVI:137277-137738 9.4e-10 37_[-1]_35 chrXV:110783-111220 1.3e-09 19_[-1]_53 chrXIV:96034-96531 1.3e-09 17_[-1]_55 chrIV:619810-620224 2.4e-09 10_[-1]_62 chrXV:340134-340547 2.4e-09 17_[-1]_55 chrXII:374167-374616 2.4e-09 49_[+1]_23 chrXI:490782-491185 2.4e-09 70_[+1]_2 chrV:492202-492612 2.4e-09 3_[-1]_69 chrVII:440495-441003 2.6e-09 25_[-1]_47 chrXVI:560027-560483 2.6e-09 1_[-1]_71 chrIV:1095176-1095634 2.6e-09 23_[-1]_49 chrXIII:808100-808507 2.9e-09 1_[-1]_71 chrIV:946112-946623 1.2e-08 46_[+1]_26 chrVII:1004044-1004428 1.3e-08 64_[+1]_8 chrXVI:744094-744505 1.3e-08 69_[+1]_3 chrVII:706942-707384 1.5e-08 3_[-1]_69 chrX:517680-517780 4.2e-08 5_[-1]_67 chrV:99931-100363 4.2e-08 70_[+1]_2 chrX:204542-204642 9.3e-08 61_[+1]_11 chrXIII:463370-463843 9.3e-08 32_[+1]_40 chrVII:544375-544845 9.3e-08 25_[-1]_47 chrXI:313236-313650 2.7e-07 16_[-1]_56 chrV:207157-207596 2.7e-07 65_[+1]_7 chrV:434366-434801 2.7e-07 16_[-1]_56 chrXIII:362858-363296 2.7e-07 71_[+1]_1 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAYCDKRAGRTCMBSGGTTCGAYYCCSV MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAYCDKRAGRTCMBSGGTTCGAYYCCSV width=28 seqs=88 chrIX:183289-183703 ( 3) AACGCGGGGATCAGCGGTTCGATCCCGC 1 chrVII:738935-739363 ( 60) AACGCGGGGATCAGCGGTTCGATCCCGC 1 chrXIV:569744-570100 ( 4) AACGCGGGGATCAGCGGTTCGATCCCGC 1 chrIV:667824-668287 ( 11) AACGCGGGGATCAGCGGTTCGATCCCGC 1 chrXIV:602144-602518 ( 68) AACGCGGGGATCAGCGGTTCGATCCCGC 1 chrV:135209-135693 ( 33) AATCATAAGGTTAGGGGTTCGAGCCCCC 1 chrIV:1201558-1202013 ( 51) AATCATAAGGTTAGGGGTTCGAGCCCCC 1 chrX:374236-374336 ( 64) AATCAGAAGATTATGGGTTCGACCCCCA 1 chrV:138479-138942 ( 41) AATCAGAAGATTATGGGTTCGACCCCCA 1 chrXVI:581871-582302 ( 62) AATCATAAGGTTAGGGGTTCGAGCCCCC 1 chrVII:185558-185956 ( 16) AATCATAAGGTTAGGGGTTCGAGCCCCC 1 chrIV:568706-569161 ( 34) AATCAGAAGATTATGGGTTCGACCCCCA 1 chrVII:122091-122513 ( 53) AATCATAAGGTTAGGGGTTCGAGCCCCC 1 chrVII:828493-828981 ( 45) AATCAGAAGATTATGGGTTCGACCCCCA 1 chrXIII:480469-480873 ( 9) AATCATAAGGTTAGGGGTTCGAGCCCCC 1 chrXI:162277-162734 ( 41) AATCAGAAGATTATGGGTTCGACCCCCA 1 chrVII:736145-736584 ( 61) AATCAGAAGATTATGGGTTCGACCCCCA 1 chrVII:405282-405742 ( 43) AATCAGAAGATTATGGGTTCGACCCCCA 1 chrXV:854025-854456 ( 6) AAGGAAGAGGTCATCGGTTCGATTCCGG 1 chrV:311844-312279 ( 21) AAGGAAGAGGTCATCGGTTCGATTCCGG 1 chrI:166064-166546 ( 48) AAGGAAGAGGTCATCGGTTCGATTCCGG 1 chrIII:123404-123823 ( 23) GTGCGGGAGGTCCCGGGTTCGAGTCCCG 1 chrVII:328395-328939 ( 1) CACCGTGGAGACCGGGGTTCGACTCCCC 1 chrV:176901-177383 ( 42) CACCGTGGAGACCGGGGTTCGACTCCCC 1 chrIV:1017009-1017468 ( 28) CACCGTGGAGACCGGGGTTCGACTCCCC 1 chrXIII:290622-291008 ( 71) CACCGTGGAGACCGGGGTTCGACTCCCC 1 chrVII:541644-542159 ( 34) CACCGTGGAGACCGGGGTTCGACTCCCC 1 chrXI:140822-141261 ( 36) CACCGTGGAGACCGGGGTTCGACTCCCC 1 chrII:644983-645393 ( 64) CACCGTGGAGACCGGGGTTCGACTCCCC 1 chrXVI:210051-210447 ( 2) CACCGTGGAGACCGGGGTTCGACTCCCC 1 chrIII:295283-295743 ( 57) AATGTGGAGATCATCGGTTCAAATCCGA 1 chrIX:325559-326008 ( 51) AATGTGGAGATCATCGGTTCAAATCCGA 1 chrVIII:115941-116366 ( 13) AATGTGGAGATCATCGGTTCAAATCCGA 1 chrXIV:560538-560955 ( 6) AATGTGGAGATCATCGGTTCAAATCCGA 1 chrXIV:104619-105080 ( 42) AATGTGGAGATCATCGGTTCAAATCCGA 1 chrIV:434022-434527 ( 49) AATGTGGAGATCATCGGTTCAAATCCGA 1 chrXV:353871-354299 ( 15) AATGTGGAGATCATCGGTTCAAATCCGA 1 chrXV:438462-438925 ( 59) TACCGAAATGTCAGGGGTTCGAGCCCCC 1 chrVII:115308-115758 ( 64) TACCGAAATGTCAGGGGTTCGAGCCCCC 1 chrXI:578780-579257 ( 56) TACCGAAATGTCAGGGGTTCGAGCCCCC 1 chrIV:83372-83767 ( 63) CATCGTTGGGCCCCCGGTTCGATTCCGG 1 chrVI:180722-181233 ( 56) CATCGTTGGGCCCCCGGTTCGATTCCGG 1 chrVII:845452-845907 ( 54) CATCGTTGGGCCCCCGGTTCGATTCCGG 1 chrIV:1075323-1075731 ( 4) ACGGCAAAGGTCCCGAGTTCGATCCTCG 1 chrX:422752-422852 ( 50) AATCTGAAGGTCGAGAGTTCGAACCTCC 1 chrXIII:572739-573137 ( 4) AATCTGAAGGTCGAGAGTTCGAACCTCC 1 chrXV:976226-976672 ( 58) AATCTGAAGGTCGAGAGTTCGAACCTCC 1 chrIV:1175634-1176070 ( 63) AATCTGAAGGTCGAGAGTTCGAACCTCC 1 chrXIII:372301-372701 ( 3) ACGCAGAACGTCCCCAGTTCGATCCTGG 1 chrXII:687659-688119 ( 29) ACGCAGAACGTCCCCAGTTCGATCCTGG 1 chrVII:412126-412554 ( 13) ACGCAGAACGTCCCCAGTTCGATCCTGG 1 chrXIII:420418-420843 ( 17) ACGCAGAACGTCCCCAGTTCGATCCTGG 1 chrII:326628-327051 ( 12) ACGGCGAAGATCCCGAGTTCGAACCTCG 1 chrXV:663651-664066 ( 13) ACGCAGAACGTCCCCAGTTCGATCCTGG 1 chrV:438518-438915 ( 71) ACGCAGAACGTCCCCAGTTCGATCCTGG 1 chrVII:774168-774632 ( 35) ATGGGAGAGGTCTCCGGTTCGATTCCGG 1 chrXII:92362-92851 ( 58) ATGCGAGAGGCCCTGGGTTCAATTCCCA 1 chrVIII:146066-146500 ( 18) ATGGGAGAGGTCTCCGGTTCGATTCCGG 1 chrIV:410200-410590 ( 70) ATGGGAGAGGTCTCCGGTTCGATTCCGG 1 chrVII:730955-731375 ( 59) AATCGCAAGATCGTGAGTTCAACCCTCA 1 chrXV:487255-487674 ( 62) AATCGCAAGATCGTGAGTTCAACCCTCA 1 chrXII:975840-976218 ( 13) AATCGCAAGATCGTGAGTTCAACCCTCA 1 chrXIV:632415-632844 ( 57) AATCGCAAGATCGTGAGTTCAACCCTCA 1 chrVI:137277-137738 ( 38) AATCGCAAGATCGTGAGTTCAACCCTCA 1 chrXV:110783-111220 ( 20) CAAGGTGGGGACACGGGTTCGATTCTCG 1 chrXIV:96034-96531 ( 18) CAAGGTGGGGACACGGGTTCGATTCTCG 1 chrIV:619810-620224 ( 11) AACCAGAAGATTCCAGGTTCAAGTCCTG 1 chrXV:340134-340547 ( 18) AACCAGAAGATTCCAGGTTCAAGTCCTG 1 chrXII:374167-374616 ( 50) AACCAGAAGATTCCAGGTTCAAGTCCTG 1 chrXI:490782-491185 ( 71) AACCAGAAGATTCCAGGTTCAAGTCCTG 1 chrV:492202-492612 ( 4) AACCAGAAGATTCCAGGTTCAAGTCCTG 1 chrVII:440495-441003 ( 26) TATCTGGAGGTCCTGTGTTCGATCCACA 1 chrXVI:560027-560483 ( 2) TATCTGGAGGTCCTGTGTTCGATCCACA 1 chrIV:1095176-1095634 ( 24) TATCTGGAGGTCCTGTGTTCGATCCACA 1 chrXIII:808100-808507 ( 2) GATCCGAACAACCCCAGTTCGAATCCGG 1 chrIV:946112-946623 ( 47) AATCTTGAGATCGGGCGTTCGACTCGCC 1 chrVII:1004044-1004428 ( 65) AATGCAAAGGTCGTTAGTTCAATTCTGA 1 chrXVI:744094-744505 ( 70) AATGCAAAGGTCGTTAGTTCAATTCTGA 1 chrVII:706942-707384 ( 4) AATCTGTTGGTCCTTAGTTCGATCCTGA 1 chrX:517680-517780 ( 6) AACCCTGATGTCCTCGGATCGAAACCGA 1 chrV:99931-100363 ( 71) AACCCTGATGTCCTCGGATCGAAACCGA 1 chrX:204542-204642 ( 62) CGCGTGCCAGATCGGGGTTCAATTCCCC 1 chrXIII:463370-463843 ( 33) CGCGTGCCAGATCGGGGTTCAATTCCCC 1 chrVII:544375-544845 ( 26) CGCGTGCCAGATCGGGGTTCAATTCCCC 1 chrXI:313236-313650 ( 17) GGCCGATGAAACCCTGGTTCGATTCTAG 1 chrV:207157-207596 ( 66) GGCCGATGAAACCCTGGTTCGATTCTAG 1 chrV:434366-434801 ( 17) GGCCGATGAAACCCTGGTTCGATTCTAG 1 chrXIII:362858-363296 ( 72) GGCCGATGAAACCCTGGTTCGATTCTAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAYCDKRAGRTCMBSGGTTCGAYYCCSV MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 28 n= 40953 bayes= 10.7359 E= 5.6e-377 116 -11 -152 -216 134 -111 -130 -242 -374 80 -11 58 -1310 182 65 -1310 1 -52 80 -50 -66 -178 135 -28 61 -252 106 -174 121 -252 35 -474 -84 -130 182 -242 43 -1310 159 -1310 -57 -211 -1310 130 -1310 196 -1310 -35 30 122 -52 -316 -274 65 59 21 -242 80 142 -194 -35 -410 187 -316 -1310 -1310 235 -1310 -374 -1310 -1310 168 -1310 -1310 -1310 172 -1310 235 -1310 -1310 -22 -1310 192 -1310 172 -1310 -1310 -1310 -84 29 -20 47 -374 129 -1310 72 -1310 235 -1310 -1310 -316 175 -410 -4 -274 142 94 -242 6 80 80 -1310 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAYCDKRAGRTCMBSGGTTCGAYYCCSV MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 28 nsites= 88 E= 5.6e-377 0.681818 0.181818 0.068182 0.068182 0.772727 0.090909 0.079545 0.056818 0.022727 0.340909 0.181818 0.454545 0.000000 0.693182 0.306818 0.000000 0.306818 0.136364 0.340909 0.215909 0.193182 0.056818 0.500000 0.250000 0.465909 0.034091 0.409091 0.090909 0.704545 0.034091 0.250000 0.011364 0.170455 0.079545 0.693182 0.056818 0.409091 0.000000 0.590909 0.000000 0.204545 0.045455 0.000000 0.750000 0.000000 0.761364 0.000000 0.238636 0.375000 0.454545 0.136364 0.034091 0.045455 0.306818 0.295455 0.352273 0.056818 0.340909 0.522727 0.079545 0.238636 0.011364 0.715909 0.034091 0.000000 0.000000 1.000000 0.000000 0.022727 0.000000 0.000000 0.977273 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.261364 0.000000 0.738636 0.000000 1.000000 0.000000 0.000000 0.000000 0.170455 0.238636 0.170455 0.420455 0.022727 0.477273 0.000000 0.500000 0.000000 1.000000 0.000000 0.000000 0.034091 0.659091 0.011364 0.295455 0.045455 0.522727 0.375000 0.056818 0.318182 0.340909 0.340909 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAYCDKRAGRTCMBSGGTTCGAYYCCSV MEME-1 regular expression -------------------------------------------------------------------------------- AA[TC][CG][GAT][GT][AG][AG]G[GA][TA][CT][CA][TCG][GC][GA]GTTC[GA]A[TC][TC]C[CT][CG][CGA] -------------------------------------------------------------------------------- Time 309.84 secs. ******************************************************************************** ******************************************************************************** MOTIF GGCCNAGTBGGTWAAGSSVYC MEME-2 width = 21 sites = 105 llr = 1608 E-value = 4.4e-290 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGCCNAGTBGGTWAAGSSVYC MEME-2 Description -------------------------------------------------------------------------------- Simplified A 1:::2a1:::::5651::312 pos.-specific C ::873::13::2:12:55335 probability G 8a:22:9:3a71:32945312 matrix T ::212::94:37511:::152 bits 2.4 2.1 * * * 1.9 * * * 1.6 ** ** * * Relative 1.4 *** *** * * Entropy 1.2 *** *** ** * * (22.1 bits) 0.9 **** *** ** *** 0.7 **** *** **** *** 0.5 **** ********* *** 0.2 **** **************** 0.0 --------------------- Multilevel GGCCCAGTTGGTAAAGCGATC consensus G C TCTGG GCCC sequence A G G T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCNAGTBGGTWAAGSSVYC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrIX:183289-183703 - 39 1.52e-11 CTGGTCTCTT GGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrXII:734626-735002 + 46 1.52e-11 TTGGTCTCTT GGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrVII:738935-739363 + 31 1.52e-11 TAGGTCTCTT GGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrXIV:569744-570100 - 40 1.52e-11 GTGGTCTCTT GGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrIX:210470-210886 + 45 1.52e-11 CTGGTCTCTT GGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrIV:667824-668287 - 47 1.52e-11 TTGGTCTCTT GGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrXIV:602144-602518 + 39 1.52e-11 ATGGTCTCTT GGCCCAGTTGGTTAAGGCACC GTGCTAATAA chrXII:731901-732306 + 45 2.41e-10 ATGGGAGTTT GGCCGAGTGGTTTAAGGCGTC AGATTTAGGT chrXII:592367-592807 - 54 2.41e-10 ATGGGAGTTT GGCCGAGTGGTTTAAGGCGTC AGATTTAGGT chrX:617727-617827 + 38 2.41e-10 ATGGGAGTTT GGCCGAGTGGTTTAAGGCGTC AGATTTAGGT chrIII:295283-295743 + 29 6.19e-10 AAGCTTCTAT GGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrIX:325559-326008 + 23 6.19e-10 GAGCTTCTAT GGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrVIII:115941-116366 - 48 6.19e-10 GAGCTTCTAT GGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrIII:127534-127905 + 55 6.19e-10 ATGACTCCAT GGCCAAGTTGGTTAAGGCGTG CGACTGTTAA chrXIV:560538-560955 - 41 6.19e-10 GGGCTTCTAT GGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrXV:228140-228551 + 44 6.19e-10 TAGACTCCAT GGCCAAGTTGGTTAAGGCGTG CGACTGTTAA chrVII:730955-731375 + 30 6.19e-10 AAGACTCCAT GGCCAAGTTGGTTAAGGCGTG CGACTGTTAA chrXVI:810456-810862 + 75 6.19e-10 GCGACTCCAT GGCCAAGTTGGTTAAGGCGTG CGACT chrXV:487255-487674 + 33 6.19e-10 TAGACTCCAT GGCCAAGTTGGTTAAGGCGTG CGACTGTTAA chrXIV:102526-102895 + 64 6.19e-10 AAGACTCCAT GGCCAAGTTGGTTAAGGCGTG CGACTGTTAA chrXIV:104619-105080 + 14 6.19e-10 GAGCTTCTAT GGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrXII:975840-976218 - 49 6.19e-10 AAGACTCCAT GGCCAAGTTGGTTAAGGCGTG CGACTGTTAA chrXIV:632415-632844 + 28 6.19e-10 GTGACTCCAT GGCCAAGTTGGTTAAGGCGTG CGACTGTTAA chrXV:353871-354299 - 50 6.19e-10 CTGCTTCTAT GGCCAAGTTGGTAAGGCGCCA CACTAGTAAT chrVI:137277-137738 - 74 6.19e-10 CTCCAT GGCCAAGTTGGTTAAGGCGTG CGACTGTTAA chrXII:656806-657185 - 33 1.64e-09 TTGGGCGTGT GGCGTAGTCGGTAGCGCGCTC CCTTAGCATG chrVII:774168-774632 + 7 1.64e-09 GCGTGT GGCGTAGTCGGTAGCGCGCTC CCTTAGCATG chrXI:517796-518156 + 70 1.64e-09 ATGGGCGTGT GGCGTAGTCGGTAGCGCGCTC CCTTAGCATG chrXVI:856711-857115 + 47 1.64e-09 TCGGGCGTGT GGCGTAGTCGGTAGCGCGCTC CCTTAGCATG chrVIII:146066-146500 - 53 1.64e-09 CAGGGCGTGT GGCGTAGTCGGTAGCGCGCTC CCTTAGCATG chrIV:410200-410590 + 42 1.64e-09 TTGGGCGTGT GGCGTAGTCGGTAGCGCGCTC CCTTAGCATG chrX:197187-197287 - 27 1.64e-09 TAGGGCGTGT GGCGTAGTCGGTAGCGCGCTC CCTTAGCATG chrXII:784161-784587 + 38 2.20e-09 CCGTCCCAGT GGCCGAGTGGTTAAGGCGATG CCTGCTATTT chrXV:274479-274930 + 27 2.20e-09 GTGTCCCAGT GGCCGAGTGGTTAAGGCGATG CCCTGCTATT chrIV:1150665-1151125 - 68 2.20e-09 CAGTCCCAGT GGCCGAGTGGTTAAGGCGATG CCTGCTATTT chrVI:191364-191795 - 56 2.20e-09 CTGTCCCAGT GGCCGAGTGGTTAAGGCGATG CCCTGCTATT chrV:288277-288704 - 56 2.93e-09 TAGGCACTAT GGCCGAGTGGTTAAGGCGACA GACTTGAAAT chrXVI:689379-689852 + 8 2.93e-09 GCACTAT GGCCGAGTGGTTAAGGCGACA GACTTGAAAT chrII:9396-9792 + 47 3.88e-09 GTGGAGGGTT GGCCGAGTGGTCTAAGGCGGC AGACTTAAGA chrXI:84013-84410 + 55 3.88e-09 ATGGAGGGTT GGCCGAGTGGTCTAAGGCGGC AGACTTAAGA chrIV:519559-519933 + 55 3.88e-09 ACGGAGGGTT GGCCGAGTGGTCTAAGGCGGC AGACTTAAGA chrX:424299-424399 - 34 3.88e-09 ATGGAGGGTT GGCCGAGTGGTCTAAGGCGGC AGACTTAAGA chrXIV:726028-726415 - 18 3.88e-09 TTGGAGGGTT GGCCGAGTGGTCTAAGGCGGC AGACTTAAGA chrXII:214769-215142 - 22 4.44e-09 TAGGGCACAT GGCGCAGTTGGTAGCGCGCTT CCCTTGCAAG chrXV:854025-854456 - 41 4.44e-09 CAGGGCACAT GGCGCAGTTGGTAGCGCGCTT CCCTTGCAAG chrV:311844-312279 - 56 4.44e-09 CTGGGCACAT GGCGCAGTTGGTAGCGCGCTT CCCTTGCAAG chrI:166064-166546 + 20 4.44e-09 TTGGGCACAT GGCGCAGTTGGTAGCGCGCTT CCCTTGCAAG chrVII:794246-794610 + 47 4.44e-09 GCGGGCACAT GGCGCAGTTGGTAGCGCGCTT CCCTTGCAAG chrVII:205339-205777 + 21 7.48e-09 GTGGTTGTTT GGCCGAGCGGTCTAAGGCGCC TGATTCAAGC chrVII:857243-857663 - 60 7.48e-09 GTGGTTGTTT GGCCGAGCGGTCTAAGGCGCC TGATTCAAGA chrXII:628192-628654 + 18 7.48e-09 GTGGTTGTTT GGCCGAGCGGTCTAAGGCGCC TGATTCAAGA chrIV:1461561-1462021 - 60 7.48e-09 GTGGTTGTTT GGCCGAGCGGTCTAAGGCGCC TGATTCAAGA chrXIV:442816-443302 + 5 7.48e-09 GTTT GGCCGAGCGGTCTAAGGCGCC TGATTCAAGA chrXIII:372301-372701 - 39 1.08e-08 CTGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrXII:687659-688119 - 65 1.08e-08 TAGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrVII:73727-74107 - 7 1.08e-08 GTGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTA chrV:469268-469666 + 48 1.08e-08 TTGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrX:378172-378272 + 44 1.08e-08 TAGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrVII:412126-412554 - 49 1.08e-08 CTGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrVII:823292-823688 + 50 1.08e-08 GTGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrXI:308007-308401 - 35 1.08e-08 GTGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrVIII:85183-85562 - 21 1.08e-08 TTGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrXIII:420418-420843 - 53 1.08e-08 CAGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrXI:379490-379899 + 44 1.08e-08 TAGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrXV:663651-664066 - 49 1.08e-08 GTGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrV:438518-438915 + 42 1.08e-08 TAGGTTTCGT GGTCTAGTCGGTTATGGCATC TGCTTAACAC chrIV:1305444-1305871 + 31 1.95e-08 AAGGCAACTT GGCCGAGTGGTTAAGGCGAAA GATTAGAAAT chrIV:980814-981237 - 52 1.95e-08 GAGGCAACTT GGCCGAGTGGTTAAGGCGAAA GATTAGAAAT chrI:182393-182811 - 23 1.95e-08 TTGGCAACTT GGCCGAGTGGTTAAGGCGAAA GATTAGAAAT chrXV:438462-438925 + 8 5.05e-08 CCTTGTT AGCTCAGTTGGTAGAGCGTTC GGCTTTTAAG chrVII:115308-115758 + 13 5.05e-08 CATCCTTGTT AGCTCAGTTGGTAGAGCGTTC GGCTTTTAAG chrXI:578780-579257 + 5 5.05e-08 TGTT AGCTCAGTTGGTAGAGCGTTC GGCTTTTAAG chrXII:875203-875621 + 22 5.05e-08 CATCCTTGTT AGCTCAGTTGGTAGAGCGTTC GGCTTTTAAG chrXVI:622378-622823 - 53 3.10e-07 ATGCGGATTT AGCTCAGTTGGGAGAGCGCCA GACTGAAGAA chrVI:157780-158195 - 42 3.10e-07 AAGCGGATTT AGCTCAGTTGGGAGAGCGCCA GACTGAAGAA chrVII:440495-441003 - 80 3.10e-07 . AGCTCAGTTGGGAGAGCGCCA GACTGAAGAA chrXVI:560027-560483 - 56 3.10e-07 GAGCGGATTT AGCTCAGTTGGGAGAGCGCCA GACTGAAGAA chrII:36203-36617 + 46 3.10e-07 AAGCGGATTT AGCTCAGTTGGGAGAGCGCCA GACTGAAGAA chrVIII:358334-358756 - 46 3.10e-07 AAGCGGATTT AGCTCAGTTGGGAGAGCGCCA GACTGAAGAA chrIV:1095176-1095634 - 78 3.10e-07 TT AGCTCAGTTGGGAGAGCGCCA GACTGAAGAA chrV:135209-135693 - 68 4.63e-07 AAGCCTTGTT GGCGCAATCGGTAGCGCGTAT GACTCTTAAT chrIV:1201558-1202013 + 23 4.63e-07 TAGCCTTGTT GGCGCAATCGGTAGCGCGTAT GACTCTTAAT chrXVI:581871-582302 + 34 4.63e-07 GAGCCTTGTT GGCGCAATCGGTAGCGCGTAT GACTCTTAAT chrVII:185558-185956 - 51 4.63e-07 TAGCCTTGTT GGCGCAATCGGTAGCGCGTAT GACTCTTAAT chrVII:122091-122513 + 25 4.63e-07 TAGCCTTGTT GGCGCAATCGGTAGCGCGTAT GACTCTTAAT chrXIII:480469-480873 - 44 4.63e-07 TAGCCTTGTT GGCGCAATCGGTAGCGCGTAT GACTCTTAAT chrIV:619810-620224 - 46 5.42e-07 TGTTCCTCGT GGCCCAATGGTCACGGCGTCT GGCTACGAAC chrXV:340134-340547 - 53 5.42e-07 TGTTCCTCGT GGCCCAATGGTCACGGCGTCT GGCTACGAAC chrXII:374167-374616 + 22 5.42e-07 TGTTCCTCGT GGCCCAATGGTCACGGCGTCT GGCTACGAAC chrXI:490782-491185 + 43 5.42e-07 TGTTCCTCGT GGCCCAATGGTCACGGCGTCT GGCTACGAAC chrV:492202-492612 - 39 5.42e-07 TATTCCTCGT GGCCCAATGGTCACGGCGTCT GGCTACGAAC chrII:326628-327051 - 48 8.51e-07 CGGGTCCAAT GGTCCAGTGGTTCAAGACGTC GCCTTTACAC chrX:542815-542915 - 43 1.06e-06 TACTCTCGGT AGCCAAGTTGGTTTAAGGCGC AAGACTGTAA chrX:354064-354164 + 34 1.06e-06 CACTCTCGGT AGCCAAGTTGGTTTAAGGCGC AAGACTGTAA chrXV:288012-288421 + 34 1.06e-06 TTCTCTCGGT AGCCAAGTTGGTTTAAGGCGC AAGACTGTAA chrIV:946112-946623 + 3 1.06e-06 GT AGCCAAGTTGGTTTAAGGCGC AAGACTGTAA chrI:142637-143174 - 14 3.11e-06 CTTAGCAGCT GGCTTAGCTGGCTTAGCAGCC TTCTTAGCGT chrXV:83177-83479 + 10 7.62e-06 AACGGCTAC GGCCGAATGGGCAAAGTAATT GCGGATTAAA chrV:99931-100363 + 22 1.06e-05 CATCCAGTTC TTTCAAGTTGGCTAAGCGCCG TGGCGCAGTG chrXV:161720-162015 + 44 3.09e-05 CCAGCGTTAT CGCCGGGCCGGCAAGAGCGCG GGTCCGCCAC chrXVI:576107-576349 + 49 3.24e-05 TACTCCTGAA GGTAGAGTCATCTAGGCGGAG ACGAAAACAA chrIV:1270139-1270569 + 61 3.39e-05 ATGTAAATTA GATCTAGTCGGCAAGAACGTT CTTATCGTTG chrXI:382156-382482 - 76 3.56e-05 AATG GGTGGAACGGTTACTGACGAC GGCCGCGCGG chrXV:903910-904603 + 75 3.73e-05 ATGCTAAACT GGTCACGCCGTTATAGACAGC AGTAA chrVII:56785-57215 + 42 7.23e-05 CGACGAGTCC GTCCAAGCTATCAAGGACATA ATGGTCACCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCNAGTBGGTWAAGSSVYC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIX:183289-183703 1.5e-11 38_[-2]_41 chrXII:734626-735002 1.5e-11 45_[+2]_34 chrVII:738935-739363 1.5e-11 30_[+2]_49 chrXIV:569744-570100 1.5e-11 39_[-2]_40 chrIX:210470-210886 1.5e-11 44_[+2]_35 chrIV:667824-668287 1.5e-11 46_[-2]_33 chrXIV:602144-602518 1.5e-11 38_[+2]_41 chrXII:731901-732306 2.4e-10 44_[+2]_35 chrXII:592367-592807 2.4e-10 53_[-2]_26 chrX:617727-617827 2.4e-10 37_[+2]_42 chrIII:295283-295743 6.2e-10 28_[+2]_51 chrIX:325559-326008 6.2e-10 22_[+2]_57 chrVIII:115941-116366 6.2e-10 47_[-2]_32 chrIII:127534-127905 6.2e-10 54_[+2]_25 chrXIV:560538-560955 6.2e-10 40_[-2]_39 chrXV:228140-228551 6.2e-10 43_[+2]_36 chrVII:730955-731375 6.2e-10 29_[+2]_50 chrXVI:810456-810862 6.2e-10 74_[+2]_5 chrXV:487255-487674 6.2e-10 32_[+2]_47 chrXIV:102526-102895 6.2e-10 63_[+2]_16 chrXIV:104619-105080 6.2e-10 13_[+2]_66 chrXII:975840-976218 6.2e-10 48_[-2]_31 chrXIV:632415-632844 6.2e-10 27_[+2]_52 chrXV:353871-354299 6.2e-10 49_[-2]_30 chrVI:137277-137738 6.2e-10 73_[-2]_6 chrXII:656806-657185 1.6e-09 32_[-2]_47 chrVII:774168-774632 1.6e-09 6_[+2]_73 chrXI:517796-518156 1.6e-09 69_[+2]_10 chrXVI:856711-857115 1.6e-09 46_[+2]_33 chrVIII:146066-146500 1.6e-09 52_[-2]_27 chrIV:410200-410590 1.6e-09 41_[+2]_38 chrX:197187-197287 1.6e-09 26_[-2]_53 chrXII:784161-784587 2.2e-09 37_[+2]_42 chrXV:274479-274930 2.2e-09 26_[+2]_53 chrIV:1150665-1151125 2.2e-09 67_[-2]_12 chrVI:191364-191795 2.2e-09 55_[-2]_24 chrV:288277-288704 2.9e-09 55_[-2]_24 chrXVI:689379-689852 2.9e-09 7_[+2]_72 chrII:9396-9792 3.9e-09 46_[+2]_33 chrXI:84013-84410 3.9e-09 54_[+2]_25 chrIV:519559-519933 3.9e-09 54_[+2]_25 chrX:424299-424399 3.9e-09 33_[-2]_46 chrXIV:726028-726415 3.9e-09 17_[-2]_62 chrXII:214769-215142 4.4e-09 21_[-2]_58 chrXV:854025-854456 4.4e-09 40_[-2]_39 chrV:311844-312279 4.4e-09 55_[-2]_24 chrI:166064-166546 4.4e-09 19_[+2]_60 chrVII:794246-794610 4.4e-09 46_[+2]_33 chrVII:205339-205777 7.5e-09 20_[+2]_59 chrVII:857243-857663 7.5e-09 59_[-2]_20 chrXII:628192-628654 7.5e-09 17_[+2]_62 chrIV:1461561-1462021 7.5e-09 59_[-2]_20 chrXIV:442816-443302 7.5e-09 4_[+2]_75 chrXIII:372301-372701 1.1e-08 38_[-2]_41 chrXII:687659-688119 1.1e-08 64_[-2]_15 chrVII:73727-74107 1.1e-08 6_[-2]_73 chrV:469268-469666 1.1e-08 47_[+2]_32 chrX:378172-378272 1.1e-08 43_[+2]_36 chrVII:412126-412554 1.1e-08 48_[-2]_31 chrVII:823292-823688 1.1e-08 49_[+2]_30 chrXI:308007-308401 1.1e-08 34_[-2]_45 chrVIII:85183-85562 1.1e-08 20_[-2]_59 chrXIII:420418-420843 1.1e-08 52_[-2]_27 chrXI:379490-379899 1.1e-08 43_[+2]_36 chrXV:663651-664066 1.1e-08 48_[-2]_31 chrV:438518-438915 1.1e-08 41_[+2]_38 chrIV:1305444-1305871 1.9e-08 30_[+2]_49 chrIV:980814-981237 1.9e-08 51_[-2]_28 chrI:182393-182811 1.9e-08 22_[-2]_57 chrXV:438462-438925 5.1e-08 7_[+2]_72 chrVII:115308-115758 5.1e-08 12_[+2]_67 chrXI:578780-579257 5.1e-08 4_[+2]_75 chrXII:875203-875621 5.1e-08 21_[+2]_58 chrXVI:622378-622823 3.1e-07 52_[-2]_27 chrVI:157780-158195 3.1e-07 41_[-2]_38 chrVII:440495-441003 3.1e-07 79_[-2] chrXVI:560027-560483 3.1e-07 55_[-2]_24 chrII:36203-36617 3.1e-07 45_[+2]_34 chrVIII:358334-358756 3.1e-07 45_[-2]_34 chrIV:1095176-1095634 3.1e-07 77_[-2]_2 chrV:135209-135693 4.6e-07 67_[-2]_12 chrIV:1201558-1202013 4.6e-07 22_[+2]_57 chrXVI:581871-582302 4.6e-07 33_[+2]_46 chrVII:185558-185956 4.6e-07 50_[-2]_29 chrVII:122091-122513 4.6e-07 24_[+2]_55 chrXIII:480469-480873 4.6e-07 43_[-2]_36 chrIV:619810-620224 5.4e-07 45_[-2]_34 chrXV:340134-340547 5.4e-07 52_[-2]_27 chrXII:374167-374616 5.4e-07 21_[+2]_58 chrXI:490782-491185 5.4e-07 42_[+2]_37 chrV:492202-492612 5.4e-07 38_[-2]_41 chrII:326628-327051 8.5e-07 47_[-2]_32 chrX:542815-542915 1.1e-06 42_[-2]_37 chrX:354064-354164 1.1e-06 33_[+2]_46 chrXV:288012-288421 1.1e-06 33_[+2]_46 chrIV:946112-946623 1.1e-06 2_[+2]_77 chrI:142637-143174 3.1e-06 13_[-2]_66 chrXV:83177-83479 7.6e-06 9_[+2]_70 chrV:99931-100363 1.1e-05 21_[+2]_58 chrXV:161720-162015 3.1e-05 43_[+2]_36 chrXVI:576107-576349 3.2e-05 48_[+2]_31 chrIV:1270139-1270569 3.4e-05 60_[+2]_19 chrXI:382156-382482 3.6e-05 75_[-2]_4 chrXV:903910-904603 3.7e-05 74_[+2]_5 chrVII:56785-57215 7.2e-05 41_[+2]_38 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCNAGTBGGTWAAGSSVYC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGCCNAGTBGGTWAAGSSVYC width=21 seqs=105 chrIX:183289-183703 ( 39) GGCCCAGTTGGTTAAGGCACC 1 chrXII:734626-735002 ( 46) GGCCCAGTTGGTTAAGGCACC 1 chrVII:738935-739363 ( 31) GGCCCAGTTGGTTAAGGCACC 1 chrXIV:569744-570100 ( 40) GGCCCAGTTGGTTAAGGCACC 1 chrIX:210470-210886 ( 45) GGCCCAGTTGGTTAAGGCACC 1 chrIV:667824-668287 ( 47) GGCCCAGTTGGTTAAGGCACC 1 chrXIV:602144-602518 ( 39) GGCCCAGTTGGTTAAGGCACC 1 chrXII:731901-732306 ( 45) GGCCGAGTGGTTTAAGGCGTC 1 chrXII:592367-592807 ( 54) GGCCGAGTGGTTTAAGGCGTC 1 chrX:617727-617827 ( 38) GGCCGAGTGGTTTAAGGCGTC 1 chrIII:295283-295743 ( 29) GGCCAAGTTGGTAAGGCGCCA 1 chrIX:325559-326008 ( 23) GGCCAAGTTGGTAAGGCGCCA 1 chrVIII:115941-116366 ( 48) GGCCAAGTTGGTAAGGCGCCA 1 chrIII:127534-127905 ( 55) GGCCAAGTTGGTTAAGGCGTG 1 chrXIV:560538-560955 ( 41) GGCCAAGTTGGTAAGGCGCCA 1 chrXV:228140-228551 ( 44) GGCCAAGTTGGTTAAGGCGTG 1 chrVII:730955-731375 ( 30) GGCCAAGTTGGTTAAGGCGTG 1 chrXVI:810456-810862 ( 75) GGCCAAGTTGGTTAAGGCGTG 1 chrXV:487255-487674 ( 33) GGCCAAGTTGGTTAAGGCGTG 1 chrXIV:102526-102895 ( 64) GGCCAAGTTGGTTAAGGCGTG 1 chrXIV:104619-105080 ( 14) GGCCAAGTTGGTAAGGCGCCA 1 chrXII:975840-976218 ( 49) GGCCAAGTTGGTTAAGGCGTG 1 chrXIV:632415-632844 ( 28) GGCCAAGTTGGTTAAGGCGTG 1 chrXV:353871-354299 ( 50) GGCCAAGTTGGTAAGGCGCCA 1 chrVI:137277-137738 ( 74) GGCCAAGTTGGTTAAGGCGTG 1 chrXII:656806-657185 ( 33) GGCGTAGTCGGTAGCGCGCTC 1 chrVII:774168-774632 ( 7) GGCGTAGTCGGTAGCGCGCTC 1 chrXI:517796-518156 ( 70) GGCGTAGTCGGTAGCGCGCTC 1 chrXVI:856711-857115 ( 47) GGCGTAGTCGGTAGCGCGCTC 1 chrVIII:146066-146500 ( 53) GGCGTAGTCGGTAGCGCGCTC 1 chrIV:410200-410590 ( 42) GGCGTAGTCGGTAGCGCGCTC 1 chrX:197187-197287 ( 27) GGCGTAGTCGGTAGCGCGCTC 1 chrXII:784161-784587 ( 38) GGCCGAGTGGTTAAGGCGATG 1 chrXV:274479-274930 ( 27) GGCCGAGTGGTTAAGGCGATG 1 chrIV:1150665-1151125 ( 68) GGCCGAGTGGTTAAGGCGATG 1 chrVI:191364-191795 ( 56) GGCCGAGTGGTTAAGGCGATG 1 chrV:288277-288704 ( 56) GGCCGAGTGGTTAAGGCGACA 1 chrXVI:689379-689852 ( 8) GGCCGAGTGGTTAAGGCGACA 1 chrII:9396-9792 ( 47) GGCCGAGTGGTCTAAGGCGGC 1 chrXI:84013-84410 ( 55) GGCCGAGTGGTCTAAGGCGGC 1 chrIV:519559-519933 ( 55) GGCCGAGTGGTCTAAGGCGGC 1 chrX:424299-424399 ( 34) GGCCGAGTGGTCTAAGGCGGC 1 chrXIV:726028-726415 ( 18) GGCCGAGTGGTCTAAGGCGGC 1 chrXII:214769-215142 ( 22) GGCGCAGTTGGTAGCGCGCTT 1 chrXV:854025-854456 ( 41) GGCGCAGTTGGTAGCGCGCTT 1 chrV:311844-312279 ( 56) GGCGCAGTTGGTAGCGCGCTT 1 chrI:166064-166546 ( 20) GGCGCAGTTGGTAGCGCGCTT 1 chrVII:794246-794610 ( 47) GGCGCAGTTGGTAGCGCGCTT 1 chrVII:205339-205777 ( 21) GGCCGAGCGGTCTAAGGCGCC 1 chrVII:857243-857663 ( 60) GGCCGAGCGGTCTAAGGCGCC 1 chrXII:628192-628654 ( 18) GGCCGAGCGGTCTAAGGCGCC 1 chrIV:1461561-1462021 ( 60) GGCCGAGCGGTCTAAGGCGCC 1 chrXIV:442816-443302 ( 5) GGCCGAGCGGTCTAAGGCGCC 1 chrXIII:372301-372701 ( 39) GGTCTAGTCGGTTATGGCATC 1 chrXII:687659-688119 ( 65) GGTCTAGTCGGTTATGGCATC 1 chrVII:73727-74107 ( 7) GGTCTAGTCGGTTATGGCATC 1 chrV:469268-469666 ( 48) GGTCTAGTCGGTTATGGCATC 1 chrX:378172-378272 ( 44) GGTCTAGTCGGTTATGGCATC 1 chrVII:412126-412554 ( 49) GGTCTAGTCGGTTATGGCATC 1 chrVII:823292-823688 ( 50) GGTCTAGTCGGTTATGGCATC 1 chrXI:308007-308401 ( 35) GGTCTAGTCGGTTATGGCATC 1 chrVIII:85183-85562 ( 21) GGTCTAGTCGGTTATGGCATC 1 chrXIII:420418-420843 ( 53) GGTCTAGTCGGTTATGGCATC 1 chrXI:379490-379899 ( 44) GGTCTAGTCGGTTATGGCATC 1 chrXV:663651-664066 ( 49) GGTCTAGTCGGTTATGGCATC 1 chrV:438518-438915 ( 42) GGTCTAGTCGGTTATGGCATC 1 chrIV:1305444-1305871 ( 31) GGCCGAGTGGTTAAGGCGAAA 1 chrIV:980814-981237 ( 52) GGCCGAGTGGTTAAGGCGAAA 1 chrI:182393-182811 ( 23) GGCCGAGTGGTTAAGGCGAAA 1 chrXV:438462-438925 ( 8) AGCTCAGTTGGTAGAGCGTTC 1 chrVII:115308-115758 ( 13) AGCTCAGTTGGTAGAGCGTTC 1 chrXI:578780-579257 ( 5) AGCTCAGTTGGTAGAGCGTTC 1 chrXII:875203-875621 ( 22) AGCTCAGTTGGTAGAGCGTTC 1 chrXVI:622378-622823 ( 53) AGCTCAGTTGGGAGAGCGCCA 1 chrVI:157780-158195 ( 42) AGCTCAGTTGGGAGAGCGCCA 1 chrVII:440495-441003 ( 80) AGCTCAGTTGGGAGAGCGCCA 1 chrXVI:560027-560483 ( 56) AGCTCAGTTGGGAGAGCGCCA 1 chrII:36203-36617 ( 46) AGCTCAGTTGGGAGAGCGCCA 1 chrVIII:358334-358756 ( 46) AGCTCAGTTGGGAGAGCGCCA 1 chrIV:1095176-1095634 ( 78) AGCTCAGTTGGGAGAGCGCCA 1 chrV:135209-135693 ( 68) GGCGCAATCGGTAGCGCGTAT 1 chrIV:1201558-1202013 ( 23) GGCGCAATCGGTAGCGCGTAT 1 chrXVI:581871-582302 ( 34) GGCGCAATCGGTAGCGCGTAT 1 chrVII:185558-185956 ( 51) GGCGCAATCGGTAGCGCGTAT 1 chrVII:122091-122513 ( 25) GGCGCAATCGGTAGCGCGTAT 1 chrXIII:480469-480873 ( 44) GGCGCAATCGGTAGCGCGTAT 1 chrIV:619810-620224 ( 46) GGCCCAATGGTCACGGCGTCT 1 chrXV:340134-340547 ( 53) GGCCCAATGGTCACGGCGTCT 1 chrXII:374167-374616 ( 22) GGCCCAATGGTCACGGCGTCT 1 chrXI:490782-491185 ( 43) GGCCCAATGGTCACGGCGTCT 1 chrV:492202-492612 ( 39) GGCCCAATGGTCACGGCGTCT 1 chrII:326628-327051 ( 48) GGTCCAGTGGTTCAAGACGTC 1 chrX:542815-542915 ( 43) AGCCAAGTTGGTTTAAGGCGC 1 chrX:354064-354164 ( 34) AGCCAAGTTGGTTTAAGGCGC 1 chrXV:288012-288421 ( 34) AGCCAAGTTGGTTTAAGGCGC 1 chrIV:946112-946623 ( 3) AGCCAAGTTGGTTTAAGGCGC 1 chrI:142637-143174 ( 14) GGCTTAGCTGGCTTAGCAGCC 1 chrXV:83177-83479 ( 10) GGCCGAATGGGCAAAGTAATT 1 chrV:99931-100363 ( 22) TTTCAAGTTGGCTAAGCGCCG 1 chrXV:161720-162015 ( 44) CGCCGGGCCGGCAAGAGCGCG 1 chrXVI:576107-576349 ( 49) GGTAGAGTCATCTAGGCGGAG 1 chrIV:1270139-1270569 ( 61) GATCTAGTCGGCAAGAACGTT 1 chrXI:382156-382482 ( 76) GGTGGAACGGTTACTGACGAC 1 chrXV:903910-904603 ( 75) GGTCACGCCGTTATAGACAGC 1 chrVII:56785-57215 ( 42) GTCCAAGCTATCAAGGACATA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCNAGTBGGTWAAGSSVYC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 44880 bayes= 10.6768 E= 4.4e-290 -109 -436 210 -499 -499 -1336 231 -400 -1336 207 -1336 -75 -499 183 -11 -141 -54 77 34 -54 169 -436 -436 -1336 -130 -1336 216 -1336 -1336 -104 -1336 157 -1336 55 55 49 -400 -1336 233 -1336 -1336 -1336 183 0 -1336 10 -155 125 78 -436 -1336 62 100 -178 50 -241 62 -19 22 -119 -241 -1336 227 -1336 -268 134 119 -499 -400 122 142 -1336 0 55 45 -109 -154 77 -104 62 -75 134 -36 -83 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCNAGTBGGTWAAGSSVYC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 105 E= 4.4e-290 0.142857 0.009524 0.838095 0.009524 0.009524 0.000000 0.971429 0.019048 0.000000 0.819048 0.000000 0.180952 0.009524 0.695238 0.180952 0.114286 0.209524 0.333333 0.247619 0.209524 0.980952 0.009524 0.009524 0.000000 0.123810 0.000000 0.876190 0.000000 0.000000 0.095238 0.000000 0.904762 0.000000 0.285714 0.285714 0.428571 0.019048 0.000000 0.980952 0.000000 0.000000 0.000000 0.695238 0.304762 0.000000 0.209524 0.066667 0.723810 0.523810 0.009524 0.000000 0.466667 0.609524 0.057143 0.276190 0.057143 0.466667 0.171429 0.228571 0.133333 0.057143 0.000000 0.942857 0.000000 0.047619 0.495238 0.447619 0.009524 0.019048 0.457143 0.523810 0.000000 0.304762 0.285714 0.266667 0.142857 0.104762 0.333333 0.095238 0.466667 0.180952 0.495238 0.152381 0.171429 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCCNAGTBGGTWAAGSSVYC MEME-2 regular expression -------------------------------------------------------------------------------- GGCC[CGAT]AGT[TCG]G[GT][TC][AT][AG][AG]G[CG][GC][ACG][TC]C -------------------------------------------------------------------------------- Time 589.53 secs. ******************************************************************************** ******************************************************************************** MOTIF RWRRTGTAYGGRTGT MEME-3 width = 15 sites = 135 llr = 1464 E-value = 1.1e-153 ******************************************************************************** -------------------------------------------------------------------------------- Motif RWRRTGTAYGGRTGT MEME-3 Description -------------------------------------------------------------------------------- Simplified A 5446::17:1:3::1 pos.-specific C 11::::214::::12 probability G 32542a:2:9a7:81 matrix T 132:8:7:6:::926 bits 2.4 * 2.1 * ** 1.9 * ** 1.6 * ** Relative 1.4 * ** * Entropy 1.2 ** ***** (15.6 bits) 0.9 *** ****** 0.7 *********** 0.5 ************* 0.2 * ************* 0.0 --------------- Multilevel AAGATGTATGGGTGT consensus GTAG C C A C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RWRRTGTAYGGRTGT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chrVIII:382895-383343 + 30 7.32e-09 ATTTATTTTC ATGATGTATGGGTGT ATCGGATGTT chrX:157420-157520 + 34 3.15e-08 ATGGATGTAT AAAGTGTACGGGTGT AAACACATTG chrXI:431339-431685 - 32 5.42e-08 AGATGTAAAA ATAGTGTATGGGTGT ATTTGCGCTG chrXVI:404562-404851 - 50 5.42e-08 TTTTTTTAGA ATGATGCATGGGTGT GCAGCCTTTT chrV:6129-6546 - 62 8.41e-08 GAAGGTGAGC ATGGTGTGTGGGTGT GGGTGTGGGT chrIV:525020-525450 + 16 8.41e-08 TATTTTTGGT GTAGTGTATGGGTGT TGTGAAAATA chrXIII:5274-5846 - 65 8.41e-08 GGATTGTGTT AGGGTGTGTGGGTGT GGTGTGTGGG chrII:415495-415873 + 47 1.05e-07 TCTGGATGAC AAAATGCATGGGTGT AAAAAAGGAA chrXII:1064817-1065385 + 40 1.30e-07 GTGTGTGTGT GTGGTGTGTGGGTGT GGTGGGTGTG chrXII:5414-5952 - 33 1.30e-07 TGGTGTGGGT GTGGTGTGTGGGTGT GGTGTATATA chrII:89640-89947 + 56 1.30e-07 GGTGTTAAAG AGGGTGTATGGATGT AAAGTCACAA chrX:160012-160112 - 71 1.30e-07 GTGCAACATT ATGGGGTATGGGTGT GTCACACATT chrXV:79760-80149 + 42 1.30e-07 TCACTTATTT AATATGTACGGGTGT TTACATGGAG chrXII:11007-11602 - 15 1.30e-07 GGGTGTGGGT GTGGTGTGTGGGTGT GGTGTGTGTG chrVI:64962-65345 + 62 1.30e-07 GTTATCTCTG AATATGTACGGGTGT TGACATGGAG chrII:592865-593278 + 62 1.30e-07 ATGGAGTTCA AAGATGTATGGATGC AAGAAAAGAG chrXII:922095-922572 - 62 1.30e-07 CGAGAATTGG AATATGTACGGGTGT CAATTTCAAA chrXIII:224048-224359 + 35 1.89e-07 AAATTTCAAA AAAATGTATGGATGT AAAATTCAGT chrXV:94453-94849 - 34 1.89e-07 ACCGAAGACA ATAATGCATGGGTGT TAATTCTATT chrXIII:225342-225750 - 49 3.74e-07 AATAAAAAAT AGAATGTACGGATGT AATGCACGGA chrVII:726413-726793 - 34 3.74e-07 ATGGGTGTAT ATAGGGTATGGGTGT ACAGTTAATT chrXIII:551338-551807 + 4 4.43e-07 CTA TAAATGTATGGGTGC GTAATGTACA chrIX:254204-254595 + 7 4.43e-07 GCAATT AGAATGTGTGGGTGC GGAAGCTCGC chrI:81940-82287 + 45 4.43e-07 TCATCTAGCG GAGGTGCACGGATGT ACCAACAGTT chrV:53507-53929 - 51 4.43e-07 CCGAACACCA AATATGTGTGGGTGT CAAACAAAGA chrIV:538881-539263 - 83 4.43e-07 AAT GAGGGGTGTGGGTGT GATAATTCAT chrV:69054-69374 + 14 4.43e-07 GCGAAGCTTT GTGGGGTACGGGTGC ATGCTCGGCT chrIV:358087-358427 + 40 5.11e-07 TCCTTGTCAG ATAATGTATGGGTGG TGTGTACACC chrIII:58780-58957 - 53 5.11e-07 TTTTTCAGAA ATGGTGCACGGATGT ACCCACGCAA chrIX:68194-68549 - 29 5.11e-07 ATACATCTTA GTAATGTACGGATGT AATAAACTCA chrVIII:505801-506212 + 43 5.11e-07 ATGTCTGGGT GAAATGTATGGATGC ATAATTGTCT chrIV:1359383-1359828 - 41 5.11e-07 GCATGGGTGC GTAATGTACGGATGT TTAATGTCTT chrIII:29-671 - 44 5.89e-07 TGTTAGGGTG TGGGTGTGTGGGTGT GGGTGTGGTG chrVIII:175025-175406 - 17 5.89e-07 AAGGAGTTTC ATGATGTATGGGTCT CAGCATTGCG chrXV:901423-901664 + 45 6.79e-07 TCGGAAACGT AAAATGTACGGGTGA ACAGTCCCGA chrXV:678792-679205 + 60 6.79e-07 ATGGGTCCAC AATATGTACGGATGT ATGGTCCCAA chrXII:818797-819201 - 50 6.79e-07 TACAATAATC AATATGTACGGATGT TGGAAAGGTA chrVI:221724-222084 + 64 6.79e-07 TTGGGTGTTA AAAATGTACGGGTGA AAAAAGTCTT chrVII:254111-254586 + 47 7.79e-07 TACATCTTTC AATATGCACGGGTGC AACCTCAAAT chrXII:234610-234822 + 35 7.79e-07 ACGTTTTTAA GGAAGGTATGGGTGC AGTGTGCTTA chrX:607828-607928 - 53 8.93e-07 TGGGTTAAAA AGGATGTATGGATGG AGGGTTGGCA chrIV:229490-229820 - 49 8.93e-07 TATAATCCTT CTGATGTACGGATGT TTTGTGTAAG chrXII:262812-263129 - 45 1.02e-06 CAAATTAACA TAAATGTATGGATGT ATTATTAAAT chrVIII:125900-126319 - 43 1.02e-06 TGTAAAGATG TAGGTGTACGGATGC ATTAACGTCT chrIV:1525203-1525712 + 34 1.02e-06 GGTGTGGTGT GGTGTGTGTGGGTGT GGTGTGGTGT chrXVI:731900-732315 - 47 1.02e-06 CCAACCATCC TAAAGGTATGGGTGT ACTGACGATG chrVII:555322-555701 - 49 1.17e-06 CCAAACACCT TTAATGCACGGGTGT AAAAGGGATG chrVIII:148927-149275 + 29 1.17e-06 TTATAATCCA ATGGTGCATGGGTGA AAATGTATGG chrXI:108741-109103 - 49 1.17e-06 TGGAGCCAAC TAAATGTACGGATGT TGTAATGTGT chrXII:781438-781859 + 56 1.17e-06 TGGGTTTATG AAAATGCACGGATGC ATTTTCTCTA chrXV:1025750-1026015 - 44 1.17e-06 CCAATTACAC GTGATGAATGGGTGT TCAGCATATG chrXVI:406176-406576 - 45 1.33e-06 TTTGGAGGTG GAAAGGTACGGATGT TAAACTTCAT chrIV:217162-217544 - 11 1.33e-06 ATTATAGAAT AAAATGTACGGGTTC AAAGCAGGGC chrII:477039-477483 - 23 1.33e-06 TCTGGGTGTA TAAATGTGTGGGTGC AACATGAATG chrVII:149100-149522 + 43 1.33e-06 AAAAGAAATC AGTATGTATGGGTGG GTGTATGGAT chrIV:341241-341633 + 54 1.50e-06 ACTGGGTGTT AAAATGTACGGATGG AAAAGTAGAC chrXII:48700-49111 + 46 1.70e-06 AAGGGTGTCT AAGATGTACGGATCT TCATTGGGAT chrII:605720-606145 - 34 1.70e-06 GGTGATGGTG AAGATGTACAGGTGT AAAACTGTCA chrXII:282496-282891 - 14 1.70e-06 ACGGAGGGAA AAGATGTACAGGTGT AAAAAAGCAC chrIX:316124-316618 - 31 1.70e-06 GGTTTGTAAA ATAATGTATGGGTTC TAGTCTGAAA chrXVI:76313-76729 + 70 1.92e-06 AACACATCCG TGGATGTACGGGTGA AAATACAGTC chrX:75335-75435 + 18 2.15e-06 TTTTCAAATA GTGAGGTGTGGATGT ATAGAGGAAT chrVII:648935-649371 + 29 2.15e-06 ATTAAAAAAA GTAATGTATGGGTTC TCGTTGTACG chrXV:1028670-1029106 + 67 2.15e-06 GTAAACAAAT CAAATGTACGGATGC ACAATGGTAA chrIV:125367-125568 + 59 2.15e-06 ATAATTTGGT GCGGTGTATGGGTTC AAGTTCCCAA chrIV:1300925-1301345 - 24 2.15e-06 CCAAACATCC ACAGTGCACGGATGT TTGAAGGAAA chrVI:95459-95908 + 1 2.15e-06 . CCGGTGTGTGGGTGC ATGACTGATT chrIII:163439-163906 + 23 2.42e-06 CAGCCGCGGT TGGGTGCGTGGGTGC GGTAATTTAA chrVII:788298-788747 + 55 2.42e-06 TTGGGTTTAG AGTATGCACGGATGT TGTAAGGAAT chrXIV:444447-444785 + 53 2.42e-06 TACGGATTTA AAGAGGTACGGATGG AGACCGTAGA chrXII:1012111-1012393 - 36 2.71e-06 ACATTTGCGT GTGGTGCATGGGTTC TATTCCTCAT chrXII:241624-242018 - 36 2.71e-06 GTTTACATTT TATATGTACGGATGT AAAAAGGGAA chrXV:505105-505522 - 31 2.71e-06 GATAAGGTTC ATTGTGTATGGGTTT GAAATGAATG chrIV:117140-117600 - 50 2.71e-06 TATGGGTGTA GATATGTATGGGTCT GAGATTAATA chrX:391819-391919 - 63 2.71e-06 CCCGCTCGCA GGGAGGTCTGGGTGT GGGGCGTGTG chrXII:796398-796877 + 45 2.71e-06 GTTATTATCC AGGAGGCACGGATGC AAAAGATAGA chrVII:277042-277404 - 54 3.03e-06 TCCCATAGAG CGGGTGTATGGGTCT AGCTTAAATA chrIV:835741-836258 - 2 3.03e-06 GTGTGCGGTT GCGGGGCGTGGGTGT G chrXII:713139-713574 + 64 3.03e-06 TTTTTTTATA CATATGTACGGATGT GATAGTCTGC chrVIII:74941-75385 - 40 3.38e-06 ACGGATGTAG AAAATGTACAGGTGT GAACTTGCAG chrXIII:124311-124689 + 61 3.78e-06 ATACATTTTA ATAATGTACGGATTT AATAGCAGTC chrIV:411242-411660 - 34 4.21e-06 CTTTGGGTGC CCGGGGTGTGGGTGT TTGATTTGTT chrXII:645847-646116 - 15 4.21e-06 TTTCGCCCGA CGGGTGAATGGGTGT GGGTGGAACG chrXII:1028219-1028588 - 45 4.21e-06 CCCATACATT TTGGTGCATGGGTGA TATTTTGTCT chrVII:534789-535247 + 34 4.66e-06 ATGGGTTACA CAAATGCACGGATGC ATATATAAAA chrXI:382156-382482 - 36 4.66e-06 TGTGTTGGGT GTGATGTCCGGATGC AACAGCAGCA chrII:332315-332747 - 44 4.66e-06 TTTGGGTTTA GAATTGTATGGGTGC AGCAAGGAAA chrV:423088-423485 - 36 4.66e-06 TTGGGTGTAG AAGGTGTACGGAGGT AAATATGCAG chrXV:216237-216702 - 40 5.17e-06 CCTGGGTTGA GGAAGGCGCGGGTGC TCGGATGTTC chrXV:167971-168433 + 34 5.71e-06 TAAACTTAAA TATAGGCACGGGTGT TTAAAGCCGC chrXII:673811-674280 - 59 6.31e-06 GGATCAATAT CTGGTGCATGGGTCT AAAAAAATTA chrXIV:63091-63562 + 40 6.97e-06 GTGGGTTGCT AAAATGTTCGGATGT AAAGTAGTAT chrIV:308002-308392 - 57 7.68e-06 GATGTAACAG GAAATGTATGGGTCA CATATTAATA chrIV:1401252-1401619 - 48 7.68e-06 AAAAGGGTAA TATATGTGTGGGTGG AAAATGATTG chrII:798935-799092 - 65 8.45e-06 CTTCACCACA AGGGTGTGTGGCTGT GCGATAGACC chrIII:178297-178696 + 24 9.27e-06 AAAGAGTAGT AAAATGTACAGATGT TTATTAAGTC chrII:604115-604508 - 40 9.27e-06 GCGAATATGA AAAATGTACAGATGT GTAAATGTAC chrXV:978765-979156 + 26 1.02e-05 CGTATACACA AGGATGAATGGGTTC TACGACACCG chrX:651251-651351 - 64 1.02e-05 ACTTGAGACA AATATGTATGGGTTA AGAATAATTA chrXII:498507-498877 - 31 1.11e-05 AATTCCTTAC AGGATGCACGGAGGT AAACAGGAAA chrII:167889-168213 - 34 1.33e-05 ACTGGTGAAA AATATGTCTGGGTTT TAAAACACTG chrXV:968065-968434 + 68 1.33e-05 TCAAAAGCGT GGGGTGCGTGGGCGT GCGCTGCTCG chrI:68349-68545 - 30 1.45e-05 TCGACGTGCT GCGGTGCATGGCTGT TTTACCCGTT chrXIV:495182-495594 + 55 1.45e-05 TTGGGTGTGT ATAGTGTACGGATTG AATATGTCAA chrXV:908812-909169 - 65 1.58e-05 CTCCTGATAT GCGATGGGTGGGTGC CCCTGTGTCA chrIV:579059-579389 - 52 1.58e-05 AATTTTTTTA AAAATGTTTGGGTCT ACTTTATGGT chrVII:856695-857018 + 56 1.71e-05 TTCCATTGGT GCGGTGTATGGGCGG GTACCCTCAA chrX:90048-90148 - 56 1.71e-05 AAAAAACAAG GCCATGTATGGGTGA GAATGTCCAG chrXII:897701-898057 - 32 1.86e-05 ATGGGTTTTT TGGAGGTACAGGTGT TGTAGAATTC chrV:362188-362511 - 51 1.86e-05 ATATTGAAAT ATATTGTATGGGTTT AAATTTCTTG chrXV:232065-232306 + 18 2.02e-05 GGCCTTGGCA ACCGTGTCTGGGTGT GTGATATATT chrXI:158227-158602 - 36 2.02e-05 ATTTATTTCC AGTGTGCACGGGTTG AAATAAATGA chrXVI:699943-700398 - 49 2.19e-05 TTTTGAAGCT ATGGTGTGTGGGGGA TCACTTGTGG chrVII:919898-920244 - 51 2.37e-05 TGGGTTTTTT AATATGTTTGGGTTT TTATCATATT chrXII:924500-924930 + 63 2.37e-05 GACGGTACGG GCGGTGACTGGGTGC CAAACAGTGC chrIV:1278656-1278988 + 6 2.57e-05 GGGAT GCCATGCACGGATGC CTGCGGAGAC chrXVI:520157-520548 - 62 2.77e-05 TTTTCCTCCG GCGAGGCCTGGGTGG AACACTCAGG chrIV:599751-600252 - 1 3.23e-05 CCGAATCTGG CAGATGCATGGATCG chrXV:1004032-1004420 + 69 3.23e-05 CCGTATGTTA TGGGTGCAAGGGTGT TTTTTTTTTT chrXV:594220-594606 - 8 3.48e-05 CTTCCCAAGC ATGAGGCCCGGGTTC GATTCCC chrXV:980496-980937 + 8 3.74e-05 AAATCAC AAATTGTATGGGCGT GTGGTCTAGT chrXII:424075-424494 - 74 4.03e-05 GTGCACCACA GCAATGTACGTGTGT AGCGACTTAC chrXII:1018952-1019382 + 24 4.03e-05 ATAAAATATA TTAATGTTTGGGTTT CAACGTTTCC chrXIV:241381-241742 - 52 4.03e-05 ACGTGTATTG ATGGTGTTTAGGTGC TGGATGTTGG chrVIII:296861-297229 + 38 4.33e-05 ATGTTTCTTC GGTGGGTATGGGTCA CAATTTCGTC chrXV:281979-282358 + 13 4.33e-05 ATCGCTTAAA TAGAGGAGTGGATGC TCAGGATAAC chrV:23510-23913 - 25 4.33e-05 AAATGTGGGG GTGGGGTATGCGTTT CATGTGCGTG chrXIII:652063-652892 + 38 4.99e-05 TTTCATAAAG AAAGTGAGTGGATCT TCCCTGGAAG chrXIII:267919-268278 + 75 4.99e-05 AAGGATTTTT AATGTGTATGCGTTC CGAACTTTAA chrXIII:652063-652896 + 36 4.99e-05 TTTCATAAAG AAAGTGAGTGGATCT TCCCTGGAAG chrV:354729-355324 + 51 7.00e-05 CATCATACAG TGTATGTATGGGGTT AGGAGCCACC chrXIII:296768-298867 - 44 7.48e-05 TACAATGGAT CAGTTGCGCGGGTTT TCTAGGCCCG chrI:29-347 - 45 7.98e-05 TGGTAGTAAG TAGAGGGATGGATGG TGGTTCGGAG chrXIV:771908-772389 + 64 8.51e-05 GAAGGTGGAG GTGGGGTATGCATTT TTGTGCATAG chrIX:439102-439349 + 23 1.55e-04 TAAAAGTGGT ATAATGTATGCATTA AGAGCAGTTA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RWRRTGTAYGGRTGT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrVIII:382895-383343 7.3e-09 29_[+3]_56 chrX:157420-157520 3.1e-08 33_[+3]_52 chrXI:431339-431685 5.4e-08 31_[-3]_54 chrXVI:404562-404851 5.4e-08 49_[-3]_36 chrV:6129-6546 8.4e-08 61_[-3]_24 chrIV:525020-525450 8.4e-08 15_[+3]_70 chrXIII:5274-5846 8.4e-08 64_[-3]_21 chrII:415495-415873 1e-07 46_[+3]_39 chrXII:1064817-1065385 1.3e-07 39_[+3]_46 chrXII:5414-5952 1.3e-07 32_[-3]_53 chrII:89640-89947 1.3e-07 55_[+3]_30 chrX:160012-160112 1.3e-07 70_[-3]_15 chrXV:79760-80149 1.3e-07 41_[+3]_44 chrXII:11007-11602 1.3e-07 14_[-3]_71 chrVI:64962-65345 1.3e-07 61_[+3]_24 chrII:592865-593278 1.3e-07 61_[+3]_24 chrXII:922095-922572 1.3e-07 61_[-3]_24 chrXIII:224048-224359 1.9e-07 34_[+3]_51 chrXV:94453-94849 1.9e-07 33_[-3]_52 chrXIII:225342-225750 3.7e-07 48_[-3]_37 chrVII:726413-726793 3.7e-07 33_[-3]_52 chrXIII:551338-551807 4.4e-07 3_[+3]_82 chrIX:254204-254595 4.4e-07 6_[+3]_79 chrI:81940-82287 4.4e-07 44_[+3]_41 chrV:53507-53929 4.4e-07 50_[-3]_35 chrIV:538881-539263 4.4e-07 82_[-3]_3 chrV:69054-69374 4.4e-07 13_[+3]_72 chrIV:358087-358427 5.1e-07 39_[+3]_46 chrIII:58780-58957 5.1e-07 52_[-3]_33 chrIX:68194-68549 5.1e-07 28_[-3]_57 chrVIII:505801-506212 5.1e-07 42_[+3]_43 chrIV:1359383-1359828 5.1e-07 40_[-3]_45 chrIII:29-671 5.9e-07 43_[-3]_42 chrVIII:175025-175406 5.9e-07 16_[-3]_69 chrXV:901423-901664 6.8e-07 44_[+3]_41 chrXV:678792-679205 6.8e-07 59_[+3]_26 chrXII:818797-819201 6.8e-07 49_[-3]_36 chrVI:221724-222084 6.8e-07 63_[+3]_22 chrVII:254111-254586 7.8e-07 46_[+3]_39 chrXII:234610-234822 7.8e-07 34_[+3]_51 chrX:607828-607928 8.9e-07 52_[-3]_33 chrIV:229490-229820 8.9e-07 48_[-3]_37 chrXII:262812-263129 1e-06 44_[-3]_41 chrVIII:125900-126319 1e-06 42_[-3]_43 chrIV:1525203-1525712 1e-06 33_[+3]_52 chrXVI:731900-732315 1e-06 46_[-3]_39 chrVII:555322-555701 1.2e-06 48_[-3]_37 chrVIII:148927-149275 1.2e-06 28_[+3]_57 chrXI:108741-109103 1.2e-06 48_[-3]_37 chrXII:781438-781859 1.2e-06 55_[+3]_30 chrXV:1025750-1026015 1.2e-06 43_[-3]_42 chrXVI:406176-406576 1.3e-06 44_[-3]_41 chrIV:217162-217544 1.3e-06 10_[-3]_75 chrII:477039-477483 1.3e-06 22_[-3]_63 chrVII:149100-149522 1.3e-06 42_[+3]_43 chrIV:341241-341633 1.5e-06 53_[+3]_32 chrXII:48700-49111 1.7e-06 45_[+3]_40 chrII:605720-606145 1.7e-06 33_[-3]_52 chrXII:282496-282891 1.7e-06 13_[-3]_72 chrIX:316124-316618 1.7e-06 30_[-3]_55 chrXVI:76313-76729 1.9e-06 69_[+3]_16 chrX:75335-75435 2.2e-06 17_[+3]_68 chrVII:648935-649371 2.2e-06 28_[+3]_57 chrXV:1028670-1029106 2.2e-06 66_[+3]_19 chrIV:125367-125568 2.2e-06 58_[+3]_27 chrIV:1300925-1301345 2.2e-06 23_[-3]_62 chrVI:95459-95908 2.2e-06 [+3]_85 chrIII:163439-163906 2.4e-06 22_[+3]_63 chrVII:788298-788747 2.4e-06 54_[+3]_31 chrXIV:444447-444785 2.4e-06 52_[+3]_33 chrXII:1012111-1012393 2.7e-06 35_[-3]_50 chrXII:241624-242018 2.7e-06 35_[-3]_50 chrXV:505105-505522 2.7e-06 30_[-3]_55 chrIV:117140-117600 2.7e-06 49_[-3]_36 chrX:391819-391919 2.7e-06 62_[-3]_23 chrXII:796398-796877 2.7e-06 44_[+3]_41 chrVII:277042-277404 3e-06 53_[-3]_32 chrIV:835741-836258 3e-06 1_[-3]_84 chrXII:713139-713574 3e-06 63_[+3]_22 chrVIII:74941-75385 3.4e-06 39_[-3]_46 chrXIII:124311-124689 3.8e-06 60_[+3]_25 chrIV:411242-411660 4.2e-06 33_[-3]_52 chrXII:645847-646116 4.2e-06 14_[-3]_71 chrXII:1028219-1028588 4.2e-06 44_[-3]_41 chrVII:534789-535247 4.7e-06 33_[+3]_52 chrXI:382156-382482 4.7e-06 35_[-3]_50 chrII:332315-332747 4.7e-06 43_[-3]_42 chrV:423088-423485 4.7e-06 35_[-3]_50 chrXV:216237-216702 5.2e-06 39_[-3]_46 chrXV:167971-168433 5.7e-06 33_[+3]_52 chrXII:673811-674280 6.3e-06 58_[-3]_27 chrXIV:63091-63562 7e-06 39_[+3]_46 chrIV:308002-308392 7.7e-06 56_[-3]_29 chrIV:1401252-1401619 7.7e-06 47_[-3]_38 chrII:798935-799092 8.4e-06 64_[-3]_21 chrIII:178297-178696 9.3e-06 23_[+3]_62 chrII:604115-604508 9.3e-06 39_[-3]_46 chrXV:978765-979156 1e-05 25_[+3]_60 chrX:651251-651351 1e-05 63_[-3]_22 chrXII:498507-498877 1.1e-05 30_[-3]_55 chrII:167889-168213 1.3e-05 33_[-3]_52 chrXV:968065-968434 1.3e-05 67_[+3]_18 chrI:68349-68545 1.4e-05 29_[-3]_56 chrXIV:495182-495594 1.4e-05 54_[+3]_31 chrXV:908812-909169 1.6e-05 64_[-3]_21 chrIV:579059-579389 1.6e-05 51_[-3]_34 chrVII:856695-857018 1.7e-05 55_[+3]_30 chrX:90048-90148 1.7e-05 55_[-3]_30 chrXII:897701-898057 1.9e-05 31_[-3]_54 chrV:362188-362511 1.9e-05 50_[-3]_35 chrXV:232065-232306 2e-05 17_[+3]_68 chrXI:158227-158602 2e-05 35_[-3]_50 chrXVI:699943-700398 2.2e-05 48_[-3]_37 chrVII:919898-920244 2.4e-05 50_[-3]_35 chrXII:924500-924930 2.4e-05 62_[+3]_23 chrIV:1278656-1278988 2.6e-05 5_[+3]_80 chrXVI:520157-520548 2.8e-05 61_[-3]_24 chrIV:599751-600252 3.2e-05 [-3]_85 chrXV:1004032-1004420 3.2e-05 68_[+3]_17 chrXV:594220-594606 3.5e-05 7_[-3]_78 chrXV:980496-980937 3.7e-05 7_[+3]_78 chrXII:424075-424494 4e-05 73_[-3]_12 chrXII:1018952-1019382 4e-05 23_[+3]_62 chrXIV:241381-241742 4e-05 51_[-3]_34 chrVIII:296861-297229 4.3e-05 37_[+3]_48 chrXV:281979-282358 4.3e-05 12_[+3]_73 chrV:23510-23913 4.3e-05 24_[-3]_61 chrXIII:652063-652892 5e-05 37_[+3]_48 chrXIII:267919-268278 5e-05 74_[+3]_11 chrXIII:652063-652896 5e-05 35_[+3]_50 chrV:354729-355324 7e-05 50_[+3]_35 chrXIII:296768-298867 7.5e-05 43_[-3]_42 chrI:29-347 8e-05 44_[-3]_41 chrXIV:771908-772389 8.5e-05 63_[+3]_22 chrIX:439102-439349 0.00015 22_[+3]_63 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RWRRTGTAYGGRTGT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RWRRTGTAYGGRTGT width=15 seqs=135 chrVIII:382895-383343 ( 30) ATGATGTATGGGTGT 1 chrX:157420-157520 ( 34) AAAGTGTACGGGTGT 1 chrXI:431339-431685 ( 32) ATAGTGTATGGGTGT 1 chrXVI:404562-404851 ( 50) ATGATGCATGGGTGT 1 chrV:6129-6546 ( 62) ATGGTGTGTGGGTGT 1 chrIV:525020-525450 ( 16) GTAGTGTATGGGTGT 1 chrXIII:5274-5846 ( 65) AGGGTGTGTGGGTGT 1 chrII:415495-415873 ( 47) AAAATGCATGGGTGT 1 chrXII:1064817-1065385 ( 40) GTGGTGTGTGGGTGT 1 chrXII:5414-5952 ( 33) GTGGTGTGTGGGTGT 1 chrII:89640-89947 ( 56) AGGGTGTATGGATGT 1 chrX:160012-160112 ( 71) ATGGGGTATGGGTGT 1 chrXV:79760-80149 ( 42) AATATGTACGGGTGT 1 chrXII:11007-11602 ( 15) GTGGTGTGTGGGTGT 1 chrVI:64962-65345 ( 62) AATATGTACGGGTGT 1 chrII:592865-593278 ( 62) AAGATGTATGGATGC 1 chrXII:922095-922572 ( 62) AATATGTACGGGTGT 1 chrXIII:224048-224359 ( 35) AAAATGTATGGATGT 1 chrXV:94453-94849 ( 34) ATAATGCATGGGTGT 1 chrXIII:225342-225750 ( 49) AGAATGTACGGATGT 1 chrVII:726413-726793 ( 34) ATAGGGTATGGGTGT 1 chrXIII:551338-551807 ( 4) TAAATGTATGGGTGC 1 chrIX:254204-254595 ( 7) AGAATGTGTGGGTGC 1 chrI:81940-82287 ( 45) GAGGTGCACGGATGT 1 chrV:53507-53929 ( 51) AATATGTGTGGGTGT 1 chrIV:538881-539263 ( 83) GAGGGGTGTGGGTGT 1 chrV:69054-69374 ( 14) GTGGGGTACGGGTGC 1 chrIV:358087-358427 ( 40) ATAATGTATGGGTGG 1 chrIII:58780-58957 ( 53) ATGGTGCACGGATGT 1 chrIX:68194-68549 ( 29) GTAATGTACGGATGT 1 chrVIII:505801-506212 ( 43) GAAATGTATGGATGC 1 chrIV:1359383-1359828 ( 41) GTAATGTACGGATGT 1 chrIII:29-671 ( 44) TGGGTGTGTGGGTGT 1 chrVIII:175025-175406 ( 17) ATGATGTATGGGTCT 1 chrXV:901423-901664 ( 45) AAAATGTACGGGTGA 1 chrXV:678792-679205 ( 60) AATATGTACGGATGT 1 chrXII:818797-819201 ( 50) AATATGTACGGATGT 1 chrVI:221724-222084 ( 64) AAAATGTACGGGTGA 1 chrVII:254111-254586 ( 47) AATATGCACGGGTGC 1 chrXII:234610-234822 ( 35) GGAAGGTATGGGTGC 1 chrX:607828-607928 ( 53) AGGATGTATGGATGG 1 chrIV:229490-229820 ( 49) CTGATGTACGGATGT 1 chrXII:262812-263129 ( 45) TAAATGTATGGATGT 1 chrVIII:125900-126319 ( 43) TAGGTGTACGGATGC 1 chrIV:1525203-1525712 ( 34) GGTGTGTGTGGGTGT 1 chrXVI:731900-732315 ( 47) TAAAGGTATGGGTGT 1 chrVII:555322-555701 ( 49) TTAATGCACGGGTGT 1 chrVIII:148927-149275 ( 29) ATGGTGCATGGGTGA 1 chrXI:108741-109103 ( 49) TAAATGTACGGATGT 1 chrXII:781438-781859 ( 56) AAAATGCACGGATGC 1 chrXV:1025750-1026015 ( 44) GTGATGAATGGGTGT 1 chrXVI:406176-406576 ( 45) GAAAGGTACGGATGT 1 chrIV:217162-217544 ( 11) AAAATGTACGGGTTC 1 chrII:477039-477483 ( 23) TAAATGTGTGGGTGC 1 chrVII:149100-149522 ( 43) AGTATGTATGGGTGG 1 chrIV:341241-341633 ( 54) AAAATGTACGGATGG 1 chrXII:48700-49111 ( 46) AAGATGTACGGATCT 1 chrII:605720-606145 ( 34) AAGATGTACAGGTGT 1 chrXII:282496-282891 ( 14) AAGATGTACAGGTGT 1 chrIX:316124-316618 ( 31) ATAATGTATGGGTTC 1 chrXVI:76313-76729 ( 70) TGGATGTACGGGTGA 1 chrX:75335-75435 ( 18) GTGAGGTGTGGATGT 1 chrVII:648935-649371 ( 29) GTAATGTATGGGTTC 1 chrXV:1028670-1029106 ( 67) CAAATGTACGGATGC 1 chrIV:125367-125568 ( 59) GCGGTGTATGGGTTC 1 chrIV:1300925-1301345 ( 24) ACAGTGCACGGATGT 1 chrVI:95459-95908 ( 1) CCGGTGTGTGGGTGC 1 chrIII:163439-163906 ( 23) TGGGTGCGTGGGTGC 1 chrVII:788298-788747 ( 55) AGTATGCACGGATGT 1 chrXIV:444447-444785 ( 53) AAGAGGTACGGATGG 1 chrXII:1012111-1012393 ( 36) GTGGTGCATGGGTTC 1 chrXII:241624-242018 ( 36) TATATGTACGGATGT 1 chrXV:505105-505522 ( 31) ATTGTGTATGGGTTT 1 chrIV:117140-117600 ( 50) GATATGTATGGGTCT 1 chrX:391819-391919 ( 63) GGGAGGTCTGGGTGT 1 chrXII:796398-796877 ( 45) AGGAGGCACGGATGC 1 chrVII:277042-277404 ( 54) CGGGTGTATGGGTCT 1 chrIV:835741-836258 ( 2) GCGGGGCGTGGGTGT 1 chrXII:713139-713574 ( 64) CATATGTACGGATGT 1 chrVIII:74941-75385 ( 40) AAAATGTACAGGTGT 1 chrXIII:124311-124689 ( 61) ATAATGTACGGATTT 1 chrIV:411242-411660 ( 34) CCGGGGTGTGGGTGT 1 chrXII:645847-646116 ( 15) CGGGTGAATGGGTGT 1 chrXII:1028219-1028588 ( 45) TTGGTGCATGGGTGA 1 chrVII:534789-535247 ( 34) CAAATGCACGGATGC 1 chrXI:382156-382482 ( 36) GTGATGTCCGGATGC 1 chrII:332315-332747 ( 44) GAATTGTATGGGTGC 1 chrV:423088-423485 ( 36) AAGGTGTACGGAGGT 1 chrXV:216237-216702 ( 40) GGAAGGCGCGGGTGC 1 chrXV:167971-168433 ( 34) TATAGGCACGGGTGT 1 chrXII:673811-674280 ( 59) CTGGTGCATGGGTCT 1 chrXIV:63091-63562 ( 40) AAAATGTTCGGATGT 1 chrIV:308002-308392 ( 57) GAAATGTATGGGTCA 1 chrIV:1401252-1401619 ( 48) TATATGTGTGGGTGG 1 chrII:798935-799092 ( 65) AGGGTGTGTGGCTGT 1 chrIII:178297-178696 ( 24) AAAATGTACAGATGT 1 chrII:604115-604508 ( 40) AAAATGTACAGATGT 1 chrXV:978765-979156 ( 26) AGGATGAATGGGTTC 1 chrX:651251-651351 ( 64) AATATGTATGGGTTA 1 chrXII:498507-498877 ( 31) AGGATGCACGGAGGT 1 chrII:167889-168213 ( 34) AATATGTCTGGGTTT 1 chrXV:968065-968434 ( 68) GGGGTGCGTGGGCGT 1 chrI:68349-68545 ( 30) GCGGTGCATGGCTGT 1 chrXIV:495182-495594 ( 55) ATAGTGTACGGATTG 1 chrXV:908812-909169 ( 65) GCGATGGGTGGGTGC 1 chrIV:579059-579389 ( 52) AAAATGTTTGGGTCT 1 chrVII:856695-857018 ( 56) GCGGTGTATGGGCGG 1 chrX:90048-90148 ( 56) GCCATGTATGGGTGA 1 chrXII:897701-898057 ( 32) TGGAGGTACAGGTGT 1 chrV:362188-362511 ( 51) ATATTGTATGGGTTT 1 chrXV:232065-232306 ( 18) ACCGTGTCTGGGTGT 1 chrXI:158227-158602 ( 36) AGTGTGCACGGGTTG 1 chrXVI:699943-700398 ( 49) ATGGTGTGTGGGGGA 1 chrVII:919898-920244 ( 51) AATATGTTTGGGTTT 1 chrXII:924500-924930 ( 63) GCGGTGACTGGGTGC 1 chrIV:1278656-1278988 ( 6) GCCATGCACGGATGC 1 chrXVI:520157-520548 ( 62) GCGAGGCCTGGGTGG 1 chrIV:599751-600252 ( 1) CAGATGCATGGATCG 1 chrXV:1004032-1004420 ( 69) TGGGTGCAAGGGTGT 1 chrXV:594220-594606 ( 8) ATGAGGCCCGGGTTC 1 chrXV:980496-980937 ( 8) AAATTGTATGGGCGT 1 chrXII:424075-424494 ( 74) GCAATGTACGTGTGT 1 chrXII:1018952-1019382 ( 24) TTAATGTTTGGGTTT 1 chrXIV:241381-241742 ( 52) ATGGTGTTTAGGTGC 1 chrVIII:296861-297229 ( 38) GGTGGGTATGGGTCA 1 chrXV:281979-282358 ( 13) TAGAGGAGTGGATGC 1 chrV:23510-23913 ( 25) GTGGGGTATGCGTTT 1 chrXIII:652063-652892 ( 38) AAAGTGAGTGGATCT 1 chrXIII:267919-268278 ( 75) AATGTGTATGCGTTC 1 chrXIII:652063-652896 ( 36) AAAGTGAGTGGATCT 1 chrV:354729-355324 ( 51) TGTATGTATGGGGTT 1 chrXIII:296768-298867 ( 44) CAGTTGCGCGGGTTT 1 chrI:29-347 ( 45) TAGAGGGATGGATGG 1 chrXIV:771908-772389 ( 64) GTGGGGTATGCATTT 1 chrIX:439102-439349 ( 23) ATAATGTATGCATTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RWRRTGTAYGGRTGT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 48246 bayes= 8.53855 E= 1.1e-153 71 -126 49 -104 45 -92 -2 -7 22 -314 121 -84 100 -1372 89 -336 -1372 -1372 -20 145 -1372 -1372 235 -1372 -255 18 -372 122 124 -192 -2 -304 -536 98 -1372 100 -255 -1372 228 -1372 -1372 -272 230 -536 13 -372 174 -1372 -1372 -314 -272 164 -1372 -126 195 -90 -190 23 -114 98 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RWRRTGTAYGGRTGT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 135 E= 1.1e-153 0.496296 0.081481 0.274074 0.148148 0.414815 0.103704 0.192593 0.288889 0.355556 0.022222 0.451852 0.170370 0.607407 0.000000 0.362963 0.029630 0.000000 0.000000 0.170370 0.829630 0.000000 0.000000 1.000000 0.000000 0.051852 0.222222 0.014815 0.711111 0.718519 0.051852 0.192593 0.037037 0.007407 0.385185 0.000000 0.607407 0.051852 0.000000 0.948148 0.000000 0.000000 0.029630 0.962963 0.007407 0.333333 0.014815 0.651852 0.000000 0.000000 0.022222 0.029630 0.948148 0.000000 0.081481 0.755556 0.162963 0.081481 0.229630 0.088889 0.600000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RWRRTGTAYGGRTGT MEME-3 regular expression -------------------------------------------------------------------------------- [AG][AT][GA][AG]TG[TC]A[TC]GG[GA]TG[TC] -------------------------------------------------------------------------------- Time 857.47 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXVI:731900-732315 1.27e-03 46_[-3(1.02e-06)]_39 chrXV:520592-520970 5.37e-01 100 chrXI:141782-142212 3.25e-01 100 chrVIII:175025-175406 5.03e-04 16_[-3(5.89e-07)]_69 chrXV:109514-110072 2.76e-01 100 chrXII:796398-796877 6.16e-03 44_[+3(2.71e-06)]_41 chrVI:191364-191795 1.15e-05 55_[-2(2.20e-09)]_24 chrIV:1270139-1270569 3.06e-02 60_[+2(3.39e-05)]_19 chrIII:1022-1271 3.36e-01 100 chrXIII:195909-196368 1.88e-01 100 chrXVI:210051-210447 5.47e-09 1_[-1(2.21e-11)]_71 chrIV:1080500-1080890 7.10e-01 100 chrX:415811-415911 2.67e-01 100 chrV:423088-423485 1.59e-02 35_[-3(4.66e-06)]_50 chrVII:56785-57215 5.29e-02 41_[+2(7.23e-05)]_38 chrXIV:241381-241742 2.78e-02 51_[-3(4.03e-05)]_34 chrVII:27-233 1.92e-01 100 chrXIV:442816-443302 5.17e-05 4_[+2(7.48e-09)]_75 chrV:78242-78448 3.76e-01 100 chrIV:1401252-1401619 1.71e-02 32_[-3(2.02e-05)]_[-3(7.68e-06)]_38 chrXV:832374-832705 9.99e-01 100 chrIV:645012-645413 9.41e-03 100 chrIV:1359383-1359828 8.08e-04 40_[-3(5.11e-07)]_[-3(5.17e-06)]_30 chrXV:161720-162015 6.90e-03 43_[+2(3.09e-05)]_36 chrXVI:407335-407765 9.74e-01 100 chrVII:700478-701231 8.76e-01 100 chrVII:148082-148512 4.09e-01 100 chrXVI:821841-822283 7.48e-01 100 chrV:438518-438915 3.52e-11 41_[+2(1.08e-08)]_8_[+1(3.30e-10)]_\ 2 chrXII:712336-712766 1.34e-01 100 chrVII:479207-482825 1.35e-01 100 chrX:197187-197287 1.24e-05 26_[-2(1.64e-09)]_53 chrIII:294476-294906 9.75e-01 100 chrIV:49-384 5.90e-02 100 chrXIII:362858-363296 1.96e-04 71_[+1(2.71e-07)]_1 chrXII:499056-499667 6.77e-01 100 chrXII:1028219-1028588 1.79e-02 44_[-3(4.21e-06)]_41 chrV:362791-363221 9.08e-01 100 chrIV:1461561-1462021 1.93e-05 59_[-2(7.48e-09)]_20 chrX:349000-349100 9.28e-01 100 chrXIII:5274-5846 2.63e-04 32_[-3(1.30e-07)]_17_[-3(8.41e-08)]_\ 21 chrXVI:214828-215190 5.23e-01 100 chrIX:324169-324564 2.09e-01 100 chrXI:513234-513582 1.27e-01 100 chrIV:1402925-1403309 5.50e-01 100 chrXII:837642-839458 7.17e-01 100 chrXII:722815-723245 9.12e-01 100 chrI:71936-73330 6.79e-02 100 chrXII:673811-674280 3.12e-03 58_[-3(6.31e-06)]_27 chrIV:946112-946623 6.42e-08 2_[+2(1.06e-06)]_23_[+1(1.17e-08)]_\ 26 chrXI:517248-517492 3.49e-01 100 chrXV:464256-464683 2.25e-01 100 chrVII:727051-727481 6.54e-01 100 chrXIV:229761-230055 8.34e-01 100 chrXII:426944-427344 3.03e-05 72_[+1(9.31e-08)] chrX:606423-606523 3.41e-01 100 chrV:362188-362511 2.31e-02 50_[-3(1.86e-05)]_35 chrIV:1095176-1095634 2.61e-09 23_[-1(2.64e-09)]_26_[-2(3.10e-07)]_\ 2 chrIV:525020-525450 4.42e-04 15_[+3(8.41e-08)]_70 chrVII:405282-405742 5.50e-08 42_[+1(2.27e-12)]_30 chrIV:1087038-1087339 6.86e-01 100 chrIX:129871-130171 3.87e-02 100 chrXIII:388327-388597 1.56e-02 15_[+1(5.16e-05)]_57 chrV:69054-69374 2.70e-05 13_[+3(4.43e-07)]_72 chrX:531632-531732 7.21e-01 100 chrVII:149100-149522 7.20e-03 42_[+3(1.33e-06)]_43 chrXIV:726028-726415 2.04e-06 17_[-2(3.88e-09)]_62 chrIII:228527-228957 3.85e-01 100 chrX:121571-121671 7.83e-01 100 chrXIV:495182-495594 6.29e-03 37_[+3(4.66e-06)]_2_[+3(1.45e-05)]_\ 31 chrV:241971-242246 1.33e-01 100 chrXV:968065-968434 2.49e-03 67_[+3(1.33e-05)]_18 chrXIII:408379-408792 9.04e-01 100 chrXII:922095-922572 5.94e-04 35_[-3(3.38e-06)]_11_[-3(1.30e-07)]_\ 24 chrII:408623-408829 3.92e-02 45_[+1(5.47e-05)]_27 chrVI:95459-95908 8.34e-04 [+3(2.15e-06)]_85 chrXV:226485-226862 1.87e-01 100 chrXIV:63091-63562 1.87e-02 39_[+3(6.97e-06)]_46 chrII:332315-332747 2.04e-02 43_[-3(4.66e-06)]_1_[-3(6.55e-05)]_\ 26 chrVII:990014-990398 4.19e-01 100 chrXII:1018952-1019382 5.23e-02 23_[+3(4.03e-05)]_62 chrXV:900289-900719 8.29e-02 100 chrXII:424075-424494 7.24e-03 73_[-3(4.03e-05)]_12 chrXVI:718761-719030 7.52e-01 100 chrXIV:602144-602518 2.42e-16 38_[+2(1.52e-11)]_8_[+1(1.62e-12)]_\ 5 chrXVI:405019-405620 2.91e-01 100 chrVIII:375469-375899 1.44e-01 100 chrVI:224931-225132 4.39e-01 100 chrXV:897701-898131 2.11e-01 100 chrXV:980496-980937 2.62e-02 7_[+3(3.74e-05)]_78 chrXII:370443-371136 2.51e-01 100 chrXII:796981-797381 6.79e-02 100 chrXV:778565-778995 5.55e-01 100 chrVI:137277-137738 4.60e-12 37_[-1(9.36e-10)]_8_[-2(6.19e-10)]_\ 6 chrXI:432022-432452 9.68e-01 100 chrXV:663651-664066 3.52e-11 12_[-1(3.30e-10)]_8_[-2(1.08e-08)]_\ 31 chrXII:638907-639325 5.78e-01 100 chrXIV:776777-777054 9.23e-01 100 chrVIII:556146-556388 9.35e-01 100 chrIV:538881-539263 2.24e-04 82_[-3(4.43e-07)]_3 chrIV:1075323-1075731 1.02e-06 3_[-1(2.37e-10)]_69 chrVII:609581-610138 6.24e-01 100 chrVII:782213-782643 8.02e-01 100 chrIV:722457-722722 7.38e-01 100 chrV:141050-141441 7.16e-01 100 chrII:592865-593278 9.12e-04 44_[+3(2.02e-05)]_2_[+3(1.30e-07)]_\ 24 chrXV:903910-904603 2.88e-02 74_[+2(3.73e-05)]_5 chrXII:645976-646406 8.70e-01 100 chrXVI:404562-404851 1.80e-04 49_[-3(5.42e-08)]_36 chrII:555842-556040 9.97e-01 100 chrXV:94453-94849 1.78e-03 33_[-3(1.89e-07)]_52 chrXI:379490-379899 2.62e-11 43_[+2(1.08e-08)]_8_[+1(3.30e-10)] chrIV:667824-668287 2.42e-16 10_[-1(1.62e-12)]_8_[-2(1.52e-11)]_\ 33 chrIII:168173-168573 3.75e-02 100 chrVIII:386554-386984 4.09e-01 100 chrX:120430-120530 9.55e-01 100 chrXII:234610-234822 2.18e-03 34_[+3(7.79e-07)]_51 chrX:424299-424399 2.04e-06 33_[-2(3.88e-09)]_46 chrIV:356562-356680 6.15e-01 100 chrVI:64962-65345 4.64e-04 61_[+3(1.30e-07)]_24 chrVII:366076-366594 9.99e-01 100 chrXV:571767-572158 1.76e-01 100 chrX:617727-617827 2.28e-07 37_[+2(2.41e-10)]_42 chrIX:210470-210886 2.14e-07 44_[+2(1.52e-11)]_35 chrIV:520793-521164 1.14e-02 100 chrXII:1064171-1064601 8.08e-01 100 chrVII:545455-545579 9.30e-01 100 chrXIII:652063-652896 1.05e-01 35_[+3(4.99e-05)]_50 chrXII:489251-489600 9.79e-03 23_[+2(1.01e-05)]_56 chrII:644983-645393 5.47e-09 63_[+1(2.21e-11)]_9 chrI:20775-21146 8.85e-01 100 chrIV:543587-543863 6.22e-02 100 chrVII:986814-987718 9.24e-01 100 chrX:651251-651351 2.79e-02 63_[-3(1.02e-05)]_22 chrVII:882440-883689 3.26e-01 100 chrVIII:452672-452902 3.86e-01 100 chrXII:628192-628654 3.00e-05 17_[+2(7.48e-09)]_62 chrXIV:631712-632099 1.92e-01 100 chrXV:619214-619542 7.45e-02 100 chrXV:167971-168433 3.48e-03 33_[+3(5.71e-06)]_6_[-3(2.02e-05)]_\ 31 chrXII:592367-592807 5.70e-07 53_[-2(2.41e-10)]_26 chrXI:355309-356065 3.25e-01 100 chrX:90048-90148 3.62e-02 55_[-3(1.71e-05)]_30 chrIX:248618-249463 7.51e-02 100 chrIX:316124-316618 3.74e-03 30_[-3(1.70e-06)]_55 chrVII:736145-736584 5.04e-08 60_[+1(2.27e-12)]_12 chrIX:388573-388942 9.42e-01 100 chrVII:544375-544845 3.03e-05 25_[-1(9.31e-08)]_47 chrII:798935-799092 1.97e-02 64_[-3(8.45e-06)]_21 chrVII:794246-794610 2.49e-05 46_[+2(4.44e-09)]_33 chrXIII:751379-751487 3.54e-02 100 chrXI:748-1037 3.22e-01 100 chrVII:878580-879000 9.29e-01 100 chrXV:353871-354299 5.74e-13 14_[-1(1.04e-10)]_7_[-2(6.19e-10)]_\ 30 chrI:138967-139376 2.57e-01 100 chrIV:229490-229820 5.06e-03 24_[-3(2.15e-06)]_9_[-3(8.93e-07)]_\ 37 chrXIV:783792-784183 4.85e-01 100 chrIV:721788-722161 4.11e-02 100 chrXIV:569744-570100 2.42e-16 3_[-1(1.62e-12)]_8_[-2(1.52e-11)]_\ 40 chrV:53507-53929 2.70e-03 50_[-3(4.43e-07)]_35 chrIX:27-310 8.35e-01 100 chrII:326628-327051 9.05e-10 11_[-1(3.30e-10)]_8_[-2(8.51e-07)]_\ 32 chrXIII:808100-808507 7.27e-07 1_[-1(2.89e-09)]_71 chrV:42146-42418 1.66e-01 100 chrIV:550930-551112 1.09e-01 100 chrXI:140822-141261 5.47e-09 35_[-1(2.21e-11)]_37 chrXV:1004032-1004420 2.84e-02 68_[+3(3.23e-05)]_17 chrVIII:451471-451971 2.89e-01 100 chrII:167889-168213 1.55e-02 33_[-3(1.33e-05)]_52 chrIV:1269925-1270355 5.47e-01 100 chrI:28552-28910 9.19e-01 100 chrIV:1525203-1525712 2.61e-03 4_[+3(1.33e-05)]_14_[+3(1.02e-06)]_\ 52 chrIV:465153-465519 1.29e-01 100 chrXII:713139-713574 1.66e-02 63_[+3(3.03e-06)]_22 chrIX:177630-177985 4.65e-01 100 chrIV:1175634-1176070 1.82e-07 62_[+1(2.65e-10)]_10 chrV:117600-118294 1.93e-01 100 chrXIV:632415-632844 4.60e-12 27_[+2(6.19e-10)]_8_[+1(9.36e-10)]_\ 16 chrVIII:35188-35790 1.56e-01 100 chrVII:781960-782390 9.12e-01 100 chrV:354729-355324 7.01e-02 50_[+3(7.00e-05)]_35 chrVII:726413-726793 1.67e-03 33_[-3(3.74e-07)]_2_[-3(3.74e-07)]_\ 35 chrXII:637011-638489 5.94e-01 100 chrIV:579059-579389 2.11e-02 51_[-3(1.58e-05)]_34 chrXII:952692-952935 4.89e-01 100 chrXV:925179-925484 5.81e-01 100 chrIII:29-671 1.77e-03 11_[-3(1.02e-06)]_17_[-3(5.89e-07)]_\ 42 chrV:174729-174972 1.03e-01 100 chrI:81940-82287 1.87e-04 44_[+3(4.43e-07)]_41 chrVIII:382895-383343 3.77e-06 29_[+3(7.32e-09)]_2_[+3(1.58e-05)]_\ 39 chrI:76864-77294 8.75e-01 100 chrXV:288012-288421 6.91e-04 33_[+2(1.06e-06)]_46 chrXIII:306088-306458 4.27e-01 100 chrX:391819-391919 1.92e-03 62_[-3(2.71e-06)]_23 chrIV:434022-434527 3.12e-07 48_[-1(1.04e-10)]_24 chrXII:282496-282891 1.13e-02 13_[-3(1.70e-06)]_2_[-3(2.37e-05)]_\ 55 chrXV:911989-912419 7.55e-01 100 chrIV:117140-117600 3.10e-03 49_[-3(2.71e-06)]_36 chrXII:794187-795267 6.59e-01 100 chrXIV:722394-722595 1.86e-01 100 chrXIV:444447-444785 1.21e-02 36_[+3(3.78e-06)]_1_[+3(2.42e-06)]_\ 33 chrVIII:125900-126319 6.46e-03 42_[-3(1.02e-06)]_43 chrXII:875203-875621 1.04e-11 21_[+2(5.05e-08)]_30_[+1(1.68e-10)] chrX:355183-355283 1.18e-01 100 chrIV:410200-410590 4.13e-12 41_[+2(1.64e-09)]_7_[+1(8.47e-10)]_\ 3 chrVII:316770-317200 5.89e-01 100 chrXII:201874-202301 4.52e-02 54_[-1(4.74e-05)]_18 chrXV:383170-383464 1.00e+00 100 chrII:477039-477483 2.60e-03 3_[-3(2.57e-05)]_4_[-3(1.33e-06)]_\ 63 chrVII:1050230-1050506 3.04e-01 100 chrXI:552068-552498 2.27e-01 100 chrII:605720-606145 6.05e-03 33_[-3(1.70e-06)]_52 chrXVI:585850-586098 9.40e-01 100 chrI:70686-71116 9.25e-01 100 chrXV:1025750-1026015 1.90e-03 43_[-3(1.17e-06)]_42 chrII:236684-237114 8.85e-01 100 chrXV:27845-28046 4.43e-01 100 chrXIII:224048-224359 9.70e-04 34_[+3(1.89e-07)]_10_[+3(8.45e-06)]_\ 26 chrXVI:192440-192870 5.66e-01 100 chrVII:786940-787370 7.31e-01 100 chrXI:382156-382482 1.93e-04 35_[-3(4.66e-06)]_25_[-2(3.56e-05)]_\ 4 chrXII:567991-568421 4.73e-01 100 chrVIII:146066-146500 6.64e-12 17_[-1(8.47e-10)]_7_[-2(1.64e-09)]_\ 27 chrXIV:426900-427186 2.33e-01 100 chrV:23510-23913 1.58e-02 24_[-3(4.33e-05)]_61 chrIV:308002-308392 4.57e-03 56_[-3(7.68e-06)]_5_[-3(7.48e-05)]_\ 9 chrII:197307-197904 7.24e-01 100 chrIV:600-831 3.69e-01 100 chrXIII:420418-420843 3.52e-11 16_[-1(3.30e-10)]_8_[-2(1.08e-08)]_\ 27 chrXIV:715961-716532 9.70e-01 100 chrIX:254204-254595 1.88e-03 6_[+3(4.43e-07)]_35_[+3(7.00e-05)]_\ 29 chrVII:541644-542159 5.47e-09 33_[+1(2.21e-11)]_39 chrXII:781438-781859 7.23e-03 37_[+3(6.13e-05)]_3_[+3(1.17e-06)]_\ 30 chrXV:281979-282358 1.03e-02 12_[+3(4.33e-05)]_73 chrV:266198-266438 1.11e-01 100 chrXVI:744094-744505 1.55e-05 69_[+1(1.27e-08)]_3 chrXV:83177-83479 1.51e-02 9_[+2(7.62e-06)]_70 chrVIII:505801-506212 1.49e-03 42_[+3(5.11e-07)]_43 chrXIII:267919-268278 9.85e-02 74_[+3(4.99e-05)]_11 chrVIII:85183-85562 1.01e-04 20_[-2(1.08e-08)]_59 chrV:321957-322805 6.22e-01 100 chrV:492202-492612 7.68e-09 3_[-1(2.42e-09)]_7_[-2(5.42e-07)]_\ 41 chrXI:162277-162734 5.50e-08 40_[-1(2.27e-12)]_32 chrXII:47636-48066 7.72e-01 100 chrXII:975840-976218 4.60e-12 12_[-1(9.36e-10)]_8_[-2(6.19e-10)]_\ 31 chrV:434366-434801 1.97e-04 16_[-1(2.71e-07)]_56 chrXIII:296768-298867 9.49e-02 43_[-3(7.48e-05)]_42 chrIV:893993-894264 3.07e-01 100 chrX:139225-139325 3.65e-01 100 chrXII:897701-898057 6.51e-02 31_[-3(1.86e-05)]_54 chrXII:84100-84476 9.26e-01 100 chrII:604115-604508 4.28e-03 23_[-3(3.48e-05)]_1_[-3(9.27e-06)]_\ 46 chrXIV:301682-302023 3.37e-01 100 chrXII:11007-11602 5.55e-04 14_[-3(1.30e-07)]_15_[-3(5.89e-07)]_\ 24_[-3(1.02e-06)]_2 chrIII:123404-123823 2.59e-08 22_[-1(1.26e-11)]_50 chrXIV:96034-96531 2.45e-07 17_[-1(1.26e-09)]_55 chrXI:158227-158602 6.33e-02 35_[-3(2.02e-05)]_6_[-3(9.06e-05)]_\ 29 chrV:207157-207596 1.97e-04 65_[+1(2.71e-07)]_7 chrIV:1300925-1301345 6.61e-03 23_[-3(2.15e-06)]_62 chrXV:505105-505522 6.13e-03 30_[-3(2.71e-06)]_10_[-3(1.45e-05)]_\ 30 chrV:424875-424997 3.44e-01 100 chrXV:900589-901019 1.00e+00 100 chrXV:976226-976672 1.13e-06 57_[+1(2.65e-10)]_15 chrXII:645847-646116 1.23e-03 14_[-3(4.21e-06)]_71 chrX:652163-652263 3.51e-01 100 chrXIV:104619-105080 5.74e-13 13_[+2(6.19e-10)]_7_[+1(1.04e-10)]_\ 31 chrXII:92362-92851 1.98e-06 57_[+1(8.47e-10)]_15 chrXVI:856711-857115 1.92e-06 46_[+2(1.64e-09)]_33 chrXIII:23767-25968 7.41e-01 100 chrVII:323745-324064 4.76e-01 100 chrX:538365-538465 2.76e-01 100 chrVII:557602-558032 1.70e-01 100 chrVIII:296861-297229 2.32e-02 37_[+3(4.33e-05)]_48 chrXI:517796-518156 2.90e-06 69_[+2(1.64e-09)]_10 chrVI:221724-222084 1.19e-03 63_[+3(6.79e-07)]_22 chrVIII:358334-358756 1.50e-03 6_[-2(1.25e-05)]_18_[-2(3.10e-07)]_\ 34 chrIV:599751-600252 3.93e-03 [-3(3.23e-05)]_85 chrXIII:290622-291008 5.47e-09 70_[+1(2.21e-11)]_2 chrVII:592549-592928 4.65e-01 100 chrXIV:102526-102895 8.84e-06 63_[+2(6.19e-10)]_16 chrXI:308007-308401 8.03e-05 34_[-2(1.08e-08)]_45 chrIX:386624-386981 9.20e-01 100 chrVII:774168-774632 6.64e-12 6_[+2(1.64e-09)]_7_[+1(8.47e-10)]_\ 38 chrIV:519559-519933 2.08e-06 54_[+2(3.88e-09)]_25 chrXII:949557-949807 8.83e-01 100 chrVIII:381525-381986 9.57e-01 100 chrII:606573-607003 3.14e-01 100 chrX:195204-195304 5.10e-01 100 chrXI:100827-101257 9.09e-01 100 chrXV:989073-989522 2.33e-01 100 chrVII:823292-823688 8.13e-05 49_[+2(1.08e-08)]_30 chrIII:142598-142955 1.87e-01 100 chrXI:28-322 1.55e-01 100 chrXI:258419-258953 4.71e-02 100 chrXV:384747-385021 5.47e-01 100 chrII:36203-36617 2.60e-04 45_[+2(3.10e-07)]_34 chrXVI:114499-114690 7.19e-01 100 chrXI:431339-431685 7.11e-04 31_[-3(5.42e-08)]_54 chrIV:1489111-1489796 6.41e-01 100 chrVII:930824-931214 1.87e-01 100 chrV:99931-100363 7.56e-07 21_[+2(1.06e-05)]_28_[+1(4.18e-08)]_\ 2 chrXII:48700-49111 4.25e-03 45_[+3(1.70e-06)]_40 chrXI:578780-579257 1.04e-11 4_[+2(5.05e-08)]_30_[+1(1.68e-10)]_\ 17 chrXI:356098-356414 5.85e-01 100 chrXI:231147-231676 1.74e-02 100 chrIV:802586-802992 1.24e-07 [-1(5.63e-10)]_72 chrXVI:678817-679328 5.99e-01 100 chrXIV:503150-503298 9.60e-01 100 chrIX:131860-132061 7.36e-02 100 chrXV:79760-80149 5.86e-04 19_[+3(2.19e-05)]_7_[+3(1.30e-07)]_\ 44 chrV:6129-6546 3.62e-04 17_[-3(2.37e-05)]_29_[-3(8.41e-08)]_\ 24 chrV:269342-269543 7.94e-01 100 chrXII:232102-234054 6.34e-01 100 chrVII:857243-857663 3.00e-05 59_[-2(7.48e-09)]_20 chrXV:908812-909169 6.04e-02 64_[-3(1.58e-05)]_21 chrXV:160281-160541 3.78e-03 51_[+2(1.25e-05)]_28 chrVII:1004044-1004428 2.18e-05 64_[+1(1.27e-08)]_8 chrXV:778998-779162 9.96e-01 100 chrXIII:550637-551067 2.50e-01 100 chrV:441817-442631 4.17e-01 100 chrII:140428-140796 2.03e-01 100 chrXIII:463370-463843 3.03e-05 32_[+1(9.31e-08)]_40 chrVII:738935-739363 2.42e-16 30_[+2(1.52e-11)]_8_[+1(1.62e-12)]_\ 13 chrXI:46641-46994 4.58e-01 100 chrIV:125367-125568 1.30e-03 58_[+3(2.15e-06)]_27 chrVII:478142-478572 9.39e-01 100 chrXIII:756344-756614 5.85e-01 100 chrXIII:306439-307094 7.26e-01 100 chrXVI:193105-193362 8.79e-01 100 chrXII:86913-87161 3.77e-01 100 chrII:373109-373399 8.15e-02 100 chrVIII:401075-401263 2.89e-01 100 chrVII:346049-346578 8.02e-01 100 chrVII:399838-399969 6.34e-01 100 chrXVI:645310-645736 4.41e-01 100 chrXIII:480469-480873 2.67e-12 8_[-1(2.27e-12)]_7_[-2(4.63e-07)]_\ 36 chrXVI:770718-771148 7.50e-01 100 chrVII:828493-828981 5.50e-08 44_[-1(2.27e-12)]_28 chrVII:845452-845907 4.27e-07 53_[+1(1.89e-10)]_19 chrIV:1013704-1013979 3.68e-02 100 chrX:157420-157520 2.96e-04 16_[+3(8.41e-08)]_2_[+3(3.15e-08)]_\ 52 chrI:166064-166546 1.75e-13 19_[+2(4.44e-09)]_7_[+1(6.94e-12)]_\ 25 chrIX:255492-255706 1.13e-01 100 chrX:354064-354164 2.13e-03 33_[+2(1.06e-06)]_46 chrVII:412126-412554 3.52e-11 12_[-1(3.30e-10)]_8_[-2(1.08e-08)]_\ 31 chrX:390887-390987 1.24e-06 [-1(2.65e-10)]_72 chrXV:779692-780990 6.30e-01 100 chrVII:344514-344636 6.82e-01 100 chrXVI:193687-194533 9.25e-02 100 chrIV:835741-836258 4.72e-03 1_[-3(3.03e-06)]_84 chrIV:1150665-1151125 7.83e-06 67_[-2(2.20e-09)]_12 chrV:167250-167680 6.69e-01 100 chrXV:487255-487674 4.60e-12 32_[+2(6.19e-10)]_8_[+1(9.36e-10)]_\ 11 chrXIII:572739-573137 1.13e-06 3_[-1(2.65e-10)]_69 chrXV:274479-274930 1.15e-05 26_[+2(2.20e-09)]_53 chrIV:1270517-1270947 7.29e-01 100 chrV:130962-131343 1.04e-01 100 chrX:542815-542915 4.45e-03 42_[-2(1.06e-06)]_37 chrX:607828-607928 5.25e-03 52_[-3(8.93e-07)]_3_[-3(1.22e-05)]_\ 15 chrXI:84013-84410 2.19e-07 54_[+2(3.88e-09)]_25 chrV:61152-62138 5.15e-01 100 chrIV:992622-993057 1.79e-01 100 chrIV:541675-541943 3.11e-01 100 chrVII:122091-122513 2.67e-12 24_[+2(4.63e-07)]_7_[+1(2.27e-12)]_\ 20 chrIV:1345303-1345705 1.73e-01 100 chrXVI:576107-576349 3.40e-02 48_[+2(3.24e-05)]_31 chrIV:1278656-1278988 2.27e-03 5_[+3(2.57e-05)]_80 chrXVI:810456-810862 3.70e-06 74_[+2(6.19e-10)]_5 chrXI:313236-313650 1.97e-04 16_[-1(2.71e-07)]_56 chrIX:439102-439349 2.45e-01 100 chrXIV:771908-772389 2.50e-02 63_[+3(8.51e-05)]_22 chrV:78555-78665 3.36e-01 100 chrIX:380417-380730 4.13e-02 100 chrIII:107308-107555 2.77e-01 100 chrIV:217162-217544 1.11e-03 10_[-3(1.33e-06)]_75 chrVII:730955-731375 4.60e-12 29_[+2(6.19e-10)]_8_[+1(9.36e-10)]_\ 14 chrXV:671029-671484 3.87e-01 100 chrVII:205339-205777 2.59e-05 20_[+2(7.48e-09)]_59 chrXI:108741-109103 5.08e-03 30_[-3(4.99e-05)]_3_[-3(1.17e-06)]_\ 37 chrXII:241624-242018 8.76e-03 35_[-3(2.71e-06)]_6_[-3(7.68e-06)]_\ 29 chrXIII:124311-124689 4.97e-03 44_[-3(2.42e-06)]_1_[+3(3.78e-06)]_\ 25 chrVII:788298-788747 7.24e-03 54_[+3(2.42e-06)]_31 chrX:204542-204642 9.57e-06 61_[+1(9.31e-08)]_11 chrXV:1028670-1029106 3.75e-03 66_[+3(2.15e-06)]_19 chrX:73377-73477 9.94e-01 100 chrII:557481-557911 3.93e-01 100 chrIV:45181-45611 4.53e-04 25_[+1(8.11e-06)]_47 chrXIII:162051-162481 5.27e-02 35_[+1(4.60e-05)]_37 chrX:378172-378272 2.82e-11 43_[+2(1.08e-08)]_8_[+1(3.30e-10)] chrVII:277042-277404 1.45e-02 29_[+3(6.13e-05)]_9_[-3(3.03e-06)]_\ 32 chrI:29-347 7.94e-02 44_[-3(7.98e-05)]_41 chrII:376011-376316 2.34e-01 100 chrII:88894-89324 3.40e-01 100 chrXV:796952-797351 7.97e-01 100 chrXII:29-314 8.49e-01 100 chrVII:227613-228043 8.98e-01 100 chrXII:818797-819201 4.06e-03 49_[-3(6.79e-07)]_36 chrVIII:466796-467190 1.74e-01 100 chrXV:978765-979156 2.61e-03 25_[+3(1.02e-05)]_60 chrXVI:560027-560483 3.22e-10 1_[-1(2.64e-09)]_26_[-2(3.10e-07)]_\ 24 chrV:461860-462177 5.75e-01 100 chrXIII:887499-887802 7.87e-01 100 chrXVI:406176-406576 4.59e-03 44_[-3(1.33e-06)]_1_[-3(6.13e-05)]_\ 25 chrXV:80824-81085 4.86e-01 100 chrV:469268-469666 7.80e-05 47_[+2(1.08e-08)]_32 chrIII:163439-163906 1.82e-03 22_[+3(2.42e-06)]_15_[+3(1.33e-05)]_\ 33 chrXII:950509-950795 7.58e-01 100 chrXV:424188-424634 4.13e-01 100 chrXII:924500-924930 1.85e-02 62_[+3(2.37e-05)]_23 chrX:160012-160112 6.19e-04 28_[-3(9.06e-05)]_27_[-3(1.30e-07)]_\ 15 chrIV:411242-411660 3.24e-03 33_[-3(4.21e-06)]_13_[-3(7.00e-05)]_\ 24 chrVII:919898-920244 8.41e-02 50_[-3(2.37e-05)]_3_[-3(4.03e-05)]_\ 17 chrII:478941-479346 5.46e-01 100 chrIV:1490045-1490425 6.79e-01 100 chrV:302884-303314 4.42e-01 100 chrXV:228140-228551 4.60e-12 43_[+2(6.19e-10)]_8_[+1(9.36e-10)] chrXI:614759-615260 2.38e-01 100 chrI:182393-182811 1.01e-04 22_[-2(1.95e-08)]_57 chrI:190176-190423 2.79e-02 100 chrI:68349-68545 2.11e-02 29_[-3(1.45e-05)]_56 chrXIV:585828-586452 9.16e-01 100 chrIV:568706-569161 5.50e-08 33_[+1(2.27e-12)]_39 chrV:311844-312279 2.09e-13 20_[-1(6.94e-12)]_7_[-2(4.44e-09)]_\ 24 chrXVI:689379-689852 1.23e-05 7_[+2(2.93e-09)]_72 chrXVI:775645-776019 7.55e-01 100 chrII:6352-6569 9.23e-01 100 chrXII:734626-735002 1.42e-07 45_[+2(1.52e-11)]_34 chrXIV:494112-494542 1.98e-01 100 chrXIV:567923-568376 3.08e-01 100 chrVII:185558-185956 2.67e-12 15_[-1(2.27e-12)]_7_[-2(4.63e-07)]_\ 29 chrXV:110783-111220 2.45e-07 19_[-1(1.26e-09)]_53 chrXIII:747757-748148 5.10e-01 100 chrXV:624091-624306 7.44e-01 100 chrXV:216237-216702 1.24e-02 39_[-3(5.17e-06)]_1_[-3(5.35e-05)]_\ 30 chrIV:341241-341633 3.62e-04 53_[+3(1.50e-06)]_32 chrVII:1000176-1000590 6.42e-01 100 chrV:77546-77895 9.32e-01 100 chrXVI:581871-582302 2.67e-12 33_[+2(4.63e-07)]_7_[+1(2.27e-12)]_\ 11 chrVII:702716-703283 2.58e-01 100 chrXV:444847-446110 1.12e-01 100 chrVII:534789-535247 5.85e-03 16_[+3(7.00e-05)]_2_[+3(4.66e-06)]_\ 52 chrXI:283840-284288 5.40e-01 100 chrVIII:455624-455943 5.61e-01 100 chrIV:386544-387271 8.98e-01 100 chrXIII:225342-225750 9.15e-04 48_[-3(3.74e-07)]_37 chrXII:656806-657185 7.65e-06 32_[-2(1.64e-09)]_47 chrVII:648935-649371 1.09e-02 28_[+3(2.15e-06)]_[+3(2.37e-05)]_42 chrXV:232065-232306 1.13e-02 17_[+3(2.02e-05)]_68 chrIV:1017009-1017468 4.11e-08 27_[-1(2.21e-11)]_45 chrIX:98361-98791 4.53e-01 100 chrXVI:699943-700398 1.15e-02 26_[-3(7.98e-05)]_7_[-3(2.19e-05)]_\ 37 chrII:135945-136318 1.22e-01 100 chrIX:68194-68549 1.42e-03 28_[-3(5.11e-07)]_57 chrI:142637-143174 1.05e-02 13_[-2(3.11e-06)]_66 chrVIII:74941-75385 1.78e-02 39_[-3(3.38e-06)]_46 chrXVI:76313-76729 1.53e-03 69_[+3(1.92e-06)]_16 chrXV:759189-759481 4.72e-01 100 chrVIII:148927-149275 9.32e-04 28_[+3(1.17e-06)]_57 chrIII:178297-178696 3.99e-02 23_[+3(9.27e-06)]_5_[-3(5.73e-05)]_\ 42 chrIV:980814-981237 5.04e-05 51_[-2(1.95e-08)]_28 chrIV:118333-118763 7.28e-01 100 chrVII:287186-287632 7.44e-01 100 chrXIII:551338-551807 2.12e-03 3_[+3(4.43e-07)]_[+3(5.73e-05)]_67 chrXV:159422-160316 1.21e-01 100 chrX:517680-517780 1.68e-04 5_[-1(4.18e-08)]_67 chrVII:440495-441003 4.30e-09 25_[-1(2.64e-09)]_26_[-2(3.10e-07)] chrXI:490782-491185 8.42e-09 42_[+2(5.42e-07)]_7_[+1(2.42e-09)]_\ 2 chrIX:141771-142068 5.49e-01 100 chrIII:58780-58957 8.57e-04 52_[-3(5.11e-07)]_33 chrXIII:499942-500189 3.53e-01 100 chrXIII:510786-511216 5.90e-01 100 chrXIII:183769-184153 2.70e-01 100 chrXIV:560538-560955 5.74e-13 5_[-1(1.04e-10)]_7_[-2(6.19e-10)]_\ 39 chrXVI:338729-339106 4.38e-01 100 chrVII:555322-555701 4.04e-03 48_[-3(1.17e-06)]_37 chrIII:127534-127905 8.84e-06 54_[+2(6.19e-10)]_25 chrXII:374167-374616 8.42e-09 21_[+2(5.42e-07)]_7_[+1(2.42e-09)]_\ 23 chrXV:710017-710380 7.60e-01 100 chrVII:115308-115758 1.04e-11 12_[+2(5.05e-08)]_30_[+1(1.68e-10)]_\ 9 chrVII:73727-74107 1.22e-04 6_[-2(1.08e-08)]_73 chrXI:326170-326851 5.32e-01 100 chrXII:784161-784587 7.83e-06 37_[+2(2.20e-09)]_42 chrXV:594220-594606 2.92e-02 7_[-3(3.48e-05)]_78 chrV:138479-138942 2.99e-09 40_[+1(2.27e-12)]_32 chrXV:854025-854456 2.09e-13 5_[-1(6.94e-12)]_7_[-2(4.44e-09)]_\ 39 chrXII:262812-263129 4.87e-03 44_[-3(1.02e-06)]_41 chrXIV:499890-500821 8.09e-01 100 chrVIII:236304-236734 7.24e-02 100 chrV:307136-307566 6.93e-01 100 chrXVI:520157-520548 1.56e-02 28_[+3(6.13e-05)]_18_[-3(2.77e-05)]_\ 24 chrVI:180722-181233 1.04e-06 55_[-1(1.89e-10)]_17 chrVI:157780-158195 1.83e-03 2_[-2(1.25e-05)]_18_[-2(3.10e-07)]_\ 38 chrXII:687659-688119 3.52e-11 28_[-1(3.30e-10)]_8_[-2(1.08e-08)]_\ 15 chrII:89640-89947 7.52e-04 35_[+3(9.27e-06)]_5_[+3(1.30e-07)]_\ 30 chrXV:1018906-1019336 3.86e-01 100 chrXII:1012111-1012393 3.05e-04 35_[-3(2.71e-06)]_50 chrXII:214769-215142 6.33e-06 21_[-2(4.44e-09)]_58 chrXI:302727-303187 6.16e-01 100 chrVII:766115-766505 6.54e-02 100 chrXII:605156-605607 1.78e-02 72_[-2(7.86e-05)]_7 chrV:167051-167481 9.99e-01 100 chrVII:706942-707384 4.40e-05 3_[-1(1.47e-08)]_69 chrV:176901-177383 5.47e-09 41_[+1(2.21e-11)]_31 chrIV:83372-83767 4.27e-07 62_[+1(1.89e-10)]_10 chrVI:64171-64423 5.62e-01 100 chrX:608718-608818 3.78e-01 100 chrVII:254111-254586 2.12e-03 29_[-3(5.11e-07)]_2_[+3(7.79e-07)]_\ 39 chrXVI:192240-192670 8.70e-01 100 chrXIII:761776-762210 7.41e-01 100 chrXIII:652063-652892 1.12e-01 37_[+3(4.99e-05)]_48 chrIV:488479-489076 1.72e-01 100 chrVIII:34442-35205 2.21e-01 100 chrXIV:546905-547365 3.08e-01 100 chrV:68329-68696 4.74e-01 100 chrXV:340134-340547 7.12e-10 17_[-1(2.42e-09)]_7_[-2(5.42e-07)]_\ 27 chrXV:678792-679205 1.82e-03 59_[+3(6.79e-07)]_26 chrXV:438462-438925 1.04e-11 7_[+2(5.05e-08)]_30_[+1(1.68e-10)]_\ 14 chrX:422752-422852 1.13e-06 49_[+1(2.65e-10)]_23 chrVIII:115941-116366 4.28e-13 12_[-1(1.04e-10)]_7_[-2(6.19e-10)]_\ 32 chrXVI:622378-622823 8.66e-04 13_[-2(1.25e-05)]_18_[-2(3.10e-07)]_\ 27 chrII:9396-9792 2.04e-06 46_[+2(3.88e-09)]_33 chrXV:901423-901664 2.20e-03 44_[+3(6.79e-07)]_41 chrX:374236-374336 2.01e-09 63_[-1(2.27e-12)]_9 chrXV:443819-444055 5.20e-01 100 chrVIII:386350-386780 9.36e-01 100 chrVII:856695-857018 1.87e-03 55_[+3(1.71e-05)]_30 chrIX:325559-326008 5.74e-13 22_[+2(6.19e-10)]_7_[+1(1.04e-10)]_\ 22 chrXII:498507-498877 4.18e-02 30_[-3(1.11e-05)]_55 chrVII:648247-648362 8.36e-01 100 chrIV:1201558-1202013 2.67e-12 22_[+2(4.63e-07)]_7_[+1(2.27e-12)]_\ 22 chrIX:98597-99027 8.87e-01 100 chrXII:232102-234064 6.34e-01 100 chrIII:299072-299300 1.83e-01 100 chrXII:5414-5952 1.06e-03 32_[-3(1.30e-07)]_15_[-3(1.02e-06)]_\ 2_[-3(2.69e-07)]_6 chrXIII:372301-372701 3.52e-11 2_[-1(3.30e-10)]_8_[-2(1.08e-08)]_\ 41 chrV:135209-135693 2.67e-12 32_[-1(2.27e-12)]_7_[-2(4.63e-07)]_\ 12 chrVIII:531524-531802 5.21e-01 100 chrXIII:550105-550293 1.00e+00 100 chrXIII:915032-915462 1.36e-01 100 chrXVI:407127-407557 2.19e-01 100 chrXII:263609-264039 8.64e-01 100 chrII:415495-415873 7.13e-04 30_[+3(2.37e-05)]_1_[+3(1.05e-07)]_\ 39 chrX:172838-172938 8.53e-01 100 chrVII:365146-365475 7.95e-01 100 chrIV:358087-358427 3.46e-03 39_[+3(5.11e-07)]_46 chrIII:295283-295743 5.74e-13 28_[+2(6.19e-10)]_7_[+1(1.04e-10)]_\ 16 chrIV:1305444-1305871 4.13e-05 30_[+2(1.95e-08)]_49 chrXIV:493894-494324 8.94e-01 100 chrV:288277-288704 1.23e-05 55_[-2(2.93e-09)]_24 chrIV:619810-620224 8.42e-09 10_[-1(2.42e-09)]_7_[-2(5.42e-07)]_\ 34 chrX:75335-75435 3.48e-04 17_[+3(2.15e-06)]_27_[+3(4.21e-06)]_\ 26 chrVII:328395-328939 2.55e-09 [+1(2.21e-11)]_72 chrIII:138786-138898 4.86e-02 15_[+2(2.31e-05)]_64 chrIX:183289-183703 2.42e-16 2_[-1(1.62e-12)]_8_[-2(1.52e-11)]_\ 41 chrXII:1064817-1065385 4.37e-04 6_[+3(5.89e-07)]_3_[+3(3.23e-05)]_\ [+3(1.30e-07)]_11_[+3(8.45e-06)]_3_[+3(8.45e-06)]_2 chrII:350648-351000 4.03e-01 100 chrVII:959289-959719 9.01e-01 100 chrXII:731901-732306 1.09e-06 44_[+2(2.41e-10)]_35 chrIV:1238169-1238375 2.62e-01 100 chrIII:292615-293045 9.95e-01 100 chrXIV:174330-174593 7.84e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************