Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.014449 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.056978 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.07311 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.014104 Invoking: fasta-subsample /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/seqs-centered 600 -rest /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/seqs-discarded -seed 1 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/seqs-sampled Finished invoke: name: sample_seqs status: 0 time: 0.064773 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background Finished invoke: name: bg status: 0 time: 0.011493 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 903.96262 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/seqs-shuffled Finished invoke: name: dreme status: 0 time: 96.460078 Invoking: centrimo -seqlen 460 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.201799 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.46593 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background -primary SSCTYTAMCCACTRVRCCAHVNRVSCW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.728453 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background -primary AATCDKRAGRTCMBSGGTTCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.621855 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background -primary WRCACCCRTACAYYWYW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.57858 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background -primary ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.308644 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background -primary AARAAAW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.629301 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background -primary AATMTTS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.444347 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background -primary CGSCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.408307 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background -primary CCGTGSA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.261659 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background -primary CGCSACA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.305221 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background -primary CSCATGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.285467 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background -primary ATATBTCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.27441 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background -primary GTGATAGY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.275644 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background -primary CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.339535 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background -primary CGTMTGAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.259721 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background -primary AGACTG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.312843 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/spamo_out_16 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background -primary GGAWTTGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo16 status: 0 time: 0.302118 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/spamo_out_17 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background -primary AGAAACAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml Finished invoke: name: spamo17 status: 0 time: 0.237478 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background --motif SSCTYTAMCCACTRVRCCAHVNRVSCW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa Finished invoke: name: fimo1 status: 0 time: 0.268283 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background --motif AATCDKRAGRTCMBSGGTTCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa Finished invoke: name: fimo2 status: 0 time: 0.25816 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background --motif WRCACCCRTACAYYWYW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa Finished invoke: name: fimo3 status: 0 time: 0.257979 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background --motif ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa Finished invoke: name: fimo4 status: 0 time: 0.152045 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background --motif AARAAAW /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa Finished invoke: name: fimo5 status: 0 time: 0.135221 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background --motif AATMTTS /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa Finished invoke: name: fimo6 status: 0 time: 0.134884 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background --motif CGSCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa Finished invoke: name: fimo7 status: 0 time: 0.146129 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background --motif CCGTGSA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa Finished invoke: name: fimo8 status: 0 time: 0.148295 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background --motif CGCSACA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa Finished invoke: name: fimo9 status: 0 time: 0.147825 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background --motif CSCATGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa Finished invoke: name: fimo10 status: 0 time: 0.146773 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background --motif ATATBTCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa Finished invoke: name: fimo11 status: 0 time: 0.14979 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background --motif GTGATAGY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa Finished invoke: name: fimo12 status: 0 time: 0.149133 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background --motif CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa Finished invoke: name: fimo13 status: 0 time: 0.150708 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background --motif CGTMTGAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa Finished invoke: name: fimo14 status: 0 time: 0.149292 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background --motif AGACTG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa Finished invoke: name: fimo15 status: 0 time: 0.131735 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/fimo_out_16 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background --motif GGAWTTGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa Finished invoke: name: fimo16 status: 0 time: 0.151033 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/fimo_out_17 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/background --motif AGAAACAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/BY4742--ARR1.fa Finished invoke: name: fimo17 status: 0 time: 0.148441 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4742--ARR1/summary.tsv Finished invoke: name: summary status: 0 time: 0.163393 Done