******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--ZAP1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrX:75339-75439 1.0000 100 chrXII:734676-735001 1.0000 100 chrXVI:279713-280057 1.0000 100 chrIV:229519-229791 1.0000 100 chrXVI:718497-718841 1.0000 100 chrVIII:74950-75405 1.0000 100 chrXV:678834-679143 1.0000 100 chrVII:317052-317396 1.0000 100 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1.0000 100 chrVI:83128-83231 1.0000 100 chrVI:221774-222066 1.0000 100 chrXV:725388-725732 1.0000 100 chrIV:118548-118662 1.0000 100 chrVII:730958-731367 1.0000 100 chrX:517705-517805 1.0000 100 chrXIV:330815-331096 1.0000 100 chrVIII:237707-238147 1.0000 100 chrV:397570-397914 1.0000 100 chrIX:316140-316556 1.0000 100 chrXI:202831-203146 1.0000 100 chrIV:1403053-1403272 1.0000 100 chrVII:328400-328864 1.0000 100 chrXV:978051-978395 1.0000 100 chrXIV:575385-575613 1.0000 100 chrI:72410-72754 1.0000 100 chrXIII:733253-733450 1.0000 100 chrVI:226557-226907 1.0000 100 chrX:139653-139753 1.0000 100 chrVIII:385100-385444 1.0000 100 chrXIII:183767-184124 1.0000 100 chrXIII:550051-550160 1.0000 100 chrV:110565-110808 1.0000 100 chrVI:157780-158193 1.0000 100 chrVII:205347-205698 1.0000 100 chrXI:490788-491096 1.0000 100 chrVIII:125956-126270 1.0000 100 chrIV:1201567-1201997 1.0000 100 chrIV:1228963-1229307 1.0000 100 chrIX:28-179 1.0000 100 chrXV:677992-678336 1.0000 100 chrVII:738924-739252 1.0000 100 chrIII:127554-127861 1.0000 100 chrXII:950996-951340 1.0000 100 chrI:180972-181430 1.0000 100 chrXIII:872662-873006 1.0000 100 chrXII:265538-265882 1.0000 100 chrIV:322419-322763 1.0000 100 chrVII:149147-149499 1.0000 100 chrX:115796-115896 1.0000 100 chrXII:796434-796881 1.0000 100 chrVIII:352794-353138 1.0000 100 chrVIII:132907-133329 1.0000 100 chrXVI:302649-302975 1.0000 100 chrVII:278458-278802 1.0000 100 chrXVI:856738-857067 1.0000 100 chrXII:48697-49075 1.0000 100 chrIV:491518-491862 1.0000 100 chrXVI:407682-408026 1.0000 100 chrII:557956-558300 1.0000 100 chrX:378177-378277 1.0000 100 chrV:117991-118278 1.0000 100 chrXIII:808102-808518 1.0000 100 chrX:702693-702793 1.0000 100 chrXII:819507-819851 1.0000 100 chrV:396215-396547 1.0000 100 chrXIV:102533-102908 1.0000 100 chrXII:241615-241994 1.0000 100 chrXI:108730-109066 1.0000 100 chrXV:842520-842864 1.0000 100 chrVII:311219-311516 1.0000 100 chrVI:210585-210878 1.0000 100 chrII:226884-227288 1.0000 100 chrV:362186-362473 1.0000 100 chrXII:282521-282848 1.0000 100 chrIV:992603-992958 1.0000 100 chrXI:284416-284760 1.0000 100 chrXVI:352291-352635 1.0000 100 chrXIV:104637-105098 1.0000 100 chrIX:324190-324533 1.0000 100 chrIX:174875-175284 1.0000 100 chrXII:243309-243653 1.0000 100 chrVIII:411261-411488 1.0000 100 chrV:303210-303306 1.0000 96 chrVI:5355-5699 1.0000 100 chrXII:838102-838291 1.0000 100 chrXVI:810434-810872 1.0000 100 chrIV:488528-489044 1.0000 100 chrXII:656808-657172 1.0000 100 chrIV:358134-358415 1.0000 100 chrI:229493-229645 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--ZAP1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--ZAP1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--ZAP1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 599 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 59851 N= 599 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.317 C 0.183 G 0.183 T 0.317 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--ZAP1/background): A 0.324 C 0.176 G 0.176 T 0.324 ******************************************************************************** ******************************************************************************** MOTIF RNSSCBYWACCVACTVGGCC MEME-1 width = 20 sites = 81 llr = 1415 E-value = 3.2e-278 ******************************************************************************** -------------------------------------------------------------------------------- Motif RNSSCBYWACCVACTVGGCC MEME-1 Description -------------------------------------------------------------------------------- Simplified A 42:::1:483:49::211:: pos.-specific C :264a34:17a3:8:32:a9 probability G 3346:2::1::31::469:: matrix T 23:::466:::::2a1:::1 bits 2.5 * * * 2.3 * * * 2.0 * * ** 1.8 * * * *** Relative 1.5 *** * ** *** Entropy 1.3 *** ** *** **** (25.2 bits) 1.0 *** ** *** **** 0.8 *** ***** *** **** 0.5 *** ********* **** 0.3 * ****************** 0.0 -------------------- Multilevel ATCGCTTTACCAACTGGGCC consensus GGGC CCA A C CC sequence C G G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RNSSCBYWACCVACTVGGCC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------- chrXV:854022-854424 + 59 4.93e-11 TTGCAAGGGA AGCGCGCTACCAACTGCGCC ATGTGCCCTG chrI:166056-166477 - 59 4.93e-11 TTGCAAGGGA AGCGCGCTACCAACTGCGCC ATGTGCCCAA chrXII:214761-215125 + 35 4.93e-11 TTGCAAGGGA AGCGCGCTACCAACTGCGCC ATGTGCCCTA chrV:311930-312269 + 19 4.93e-11 TTGCAAGGGA AGCGCGCTACCAACTGCGCC ATGTGCCCAG chrIX:174875-175284 - 10 9.38e-11 TTACTAGTGT GGCGCCTTACCAACTTGGCC ATAGAAGCT chrVIII:115984-116356 + 32 9.38e-11 TTACTAGTGT GGCGCCTTACCAACTTGGCC ATAGAAGCTC chrIV:434053-434575 + 45 9.38e-11 TTACTAGTGT GGCGCCTTACCAACTTGGCC ATAGAAGCTT chrII:266204-266658 - 5 9.38e-11 TTACTAGTGT GGCGCCTTACCAACTTGGCC ATAG chrX:58970-59070 + 36 9.38e-11 TTACTAGTGT GGCGCCTTACCAACTTGGCC ATAGAAGCTT chrXVI:689395-689799 - 26 1.16e-10 TTTCAAGTCT GTCGCCTTAACCACTCGGCC ATAGTGCCCA chrV:288384-288688 + 11 1.16e-10 TTTCAAGTCT GTCGCCTTAACCACTCGGCC ATAGTGCCTA chrXII:784186-784531 - 54 2.04e-10 AATAGCAGGC ATCGCCTTAACCACTCGGCC ACTGGGACGG chrVI:191365-191822 + 43 2.04e-10 ATAGCAGGGC ATCGCCTTAACCACTCGGCC ACTGGGACAG chrXV:274515-274911 - 18 2.04e-10 ATAGCAGGGC ATCGCCTTAACCACTCGGCC ACTGGGACAC chrIV:1150662-1151146 + 60 2.04e-10 AATAGCAGGC ATCGCCTTAACCACTCGGCC ACTGGGACTG chrXII:656808-657172 + 39 2.46e-10 ATGCTAAGGG AGCGCGCTACCGACTACGCC ACACGCCCAA chrXVI:856738-857067 - 58 2.46e-10 ATGCTAAGGG AGCGCGCTACCGACTACGCC ACACGCCCGA chrIV:410256-410509 - 55 2.46e-10 ATGCTAAGGG AGCGCGCTACCGACTACGCC ACACGCCCAA chrXIV:569848-570058 + 10 2.46e-10 ATTAGCACG GTGCCTTAACCAACTGGGCC AAGAGACCAC chrXIV:602192-602419 - 65 2.46e-10 TATTAGCACG GTGCCTTAACCAACTGGGCC AAGAGACCAT chrXI:219724-220095 - 44 2.46e-10 ATGCTAAGGG AGCGCGCTACCGACTACGCC ACACGCCCTA chrVIII:146049-146477 + 74 2.46e-10 ATGCTAAGGG AGCGCGCTACCGACTACGCC ACACGCC chrVI:204806-205160 + 36 2.46e-10 ATGCTAAGGG AGCGCGCTACCGACTACGCC ACACGCCCGA chrXVI:819323-819740 - 56 2.46e-10 TATTAGCACG GTGCCTTAACCAACTGGGCC AAGAGACCAT chrXII:734676-735001 - 22 2.46e-10 TATTAGCACG GTGCCTTAACCAACTGGGCC AAGAGACCAA chrII:226884-227288 - 47 7.57e-10 TTTCTAATCT TTCGCCTTAACCACTCGGCC AAGTTGCCTC chrVIII:132907-133329 + 12 7.57e-10 TTTCTAATCT TTCGCCTTAACCACTCGGCC AAGTTGCCAC chrXII:167826-168203 + 34 7.57e-10 TTTCTAATCT TTCGCCTTAACCACTCGGCC AAGTTGCCAT chrX:523871-523971 + 52 7.57e-10 TTTCTAATCT TTCGCCTTAACCACTCGGCC AAGTTGCCTT chrXIII:259061-259446 + 9 7.57e-10 TCTAATCT TTCGCCTTAACCACTCGGCC AAGTTGCCAT chrIV:980870-981251 + 18 7.57e-10 TTTCTAATCT TTCGCCTTAACCACTCGGCC AAGTTGCCTC chrXII:731877-732262 - 79 1.75e-09 TG ACGCCTTAAACCACTCGGCC AAACTCCCAT chrX:617738-617838 - 49 1.75e-09 CCTAAATCTG ACGCCTTAAACCACTCGGCC AAACTCCCAT chrXVI:810434-810872 - 81 2.54e-09 . ACGCCTTAACCAACTTGGCC ATGGAGTCGC chrXIV:102533-102908 - 54 2.54e-09 TAACAGTCGC ACGCCTTAACCAACTTGGCC ATGGAGTCTT chrIII:127554-127861 - 67 2.54e-09 TAACAGTCGC ACGCCTTAACCAACTTGGCC ATGGAGTCAT chrVII:730958-731367 - 33 2.54e-09 TAACAGTCGC ACGCCTTAACCAACTTGGCC ATGGAGTCTT chrXIV:632421-632773 - 60 2.54e-09 TAACAGTCGC ACGCCTTAACCAACTTGGCC ATGGAGTCAC chrXV:487241-487665 - 44 2.54e-09 TAACAGTCGC ACGCCTTAACCAACTTGGCC ATGGAGTCTA chrXI:74464-74829 - 36 2.54e-09 TAACAGTCGC ACGCCTTAACCAACTTGGCC ATGGAGTCTA chrIV:1201567-1201997 - 26 7.03e-09 TTAAGAGTCA TACGCGCTACCGATTGCGCC AACAAGGCTA chrVI:226557-226907 + 51 7.03e-09 TTAAGAGTCA TACGCGCTACCGATTGCGCC AACAAGGCAT chrXI:202831-203146 - 69 7.03e-09 TTAAGAGTCA TACGCGCTACCGATTGCGCC AACAAGGCTT chrIV:1352371-1352716 + 18 7.03e-09 TTAAGAGTCA TACGCGCTACCGATTGCGCC AACAAGGCTA chrVII:185644-185946 + 14 7.03e-09 TTAAGAGTCA TACGCGCTACCGATTGCGCC AACAAGGCTA chrV:435673-436010 + 6 7.03e-09 AGTCA TACGCGCTACCGATTGCGCC AACAAGGCTC chrIX:300105-300487 + 27 7.03e-09 TTAAGAGTCA TACGCGCTACCGATTGCGCC AACAAGGCTA chrVII:122102-122401 - 76 7.03e-09 AGTCA TACGCGCTACCGATTGCGCC AACAAGGCTA chrV:135222-135672 + 73 7.03e-09 TTAAGAGTCA TACGCGCTACCGATTGCGCC AACAAGGC chrXVI:581895-582227 - 59 7.03e-09 TTAAGAGTCA TACGCGCTACCGATTGCGCC AACAAGGCTC chrVII:205347-205698 - 57 2.37e-08 CTTGAATCAG GCGCCTTAGACCGCTCGGCC AAACAACCAC chrVII:857317-857637 + 37 2.37e-08 CTTGAATCAG GCGCCTTAGACCGCTCGGCC AAACAACCAC chrXII:628206-628619 - 29 2.37e-08 CTTGAATCAG GCGCCTTAGACCGCTCGGCC AAACAACCAC chrVII:422931-423298 - 36 2.37e-08 CTTGAATCAG GCGCCTTAGACCGCTCGGCC AAACAACCAC chrXIV:442842-443254 - 16 2.37e-08 CTTGAATCAG GCGCCTTAGACCGCTCGGCC AAACAACCAC chrIV:1461639-1462046 + 10 2.37e-08 TTGAATCAG GCGCCTTAGACCGCTCGGCC AAACAACCAC chrIV:359371-359856 - 22 3.02e-08 TTAAAAGCCG AACGCTCTACCAACTGAGCT AACAAGGATG chrXI:578834-579208 - 2 3.02e-08 TTAAAAGCCG AACGCTCTACCAACTGAGCT A chrVI:157780-158193 + 44 3.81e-08 TCTTCAGTCT GGCGCTCTCCCAACTGAGCT AAATCCGCTT chrVIII:237707-238147 + 35 3.81e-08 TCTTCAGTCT GGCGCTCTCCCAACTGAGCT AAATCCGCTT chrIV:1095193-1095634 + 71 3.81e-08 TCTTCAGTCT GGCGCTCTCCCAACTGAGCT AAGTCCGCTA chrII:9411-9712 - 80 3.81e-08 G CCGCCTTAGACCACTCGGCC AACCCTCCAC chrXIII:352111-352408 - 79 3.81e-08 CT GGCGCTCTCCCAACTGAGCT AAATCCGCTT chrII:347424-347789 - 55 3.81e-08 CTTAAGTCTG CCGCCTTAGACCACTCGGCC AACCCTCCGT chrXVI:560042-560491 + 46 3.81e-08 TCTTCAGTCT GGCGCTCTCCCAACTGAGCT AAATCCGCTC chrVII:440514-441018 + 64 3.81e-08 TCTTCAGTCT GGCGCTCTCCCAACTGAGCT AAATCCGCAT chrXVI:622480-622818 + 5 3.81e-08 GTCT GGCGCTCTCCCAACTGAGCT AAATCCGCAT chrX:378177-378277 - 56 4.11e-08 TGTTAAGCAG ATGCCATAACCGACTAGACC ACGAAACCTA chrVII:823303-823656 - 61 4.11e-08 TGTTAAGCAG ATGCCATAACCGACTAGACC ACGAAACCAC chrV:438508-438903 - 53 4.11e-08 TGTTAAGCAG ATGCCATAACCGACTAGACC ACGAAACCTA chrXV:340149-340590 + 25 4.11e-08 TTCGTAGCCA GACGCCGTGACCATTGGGCC ACGAGGAACA chrX:233756-233856 - 79 4.11e-08 CA GACGCCGTGACCATTGGGCC ACGAGGAACA chrV:469274-469610 - 73 4.11e-08 TTAAGCAG ATGCCATAACCGACTAGACC ACGAAACCAA chrVIII:85214-85552 + 11 4.11e-08 TGTTAAGCAG ATGCCATAACCGACTAGACC ACGAAACCAA chrVII:412199-412568 + 7 4.11e-08 AAGCAG ATGCCATAACCGACTAGACC ACGAAACCAG chrXI:308063-308379 + 19 4.11e-08 TGTTAAGCAG ATGCCATAACCGACTAGACC ACGAAACCAC chrVII:73736-74083 + 16 4.11e-08 TGTTAAGCAG ATGCCATAACCGACTAGACC ACGAAACCAC chrXV:663649-664050 + 59 4.11e-08 TGTTAAGCAG ATGCCATAACCGACTAGACC ACGAAACCAC chrV:492179-492584 + 66 4.11e-08 TTCGTAGCCA GACGCCGTGACCATTGGGCC ACGAGGAATA chrXIII:372342-372724 + 8 4.11e-08 TAAGCAG ATGCCATAACCGACTAGACC ACGAAACCAG chrIV:619777-620207 + 72 4.11e-08 TTCGTAGCCA GACGCCGTGACCATTGGGCC ACGAGGAAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RNSSCBYWACCVACTVGGCC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXV:854022-854424 4.9e-11 58_[+1]_22 chrI:166056-166477 4.9e-11 58_[-1]_22 chrXII:214761-215125 4.9e-11 34_[+1]_46 chrV:311930-312269 4.9e-11 18_[+1]_62 chrIX:174875-175284 9.4e-11 9_[-1]_71 chrVIII:115984-116356 9.4e-11 31_[+1]_49 chrIV:434053-434575 9.4e-11 44_[+1]_36 chrII:266204-266658 9.4e-11 4_[-1]_76 chrX:58970-59070 9.4e-11 35_[+1]_45 chrXVI:689395-689799 1.2e-10 25_[-1]_55 chrV:288384-288688 1.2e-10 10_[+1]_70 chrXII:784186-784531 2e-10 53_[-1]_27 chrVI:191365-191822 2e-10 42_[+1]_38 chrXV:274515-274911 2e-10 17_[-1]_63 chrIV:1150662-1151146 2e-10 59_[+1]_21 chrXII:656808-657172 2.5e-10 38_[+1]_42 chrXVI:856738-857067 2.5e-10 57_[-1]_23 chrIV:410256-410509 2.5e-10 54_[-1]_26 chrXIV:569848-570058 2.5e-10 9_[+1]_71 chrXIV:602192-602419 2.5e-10 64_[-1]_16 chrXI:219724-220095 2.5e-10 43_[-1]_37 chrVIII:146049-146477 2.5e-10 73_[+1]_7 chrVI:204806-205160 2.5e-10 35_[+1]_45 chrXVI:819323-819740 2.5e-10 55_[-1]_25 chrXII:734676-735001 2.5e-10 21_[-1]_59 chrII:226884-227288 7.6e-10 46_[-1]_34 chrVIII:132907-133329 7.6e-10 11_[+1]_69 chrXII:167826-168203 7.6e-10 33_[+1]_47 chrX:523871-523971 7.6e-10 51_[+1]_29 chrXIII:259061-259446 7.6e-10 8_[+1]_72 chrIV:980870-981251 7.6e-10 17_[+1]_63 chrXII:731877-732262 1.7e-09 78_[-1]_2 chrX:617738-617838 1.7e-09 48_[-1]_32 chrXVI:810434-810872 2.5e-09 80_[-1] chrXIV:102533-102908 2.5e-09 53_[-1]_27 chrIII:127554-127861 2.5e-09 66_[-1]_14 chrVII:730958-731367 2.5e-09 32_[-1]_48 chrXIV:632421-632773 2.5e-09 59_[-1]_21 chrXV:487241-487665 2.5e-09 43_[-1]_37 chrXI:74464-74829 2.5e-09 35_[-1]_45 chrIV:1201567-1201997 7e-09 25_[-1]_55 chrVI:226557-226907 7e-09 50_[+1]_30 chrXI:202831-203146 7e-09 68_[-1]_12 chrIV:1352371-1352716 7e-09 17_[+1]_63 chrVII:185644-185946 7e-09 13_[+1]_67 chrV:435673-436010 7e-09 5_[+1]_75 chrIX:300105-300487 7e-09 26_[+1]_54 chrVII:122102-122401 7e-09 75_[-1]_5 chrV:135222-135672 7e-09 72_[+1]_8 chrXVI:581895-582227 7e-09 58_[-1]_22 chrVII:205347-205698 2.4e-08 56_[-1]_24 chrVII:857317-857637 2.4e-08 36_[+1]_44 chrXII:628206-628619 2.4e-08 28_[-1]_52 chrVII:422931-423298 2.4e-08 35_[-1]_45 chrXIV:442842-443254 2.4e-08 15_[-1]_65 chrIV:1461639-1462046 2.4e-08 9_[+1]_71 chrIV:359371-359856 3e-08 21_[-1]_59 chrXI:578834-579208 3e-08 1_[-1]_79 chrVI:157780-158193 3.8e-08 43_[+1]_37 chrVIII:237707-238147 3.8e-08 34_[+1]_46 chrIV:1095193-1095634 3.8e-08 70_[+1]_10 chrII:9411-9712 3.8e-08 79_[-1]_1 chrXIII:352111-352408 3.8e-08 78_[-1]_2 chrII:347424-347789 3.8e-08 54_[-1]_26 chrXVI:560042-560491 3.8e-08 45_[+1]_35 chrVII:440514-441018 3.8e-08 63_[+1]_17 chrXVI:622480-622818 3.8e-08 4_[+1]_76 chrX:378177-378277 4.1e-08 55_[-1]_25 chrVII:823303-823656 4.1e-08 60_[-1]_20 chrV:438508-438903 4.1e-08 52_[-1]_28 chrXV:340149-340590 4.1e-08 24_[+1]_56 chrX:233756-233856 4.1e-08 78_[-1]_2 chrV:469274-469610 4.1e-08 72_[-1]_8 chrVIII:85214-85552 4.1e-08 10_[+1]_70 chrVII:412199-412568 4.1e-08 6_[+1]_74 chrXI:308063-308379 4.1e-08 18_[+1]_62 chrVII:73736-74083 4.1e-08 15_[+1]_65 chrXV:663649-664050 4.1e-08 58_[+1]_22 chrV:492179-492584 4.1e-08 65_[+1]_15 chrXIII:372342-372724 4.1e-08 7_[+1]_73 chrIV:619777-620207 4.1e-08 71_[+1]_9 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RNSSCBYWACCVACTVGGCC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RNSSCBYWACCVACTVGGCC width=20 seqs=81 chrXV:854022-854424 ( 59) AGCGCGCTACCAACTGCGCC 1 chrI:166056-166477 ( 59) AGCGCGCTACCAACTGCGCC 1 chrXII:214761-215125 ( 35) AGCGCGCTACCAACTGCGCC 1 chrV:311930-312269 ( 19) AGCGCGCTACCAACTGCGCC 1 chrIX:174875-175284 ( 10) GGCGCCTTACCAACTTGGCC 1 chrVIII:115984-116356 ( 32) GGCGCCTTACCAACTTGGCC 1 chrIV:434053-434575 ( 45) GGCGCCTTACCAACTTGGCC 1 chrII:266204-266658 ( 5) GGCGCCTTACCAACTTGGCC 1 chrX:58970-59070 ( 36) GGCGCCTTACCAACTTGGCC 1 chrXVI:689395-689799 ( 26) GTCGCCTTAACCACTCGGCC 1 chrV:288384-288688 ( 11) GTCGCCTTAACCACTCGGCC 1 chrXII:784186-784531 ( 54) ATCGCCTTAACCACTCGGCC 1 chrVI:191365-191822 ( 43) ATCGCCTTAACCACTCGGCC 1 chrXV:274515-274911 ( 18) ATCGCCTTAACCACTCGGCC 1 chrIV:1150662-1151146 ( 60) ATCGCCTTAACCACTCGGCC 1 chrXII:656808-657172 ( 39) AGCGCGCTACCGACTACGCC 1 chrXVI:856738-857067 ( 58) AGCGCGCTACCGACTACGCC 1 chrIV:410256-410509 ( 55) AGCGCGCTACCGACTACGCC 1 chrXIV:569848-570058 ( 10) GTGCCTTAACCAACTGGGCC 1 chrXIV:602192-602419 ( 65) GTGCCTTAACCAACTGGGCC 1 chrXI:219724-220095 ( 44) AGCGCGCTACCGACTACGCC 1 chrVIII:146049-146477 ( 74) AGCGCGCTACCGACTACGCC 1 chrVI:204806-205160 ( 36) AGCGCGCTACCGACTACGCC 1 chrXVI:819323-819740 ( 56) GTGCCTTAACCAACTGGGCC 1 chrXII:734676-735001 ( 22) GTGCCTTAACCAACTGGGCC 1 chrII:226884-227288 ( 47) TTCGCCTTAACCACTCGGCC 1 chrVIII:132907-133329 ( 12) TTCGCCTTAACCACTCGGCC 1 chrXII:167826-168203 ( 34) TTCGCCTTAACCACTCGGCC 1 chrX:523871-523971 ( 52) TTCGCCTTAACCACTCGGCC 1 chrXIII:259061-259446 ( 9) TTCGCCTTAACCACTCGGCC 1 chrIV:980870-981251 ( 18) TTCGCCTTAACCACTCGGCC 1 chrXII:731877-732262 ( 79) ACGCCTTAAACCACTCGGCC 1 chrX:617738-617838 ( 49) ACGCCTTAAACCACTCGGCC 1 chrXVI:810434-810872 ( 81) ACGCCTTAACCAACTTGGCC 1 chrXIV:102533-102908 ( 54) ACGCCTTAACCAACTTGGCC 1 chrIII:127554-127861 ( 67) ACGCCTTAACCAACTTGGCC 1 chrVII:730958-731367 ( 33) ACGCCTTAACCAACTTGGCC 1 chrXIV:632421-632773 ( 60) ACGCCTTAACCAACTTGGCC 1 chrXV:487241-487665 ( 44) ACGCCTTAACCAACTTGGCC 1 chrXI:74464-74829 ( 36) ACGCCTTAACCAACTTGGCC 1 chrIV:1201567-1201997 ( 26) TACGCGCTACCGATTGCGCC 1 chrVI:226557-226907 ( 51) TACGCGCTACCGATTGCGCC 1 chrXI:202831-203146 ( 69) TACGCGCTACCGATTGCGCC 1 chrIV:1352371-1352716 ( 18) TACGCGCTACCGATTGCGCC 1 chrVII:185644-185946 ( 14) TACGCGCTACCGATTGCGCC 1 chrV:435673-436010 ( 6) TACGCGCTACCGATTGCGCC 1 chrIX:300105-300487 ( 27) TACGCGCTACCGATTGCGCC 1 chrVII:122102-122401 ( 76) TACGCGCTACCGATTGCGCC 1 chrV:135222-135672 ( 73) TACGCGCTACCGATTGCGCC 1 chrXVI:581895-582227 ( 59) TACGCGCTACCGATTGCGCC 1 chrVII:205347-205698 ( 57) GCGCCTTAGACCGCTCGGCC 1 chrVII:857317-857637 ( 37) GCGCCTTAGACCGCTCGGCC 1 chrXII:628206-628619 ( 29) GCGCCTTAGACCGCTCGGCC 1 chrVII:422931-423298 ( 36) GCGCCTTAGACCGCTCGGCC 1 chrXIV:442842-443254 ( 16) GCGCCTTAGACCGCTCGGCC 1 chrIV:1461639-1462046 ( 10) GCGCCTTAGACCGCTCGGCC 1 chrIV:359371-359856 ( 22) AACGCTCTACCAACTGAGCT 1 chrXI:578834-579208 ( 2) AACGCTCTACCAACTGAGCT 1 chrVI:157780-158193 ( 44) GGCGCTCTCCCAACTGAGCT 1 chrVIII:237707-238147 ( 35) GGCGCTCTCCCAACTGAGCT 1 chrIV:1095193-1095634 ( 71) GGCGCTCTCCCAACTGAGCT 1 chrII:9411-9712 ( 80) CCGCCTTAGACCACTCGGCC 1 chrXIII:352111-352408 ( 79) GGCGCTCTCCCAACTGAGCT 1 chrII:347424-347789 ( 55) CCGCCTTAGACCACTCGGCC 1 chrXVI:560042-560491 ( 46) GGCGCTCTCCCAACTGAGCT 1 chrVII:440514-441018 ( 64) GGCGCTCTCCCAACTGAGCT 1 chrXVI:622480-622818 ( 5) GGCGCTCTCCCAACTGAGCT 1 chrX:378177-378277 ( 56) ATGCCATAACCGACTAGACC 1 chrVII:823303-823656 ( 61) ATGCCATAACCGACTAGACC 1 chrV:438508-438903 ( 53) ATGCCATAACCGACTAGACC 1 chrXV:340149-340590 ( 25) GACGCCGTGACCATTGGGCC 1 chrX:233756-233856 ( 79) GACGCCGTGACCATTGGGCC 1 chrV:469274-469610 ( 73) ATGCCATAACCGACTAGACC 1 chrVIII:85214-85552 ( 11) ATGCCATAACCGACTAGACC 1 chrVII:412199-412568 ( 7) ATGCCATAACCGACTAGACC 1 chrXI:308063-308379 ( 19) ATGCCATAACCGACTAGACC 1 chrVII:73736-74083 ( 16) ATGCCATAACCGACTAGACC 1 chrXV:663649-664050 ( 59) ATGCCATAACCGACTAGACC 1 chrV:492179-492584 ( 66) GACGCCGTGACCATTGGGCC 1 chrXIII:372342-372724 ( 8) ATGCCATAACCGACTAGACC 1 chrIV:619777-620207 ( 72) GACGCCGTGACCATTGGGCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RNSSCBYWACCVACTVGGCC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 48470 bayes= 9.48812 E= 3.2e-278 42 -283 97 -71 -71 25 63 -1 -1298 181 112 -1298 -1298 112 181 -1298 -1298 251 -1298 -1298 -139 56 49 19 -1298 102 -183 87 24 -1298 -1298 93 124 -103 -25 -1298 -1 195 -1298 -1298 -1298 251 -1298 -1298 14 87 87 -1298 151 -1298 -125 -1298 -1298 223 -1298 -91 -1298 -1298 -1298 163 -71 63 112 -113 -154 49 187 -1298 -139 -1298 232 -1298 -1298 251 -1298 -1298 -1298 234 -1298 -154 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RNSSCBYWACCVACTVGGCC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 81 E= 3.2e-278 0.432099 0.024691 0.345679 0.197531 0.197531 0.209877 0.271605 0.320988 0.000000 0.617284 0.382716 0.000000 0.000000 0.382716 0.617284 0.000000 0.000000 1.000000 0.000000 0.000000 0.123457 0.259259 0.246914 0.370370 0.000000 0.358025 0.049383 0.592593 0.382716 0.000000 0.000000 0.617284 0.765432 0.086420 0.148148 0.000000 0.320988 0.679012 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.358025 0.320988 0.320988 0.000000 0.925926 0.000000 0.074074 0.000000 0.000000 0.827160 0.000000 0.172840 0.000000 0.000000 0.000000 1.000000 0.197531 0.271605 0.382716 0.148148 0.111111 0.246914 0.641975 0.000000 0.123457 0.000000 0.876543 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.888889 0.000000 0.111111 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RNSSCBYWACCVACTVGGCC MEME-1 regular expression -------------------------------------------------------------------------------- [AG][TGC][CG][GC]C[TCG][TC][TA]A[CA]C[ACG]ACT[GC][GC]GCC -------------------------------------------------------------------------------- Time 353.20 secs. ******************************************************************************** ******************************************************************************** MOTIF GGRATCGAACCSVKGAYCTYHCSRTK MEME-2 width = 26 sites = 55 llr = 1092 E-value = 1.7e-207 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGRATCGAACCSVKGAYCTYHCSRTK MEME-2 Description -------------------------------------------------------------------------------- Simplified A 2:65:::aa::13127:1:132:411 pos.-specific C :::2:7:::a8531::6734454211 probability G 8a42::a::::33581::111164:3 matrix T :::1a3::::11:4:3426432::75 bits 2.5 * * * 2.3 * * * 2.0 * * * 1.8 * * * Relative 1.5 * ******* * * Entropy 1.3 ** ******* * * * (28.6 bits) 1.0 *** ******* * ** * 0.8 *** ******** * *** * 0.5 *** *************** *** 0.3 ************************** 0.0 -------------------------- Multilevel GGAATCGAACCCCGGACCTCCCGATT consensus A GG T GGTATTTCTTACG G sequence C A AT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRATCGAACCSVKGAYCTYHCSRTK MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------------- chrX:115796-115896 + 15 6.62e-13 TCCGATACGG GGAGTCGAACCCCGGTCTCCACGGTG AAAGCGTGAT chrVII:328400-328864 - 36 6.62e-13 TCCGATACGG GGAGTCGAACCCCGGTCTCCACGGTG AAAGCGTGAT chrII:645007-645373 - 62 6.62e-13 TCCGATACGG GGAGTCGAACCCCGGTCTCCACGGTG AAAGCGTGAT chrXI:140842-141310 + 3 6.62e-13 GG GGAGTCGAACCCCGGTCTCCACGGTG AAAGCGTGAT chrVII:541617-542165 - 44 6.62e-13 TCCGATACGG GGAGTCGAACCCCGGTCTCCACGGTG AAAGCGTGAT chrV:487213-487567 + 2 6.62e-13 G GGAGTCGAACCCCGGTCTCCACGGTG AAAGCGTGAT chrIII:123484-123789 + 2 1.11e-12 G GGACTCGAACCCGGGACCTCCCGCAC CCTAAGCGAG chrII:197261-197851 - 25 3.48e-12 GGTCTCTAGC GGGATCGAACCGCTGATCCCCGCGTT ATTAGCACGG chrXII:734676-735001 - 51 3.48e-12 GGTCTCTAGC GGGATCGAACCGCTGATCCCCGCGTT ATTAGCACGG chrXIII:183767-184124 + 14 9.88e-12 GCGCAAGCCC GGAATCGAACCGGGGGCCCAACGATG GCAACGTTGG chrVII:845474-845860 - 66 9.88e-12 CGCAAGCCC GGAATCGAACCGGGGGCCCAACGATG GCAACGTTGG chrV:61638-62168 + 48 9.88e-12 GCGCAAGCCC GGAATCGAACCGGGGGCCCAACGATG GCAACGTTGG chrX:531628-531728 - 22 9.88e-12 GCGCAAGCCC GGAATCGAACCGGGGGCCCAACGATG GCAACGTTGG chrXV:854022-854424 + 25 1.73e-11 GGACGCAACC GGAATCGAACCGATGACCTCTTCCTT GCAAGGGAAG chrXII:214761-215125 + 1 1.73e-11 . GGAATCGAACCGATGACCTCTTCCTT GCAAGGGAAG chrIV:1201567-1201997 - 54 3.83e-11 GCCCTGTAGG GGGCTCGAACCCCTAACCTTATGATT AAGAGTCATA chrVI:226557-226907 + 17 3.83e-11 GCCCTGTAGG GGGCTCGAACCCCTAACCTTATGATT AAGAGTCATA chrV:135222-135672 + 39 3.83e-11 GCCCTGTAGG GGGCTCGAACCCCTAACCTTATGATT AAGAGTCATA chrXV:438469-438937 - 49 7.15e-11 TCCTCATAGG GGGCTCGAACCCCTGACATTTCGGTA TCCTTGCTTA chrIV:359371-359856 - 73 7.15e-11 GG GGGCTCGAACCCCTGACATTTCGGTA TCCTTGCTTA chrXI:578834-579208 - 53 7.15e-11 TCCTCATAGG GGGCTCGAACCCCTGACATTTCGGTA TCCTTGCTTA chrXVI:769004-769473 + 30 7.15e-11 TCCTCATAGG GGGCTCGAACCCCTGACATTTCGGTA TCCTTGCTTA chrXII:656808-657172 + 5 9.09e-11 GTCC GGAATCGAACCGGAGACCTCTCCCAT GCTAAGGGAG chrXI:219724-220095 - 72 9.09e-11 TCC GGAATCGAACCGGAGACCTCTCCCAT GCTAAGGGAG chrVIII:146049-146477 + 40 9.09e-11 GGACGAGTCC GGAATCGAACCGGAGACCTCTCCCAT GCTAAGGGAG chrVI:204806-205160 + 2 9.09e-11 C GGAATCGAACCGGAGACCTCTCCCAT GCTAAGGGAG chrV:138494-138899 - 55 1.02e-10 ACTCACGATG GGGGTCGAACCCATAATCTTCTGATT AGAAGTCAGA chrVII:405309-405712 - 45 1.02e-10 ACTCACGATG GGGGTCGAACCCATAATCTTCTGATT AGAAGTCAGA chrVII:828489-828985 + 47 1.02e-10 ACTCACGATG GGGGTCGAACCCATAATCTTCTGATT AGAAGTCAGA chrIX:174875-175284 - 38 3.49e-10 GCTTCCAATC GGATTTGAACCGATGATCTCCACATT ACTAGTGTGG chrXIV:104637-105098 - 24 3.49e-10 GCTTCCAATC GGATTTGAACCGATGATCTCCACATT ACTAGTGTGG chrIV:434053-434575 + 11 3.49e-10 GCTTCCAATC GGATTTGAACCGATGATCTCCACATT ACTAGTGTGG chrII:266204-266658 - 33 3.49e-10 GCTTCCAATC GGATTTGAACCGATGATCTCCACATT ACTAGTGTGG chrX:58970-59070 + 2 3.49e-10 C GGATTTGAACCGATGATCTCCACATT ACTAGTGTGG chrXIV:96092-96480 + 16 6.45e-10 GAGCGGTACG AGAATCGAACCCGTGTCCCCACCTTG GAAGGGTGGG chrV:250124-250523 - 48 1.05e-09 GGTCCTACCC GGATTCGAACCGGGGTTGTCCGGATC AAAACCGAAA chrV:492179-492584 + 32 1.05e-09 TTCCCCGCCA GGACTTGAACCTGGAATCTTCTGGTT CGTAGCCAGA chrXII:374184-374644 - 27 1.05e-09 TTCCCCGCCA GGACTTGAACCTGGAATCTTCTGGTT CGTAGCCAGA chrIV:619777-620207 + 38 1.05e-09 TTCCCCGCCA GGACTTGAACCTGGAATCTTCTGGTT CGTAGCCAGA chrIV:1095193-1095634 + 18 4.62e-09 GCGAACTCTG TGGATCGAACACAGGACCTCCAGATA TCTTGACCAA chrVII:440514-441018 + 11 4.62e-09 GCGAATTCTG TGGATCGAACACAGGACCTCCAGATA ACTTGACCGA chrIV:1075326-1075679 + 31 5.01e-09 GTTCCAACCG AGGATCGAACTCGGGACCTTTGCCGT GTGAAGGCAA chrIX:324190-324533 + 3 7.96e-09 GG GGAATTGAACCCCGATCTGGCACGCG ACAAGCGCCC chrVII:544415-544816 + 23 7.96e-09 TCCGCGACGG GGAATTGAACCCCGATCTGGCACGCG ACAAGCGCCC chrXII:426985-427355 - 47 7.96e-09 TCCGCGACGG GGAATTGAACCCCGATCTGGCACGCG ACAAGCGCCC chrXII:793744-794113 - 75 7.96e-09 . GGAATTGAACCCCGATCTGGCACGCG ACAAGCGCCC chrVII:730958-731367 - 62 1.32e-08 GACCCCAGTG AGGGTTGAACTCACGATCTTGCGATT AACAGTCGCA chrXV:487241-487665 - 73 1.32e-08 TG AGGGTTGAACTCACGATCTTGCGATT AACAGTCGCA chrXI:74464-74829 - 65 1.32e-08 GACCCCAGTG AGGGTTGAACTCACGATCTTGCGATT AACAGTCGCA chrXV:663649-664050 + 24 1.42e-08 GATTTCGCCC AGGATCGAACTGGGGACGTTCTGCGT GTTAAGCAGA chrVII:319597-319995 - 70 1.74e-08 CTCCT AGAATCGAACCAGGGTTTCATCGGCC ACAACGATGT chrVII:110432-110907 + 17 1.74e-08 GCCATCTCCT AGAATCGAACCAGGGTTTCATCGGCC ACAACGATGT chrV:434394-434777 + 17 1.74e-08 GCCATCTCCT AGAATCGAACCAGGGTTTCATCGGCC ACAACGATGT chrX:390908-391008 + 11 1.86e-08 GCTCCAGGGG AGGTTCGAACTCTCGACCTTCAGATT ATGAGACTGA chrXVI:744105-744523 - 55 5.90e-08 GCCACCTGTC AGAATTGAACTAACGACCTTTGCATT ACAAGTGCAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRATCGAACCSVKGAYCTYHCSRTK MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:115796-115896 6.6e-13 14_[+2]_60 chrVII:328400-328864 6.6e-13 35_[-2]_39 chrII:645007-645373 6.6e-13 61_[-2]_13 chrXI:140842-141310 6.6e-13 2_[+2]_72 chrVII:541617-542165 6.6e-13 43_[-2]_31 chrV:487213-487567 6.6e-13 1_[+2]_73 chrIII:123484-123789 1.1e-12 1_[+2]_73 chrII:197261-197851 3.5e-12 24_[-2]_50 chrXII:734676-735001 3.5e-12 50_[-2]_24 chrXIII:183767-184124 9.9e-12 13_[+2]_61 chrVII:845474-845860 9.9e-12 65_[-2]_9 chrV:61638-62168 9.9e-12 47_[+2]_27 chrX:531628-531728 9.9e-12 21_[-2]_53 chrXV:854022-854424 1.7e-11 24_[+2]_50 chrXII:214761-215125 1.7e-11 [+2]_74 chrIV:1201567-1201997 3.8e-11 53_[-2]_21 chrVI:226557-226907 3.8e-11 16_[+2]_58 chrV:135222-135672 3.8e-11 38_[+2]_36 chrXV:438469-438937 7.1e-11 48_[-2]_26 chrIV:359371-359856 7.1e-11 72_[-2]_2 chrXI:578834-579208 7.1e-11 52_[-2]_22 chrXVI:769004-769473 7.1e-11 29_[+2]_45 chrXII:656808-657172 9.1e-11 4_[+2]_70 chrXI:219724-220095 9.1e-11 71_[-2]_3 chrVIII:146049-146477 9.1e-11 39_[+2]_35 chrVI:204806-205160 9.1e-11 1_[+2]_73 chrV:138494-138899 1e-10 54_[-2]_20 chrVII:405309-405712 1e-10 44_[-2]_30 chrVII:828489-828985 1e-10 46_[+2]_28 chrIX:174875-175284 3.5e-10 37_[-2]_37 chrXIV:104637-105098 3.5e-10 23_[-2]_51 chrIV:434053-434575 3.5e-10 10_[+2]_64 chrII:266204-266658 3.5e-10 32_[-2]_42 chrX:58970-59070 3.5e-10 1_[+2]_73 chrXIV:96092-96480 6.4e-10 15_[+2]_59 chrV:250124-250523 1e-09 47_[-2]_27 chrV:492179-492584 1e-09 31_[+2]_43 chrXII:374184-374644 1e-09 26_[-2]_48 chrIV:619777-620207 1e-09 37_[+2]_37 chrIV:1095193-1095634 4.6e-09 17_[+2]_57 chrVII:440514-441018 4.6e-09 10_[+2]_64 chrIV:1075326-1075679 5e-09 30_[+2]_44 chrIX:324190-324533 8e-09 2_[+2]_72 chrVII:544415-544816 8e-09 22_[+2]_52 chrXII:426985-427355 8e-09 46_[-2]_28 chrXII:793744-794113 8e-09 74_[-2] chrVII:730958-731367 1.3e-08 61_[-2]_13 chrXV:487241-487665 1.3e-08 72_[-2]_2 chrXI:74464-74829 1.3e-08 64_[-2]_10 chrXV:663649-664050 1.4e-08 23_[+2]_51 chrVII:319597-319995 1.7e-08 69_[-2]_5 chrVII:110432-110907 1.7e-08 16_[+2]_58 chrV:434394-434777 1.7e-08 16_[+2]_58 chrX:390908-391008 1.9e-08 10_[+2]_64 chrXVI:744105-744523 5.9e-08 54_[-2]_20 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRATCGAACCSVKGAYCTYHCSRTK MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGRATCGAACCSVKGAYCTYHCSRTK width=26 seqs=55 chrX:115796-115896 ( 15) GGAGTCGAACCCCGGTCTCCACGGTG 1 chrVII:328400-328864 ( 36) GGAGTCGAACCCCGGTCTCCACGGTG 1 chrII:645007-645373 ( 62) GGAGTCGAACCCCGGTCTCCACGGTG 1 chrXI:140842-141310 ( 3) GGAGTCGAACCCCGGTCTCCACGGTG 1 chrVII:541617-542165 ( 44) GGAGTCGAACCCCGGTCTCCACGGTG 1 chrV:487213-487567 ( 2) GGAGTCGAACCCCGGTCTCCACGGTG 1 chrIII:123484-123789 ( 2) GGACTCGAACCCGGGACCTCCCGCAC 1 chrII:197261-197851 ( 25) GGGATCGAACCGCTGATCCCCGCGTT 1 chrXII:734676-735001 ( 51) GGGATCGAACCGCTGATCCCCGCGTT 1 chrXIII:183767-184124 ( 14) GGAATCGAACCGGGGGCCCAACGATG 1 chrVII:845474-845860 ( 66) GGAATCGAACCGGGGGCCCAACGATG 1 chrV:61638-62168 ( 48) GGAATCGAACCGGGGGCCCAACGATG 1 chrX:531628-531728 ( 22) GGAATCGAACCGGGGGCCCAACGATG 1 chrXV:854022-854424 ( 25) GGAATCGAACCGATGACCTCTTCCTT 1 chrXII:214761-215125 ( 1) GGAATCGAACCGATGACCTCTTCCTT 1 chrIV:1201567-1201997 ( 54) GGGCTCGAACCCCTAACCTTATGATT 1 chrVI:226557-226907 ( 17) GGGCTCGAACCCCTAACCTTATGATT 1 chrV:135222-135672 ( 39) GGGCTCGAACCCCTAACCTTATGATT 1 chrXV:438469-438937 ( 49) GGGCTCGAACCCCTGACATTTCGGTA 1 chrIV:359371-359856 ( 73) GGGCTCGAACCCCTGACATTTCGGTA 1 chrXI:578834-579208 ( 53) GGGCTCGAACCCCTGACATTTCGGTA 1 chrXVI:769004-769473 ( 30) GGGCTCGAACCCCTGACATTTCGGTA 1 chrXII:656808-657172 ( 5) GGAATCGAACCGGAGACCTCTCCCAT 1 chrXI:219724-220095 ( 72) GGAATCGAACCGGAGACCTCTCCCAT 1 chrVIII:146049-146477 ( 40) GGAATCGAACCGGAGACCTCTCCCAT 1 chrVI:204806-205160 ( 2) GGAATCGAACCGGAGACCTCTCCCAT 1 chrV:138494-138899 ( 55) GGGGTCGAACCCATAATCTTCTGATT 1 chrVII:405309-405712 ( 45) GGGGTCGAACCCATAATCTTCTGATT 1 chrVII:828489-828985 ( 47) GGGGTCGAACCCATAATCTTCTGATT 1 chrIX:174875-175284 ( 38) GGATTTGAACCGATGATCTCCACATT 1 chrXIV:104637-105098 ( 24) GGATTTGAACCGATGATCTCCACATT 1 chrIV:434053-434575 ( 11) GGATTTGAACCGATGATCTCCACATT 1 chrII:266204-266658 ( 33) GGATTTGAACCGATGATCTCCACATT 1 chrX:58970-59070 ( 2) GGATTTGAACCGATGATCTCCACATT 1 chrXIV:96092-96480 ( 16) AGAATCGAACCCGTGTCCCCACCTTG 1 chrV:250124-250523 ( 48) GGATTCGAACCGGGGTTGTCCGGATC 1 chrV:492179-492584 ( 32) GGACTTGAACCTGGAATCTTCTGGTT 1 chrXII:374184-374644 ( 27) GGACTTGAACCTGGAATCTTCTGGTT 1 chrIV:619777-620207 ( 38) GGACTTGAACCTGGAATCTTCTGGTT 1 chrIV:1095193-1095634 ( 18) TGGATCGAACACAGGACCTCCAGATA 1 chrVII:440514-441018 ( 11) TGGATCGAACACAGGACCTCCAGATA 1 chrIV:1075326-1075679 ( 31) AGGATCGAACTCGGGACCTTTGCCGT 1 chrIX:324190-324533 ( 3) GGAATTGAACCCCGATCTGGCACGCG 1 chrVII:544415-544816 ( 23) GGAATTGAACCCCGATCTGGCACGCG 1 chrXII:426985-427355 ( 47) GGAATTGAACCCCGATCTGGCACGCG 1 chrXII:793744-794113 ( 75) GGAATTGAACCCCGATCTGGCACGCG 1 chrVII:730958-731367 ( 62) AGGGTTGAACTCACGATCTTGCGATT 1 chrXV:487241-487665 ( 73) AGGGTTGAACTCACGATCTTGCGATT 1 chrXI:74464-74829 ( 65) AGGGTTGAACTCACGATCTTGCGATT 1 chrXV:663649-664050 ( 24) AGGATCGAACTGGGGACGTTCTGCGT 1 chrVII:319597-319995 ( 70) AGAATCGAACCAGGGTTTCATCGGCC 1 chrVII:110432-110907 ( 17) AGAATCGAACCAGGGTTTCATCGGCC 1 chrV:434394-434777 ( 17) AGAATCGAACCAGGGTTTCATCGGCC 1 chrX:390908-391008 ( 11) AGGTTCGAACTCTCGACCTTCAGATT 1 chrXVI:744105-744523 ( 55) AGAATTGAACTAACGACCTTTGCATT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRATCGAACCSVKGAYCTYHCSRTK MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 26 n= 44876 bayes= 7.69315 E= 1.7e-207 -70 -1243 212 -315 -1243 -1243 251 -1243 97 -1243 105 -1243 49 18 31 -135 -1243 -1243 -1243 163 -1243 201 -1243 -16 -1243 -1243 251 -1243 163 -1243 -1243 -1243 163 -1243 -1243 -1243 -1243 251 -1243 -1243 -315 225 -1243 -135 -215 158 97 -257 -16 97 97 -415 -215 -95 143 17 -45 -1243 212 -1243 101 -1243 -127 -25 -1243 185 -1243 17 -215 189 -227 -45 -1243 72 -127 97 -135 131 -127 17 -35 125 -169 -25 -57 143 -95 -57 -1243 105 185 -1243 37 -11 118 -415 -183 -47 -227 120 -157 -95 63 70 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRATCGAACCSVKGAYCTYHCSRTK MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 26 nsites= 55 E= 1.7e-207 0.200000 0.000000 0.763636 0.036364 0.000000 0.000000 1.000000 0.000000 0.636364 0.000000 0.363636 0.000000 0.454545 0.200000 0.218182 0.127273 0.000000 0.000000 0.000000 1.000000 0.000000 0.709091 0.000000 0.290909 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.036364 0.836364 0.000000 0.127273 0.072727 0.527273 0.345455 0.054545 0.290909 0.345455 0.345455 0.018182 0.072727 0.090909 0.472727 0.363636 0.236364 0.000000 0.763636 0.000000 0.654545 0.000000 0.072727 0.272727 0.000000 0.636364 0.000000 0.363636 0.072727 0.654545 0.036364 0.236364 0.000000 0.290909 0.072727 0.636364 0.127273 0.436364 0.072727 0.363636 0.254545 0.418182 0.054545 0.272727 0.218182 0.472727 0.090909 0.218182 0.000000 0.363636 0.636364 0.000000 0.418182 0.163636 0.400000 0.018182 0.090909 0.127273 0.036364 0.745455 0.109091 0.090909 0.272727 0.527273 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGRATCGAACCSVKGAYCTYHCSRTK MEME-2 regular expression -------------------------------------------------------------------------------- [GA]G[AG][AGC]T[CT]GAACC[CG][CGA][GT][GA][AT][CT][CT][TC][CT][CTA][CAT][GC][AG]T[TG] -------------------------------------------------------------------------------- Time 677.60 secs. ******************************************************************************** ******************************************************************************** MOTIF HACAYCCRTACAYY MEME-3 width = 14 sites = 135 llr = 1558 E-value = 3.5e-192 ******************************************************************************** -------------------------------------------------------------------------------- Motif HACAYCCRTACAYY MEME-3 Description -------------------------------------------------------------------------------- Simplified A 3719:::618:9:2 pos.-specific C 218:6a9:2:a145 probability G :21::::4:2:::: matrix T 41::4:1:7:::63 bits 2.5 * * 2.3 * * 2.0 ** * 1.8 ** * Relative 1.5 * ** * Entropy 1.3 ***** ** (16.7 bits) 1.0 ***** *** 0.8 ****** **** 0.5 ************* 0.3 ************** 0.0 -------------- Multilevel TACACCCATACATC consensus A T GCG CT sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HACAYCCRTACAYY MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------- chrXVI:866539-866643 - 47 7.70e-09 CGAACGGAAA TACACCCATACACC AAACCTCTGT chrXIII:296792-297188 + 25 1.43e-08 GCATTACCCG CACACCCATACATC TAGAACTTTT chrVIII:382959-383335 - 4 1.43e-08 GAACATCCGA TACACCCATACATC ATG chrXIV:6584-6822 + 11 2.78e-08 ACACCACACC CACACCCACACACC CACACCCACA chrXII:5503-5861 + 33 2.78e-08 ATATATACAC CACACCCACACACC ACACCCACAC chrXI:666492-666771 - 31 2.78e-08 ACACCCACAC CACACCCACACACC CACAACCCTA chrXIV:783919-784154 - 74 2.78e-08 CCCACACACC CACACCCACACACC CACACACACC chrXV:35-216 + 11 2.78e-08 CACACCACAC CACACCCACACACC ACCCACACAC chrV:6188-6543 + 33 2.78e-08 CACCCACACC CACACCCACACACC ATGCTCACCT chrXII:1064912-1065323 - 26 2.78e-08 CCACACCCAC CACACCCACACACC ACACACACAC chrIII:34-321 + 9 2.78e-08 CACACACC CACACCCACACACC ACACCCACAC chrVIII:562330-562607 - 48 2.78e-08 CACACACACC CACACCCACACACC ACACCCACAC chrVI:4490-4942 + 38 2.78e-08 CCACACACAC CACACCCACACACC CACACCCACA chrXI:614107-614451 + 73 3.80e-08 TAATGACTGC AACACCCGCACACC ACAAGGTGAA chrXVI:404594-404765 + 76 4.73e-08 AAAAAGGCTG CACACCCATGCATC ATTCTAAAAA chrXIII:145894-146255 + 59 7.56e-08 AGCATTTTTG TACATCCATACACC ATACACCATA chrII:89668-89946 - 44 7.56e-08 TTTGTGACTT TACATCCATACACC CTCTTTAACA chrXIII:650835-651126 + 50 1.03e-07 TAGACTGTTT TACACCCGTACATT TCACAGTTTT chrVI:95533-95791 - 24 1.03e-07 CAATCAGTCA TGCACCCACACACC GGACTGCGTA chrXI:431317-431646 + 62 1.03e-07 ACAGCGCAAA TACACCCATACACT ATTTTTACAT chrXII:710594-710938 + 16 1.28e-07 AAGCAGGAAT CACACCCACGCATC TCATTTTGCG chrIV:1355734-1356004 - 20 1.28e-07 CGGTTAAAAT TACACCCATACATT TATAGTATTT chrIV:229519-229791 + 48 1.28e-07 TCTTACACAA AACATCCGTACATC AGAAGGATTA chrIV:525178-525291 - 19 1.47e-07 ATATTTTCAC AACACCCATACACT ACACCAAAAA chrIV:1062891-1063026 - 49 1.66e-07 GAAAATAAAT AGCACCCACACATC GCATGATGGC chrVIII:125956-126270 + 38 1.97e-07 AAGACGTTAA TGCATCCGTACACC TACATCTTTA chrI:81964-82216 - 70 1.97e-07 AAACTGTTGG TACATCCGTGCACC TCCGCTAGAT chrX:703305-703405 - 42 1.97e-07 GACGCGTGGA AGCACCCATGCATC CACTATTTAT chrIII:163471-163840 - 42 2.97e-07 GTTAAATTAC CGCACCCACGCACC CAACCGCGGC chrXV:79796-80086 - 57 2.97e-07 ACTCCATGTA AACACCCGTACATA TTAAATAAGT chrVII:149147-149499 - 45 3.42e-07 CTGTGCTTAC AGCATCCATACACC CACCCATACA chrII:415513-415870 - 42 3.42e-07 TTTCCTTTTT TACACCCATGCATT TTGTCATCCA chrXII:651000-651249 + 65 3.73e-07 CAATTATCTC AACACCCACACATT TCTCATGGTA chrV:396215-396547 + 47 4.11e-07 CCCTGTTGTA TACATCCGTACACT TTTGTGAACC chrIV:1525345-1525603 - 19 4.11e-07 CACACCACAC CACACCCACACACA CCACACCACA chrVIII:556716-557147 - 9 4.11e-07 ACACCACACC CACACCCACACACA CCACACCC chrXIII:924180-924409 - 78 4.11e-07 CACCCACAC CACACCCACACACA CACACCACAC chrXVI:279914-280258 + 77 4.80e-07 AGGAGAAGTC CGCATCCGTGCACC TCACAATTCC chrV:110565-110808 + 41 5.61e-07 ATGTGACAAA CACACCCAGACACC TCAATAGACA chrXII:262775-263123 + 65 5.61e-07 CATTTAATAA TACATCCATACATT TATGTTAATT chrXIII:224083-224371 - 13 5.61e-07 TACTGAATTT TACATCCATACATT TTTTTGAAAT chrXI:108730-109066 + 72 6.34e-07 AACACATTAC AACATCCGTACATT TAGTTGGCTC chrVII:366099-366438 - 19 6.34e-07 TGATCATATA AACACCCACACATA TCTATAAATC chrIV:1359401-1359768 + 61 6.34e-07 AAAGACATTA AACATCCGTACATT ACGCACCCAT chrXV:161153-161361 - 39 7.16e-07 TTCTGGCAAC CAAACCCATACATC GGGATTCCTA chrXII:241615-241994 + 52 8.03e-07 TTTCCCTTTT TACATCCGTACATA TAAAATGTAA chrXII:921776-921913 - 46 8.03e-07 TGAAGATGTA TGCACCCGTGCCCC CGCTGTAGTA chrVI:223922-224162 - 65 8.03e-07 TGTTTTCTTT TACATCCGTACATA CTCTTAGACC chrXV:678834-679143 - 72 8.03e-07 TTTGGGACCA TACATCCGTACATA TTGTGGACCC chrXVI:731965-732307 + 17 9.13e-07 GCATCGTCAG TACACCCATACCTT TAGGATGGTT chrX:607861-607961 + 42 9.13e-07 ATGCCAACCC TCCATCCATACATC CTTTTTAACC chrXII:522180-522416 + 54 9.13e-07 TTATTAACTA AACATCCGTACACA AAAGGTTTTC chrX:265449-265549 - 43 9.13e-07 GAGTCTTGAT TGCACCCACACCTC GCATTTTGTG chrVIII:148965-149257 - 21 1.03e-06 CCCATACATT TTCACCCATGCACC ATTGGATTAT chrII:45014-45326 + 49 1.03e-06 GAGACAATCA TGCATCCGTACATT CTATGTATGT chrVII:254121-254538 - 68 1.03e-06 TATTTGAGGT TGCACCCGTGCATA TTGAAAGATG chrXII:818815-819176 + 53 1.03e-06 ATACCTTTCC AACATCCGTACATA TTGATTATTG chrIV:130625-130967 - 3 1.16e-06 GACATATACA AACATCCGCACATT TT chrVIII:505845-506153 - 52 1.16e-06 GAGACAATTA TGCATCCATACATT TCACCCAGAC chrIV:1300956-1301315 + 23 1.16e-06 TTTTCCTTCA AACATCCGTGCACT GTGGATGTTT chrIV:358134-358415 - 25 1.29e-06 TGGTGTACAC ACCACCCATACATT ATCTGACAAG chrIV:125341-125685 - 15 1.29e-06 TTTGGGAACT TGAACCCATACACC GCACCAAATT chrXII:1028216-1028536 + 71 1.29e-06 AAGACAAAAT ATCACCCATGCACC AAAATGTATG chrXII:282521-282848 + 22 1.44e-06 GGTGCTTTTT TACACCTGTACATC TTTTCCCTCC chrII:605751-606088 + 46 1.44e-06 CTGACAGTTT TACACCTGTACATC TTCACCATCA chrXII:673818-674237 + 76 1.44e-06 TTAATTTTTT TAGACCCATGCACC AGATATTGAT chrX:75339-75439 - 54 1.44e-06 AATTCCTCTA TACATCCACACCTC ACTATTTGAA chrXII:922175-922539 + 37 1.62e-06 GTTTGAAATT GACACCCGTACATA TTCCAATTCT chrV:13421-13521 + 11 1.62e-06 TTAAGGAAAT GACACCCATACCTC TCAGAAATCC chrVI:221774-222066 - 50 1.81e-06 TAAGACTTTT TTCACCCGTACATT TTTAACACCC chrXVI:188661-188906 + 56 1.81e-06 CGTGACTTTT AAAACCCATGCATC GGTTACTATG chrXV:1025771-1026026 + 27 1.81e-06 ACATATGCTG AACACCCATTCATC ACGTGTAATT chrXV:901512-901663 - 3 1.81e-06 TTCGGGACTG TTCACCCGTACATT TT chrXVI:302649-302975 + 66 2.01e-06 AGCTAACTTG TACATCCAGACATC CTAAAACACC chrXIV:495232-495567 - 29 2.01e-06 GTACACTATA CACACCCAAACCTC CTTTAAAAAT chrVII:534808-535230 - 35 2.01e-06 ATTTTATATA TGCATCCGTGCATT TGTGTAACCC chrVII:788351-788735 - 36 2.01e-06 TATTCCTTAC AACATCCGTGCATA CTCTAAACCC chrXV:505114-505476 + 73 2.21e-06 TGAACCTTAT CACACCCAAACATA TGATATGGTA chrV:423137-423435 + 35 2.21e-06 GCTGCATATT TACCTCCGTACACC TTCTACACCC chrV:140462-140832 - 78 2.21e-06 GACGCACAA AGCACCCATACCTT TTACAATGCC chrIV:321693-321954 + 25 2.21e-06 TTCATACCTT TACCTCCGTACACC AATCTTTATT chrXV:216273-216628 + 50 2.45e-06 ATTTTATCGG AACATCCGAGCACC CGCGCCTTCC chrXV:1004083-1004380 - 66 2.45e-06 AAAAAAAAAA AACACCCTTGCACC CATAACATAC chrXII:48697-49075 - 67 2.71e-06 CATCCCAATG AAGATCCGTACATC TTAGACACCC chrXII:796434-796881 - 27 2.71e-06 TTCTATCTTT TGCATCCGTGCCTC CTGGATAATA chrXII:903501-903598 + 20 2.71e-06 ATAGAAGCAT TGGACCCATGCACC ACATGCATTA chrIV:1401261-1401584 + 60 2.71e-06 CCAATCATTT TCCACCCACACATA TATTACCCTT chrVIII:36104-36357 - 74 2.71e-06 TTATGAAGAA AACACCCAAACATA TCTAGGCCAT chrXV:167963-168419 - 47 2.98e-06 GGCGGCTTTA AACACCCGTGCCTA TATTTAAGTT chrVII:648949-649396 - 27 2.98e-06 GGACATTTTA AACATCCGTACAAC GAGAACCCAT chrXIV:330815-331096 + 44 3.28e-06 TCAGAGATCT TACATCCTTACATC TAAAGTAAAA chrXIV:63134-63571 - 16 3.63e-06 AATACTACTT TACATCCGAACATT TTAGCAACCC chrXV:968202-968307 - 65 3.63e-06 TCGAGCAGCG CACGCCCACGCACC CCACGCTTTT chrXIV:444500-444774 - 34 3.63e-06 TTCTACGGTC TCCATCCGTACCTC TTTAAATCCG chrV:270379-270661 + 16 3.63e-06 AAAAAAATTT ATCACCCATACATA CCACTAAATG chrVII:438594-438879 - 72 3.63e-06 AAAAGACCTT ACCATCCATACATT TTGGAACGTT chrIV:117157-117555 + 63 4.04e-06 GTATTAATCT CAGACCCATACATA TCTACACCCA chrXIII:553025-553155 + 32 4.48e-06 CGTTATTCAT GAGACCCATACATC TCATAGAAAG chrXIV:434555-434899 + 24 4.48e-06 CATCCTTTAA TAAACCCATGCATT AAGATTCGCC chrXII:805502-805744 + 49 4.48e-06 TTGCCTGCTT AACATCCGAACATT TCACATTTTG chrII:60829-61257 - 80 4.48e-06 CTACATT AACATCTGTACACC CCCAACTGCT chrVIII:74950-75405 + 25 4.48e-06 CCTGCAAGTT CACACCTGTACATT TTCTACATCC chrIX:316140-316556 + 53 5.37e-06 TTTTCAGACT AGAACCCATACATT ATTTTACAAA chrX:73387-73487 + 40 5.37e-06 CACATCATTG TACATCCTTGCACC ACACTGAAAA chrXV:866589-866904 - 60 5.37e-06 AAACCGGTGT AACACCCATACAAA CCCAGAATGC chrVII:856769-856935 - 62 5.37e-06 TTTGAGGGTA CCCGCCCATACACC GCACCAATGG chrII:332317-332718 + 57 5.37e-06 ATTTCCTTGC TGCACCCATACAAT TCTAAACCCA chrXVI:172766-173110 + 43 5.88e-06 AACTGGCAAC TAAATCCGTACATT TCTGAAATTA chrXI:618815-619181 - 63 6.48e-06 AAATACTATT TCCATCCGTGCCTC TAATAGATTT chrIV:1450900-1451230 - 68 7.76e-06 TTTAGACATT AACACCTGTACATA TTTGTATTTT chrVII:807759-808103 + 42 7.76e-06 AAAGGGCATG GGGACCCATACATC AGGCACTTAC chrVIII:307994-308338 - 25 8.42e-06 CAAATATTCT AGCATCCAAACATT TGTCAGATAG chrXII:837804-838159 - 3 9.97e-06 TCATCCGACA TACATCTGTACACT AG chrII:604152-604479 + 35 1.09e-05 CGTACATTTA CACATCTGTACATT TTTCATATTC chrX:651244-651344 + 55 1.09e-05 TTTATACAAC AACACCCATATACC CATAATTATT chrXVI:653860-654032 + 44 1.18e-05 AAATTTTCAA AGAATCCGTACATT TAGAAATTTT chrIV:308029-308379 + 69 1.27e-05 CATTTCCTGT TACATCCTTACATA TATGCAGGCA chrXV:253833-254086 - 69 1.27e-05 CAAAACTTTT TTAATCCGTACACC GCGCGTATAA chrXVI:699983-700321 + 66 1.27e-05 CCCACAAGTG ATCCCCCACACACC ATAGCTTCAA chrVII:228543-228774 + 20 1.27e-05 AATTAAAAAA TAAACCCAAACATT TCTGGAAAAC chrIV:579067-579399 + 42 1.38e-05 AACCATAAAG TAGACCCAAACATT TTTAAAAAAA chrIX:99677-99989 - 27 1.50e-05 TACACCATGT AACACCAGTACATT TATTCATGAA chrXIV:241407-241687 + 65 1.62e-05 CCCAACATCC AGCACCTAAACACC ATCAATACAC chrVIII:296937-297178 + 49 1.74e-05 CACAATTTCG TCCACCAGTACATC ACAGCATGCT chrXVI:520208-520496 + 61 1.87e-05 GCCTGAGTGT TCCACCCAGGCCTC GCCGGAGGAA chrIV:490947-491258 + 78 2.01e-05 CCTATTTTAT TACACCCAATCATT CAGGAAAAA chrV:362186-362473 + 70 2.17e-05 CCAAGAAATT TAAACCCATACAAT ATATTTCAAT chrIX:28-179 + 12 2.17e-05 ACCCACACAC CACACCCACACCAA CTCTCTCTCA chrX:90089-90189 + 60 2.17e-05 CCTGGACATT CTCACCCATACATG GCCTTGTTTT chrXV:978858-979108 - 5 2.33e-05 GCGGTGTCGT AGAACCCATTCATC CTTG chrII:167881-168183 + 52 2.68e-05 ACAGTGTTTT AAAACCCAGACATA TTTTTCACCA chrXI:118232-118576 + 73 3.08e-05 AATGTGCCAT AAACTCCGTGCACC ACACTAGCCT chrXV:281942-282355 - 35 3.54e-05 TGTTATCCTG AGCATCCACTCCTC TATTTAAGCG chrXII:1019021-1019364 - 1 4.05e-05 CGGAAACGTT GAAACCCAAACATT chrII:165146-165348 + 59 4.94e-05 TATTACGAAT CTAGCCCATACACC GCGTTAGAGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HACAYCCRTACAYY MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXVI:866539-866643 7.7e-09 46_[-3]_40 chrXIII:296792-297188 1.4e-08 24_[+3]_62 chrVIII:382959-383335 1.4e-08 3_[-3]_83 chrXIV:6584-6822 2.8e-08 10_[+3]_76 chrXII:5503-5861 2.8e-08 32_[+3]_54 chrXI:666492-666771 2.8e-08 30_[-3]_56 chrXIV:783919-784154 2.8e-08 73_[-3]_13 chrXV:35-216 2.8e-08 10_[+3]_76 chrV:6188-6543 2.8e-08 32_[+3]_54 chrXII:1064912-1065323 2.8e-08 25_[-3]_61 chrIII:34-321 2.8e-08 8_[+3]_78 chrVIII:562330-562607 2.8e-08 47_[-3]_39 chrVI:4490-4942 2.8e-08 37_[+3]_49 chrXI:614107-614451 3.8e-08 72_[+3]_14 chrXVI:404594-404765 4.7e-08 75_[+3]_11 chrXIII:145894-146255 7.6e-08 58_[+3]_28 chrII:89668-89946 7.6e-08 43_[-3]_43 chrXIII:650835-651126 1e-07 49_[+3]_37 chrVI:95533-95791 1e-07 23_[-3]_63 chrXI:431317-431646 1e-07 61_[+3]_25 chrXII:710594-710938 1.3e-07 15_[+3]_71 chrIV:1355734-1356004 1.3e-07 19_[-3]_67 chrIV:229519-229791 1.3e-07 47_[+3]_39 chrIV:525178-525291 1.5e-07 18_[-3]_68 chrIV:1062891-1063026 1.7e-07 48_[-3]_38 chrVIII:125956-126270 2e-07 37_[+3]_49 chrI:81964-82216 2e-07 69_[-3]_17 chrX:703305-703405 2e-07 41_[-3]_45 chrIII:163471-163840 3e-07 41_[-3]_45 chrXV:79796-80086 3e-07 56_[-3]_30 chrVII:149147-149499 3.4e-07 44_[-3]_42 chrII:415513-415870 3.4e-07 41_[-3]_45 chrXII:651000-651249 3.7e-07 64_[+3]_22 chrV:396215-396547 4.1e-07 46_[+3]_40 chrIV:1525345-1525603 4.1e-07 18_[-3]_68 chrVIII:556716-557147 4.1e-07 8_[-3]_78 chrXIII:924180-924409 4.1e-07 77_[-3]_9 chrXVI:279914-280258 4.8e-07 76_[+3]_10 chrV:110565-110808 5.6e-07 40_[+3]_46 chrXII:262775-263123 5.6e-07 64_[+3]_22 chrXIII:224083-224371 5.6e-07 12_[-3]_74 chrXI:108730-109066 6.3e-07 71_[+3]_15 chrVII:366099-366438 6.3e-07 18_[-3]_68 chrIV:1359401-1359768 6.3e-07 60_[+3]_26 chrXV:161153-161361 7.2e-07 38_[-3]_48 chrXII:241615-241994 8e-07 51_[+3]_35 chrXII:921776-921913 8e-07 45_[-3]_41 chrVI:223922-224162 8e-07 64_[-3]_22 chrXV:678834-679143 8e-07 71_[-3]_15 chrXVI:731965-732307 9.1e-07 16_[+3]_70 chrX:607861-607961 9.1e-07 41_[+3]_45 chrXII:522180-522416 9.1e-07 53_[+3]_33 chrX:265449-265549 9.1e-07 42_[-3]_44 chrVIII:148965-149257 1e-06 20_[-3]_66 chrII:45014-45326 1e-06 48_[+3]_38 chrVII:254121-254538 1e-06 67_[-3]_19 chrXII:818815-819176 1e-06 52_[+3]_34 chrIV:130625-130967 1.2e-06 2_[-3]_84 chrVIII:505845-506153 1.2e-06 51_[-3]_35 chrIV:1300956-1301315 1.2e-06 22_[+3]_64 chrIV:358134-358415 1.3e-06 24_[-3]_62 chrIV:125341-125685 1.3e-06 14_[-3]_72 chrXII:1028216-1028536 1.3e-06 70_[+3]_16 chrXII:282521-282848 1.4e-06 21_[+3]_65 chrII:605751-606088 1.4e-06 45_[+3]_41 chrXII:673818-674237 1.4e-06 75_[+3]_11 chrX:75339-75439 1.4e-06 53_[-3]_33 chrXII:922175-922539 1.6e-06 36_[+3]_50 chrV:13421-13521 1.6e-06 10_[+3]_76 chrVI:221774-222066 1.8e-06 49_[-3]_37 chrXVI:188661-188906 1.8e-06 55_[+3]_31 chrXV:1025771-1026026 1.8e-06 26_[+3]_60 chrXV:901512-901663 1.8e-06 2_[-3]_84 chrXVI:302649-302975 2e-06 65_[+3]_21 chrXIV:495232-495567 2e-06 28_[-3]_58 chrVII:534808-535230 2e-06 34_[-3]_52 chrVII:788351-788735 2e-06 35_[-3]_51 chrXV:505114-505476 2.2e-06 72_[+3]_14 chrV:423137-423435 2.2e-06 34_[+3]_52 chrV:140462-140832 2.2e-06 77_[-3]_9 chrIV:321693-321954 2.2e-06 24_[+3]_62 chrXV:216273-216628 2.4e-06 49_[+3]_37 chrXV:1004083-1004380 2.4e-06 65_[-3]_21 chrXII:48697-49075 2.7e-06 66_[-3]_20 chrXII:796434-796881 2.7e-06 26_[-3]_60 chrXII:903501-903598 2.7e-06 19_[+3]_64 chrIV:1401261-1401584 2.7e-06 59_[+3]_27 chrVIII:36104-36357 2.7e-06 73_[-3]_13 chrXV:167963-168419 3e-06 46_[-3]_40 chrVII:648949-649396 3e-06 26_[-3]_60 chrXIV:330815-331096 3.3e-06 43_[+3]_43 chrXIV:63134-63571 3.6e-06 15_[-3]_71 chrXV:968202-968307 3.6e-06 64_[-3]_22 chrXIV:444500-444774 3.6e-06 33_[-3]_53 chrV:270379-270661 3.6e-06 15_[+3]_71 chrVII:438594-438879 3.6e-06 71_[-3]_15 chrIV:117157-117555 4e-06 62_[+3]_24 chrXIII:553025-553155 4.5e-06 31_[+3]_55 chrXIV:434555-434899 4.5e-06 23_[+3]_63 chrXII:805502-805744 4.5e-06 48_[+3]_38 chrII:60829-61257 4.5e-06 79_[-3]_7 chrVIII:74950-75405 4.5e-06 24_[+3]_62 chrIX:316140-316556 5.4e-06 52_[+3]_34 chrX:73387-73487 5.4e-06 39_[+3]_47 chrXV:866589-866904 5.4e-06 59_[-3]_27 chrVII:856769-856935 5.4e-06 61_[-3]_25 chrII:332317-332718 5.4e-06 56_[+3]_30 chrXVI:172766-173110 5.9e-06 42_[+3]_44 chrXI:618815-619181 6.5e-06 62_[-3]_24 chrIV:1450900-1451230 7.8e-06 67_[-3]_19 chrVII:807759-808103 7.8e-06 41_[+3]_45 chrVIII:307994-308338 8.4e-06 24_[-3]_62 chrXII:837804-838159 1e-05 2_[-3]_84 chrII:604152-604479 1.1e-05 34_[+3]_52 chrX:651244-651344 1.1e-05 54_[+3]_32 chrXVI:653860-654032 1.2e-05 43_[+3]_43 chrIV:308029-308379 1.3e-05 68_[+3]_18 chrXV:253833-254086 1.3e-05 68_[-3]_18 chrXVI:699983-700321 1.3e-05 65_[+3]_21 chrVII:228543-228774 1.3e-05 19_[+3]_67 chrIV:579067-579399 1.4e-05 41_[+3]_45 chrIX:99677-99989 1.5e-05 26_[-3]_60 chrXIV:241407-241687 1.6e-05 64_[+3]_22 chrVIII:296937-297178 1.7e-05 48_[+3]_38 chrXVI:520208-520496 1.9e-05 60_[+3]_26 chrIV:490947-491258 2e-05 77_[+3]_9 chrV:362186-362473 2.2e-05 69_[+3]_17 chrIX:28-179 2.2e-05 11_[+3]_75 chrX:90089-90189 2.2e-05 59_[+3]_27 chrXV:978858-979108 2.3e-05 4_[-3]_82 chrII:167881-168183 2.7e-05 51_[+3]_35 chrXI:118232-118576 3.1e-05 72_[+3]_14 chrXV:281942-282355 3.5e-05 34_[-3]_52 chrXII:1019021-1019364 4e-05 [-3]_86 chrII:165146-165348 4.9e-05 58_[+3]_28 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HACAYCCRTACAYY MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF HACAYCCRTACAYY width=14 seqs=135 chrXVI:866539-866643 ( 47) TACACCCATACACC 1 chrXIII:296792-297188 ( 25) CACACCCATACATC 1 chrVIII:382959-383335 ( 4) TACACCCATACATC 1 chrXIV:6584-6822 ( 11) CACACCCACACACC 1 chrXII:5503-5861 ( 33) CACACCCACACACC 1 chrXI:666492-666771 ( 31) CACACCCACACACC 1 chrXIV:783919-784154 ( 74) CACACCCACACACC 1 chrXV:35-216 ( 11) CACACCCACACACC 1 chrV:6188-6543 ( 33) CACACCCACACACC 1 chrXII:1064912-1065323 ( 26) CACACCCACACACC 1 chrIII:34-321 ( 9) CACACCCACACACC 1 chrVIII:562330-562607 ( 48) CACACCCACACACC 1 chrVI:4490-4942 ( 38) CACACCCACACACC 1 chrXI:614107-614451 ( 73) AACACCCGCACACC 1 chrXVI:404594-404765 ( 76) CACACCCATGCATC 1 chrXIII:145894-146255 ( 59) TACATCCATACACC 1 chrII:89668-89946 ( 44) TACATCCATACACC 1 chrXIII:650835-651126 ( 50) TACACCCGTACATT 1 chrVI:95533-95791 ( 24) TGCACCCACACACC 1 chrXI:431317-431646 ( 62) TACACCCATACACT 1 chrXII:710594-710938 ( 16) CACACCCACGCATC 1 chrIV:1355734-1356004 ( 20) TACACCCATACATT 1 chrIV:229519-229791 ( 48) AACATCCGTACATC 1 chrIV:525178-525291 ( 19) AACACCCATACACT 1 chrIV:1062891-1063026 ( 49) AGCACCCACACATC 1 chrVIII:125956-126270 ( 38) TGCATCCGTACACC 1 chrI:81964-82216 ( 70) TACATCCGTGCACC 1 chrX:703305-703405 ( 42) AGCACCCATGCATC 1 chrIII:163471-163840 ( 42) CGCACCCACGCACC 1 chrXV:79796-80086 ( 57) AACACCCGTACATA 1 chrVII:149147-149499 ( 45) AGCATCCATACACC 1 chrII:415513-415870 ( 42) TACACCCATGCATT 1 chrXII:651000-651249 ( 65) AACACCCACACATT 1 chrV:396215-396547 ( 47) TACATCCGTACACT 1 chrIV:1525345-1525603 ( 19) CACACCCACACACA 1 chrVIII:556716-557147 ( 9) CACACCCACACACA 1 chrXIII:924180-924409 ( 78) CACACCCACACACA 1 chrXVI:279914-280258 ( 77) CGCATCCGTGCACC 1 chrV:110565-110808 ( 41) CACACCCAGACACC 1 chrXII:262775-263123 ( 65) TACATCCATACATT 1 chrXIII:224083-224371 ( 13) TACATCCATACATT 1 chrXI:108730-109066 ( 72) AACATCCGTACATT 1 chrVII:366099-366438 ( 19) AACACCCACACATA 1 chrIV:1359401-1359768 ( 61) AACATCCGTACATT 1 chrXV:161153-161361 ( 39) CAAACCCATACATC 1 chrXII:241615-241994 ( 52) TACATCCGTACATA 1 chrXII:921776-921913 ( 46) TGCACCCGTGCCCC 1 chrVI:223922-224162 ( 65) TACATCCGTACATA 1 chrXV:678834-679143 ( 72) TACATCCGTACATA 1 chrXVI:731965-732307 ( 17) TACACCCATACCTT 1 chrX:607861-607961 ( 42) TCCATCCATACATC 1 chrXII:522180-522416 ( 54) AACATCCGTACACA 1 chrX:265449-265549 ( 43) TGCACCCACACCTC 1 chrVIII:148965-149257 ( 21) TTCACCCATGCACC 1 chrII:45014-45326 ( 49) TGCATCCGTACATT 1 chrVII:254121-254538 ( 68) TGCACCCGTGCATA 1 chrXII:818815-819176 ( 53) AACATCCGTACATA 1 chrIV:130625-130967 ( 3) AACATCCGCACATT 1 chrVIII:505845-506153 ( 52) TGCATCCATACATT 1 chrIV:1300956-1301315 ( 23) AACATCCGTGCACT 1 chrIV:358134-358415 ( 25) ACCACCCATACATT 1 chrIV:125341-125685 ( 15) TGAACCCATACACC 1 chrXII:1028216-1028536 ( 71) ATCACCCATGCACC 1 chrXII:282521-282848 ( 22) TACACCTGTACATC 1 chrII:605751-606088 ( 46) TACACCTGTACATC 1 chrXII:673818-674237 ( 76) TAGACCCATGCACC 1 chrX:75339-75439 ( 54) TACATCCACACCTC 1 chrXII:922175-922539 ( 37) GACACCCGTACATA 1 chrV:13421-13521 ( 11) GACACCCATACCTC 1 chrVI:221774-222066 ( 50) TTCACCCGTACATT 1 chrXVI:188661-188906 ( 56) AAAACCCATGCATC 1 chrXV:1025771-1026026 ( 27) AACACCCATTCATC 1 chrXV:901512-901663 ( 3) TTCACCCGTACATT 1 chrXVI:302649-302975 ( 66) TACATCCAGACATC 1 chrXIV:495232-495567 ( 29) CACACCCAAACCTC 1 chrVII:534808-535230 ( 35) TGCATCCGTGCATT 1 chrVII:788351-788735 ( 36) AACATCCGTGCATA 1 chrXV:505114-505476 ( 73) CACACCCAAACATA 1 chrV:423137-423435 ( 35) TACCTCCGTACACC 1 chrV:140462-140832 ( 78) AGCACCCATACCTT 1 chrIV:321693-321954 ( 25) TACCTCCGTACACC 1 chrXV:216273-216628 ( 50) AACATCCGAGCACC 1 chrXV:1004083-1004380 ( 66) AACACCCTTGCACC 1 chrXII:48697-49075 ( 67) AAGATCCGTACATC 1 chrXII:796434-796881 ( 27) TGCATCCGTGCCTC 1 chrXII:903501-903598 ( 20) TGGACCCATGCACC 1 chrIV:1401261-1401584 ( 60) TCCACCCACACATA 1 chrVIII:36104-36357 ( 74) AACACCCAAACATA 1 chrXV:167963-168419 ( 47) AACACCCGTGCCTA 1 chrVII:648949-649396 ( 27) AACATCCGTACAAC 1 chrXIV:330815-331096 ( 44) TACATCCTTACATC 1 chrXIV:63134-63571 ( 16) TACATCCGAACATT 1 chrXV:968202-968307 ( 65) CACGCCCACGCACC 1 chrXIV:444500-444774 ( 34) TCCATCCGTACCTC 1 chrV:270379-270661 ( 16) ATCACCCATACATA 1 chrVII:438594-438879 ( 72) ACCATCCATACATT 1 chrIV:117157-117555 ( 63) CAGACCCATACATA 1 chrXIII:553025-553155 ( 32) GAGACCCATACATC 1 chrXIV:434555-434899 ( 24) TAAACCCATGCATT 1 chrXII:805502-805744 ( 49) AACATCCGAACATT 1 chrII:60829-61257 ( 80) AACATCTGTACACC 1 chrVIII:74950-75405 ( 25) CACACCTGTACATT 1 chrIX:316140-316556 ( 53) AGAACCCATACATT 1 chrX:73387-73487 ( 40) TACATCCTTGCACC 1 chrXV:866589-866904 ( 60) AACACCCATACAAA 1 chrVII:856769-856935 ( 62) CCCGCCCATACACC 1 chrII:332317-332718 ( 57) TGCACCCATACAAT 1 chrXVI:172766-173110 ( 43) TAAATCCGTACATT 1 chrXI:618815-619181 ( 63) TCCATCCGTGCCTC 1 chrIV:1450900-1451230 ( 68) AACACCTGTACATA 1 chrVII:807759-808103 ( 42) GGGACCCATACATC 1 chrVIII:307994-308338 ( 25) AGCATCCAAACATT 1 chrXII:837804-838159 ( 3) TACATCTGTACACT 1 chrII:604152-604479 ( 35) CACATCTGTACATT 1 chrX:651244-651344 ( 55) AACACCCATATACC 1 chrXVI:653860-654032 ( 44) AGAATCCGTACATT 1 chrIV:308029-308379 ( 69) TACATCCTTACATA 1 chrXV:253833-254086 ( 69) TTAATCCGTACACC 1 chrXVI:699983-700321 ( 66) ATCCCCCACACACC 1 chrVII:228543-228774 ( 20) TAAACCCAAACATT 1 chrIV:579067-579399 ( 42) TAGACCCAAACATT 1 chrIX:99677-99989 ( 27) AACACCAGTACATT 1 chrXIV:241407-241687 ( 65) AGCACCTAAACACC 1 chrVIII:296937-297178 ( 49) TCCACCAGTACATC 1 chrXVI:520208-520496 ( 61) TCCACCCAGGCCTC 1 chrIV:490947-491258 ( 78) TACACCCAATCATT 1 chrV:362186-362473 ( 70) TAAACCCATACAAT 1 chrIX:28-179 ( 12) CACACCCACACCAA 1 chrX:90089-90189 ( 60) CTCACCCATACATG 1 chrXV:978858-979108 ( 5) AGAACCCATTCATC 1 chrII:167881-168183 ( 52) AAAACCCAGACATA 1 chrXI:118232-118576 ( 73) AAACTCCGTGCACC 1 chrXV:281942-282355 ( 35) AGCATCCACTCCTC 1 chrXII:1019021-1019364 ( 1) GAAACCCAAACATT 1 chrII:165146-165348 ( 59) CTAGCCCATACACC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HACAYCCRTACAYY MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 14 n= 52064 bayes= 10.6053 E= 3.5e-192 1 34 -225 36 107 -140 7 -228 -154 225 -176 -1372 155 -257 -298 -1372 -1372 186 -1372 16 -1372 251 -1372 -1372 -445 240 -1372 -245 91 -1372 104 -345 -187 24 -257 106 125 -1372 18 -345 -1372 250 -1372 -545 147 -76 -1372 -1372 -313 107 -1372 87 -87 158 -457 -17 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HACAYCCRTACAYY MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 14 nsites= 135 E= 3.5e-192 0.325926 0.222222 0.037037 0.414815 0.681481 0.066667 0.185185 0.066667 0.111111 0.837037 0.051852 0.000000 0.948148 0.029630 0.022222 0.000000 0.000000 0.637037 0.000000 0.362963 0.000000 1.000000 0.000000 0.000000 0.014815 0.925926 0.000000 0.059259 0.607407 0.000000 0.362963 0.029630 0.088889 0.207407 0.029630 0.674074 0.770370 0.000000 0.200000 0.029630 0.000000 0.992593 0.000000 0.007407 0.896296 0.103704 0.000000 0.000000 0.037037 0.370370 0.000000 0.592593 0.177778 0.525926 0.007407 0.288889 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HACAYCCRTACAYY MEME-3 regular expression -------------------------------------------------------------------------------- [TAC]ACA[CT]CC[AG][TC][AG]CA[TC][CT] -------------------------------------------------------------------------------- Time 988.51 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:75339-75439 4.80e-03 53_[-3(1.44e-06)]_33 chrXII:734676-735001 1.31e-14 21_[-1(2.46e-10)]_9_[-2(3.48e-12)]_\ 24 chrXVI:279713-280057 8.24e-01 100 chrIV:229519-229791 9.09e-04 23_[+3(3.63e-06)]_10_[+3(1.28e-07)]_\ 39 chrXVI:718497-718841 7.43e-01 100 chrVIII:74950-75405 2.01e-02 24_[+3(4.48e-06)]_62 chrXV:678834-679143 1.15e-04 7_[+1(6.87e-05)]_44_[-3(8.03e-07)]_\ 15 chrVII:317052-317396 7.26e-01 100 chrXIV:291848-292192 5.87e-01 100 chrVII:779403-779821 2.09e-01 100 chrXIII:224083-224371 1.37e-03 12_[-3(5.61e-07)]_11_[-3(9.16e-06)]_\ 49 chrX:228132-228232 3.01e-01 100 chrX:58970-59070 3.24e-13 1_[+2(3.49e-10)]_8_[+1(9.38e-11)]_\ 45 chrVI:4490-4942 8.31e-05 22_[+3(4.11e-07)]_1_[+3(2.78e-08)]_\ [+3(2.78e-08)]_10_[+3(2.78e-08)]_11 chrIII:29709-30053 8.86e-01 100 chrX:703305-703405 8.16e-04 41_[-3(1.97e-07)]_45 chrIV:1489338-1489541 8.15e-01 100 chrXI:431317-431646 9.63e-04 61_[+3(1.03e-07)]_25 chrIV:45898-46242 4.48e-01 100 chrV:354719-355163 1.23e-01 100 chrXIII:652693-652785 2.68e-01 92 chrII:266204-266658 3.24e-13 4_[-1(9.38e-11)]_8_[-2(3.49e-10)]_\ 42 chrVII:648949-649396 1.20e-02 11_[-3(5.37e-06)]_1_[-3(2.98e-06)]_\ 60 chrXIV:229910-230070 6.48e-01 100 chrXII:122222-122566 6.01e-01 100 chrIV:1355734-1356004 9.62e-04 19_[-3(1.28e-07)]_10_[-3(7.16e-07)]_\ 43 chrIV:1355080-1355424 6.68e-01 100 chrXI:26250-26418 4.16e-01 100 chrIV:321693-321954 7.60e-03 24_[+3(2.21e-06)]_12_[+3(1.09e-05)]_\ 36 chrVII:437232-437576 1.00e+00 100 chrXI:614107-614451 5.21e-05 72_[+3(3.80e-08)]_14 chrXVI:819323-819740 3.52e-06 55_[-1(2.46e-10)]_25 chrIX:99061-99405 7.51e-01 100 chrII:60829-61257 1.01e-02 79_[-3(4.48e-06)]_7 chrXVI:622480-622818 1.12e-06 4_[+1(3.81e-08)]_76 chrXVI:514299-514643 9.95e-01 100 chrXVI:769004-769473 2.82e-08 29_[+2(7.15e-11)]_45 chrXVI:378059-378403 4.70e-01 100 chrVI:204806-205160 9.07e-14 1_[+2(9.09e-11)]_8_[+1(2.46e-10)]_\ [-2(8.89e-05)]_19 chrVII:346159-346503 8.67e-01 100 chrXIII:267887-268260 1.00e+00 100 chrIV:323031-323289 8.39e-01 100 chrII:89668-89946 5.38e-04 23_[-3(4.04e-06)]_6_[-3(7.56e-08)]_\ 43 chrIV:619777-620207 2.99e-10 37_[+2(1.05e-09)]_8_[+1(4.11e-08)]_\ 9 chrX:121690-121790 3.40e-01 100 chrXII:198521-198865 7.54e-01 100 chrIX:67369-67713 7.43e-01 100 chrXI:591205-591549 9.97e-01 100 chrVIII:146049-146477 2.85e-13 39_[+2(9.09e-11)]_8_[+1(2.46e-10)]_\ 7 chrVI:84168-84512 9.48e-01 100 chrIV:322215-322559 8.03e-01 100 chrIV:579067-579399 6.84e-03 41_[+3(1.38e-05)]_45 chrXII:637154-637498 3.98e-01 100 chrXIV:624579-624923 5.50e-01 100 chrVIII:296937-297178 7.16e-03 48_[+3(1.74e-05)]_38 chrVIII:382959-383335 5.50e-06 3_[-3(1.43e-08)]_3_[-3(5.88e-06)]_\ 66 chrVIII:36104-36357 3.50e-03 73_[-3(2.71e-06)]_13 chrXV:710009-710376 3.25e-01 100 chrII:681351-681695 9.61e-01 100 chrX:354050-354150 9.28e-01 100 chrXV:901512-901663 4.90e-03 2_[-3(1.81e-06)]_84 chrXIV:576979-577323 8.00e-01 100 chrII:479048-479392 9.68e-01 100 chrM:61815-62159 6.52e-01 100 chrVI:95533-95791 1.64e-05 23_[-3(1.03e-07)]_63 chrVII:828489-828985 4.53e-07 46_[+2(1.02e-10)]_28 chrV:311930-312269 4.71e-09 18_[+1(4.93e-11)]_26_[+2(5.52e-05)]_\ 10 chrXV:621480-621597 9.93e-01 100 chrIV:1240749-1241093 8.26e-01 100 chrII:375515-375859 1.00e+00 100 chrXII:441461-441547 9.87e-01 86 chrXI:219724-220095 1.94e-13 43_[-1(2.46e-10)]_8_[-2(9.09e-11)]_\ 3 chrIV:579717-580018 7.55e-01 100 chrXVI:653860-654032 1.91e-02 43_[+3(1.18e-05)]_43 chrV:13421-13521 3.53e-03 10_[+3(1.62e-06)]_76 chrX:651244-651344 2.55e-02 54_[+3(1.09e-05)]_11_[+3(2.17e-05)]_\ 7 chrV:487213-487567 4.22e-10 1_[+2(6.62e-13)]_73 chrVII:25417-25761 8.67e-01 100 chrXII:793744-794113 1.02e-05 74_[-2(7.96e-09)] chrII:169248-169592 9.96e-01 100 chrIV:1461639-1462046 1.22e-04 9_[+1(2.37e-08)]_71 chrII:680864-681208 5.21e-01 100 chrXII:962916-963281 4.04e-01 100 chrVII:482659-483003 1.00e+00 100 chrV:99956-100352 8.72e-05 14_[-1(4.04e-05)]_29_[-2(4.83e-06)]_\ 11 chrX:435982-436082 2.68e-01 100 chrVIII:411408-411752 7.11e-01 100 chrXIV:716265-716432 9.61e-01 100 chrXI:118232-118576 1.55e-02 72_[+3(3.08e-05)]_14 chrVI:223922-224162 2.92e-03 64_[-3(8.03e-07)]_22 chrXIII:372342-372724 1.78e-04 7_[+1(4.11e-08)]_73 chrXV:160560-160707 9.78e-01 100 chrXI:393389-393733 6.16e-01 100 chrIV:645072-645382 1.78e-02 100 chrX:265449-265549 5.26e-05 42_[-3(9.13e-07)]_44 chrXV:281942-282355 1.50e-03 34_[-3(3.54e-05)]_25_[-1(9.34e-05)]_\ 7 chrXII:374184-374644 3.35e-06 26_[-2(1.05e-09)]_48 chrIV:1401261-1401584 9.39e-03 44_[+3(2.33e-05)]_1_[+3(2.71e-06)]_\ 27 chrV:528306-528650 3.71e-01 100 chrXV:978858-979108 1.55e-03 4_[-3(2.33e-05)]_82 chrIV:980870-981251 6.57e-06 17_[+1(7.57e-10)]_63 chrVII:481029-481373 3.06e-01 100 chrXI:118463-118807 6.40e-02 100 chrVII:227563-227907 8.86e-01 100 chrXV:622157-622291 8.72e-01 100 chrXII:818815-819176 3.31e-03 52_[+3(1.03e-06)]_34 chrXI:46689-46978 4.22e-01 100 chrXVI:173496-173840 4.59e-02 100 chrXI:208612-208956 9.26e-01 100 chrIX:110612-110956 8.27e-01 100 chrXII:232321-232445 2.29e-01 100 chrXIV:442842-443254 1.80e-04 15_[-1(2.37e-08)]_65 chrVI:167275-167641 4.92e-02 36_[-1(5.41e-05)]_44 chrX:541304-541404 7.96e-01 100 chrII:415513-415870 1.13e-03 25_[-3(8.51e-05)]_2_[-3(3.42e-07)]_\ 45 chrVI:83187-83531 9.09e-02 100 chrIII:137567-137911 7.47e-01 100 chrXII:232471-232815 2.81e-01 100 chrVII:254121-254538 2.10e-03 47_[+3(1.44e-06)]_6_[-3(1.03e-06)]_\ 19 chrXV:966210-966554 7.95e-01 100 chrXI:513265-513637 3.05e-01 100 chrIX:316779-317123 9.58e-01 100 chrXIII:650835-651126 5.30e-04 49_[+3(1.03e-07)]_37 chrVII:438594-438879 7.75e-03 48_[-3(6.48e-06)]_9_[-3(3.63e-06)]_\ 15 chrXVI:860205-860531 5.79e-02 68_[-1(9.34e-05)]_12 chrV:492179-492584 2.99e-10 31_[+2(1.05e-09)]_8_[+1(4.11e-08)]_\ 15 chrXV:1016978-1017322 6.79e-01 100 chrIX:317920-318264 6.35e-01 100 chrXII:152186-152530 9.18e-01 100 chrM:59538-59685 4.48e-01 100 chrXIII:420514-420863 1.78e-02 3_[+1(9.97e-05)]_77 chrXVI:280828-281060 5.74e-01 100 chrII:301196-301540 7.34e-02 100 chrIV:1524663-1524826 9.60e-01 100 chrXV:464247-464579 9.00e-01 100 chrIX:256784-257128 5.79e-01 100 chrXIV:613198-613542 3.57e-01 100 chrIV:802594-802990 1.64e-02 100 chrXVI:581895-582227 1.28e-05 58_[-1(7.03e-09)]_22 chrIII:292643-292884 4.28e-01 100 chrXII:921776-921913 1.66e-03 23_[-3(4.34e-05)]_8_[-3(8.03e-07)]_\ 41 chrXIII:747780-748164 6.86e-01 100 chrXIV:585907-586158 6.00e-01 100 chrXII:1028878-1029222 8.85e-01 100 chrXIII:298432-298822 4.48e-01 100 chrV:139699-140043 4.69e-01 100 chrVIII:562330-562607 8.28e-05 47_[-3(2.78e-08)]_17_[-3(2.78e-08)]_\ 8 chrXII:369362-369624 9.91e-01 100 chrXVI:866539-866643 8.22e-06 46_[-3(7.70e-09)]_40 chrXI:84012-84324 1.67e-01 100 chrXV:631787-632131 5.52e-01 100 chrXV:663649-664050 1.97e-09 23_[+2(1.42e-08)]_9_[+1(4.11e-08)]_\ 22 chrII:395018-395362 8.12e-01 100 chrII:556174-556288 6.03e-01 100 chrV:288384-288688 4.48e-07 10_[+1(1.16e-10)]_70 chrXIII:296792-297188 2.34e-05 24_[+3(1.43e-08)]_62 chrXII:262775-263123 2.55e-03 44_[+3(3.08e-05)]_6_[+3(5.61e-07)]_\ 22 chrXV:1025771-1026026 3.36e-03 26_[+3(1.81e-06)]_60 chrVII:878647-879000 6.81e-01 100 chrXII:1028216-1028536 9.31e-03 70_[+3(1.29e-06)]_2_[-3(2.01e-05)] chrVII:422931-423298 2.72e-05 35_[-1(2.37e-08)]_45 chrXII:899378-899516 2.89e-01 100 chrIV:1150662-1151146 5.28e-07 59_[+1(2.04e-10)]_21 chrIV:490947-491258 5.15e-02 77_[+3(2.01e-05)]_9 chrIII:34-321 8.28e-05 8_[+3(2.78e-08)]_16_[+3(4.11e-07)]_\ 23_[+3(2.78e-08)]_11 chrV:207143-207561 3.46e-01 100 chrXIII:887538-887882 1.92e-01 100 chrXII:1064912-1065323 7.53e-05 25_[-3(2.78e-08)]_12_[-3(2.21e-06)]_\ 4_[-3(2.21e-06)]_17 chrX:90089-90189 3.51e-02 45_[+3(4.05e-05)]_[+3(2.17e-05)]_27 chrXI:461426-461770 1.26e-02 100 chrXIV:602192-602419 1.22e-06 64_[-1(2.46e-10)]_16 chrIV:218328-218672 4.08e-01 100 chrIV:1300956-1301315 4.70e-03 22_[+3(1.16e-06)]_3_[-3(2.01e-05)]_\ 47 chrIV:117861-118205 9.32e-01 100 chrXIII:924180-924409 1.59e-03 58_[-3(1.44e-06)]_5_[-3(4.11e-07)]_\ 9 chrXV:725185-725529 6.96e-01 100 chrXIII:91827-92055 6.59e-01 100 chrXI:329759-330103 9.98e-01 100 chrXIV:569848-570058 1.81e-06 9_[+1(2.46e-10)]_71 chrVII:440514-441018 8.40e-11 10_[+2(4.62e-09)]_27_[+1(3.81e-08)]_\ 17 chrIII:14605-14705 5.56e-01 100 chrXIII:888962-889306 3.57e-01 100 chrXVI:572069-572475 1.97e-02 54_[-1(9.34e-05)]_26 chrXII:214761-215125 5.77e-15 [+2(1.73e-11)]_8_[+1(4.93e-11)]_46 chrXII:366075-366448 1.03e-01 71_[+2(6.72e-05)]_3 chrXII:720555-720899 8.72e-01 100 chrIV:1062891-1063026 8.80e-05 48_[-3(1.66e-07)]_38 chrII:332317-332718 9.88e-03 56_[+3(5.37e-06)]_2_[+3(8.03e-05)]_\ 14 chrXII:84210-84430 3.06e-01 100 chrXV:159479-159615 5.27e-02 100 chrVIII:386568-386912 3.96e-01 100 chrXV:274515-274911 8.85e-08 17_[-1(2.04e-10)]_63 chrXV:900858-901202 3.92e-01 100 chrXII:283589-283680 9.82e-01 91 chrVII:439298-439642 5.99e-01 100 chrV:270379-270661 5.88e-03 15_[+3(3.63e-06)]_25_[+3(2.17e-05)]_\ 32 chrVII:807759-808103 1.27e-03 41_[+3(7.76e-06)]_45 chrVII:700511-701253 9.61e-01 100 chrVII:73736-74083 1.95e-04 15_[+1(4.11e-08)]_65 chrXVI:338819-339047 1.25e-01 100 chrX:418772-418872 9.37e-01 100 chrXIII:503261-503605 3.50e-01 100 chrI:166056-166477 4.76e-08 58_[-1(4.93e-11)]_22 chrXV:964062-964406 8.81e-01 100 chrX:204521-204621 5.98e-01 100 chrXII:713110-713532 7.59e-01 100 chrVII:788351-788735 8.75e-03 18_[-3(8.51e-05)]_3_[-3(2.01e-06)]_\ 51 chrXV:161153-161361 2.30e-03 38_[-3(7.16e-07)]_48 chrVIII:62573-62937 3.46e-01 100 chrXI:642602-642946 5.83e-01 100 chrX:436181-436281 7.29e-01 100 chrXIII:297396-297759 3.11e-01 100 chrXVI:520208-520496 3.65e-03 30_[-3(5.96e-05)]_16_[+3(1.87e-05)]_\ 26 chrII:45014-45326 1.40e-03 48_[+3(1.03e-06)]_5_[-3(2.21e-06)]_\ 19 chrXV:900070-900414 9.89e-01 100 chrVII:807088-807432 4.88e-01 100 chrXV:506545-506889 6.31e-01 100 chrXII:845195-845539 2.91e-01 100 chrXII:499386-499553 9.98e-01 100 chrXV:409618-409962 9.99e-01 100 chrXI:283205-283549 9.61e-01 100 chrVII:856769-856935 1.33e-04 61_[-3(5.37e-06)]_25 chrIV:434053-434575 3.24e-13 10_[+2(3.49e-10)]_8_[+1(9.38e-11)]_\ 36 chrV:6188-6543 3.09e-04 32_[+3(2.78e-08)]_54 chrXV:35-216 3.27e-05 10_[+3(2.78e-08)]_76 chrVII:148600-148944 2.16e-01 100 chrVII:541617-542165 6.52e-10 43_[-2(6.62e-13)]_31 chrIV:1302013-1302357 5.24e-01 100 chrXVI:775669-776005 6.48e-01 100 chrVII:533959-534071 9.55e-01 100 chrXIV:241407-241687 1.67e-02 64_[+3(1.62e-05)]_22 chrXIV:62559-62903 8.40e-01 100 chrXI:308063-308379 1.63e-04 18_[+1(4.11e-08)]_62 chrXIII:289563-289907 6.47e-01 100 chrIX:439104-439286 7.03e-01 100 chrXV:594230-594622 1.70e-01 100 chrV:269151-269495 8.31e-01 100 chrXII:1019021-1019364 4.19e-02 [-3(4.05e-05)]_10_[-3(8.51e-05)]_62 chrXV:680477-680821 9.67e-01 100 chrVIII:451027-451371 9.94e-01 100 chrI:143304-143509 6.38e-01 100 chrIV:525178-525291 4.50e-04 18_[-3(1.47e-07)]_68 chrXII:522180-522416 4.54e-03 28_[+3(1.27e-05)]_11_[+3(9.13e-07)]_\ 33 chrVII:412199-412568 1.66e-04 6_[+1(4.11e-08)]_74 chrXII:522600-522944 5.73e-01 100 chrVIII:115984-116356 3.65e-07 31_[+1(9.38e-11)]_49 chrXIV:716445-716789 3.58e-01 100 chrXI:578834-579208 3.17e-12 1_[-1(3.02e-08)]_31_[-2(7.15e-11)]_\ 22 chrXV:33498-33842 6.22e-01 100 chrIII:142630-142948 5.37e-02 4_[+1(9.34e-05)]_76 chrVIII:34961-35109 7.77e-01 100 chrIV:125341-125685 2.83e-04 14_[-3(1.29e-06)]_72 chrXII:903501-903598 7.18e-03 19_[+3(2.71e-06)]_64 chrV:140462-140832 3.63e-03 77_[-3(2.21e-06)]_9 chrV:102292-102636 4.43e-01 100 chrXIII:259061-259446 6.57e-06 8_[+1(7.57e-10)]_72 chrXV:738810-739154 7.50e-01 100 chrXIV:718203-718547 7.76e-01 100 chrII:604152-604479 3.50e-03 18_[+3(3.08e-05)]_2_[+3(1.09e-05)]_\ 52 chrXII:818450-818746 6.42e-02 100 chrXI:141556-141900 8.42e-01 100 chrXIV:96092-96480 8.98e-08 15_[+2(6.45e-10)]_59 chrXII:233285-233629 7.91e-02 100 chrXV:92975-93390 2.56e-01 100 chrIX:99677-99989 2.44e-02 26_[-3(1.50e-05)]_60 chrIV:359371-359856 3.17e-12 21_[-1(3.02e-08)]_31_[-2(7.15e-11)]_\ 2 chrIV:1359401-1359768 4.60e-03 60_[+3(6.34e-07)]_1_[+3(1.09e-05)]_\ 11 chrVII:476287-476631 8.43e-01 100 chrII:256605-256949 6.79e-01 100 chrX:663916-664016 1.17e-01 100 chrM:60747-60931 9.60e-01 100 chrXII:796979-797371 1.44e-01 100 chrXII:673818-674237 3.66e-03 75_[+3(1.44e-06)]_11 chrXI:74464-74829 1.05e-10 35_[-1(2.54e-09)]_9_[-2(1.32e-08)]_\ 10 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54_[-2(5.90e-08)]_20 chrVII:661555-661889 6.69e-01 100 chrXII:445226-445570 4.82e-01 100 chrXVI:433401-433745 8.45e-01 100 chrXIII:163496-163840 9.70e-01 100 chrX:390908-391008 1.47e-06 10_[+2(1.86e-08)]_8_[+1(2.42e-05)]_\ 36 chrM:6692-7036 9.46e-01 100 chrIV:117157-117555 8.41e-04 62_[+3(4.04e-06)]_24 chrII:165146-165348 1.27e-02 58_[+3(4.94e-05)]_28 chrV:269351-269695 7.55e-01 100 chrVII:544415-544816 1.02e-05 22_[+2(7.96e-09)]_52 chrXIII:352111-352408 9.23e-06 78_[-1(3.81e-08)]_2 chrIV:83397-83662 2.21e-02 76_[-1(9.34e-05)]_4 chrXII:638428-638772 6.29e-01 100 chrXVI:188661-188906 3.69e-05 10_[-1(7.12e-05)]_25_[+3(1.81e-06)]_\ 31 chrXV:226508-226844 6.23e-02 27_[+1(9.34e-05)]_53 chrVIII:148965-149257 6.35e-04 20_[-3(1.03e-06)]_66 chrV:165270-165614 9.30e-01 100 chrXV:340149-340590 3.11e-05 24_[+1(4.11e-08)]_56 chrVII:497183-497527 9.74e-01 100 chrX:355149-355249 4.59e-01 100 chrXV:300888-301352 5.86e-02 100 chrIII:128065-128409 7.45e-01 100 chrXII:922175-922539 1.75e-03 10_[+3(2.17e-05)]_12_[+3(1.62e-06)]_\ 50 chrV:301600-301944 8.87e-01 100 chrV:423137-423435 7.42e-03 34_[+3(2.21e-06)]_52 chrV:435673-436010 1.52e-05 5_[+1(7.03e-09)]_75 chrIX:197419-197709 9.88e-01 100 chrXV:445681-446025 9.40e-01 100 chrVII:185644-185946 5.33e-05 13_[+1(7.03e-09)]_67 chrXII:489332-489526 5.51e-03 19_[-1(1.58e-05)]_61 chrII:605751-606088 5.47e-03 45_[+3(1.44e-06)]_41 chrVII:319597-319995 3.01e-05 69_[-2(1.74e-08)]_5 chrXV:622745-623089 6.48e-01 100 chrIX:248665-248978 3.03e-01 100 chrXIV:230566-230910 9.85e-01 100 chrIV:308029-308379 3.56e-03 48_[+3(5.26e-05)]_6_[+3(1.27e-05)]_\ 18 chrXVI:655421-655765 8.02e-01 100 chrXII:731877-732262 7.89e-06 78_[-1(1.75e-09)]_2 chrIV:946155-946556 2.42e-04 14_[-1(5.41e-05)]_24_[-2(3.61e-06)]_\ 16 chrII:9411-9712 4.29e-05 79_[-1(3.81e-08)]_1 chrXVI:282335-282679 6.00e-01 100 chrXIII:168578-169052 4.92e-02 37_[-1(5.41e-05)]_43 chrIV:356588-356932 7.41e-01 100 chrVII:365109-365251 4.10e-01 100 chrV:250124-250523 1.72e-07 47_[-2(1.05e-09)]_27 chrXIII:145894-146255 8.25e-06 58_[+3(7.56e-08)]_28 chrV:321936-322280 4.85e-01 100 chrXIII:535450-535794 8.77e-01 100 chrXV:738363-738707 9.31e-01 100 chrV:438508-438903 1.71e-04 52_[-1(4.11e-08)]_28 chrXV:216273-216628 4.12e-03 49_[+3(2.45e-06)]_10_[+3(3.31e-05)]_\ 13 chrXII:639994-640117 9.97e-01 100 chrII:6440-6565 8.91e-01 100 chrXVI:404594-404765 2.63e-05 75_[+3(4.73e-08)]_11 chrXI:591418-591762 2.30e-01 100 chrIV:306647-306991 8.39e-01 100 chrV:267956-268300 2.63e-01 100 chrXIII:297860-298341 9.48e-01 100 chrVII:663072-663416 8.53e-01 100 chrVI:83968-84312 2.37e-01 100 chrXII:233491-233835 7.20e-01 100 chrI:151440-151784 5.42e-01 100 chrXV:779729-780232 7.61e-01 100 chrXII:44127-44471 5.59e-01 100 chrV:362958-363302 8.53e-01 100 chrIV:1236831-1237175 7.42e-01 100 chrX:675913-676013 5.94e-01 100 chrVII:609523-609867 9.92e-01 100 chrVIII:103914-104262 1.27e-01 17_[+3(9.52e-05)]_69 chrIV:1075326-1075679 1.09e-05 30_[+2(5.01e-09)]_44 chrX:374467-374567 6.15e-01 100 chrXIII:550812-551156 7.98e-01 100 chrV:61638-62168 2.88e-10 47_[+2(9.88e-12)]_6_[+1(9.34e-05)]_\ 1 chrIV:1095193-1095634 1.83e-10 17_[+2(4.62e-09)]_27_[+1(3.81e-08)]_\ 10 chrXII:687789-688125 1.32e-01 5_[+1(9.97e-05)]_75 chrXV:154965-155309 7.73e-01 100 chrVII:883823-883916 5.28e-01 93 chrXV:968202-968307 8.26e-05 25_[-1(9.34e-05)]_19_[-3(3.63e-06)]_\ 22 chrXII:199369-199598 9.12e-01 100 chrVII:786941-787285 4.87e-01 100 chrXI:309586-309930 9.78e-01 100 chrIII:123484-123789 4.70e-10 1_[+2(1.11e-12)]_73 chrVII:759-951 2.91e-01 100 chrXII:638928-639272 9.24e-01 100 chrIV:217797-218141 9.54e-01 100 chrXV:505114-505476 1.12e-03 47_[+3(3.28e-06)]_11_[+3(2.21e-06)]_\ 14 chrIV:130625-130967 1.39e-03 2_[-3(1.16e-06)]_84 chrXIV:434555-434899 2.62e-03 23_[+3(4.48e-06)]_63 chrIV:679-785 4.74e-01 100 chrXII:729414-729758 8.16e-01 100 chrXIV:63134-63571 1.14e-02 15_[-3(3.63e-06)]_71 chrVII:845474-845860 5.67e-09 39_[-1(9.34e-05)]_6_[-2(9.88e-12)]_\ 9 chrV:176904-177278 7.43e-01 100 chrVII:255379-255723 3.88e-02 100 chrXIV:631778-632086 2.10e-02 100 chrXII:167826-168203 5.14e-06 33_[+1(7.57e-10)]_47 chrVII:601108-601452 9.46e-01 100 chrVII:405309-405712 4.53e-07 44_[-2(1.02e-10)]_30 chrI:81964-82216 2.68e-04 69_[-3(1.97e-07)]_17 chrXII:710594-710938 7.17e-04 15_[+3(1.28e-07)]_71 chrX:424397-424497 5.72e-01 100 chrIV:1525345-1525603 9.55e-04 18_[-3(4.11e-07)]_68 chrVI:162040-162404 6.58e-02 63_[-1(9.34e-05)]_17 chrXVI:172766-173110 1.65e-03 42_[+3(5.88e-06)]_44 chrIV:331905-332249 8.75e-01 100 chrXIII:379202-379573 6.95e-02 51_[-2(4.68e-05)]_23 chrXI:159236-159580 9.93e-01 100 chrX:197239-197339 6.56e-01 100 chrVIII:307994-308338 1.26e-02 24_[-3(8.42e-06)]_62 chrXV:110845-111227 4.25e-01 100 chrII:167881-168183 4.49e-02 51_[+3(2.68e-05)]_3_[+3(6.73e-05)]_\ 18 chrXIV:282077-282421 9.44e-01 100 chrXIII:553025-553155 2.17e-03 31_[+3(4.48e-06)]_55 chrXVI:311518-311862 2.18e-01 100 chrXV:409819-410163 9.50e-01 100 chrV:441817-442484 5.66e-02 58_[-1(4.44e-05)]_22 chrIII:163471-163840 2.58e-04 41_[-3(2.97e-07)]_16_[-3(1.74e-05)]_\ 15 chrVII:823303-823656 8.40e-05 60_[-1(4.11e-08)]_20 chrIV:1256942-1257251 7.19e-02 100 chrXII:404106-404532 2.58e-01 100 chrVII:312023-312156 2.61e-01 100 chrXV:167963-168419 3.93e-03 46_[-3(2.98e-06)]_4_[+3(3.08e-05)]_\ 22 chrXIV:6584-6822 1.11e-05 10_[+3(2.78e-08)]_[+3(2.21e-06)]_62 chrIV:1352371-1352716 5.30e-05 17_[+1(7.03e-09)]_63 chrXI:618815-619181 6.92e-04 33_[+3(1.38e-05)]_15_[-3(6.48e-06)]_\ 24 chrVIII:236619-236963 9.83e-01 100 chrXV:89417-89761 7.77e-01 100 chrVIII:134125-134503 8.23e-03 100 chrIX:254890-255234 9.79e-01 100 chrXV:438469-438937 2.82e-08 48_[-2(7.15e-11)]_26 chrV:138494-138899 3.91e-07 54_[-2(1.02e-10)]_20 chrIV:1163971-1164315 7.34e-03 100 chrX:413909-414009 5.63e-01 100 chrVI:83128-83231 2.69e-01 100 chrVI:221774-222066 2.83e-03 49_[-3(1.81e-06)]_37 chrXV:725388-725732 8.30e-02 100 chrIV:118548-118662 8.90e-01 100 chrVII:730958-731367 1.05e-10 32_[-1(2.54e-09)]_9_[-2(1.32e-08)]_\ 13 chrX:517705-517805 3.25e-01 100 chrXIV:330815-331096 1.24e-02 43_[+3(3.28e-06)]_43 chrVIII:237707-238147 2.71e-05 34_[+1(3.81e-08)]_46 chrV:397570-397914 7.23e-01 100 chrIX:316140-316556 1.40e-02 52_[+3(5.37e-06)]_34 chrXI:202831-203146 4.20e-05 68_[-1(7.03e-09)]_12 chrIV:1403053-1403272 8.73e-01 100 chrVII:328400-328864 6.52e-10 35_[-2(6.62e-13)]_39 chrXV:978051-978395 9.28e-01 100 chrXIV:575385-575613 3.04e-01 100 chrI:72410-72754 1.28e-02 100 chrXIII:733253-733450 8.65e-01 100 chrVI:226557-226907 6.10e-13 16_[+2(3.83e-11)]_8_[+1(7.03e-09)]_\ 30 chrX:139653-139753 1.46e-01 100 chrVIII:385100-385444 3.19e-01 100 chrXIII:183767-184124 5.67e-09 13_[+2(9.88e-12)]_6_[+1(9.34e-05)]_\ 35 chrXIII:550051-550160 9.67e-01 100 chrV:110565-110808 3.00e-03 40_[+3(5.61e-07)]_46 chrVI:157780-158193 9.35e-05 4_[+1(8.73e-05)]_19_[+1(3.81e-08)]_\ 37 chrVII:205347-205698 1.29e-05 56_[-1(2.37e-08)]_24 chrXI:490788-491096 7.52e-01 100 chrVIII:125956-126270 7.49e-04 37_[+3(1.97e-07)]_[+3(7.57e-05)]_35 chrIV:1201567-1201997 6.10e-13 25_[-1(7.03e-09)]_8_[-2(3.83e-11)]_\ 21 chrIV:1228963-1229307 6.40e-01 100 chrIX:28-179 4.96e-03 11_[+3(2.17e-05)]_75 chrXV:677992-678336 5.70e-01 100 chrVII:738924-739252 6.43e-01 100 chrIII:127554-127861 1.54e-05 66_[-1(2.54e-09)]_14 chrXII:950996-951340 7.82e-01 100 chrI:180972-181430 1.88e-02 66_[-2(8.65e-05)]_8 chrXIII:872662-873006 1.36e-01 100 chrXII:265538-265882 6.51e-01 100 chrIV:322419-322763 2.43e-01 100 chrVII:149147-149499 3.08e-03 44_[-3(3.42e-07)]_42 chrX:115796-115896 6.52e-10 14_[+2(6.62e-13)]_60 chrXII:796434-796881 6.27e-03 26_[-3(2.71e-06)]_60 chrVIII:352794-353138 5.33e-01 100 chrVIII:132907-133329 2.21e-06 11_[+1(7.57e-10)]_69 chrXVI:302649-302975 7.90e-03 65_[+3(2.01e-06)]_21 chrVII:278458-278802 3.67e-01 100 chrXVI:856738-857067 6.30e-08 57_[-1(2.46e-10)]_23 chrXII:48697-49075 1.30e-02 66_[-3(2.71e-06)]_20 chrIV:491518-491862 9.44e-01 100 chrXVI:407682-408026 3.45e-01 100 chrII:557956-558300 5.35e-01 100 chrX:378177-378277 9.37e-05 55_[-1(4.11e-08)]_25 chrV:117991-118278 8.47e-01 100 chrXIII:808102-808518 2.77e-02 100 chrX:702693-702793 9.08e-01 100 chrXII:819507-819851 7.02e-01 100 chrV:396215-396547 1.30e-03 46_[+3(4.11e-07)]_4_[+3(2.01e-05)]_\ 22 chrXIV:102533-102908 8.90e-06 53_[-1(2.54e-09)]_27 chrXII:241615-241994 7.19e-04 51_[+3(8.03e-07)]_7_[+3(4.48e-06)]_\ 14 chrXI:108730-109066 3.23e-03 53_[+3(3.31e-05)]_4_[+3(6.34e-07)]_\ 15 chrXV:842520-842864 5.43e-02 70_[-1(6.64e-05)]_10 chrVII:311219-311516 9.97e-01 100 chrVI:210585-210878 8.19e-01 100 chrII:226884-227288 6.45e-06 46_[-1(7.57e-10)]_34 chrV:362186-362473 1.72e-02 69_[+3(2.17e-05)]_17 chrXII:282521-282848 5.95e-03 21_[+3(1.44e-06)]_3_[+3(2.33e-05)]_\ 48 chrIV:992603-992958 9.56e-01 100 chrXI:284416-284760 3.92e-01 100 chrXVI:352291-352635 9.63e-01 100 chrXIV:104637-105098 3.19e-06 23_[-2(3.49e-10)]_51 chrIX:324190-324533 1.02e-05 2_[+2(7.96e-09)]_72 chrIX:174875-175284 3.24e-13 9_[-1(9.38e-11)]_8_[-2(3.49e-10)]_\ 37 chrXII:243309-243653 9.91e-01 100 chrVIII:411261-411488 7.90e-01 100 chrV:303210-303306 5.94e-01 96 chrVI:5355-5699 7.16e-01 100 chrXII:838102-838291 5.13e-02 14_[-2(9.15e-05)]_60 chrXVI:810434-810872 6.11e-06 80_[-1(2.54e-09)] chrIV:488528-489044 1.32e-05 71_[+2(1.42e-08)]_3 chrXII:656808-657172 2.66e-13 4_[+2(9.09e-11)]_8_[+1(2.46e-10)]_\ 42 chrIV:358134-358415 8.79e-03 24_[-3(1.29e-06)]_62 chrI:229493-229645 3.33e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************