Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.106527 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.070596 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.102101 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.028985 Invoking: fasta-subsample /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/seqs-centered 600 -rest /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/seqs-discarded -seed 1 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/seqs-sampled Finished invoke: name: sample_seqs status: 0 time: 0.072312 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background Finished invoke: name: bg status: 0 time: 0.010948 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 958.141183 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/seqs-shuffled Finished invoke: name: dreme status: 0 time: 98.760592 Invoking: centrimo -seqlen 364 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.245671 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.528303 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background -primary MDMBSGGRRTCGAACCSVKGAYCTYCHGRT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.595647 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background -primary RNSSCTYWAMCVACTNGGCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.643587 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background -primary HACAYCCRTACAYC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.538679 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background -primary CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.368217 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background -primary GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.306573 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background -primary AAAAADA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.503441 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background -primary ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.323146 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background -primary CTATCACR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.706757 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background -primary GRAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.541279 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background -primary AGARTCAT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.491274 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background -primary CSACTAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.249241 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background -primary CCACRCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.31458 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background -primary AGATCGKG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.295865 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background -primary GATATTTY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.250408 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/spamo_out_15 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background -primary ATGGGYGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml Finished invoke: name: spamo15 status: 0 time: 0.27149 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background --motif MDMBSGGRRTCGAACCSVKGAYCTYCHGRT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa Finished invoke: name: fimo1 status: 0 time: 0.253907 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background --motif RNSSCTYWAMCVACTNGGCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa Finished invoke: name: fimo2 status: 0 time: 0.252646 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background --motif HACAYCCRTACAYC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa Finished invoke: name: fimo3 status: 0 time: 0.250814 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background --motif CGCSTTA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa Finished invoke: name: fimo4 status: 0 time: 0.163135 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background --motif GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa Finished invoke: name: fimo5 status: 0 time: 0.148281 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background --motif AAAAADA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa Finished invoke: name: fimo6 status: 0 time: 0.134801 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background --motif ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa Finished invoke: name: fimo7 status: 0 time: 0.149645 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background --motif CTATCACR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa Finished invoke: name: fimo8 status: 0 time: 0.152923 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background --motif GRAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa Finished invoke: name: fimo9 status: 0 time: 0.127806 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background --motif AGARTCAT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa Finished invoke: name: fimo10 status: 0 time: 0.153581 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background --motif CSACTAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa Finished invoke: name: fimo11 status: 0 time: 0.152185 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background --motif CCACRCG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa Finished invoke: name: fimo12 status: 0 time: 0.160638 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background --motif AGATCGKG /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa Finished invoke: name: fimo13 status: 0 time: 0.146167 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background --motif GATATTTY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa Finished invoke: name: fimo14 status: 0 time: 0.15804 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/fimo_out_15 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/background --motif ATGGGYGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/BY4741--SRB8.fa Finished invoke: name: fimo15 status: 0 time: 0.144978 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--SRB8/summary.tsv Finished invoke: name: summary status: 0 time: 0.22414 Done