Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.03306 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.056471 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.077594 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.017987 Invoking: fasta-subsample /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/seqs-centered 600 -rest /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/seqs-discarded -seed 1 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/seqs-sampled Finished invoke: name: sample_seqs status: 0 time: 0.068314 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background Finished invoke: name: bg status: 0 time: 0.015077 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 909.905648 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/seqs-shuffled Finished invoke: name: dreme status: 0 time: 68.891177 Invoking: centrimo -seqlen 430 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.195311 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.388761 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background -primary GGCCVAGTKGKTWARGSSNHM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.445453 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background -primary CYCHCDMBSGGRDTCGAACCSVKGAYC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.441954 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background -primary ACAYCCRTACAYY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.344181 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background -primary CCWTAACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.247592 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background -primary GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.230338 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background -primary CCACTAHA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.213574 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background -primary GTTRCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.234439 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background -primary AKAAAAAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.293473 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background -primary AGACCAY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.247663 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background -primary GGAGASC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.244964 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background -primary CGTGYTAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.231504 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background -primary TGGCGYA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.251323 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background -primary AMTCCGAT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.251615 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background -primary CTATCACR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.215547 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background --motif GGCCVAGTKGKTWARGSSNHM /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa Finished invoke: name: fimo1 status: 0 time: 0.228226 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background --motif CYCHCDMBSGGRDTCGAACCSVKGAYC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa Finished invoke: name: fimo2 status: 0 time: 0.230524 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background --motif ACAYCCRTACAYY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa Finished invoke: name: fimo3 status: 0 time: 0.215827 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background --motif CCWTAACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa Finished invoke: name: fimo4 status: 0 time: 0.164361 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background --motif GCKCTACC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa Finished invoke: name: fimo5 status: 0 time: 0.156116 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background --motif CCACTAHA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa Finished invoke: name: fimo6 status: 0 time: 0.16682 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background --motif GTTRCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa Finished invoke: name: fimo7 status: 0 time: 0.168274 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background --motif AKAAAAAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa Finished invoke: name: fimo8 status: 0 time: 0.168471 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background --motif AGACCAY /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa Finished invoke: name: fimo9 status: 0 time: 0.164147 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background --motif GGAGASC /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa Finished invoke: name: fimo10 status: 0 time: 0.167592 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background --motif CGTGYTAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa Finished invoke: name: fimo11 status: 0 time: 0.156266 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background --motif TGGCGYA /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa Finished invoke: name: fimo12 status: 0 time: 0.163512 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background --motif AMTCCGAT /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa Finished invoke: name: fimo13 status: 0 time: 0.162106 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/background --motif CTATCACR /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/BY4741--RIM101.fa Finished invoke: name: fimo14 status: 0 time: 0.154628 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/aa_results/BY4741--RIM101/summary.tsv Finished invoke: name: summary status: 0 time: 0.24205 Done